-- G. barbadense HGS_v1.1 CDs (108,363)

Human-Readable Name-- G. barbadense HGS_v1.1 CDs (108,363)
Database Path/mainlab/web/temp/db/cottongen/G.barbadense_HGS-AD2_v1.1.cds.fas
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseCottonGen Database
RegEx/^(\S+).*/
Link-out Typelink

-- G. barbadense HGS_v1.1 proteins (108,363)

Human-Readable Name-- G. barbadense HGS_v1.1 proteins (108,363)
Database Path/mainlab/web/temp/db/cottongen/G.barbadense_HGS-AD2_v1.1.pep.faa
Database Typeprotein
FASTA Header Formatdefault
External DatabaseJBrowse for AD2_HGS_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse

Cotton Cluster File Request

Submitted by Anonymous (not verified) on Thu, 11/14/2019 - 04:28
Name: 
Joellen Hackney
Email Address: 
Hohenweg 68
Email Address: 
Hohenweg 68
Organization: 
Hackney & Hackney AG
Acknowledgement: 
0
Acknowledgement4: 
0

Whole genome sequences of AD4 and G2 available (11/5/19)

Gossypium mustelinum (AD4) and Gossypium australe (G2) genome sequences were recently added.

New germplasm, pedigrees and descriptions available (10/19)

1956 new germplasm, 1648 new pedigrees, and 1700 germplasm descriptions added to CottonGen recently.

2018 Regional Breeders Trial Fiber Quality Data available (10/19)

5,040 new fiber trait scores (24 verities were tested at 14 different locations for 15 fiber quality traits) from 2018 Regional Breeders Testing Network (RBTN) available. 

G. australe CRI_v1.1 Genome (13 chrom. and 551 scaffolds)

Human-Readable NameG. australe CRI_v1.1 Genome (13 chrom. and 551 scaffolds)
Database Path/mainlab/web/temp/db/cottongen/G.australe_CRI-G2_v1.1_genome.fasta
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for G2_CRI_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse

-- G. australe CRI_v1.1 CDs (38,281)

Human-Readable Name-- G. australe CRI_v1.1 CDs (38,281)
Database Path/mainlab/web/temp/db/cottongen/G.australe_CRI-G2_v1.1.cds.fas
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for G2_CRI_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse

-- G. australe CRI_v1.1 proteins (38,281)

Human-Readable Name-- G. australe CRI_v1.1 proteins (38,281)
Database Path/mainlab/web/temp/db/cottongen/G.australe_CRI-G2_v1.1.pep.faa
Database Typeprotein
FASTA Header Formatdefault
External DatabaseJBrowse for G2_CRI_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse

Two new AD1 genome (CRI-TM1 and CRI-ZM24) available (9/12/19)

Two new AD1 genomes, TM-1 and Zhong Mian Suo 24, are available. These genomes sequenced by China Cotton Research Institute (CRI).