Three BIMS How-to Use videos available (4/25)

Three new How-to Use BIMS videos are available at CottonGen. Click the link below to view:

HAU 50 genomes' assembly and annotation data downloadable (4/25)

HAU's 50 genomes' (15 G. arboreum and 35 G. hirsutum) assembly and annotation data are available at CottonGen.

The 2025 Election for ICGI Officers Starts (4/2/25)

Per ICGI bylaws, elections for the ICGI overall and Workgroup Co-Chairs will be held biennially.

-- G. hirsutum (AD1) 'TM-1' UTX v3.1 proteins (109,792)

Human-Readable Name-- G. hirsutum (AD1) 'TM-1' UTX v3.1 proteins (109,792)
Database Path/mainlab/web/temp/db/cottongen/AD1_TM1-UTX_v3.1.protein.blast.fasta
Database Typeprotein
FASTA Header Formatdefault
External DatabaseCottonGen Database
RegEx/^(\S+).*/
Link-out Typelink

-- G. hirsutum (AD1) 'TM-1' UTX v3.1 CDs (109,792)

Human-Readable Name-- G. hirsutum (AD1) 'TM-1' UTX v3.1 CDs (109,792)
Database Path/mainlab/web/temp/db/cottongen/AD1_TM1-UTX_v3.1.CDS.blast.fasta
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseCottonGen Database
RegEx/^(\S+).*/
Link-out Typelink

G. hirsutum (AD1) 'TM-1' UTX v3.1 Genome (26 chrom. 223 scaffolds)

Human-Readable NameG. hirsutum (AD1) 'TM-1' UTX v3.1 Genome (26 chrom. 223 scaffolds)
Database Path/mainlab/web/temp/db/cottongen/AD1_TM1-UTX_v3.1.genomic.blast.fa
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for AD1_TM1-UTX_v3.1
RegEx/^(\S+).*/
Link-out Typejbrowse