pAR0624, pAR0624 (genetic_marker) Gossypium hirsutum

Marker Overview


Name	pAR0624
Genbank ID	CA993232
Type	RFLP
Species	Gossypium hirsutum
Germplasm	T-25
Source Type	cDNA
Restriction Enzyme	EcoR1; Xho1
Publication	[view all]

Cross References

External references for this genetic_marker


Database	Accession
DB:genbank	CA993232

Publications


Year	Publication
2004	Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417.

Germplasm


Stock Name	Type
T-25	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	CAMD-E x Seaberry, F2 (1998)	AD_ch16_Dt.07	N/A	104.2	pAR0624	View
2	Deltapine-61 x Seaberry, F2 (2000)	AD_ch16_Dt.07	N/A	64.9	pAR0624	View
3	Pima S-7 x Empire, F2 (2007)	AD_ch09_At.09	N/A	6	pAR0624	View
4	AD-genome wide Reference Map (2009)	AD_ch09_At.09	N/A	203	pAR0624	View
5	Sic'on x F-177, F2 (2004)	AD_ch07_At.07	N/A	34	pAR0624	View
6	AD-genome wide Reference Map (2009)	AD_ch16_Dt.07	N/A	98	pAR0624	View
7	AD-genome wide Reference Map (2009)	AD_ch07_At.07	N/A	162	pAR0624	View
8	Palmeri x K-101, F2 (2007)	AD_ch07_At.07	N/A	169.2	pAR624a	View
9	Palmeri x K-101, F2 (2007)	AD_ch16_Dt.07	N/A	91.4	pAR624b	View

Sequence

>pAR0624 ID=pAR0624; Name=pAR0624; organism=Gossypium hirsutum; type=genetic_marker; length=188bp
AAACTATTAGCAAGTTTAAATTATTGTCACTCAACTTCAAAAGGTTACAA
AATGATCGCTCGACTACTTAAAAATTTTTATTTAAGTCACTAGACAGTCG
ATTTTTTTTTAATTCAGCTAGAGAGCTCCAAGCGATGATTCGACAATTAG
TATAGTGAATCAACACCTATTAATAAGTAGACTCGTGC

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pAR0624, pAR0624 (genetic_marker) Gossypium hirsutum