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Marker Overview
Name | BNL1438 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL1438_orig
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Source Type | genomic |
Repeat Motif | (AG)13 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL1438_F: CATCACCATGGAACGAAAGA |
Primer 2 | BNL1438_R: TGCCATCTTACCCATTCCTC |
Polymorphism | P_ BNL1438 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch13_At.13 | N/A | 84.5 | BNL1438 | View |
2 | Emian-22 x 3-79, BC1 (2011) | AD_ch13_At.13 | N/A | 121.08 | BNL1438 | View |
3 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch13_At.13 | N/A | 147 | BNL1438 | View |
4 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch13_At.13 | N/A | 92.01 | BNL1438 | View |
5 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch13_At.13 | N/A | 24.4 | BNL1438 | View |
6 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch13_At.13 | N/A | 52.3 | BNL1438 | View |
7 | AD-genome wide Reference Map (2009) | AD_ch13_At.13 | N/A | 188 | BNL1438 | View |
8 | H18 x TM-1, F2 (2005) | AD_ch13_At.13 | N/A | 81 | BNL1438 | View |
9 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch13_At.13 | N/A | 102.8 | BNL1438 | View |
10 | SG 747 x Giza 75, BIL (2013) | AD_ch13_At.13 | N/A | 35.9 | BNL1438 | View |
11 | Monsanto SSR Bin Map, (2009) | AD_ch13_At.13 | N/A | 81 | BNL1438 | View |
12 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch13_At.13 | N/A | 51.9 | BNL1438b | View |
13 | TM-1 x Hai-7124, BC1 (2008) | AD_ch13_At.13 | N/A | 61.18 | BNL1438-120 | View |
14 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch13_At.13 | N/A | 40.6 | BNL1438-120 | View |
15 | TM-1 x Hai-7124, BC1 (2007) | AD_ch13_At.13 | N/A | 60.9 | BNL1438-120 | View |
16 | TM-1 x Hai-7124, BC1 (2012) | AD_ch13_At.13 | N/A | 76.3 | BNL1438-120 | View |
17 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch13_At.13 | N/A | 34.9 | BNL1438 | View |
Sequence
>BNL1438 ID=BNL1438; Name=BNL1438; organism=Gossypium hirsutum; type=genetic_marker; length=116bp CATCACCATGGAACGAAAGAGATGTTAATTAATGTAACTAAAACTTATGA AGGTAGAAGGGAAAGAGAGAGAGAGAGAGAGAGAGAGAATATTTGAGAGG AATGGGTAAGATGGCA
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