G. hirsutum TM1-CRI v1.0 Genome (26 chrom. and 584 scaffolds)

Human-Readable NameG. hirsutum TM1-CRI v1.0 Genome (26 chrom. and 584 scaffolds)
Database Path/mainlab/web/temp/db/cottongen/G.hirsutum_CRI_TM1-v1.fa
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for Gh_ZM24_CRI_v1
RegEx/^(\S+).*/
Link-out Typejbrowse

-- G. hirsutum TM1-CRI v1.0 proteins (79,703)

Human-Readable Name-- G. hirsutum TM1-CRI v1.0 proteins (79,703)
Database Path/mainlab/web/temp/db/cottongen/G.hirsutum_CRI_TM1-v1.pep.faa
Database Typeprotein
FASTA Header Formatdefault
External DatabaseCottonGen Database
RegEx/^(\S+).*/
Link-out Typelink

-- G. hirsutum TM1-CRI v1.0 CDs (79,703)

Human-Readable Name-- G. hirsutum TM1-CRI v1.0 CDs (79,703)
Database Path/mainlab/web/temp/db/cottongen/G.hirsutum_CRI_TM1-v1.cds.fas
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseCottonGen Database
RegEx/^(\S+).*/
Link-out Typelink

About the assembly

The WGS assembly of Gossypium mustelinum v1.1 was isolated from '1408120.09' with 94.12x of the genome coverage.  The data was submitt... [more]

Resource Titles: 
Assembly
Genes
Downloads
Resource Blocks: 

The chromosomes (pseudomolecules) for Gossypium mustelinum genome. These files belong to the JGI Assembly v1.1

Chromosomes (FASTA format) G.mustelinum_JGI-AD4_assembly_v1.1.fa.gz

The predicted gene model, their alignments and proteins for G. mustelinum genome. These files belong to the JGI-AD4 Assembly v1.1

Predicted gene models with exons (GFF3 format) G.mustelinum_JGI-AD4_v1.1_protein_gff.gz
Protein sequences (FASTA format) G.mustelinum_JGI-AD4_v1.1_protein.fasta.gz

All annotation files are available for download by selecting the desired data type in the left-hand "Resources" side bar.  Each data type page will provide a description of the available files and links do download.  Alternatively, you can use the FTP repository for bulk download.

-- G. hirsutum ZM24-CRI v1.0 CDs (99,706)

Human-Readable Name-- G. hirsutum ZM24-CRI v1.0 CDs (99,706)
Database Path/mainlab/web/temp/db/cottongen/G.hirsutum_CRI_ZM24-v1.cds.fas
Database Typenucleotide

-- G. hirsutum ZM24-CRI v1.0 proteins (99,706)

Human-Readable Name-- G. hirsutum ZM24-CRI v1.0 proteins (99,706)
Database Path/mainlab/web/temp/db/cottongen/G.hirsutum_CRI_ZM24-v1.pep.faa
Database Typeprotein
FASTA Header Formatdefault
External DatabaseCottonGen Database
RegEx/^(\S+).*/
Link-out Typelink

G. hirsutum ZM24-CRI v1.0 Genome (26 chrom. and 2,221 scaffolds)

Human-Readable NameG. hirsutum ZM24-CRI v1.0 Genome (26 chrom. and 2,221 scaffolds)
Database Path/mainlab/web/temp/db/cottongen/G.hirsutum_CRI_ZM24-v1.fa
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for Gh_ZM24_CRI_v1
RegEx/^(\S+).*/
Link-out Typejbrowse