Gm0007420.1

Transcript Overview
NameGm0007420.1
Unique NameGm0007420.1_HAU-AD3_v1
TypemRNA
OrganismGossypium tomentosum ()
Sequence length900
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D13chromosomeD13:12373445..12376205 +Gossypium tomentosum (AD3) genome HAU_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
a3ha3hL0624Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3ha3hL0755Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3ha3hL0995Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3ha3hL1903Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3ha3hR1949Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3ha3hR1966Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
a3hd3dR2160Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
a3hd3dR2197Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
a3hd3dR2219Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
a3hd3dR2222Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
a3hd3dR2227Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
a3hawR2167Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
a3hawR2170Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
a3hawR2175Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
a3hawR2199Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
a3hawR2200Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
a3hawR2213Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
a3hadR2137Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
a3hadR2142Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
a3hadR2159Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
a3hadR2198Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
a3hadR2202Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
a3hadR2207Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
a3hganR2068Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
a3hganR2080Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
a3hganR2102Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
a3hganR2123Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
a3hfnR2035Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
a3hfnR2039Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
a3hfnR2044Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
a3hfnR2066Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
a3hgauR1768Gossypium australe (G2) genome CRI_v1.1Gossypium australe
a3hgauR1773Gossypium australe (G2) genome CRI_v1.1Gossypium australe
a3hgauR1781Gossypium australe (G2) genome CRI_v1.1Gossypium australe
a3hgauR1813Gossypium australe (G2) genome CRI_v1.1Gossypium australe
a3hgauR1820Gossypium australe (G2) genome CRI_v1.1Gossypium australe
a3hgauR1842Gossypium australe (G2) genome CRI_v1.1Gossypium australe
a3hgkR1772Gossypioides kirkii genome ISU_v3Gossypioides kirkii
a3hgkR1778Gossypioides kirkii genome ISU_v3Gossypioides kirkii
a3hgkR1780Gossypioides kirkii genome ISU_v3Gossypioides kirkii
a3hgkR1791Gossypioides kirkii genome ISU_v3Gossypioides kirkii
a3hgkR1805Gossypioides kirkii genome ISU_v3Gossypioides kirkii
a3hgkR1812Gossypioides kirkii genome ISU_v3Gossypioides kirkii
a3hgkR1833Gossypioides kirkii genome ISU_v3Gossypioides kirkii
a3hgosR2108Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
a3hgosR2110Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
a3hgosR2115Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
a3hgosR2136Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
a3hgosR2147Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
a3hgdR2363Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
a3hgdR2368Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
a3hgdR2390Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
a3hgdR2442Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
a3hgdR2448Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
a3hgrbR1959Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
a3hgrbR1963Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
a3hgrbR1965Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
a3hgrbR1986Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
a3hgrbR2001Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
a3hgroR2351Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
a3hgroR2364Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
a3hgroR2371Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
a3hgroR2402Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
a3hgroR2415Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
a3hgtbR2061Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
a3hgtbR2063Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
a3hgtbR2068Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
a3hgtbR2088Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
a3hgtbR2110Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
a3hgtiR2102Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
a3hgtiR2137Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
a3hgtiR2158Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
a3hgtiR2162Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
a3hgtiR2167Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
a3hgrhR2091Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
a3hgrhR2094Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
a3hgrhR2097Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
a3hgrhR2116Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
a3hgrhR2135Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
a3hhgsR2164Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
a3hhgsR2180Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
a3hhgsR2222Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
a3hhgsR2225Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
a3hhgsR2233Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
a3hhnR2828Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
a3hhnR2844Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
a3hhnR2899Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
a3hhnR2908Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
a3hhnR2919Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
a3hhwR2201Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
a3hhwR2204Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
a3hhwR2209Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
a3hhwR2238Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
a3hhwR2239Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
a3hhwR2245Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
a3htoR2144Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
a3htoR2162Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
a3htoR2200Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
a3htoR2204Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
a3htoR2214Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
a3huhR2122Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
a3huhR2136Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
a3huhR2175Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
a3huhR2179Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
a3huhR2185Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
a3hg2bR2633Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
a3hg2bR2655Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
a3hg2bR2708Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
a3hg2bR2712Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
a3hg2bR2722Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
a3hgbmR2575Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
a3hgbmR2581Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
a3hgbmR2603Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
a3hgbmR2656Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
a3hgbmR2659Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
a3hgbmR2667Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
a3hazbR2619Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
a3hazbR2626Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
a3hazbR2647Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
a3ha5zR2671Gossypium barbadense (AD2) 'AZB51' genome HAU_v1Gossypium barbadense
a3hazbR2699Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
a3ha5zR2694Gossypium barbadense (AD2) 'AZB51' genome HAU_v1Gossypium barbadense
a3hazbR2703Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
a3hazbR2713Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
a3ha5zR2744Gossypium barbadense (AD2) 'AZB51' genome HAU_v1Gossypium barbadense
a3ha5zR2749Gossypium barbadense (AD2) 'AZB51' genome HAU_v1Gossypium barbadense
a3ha5zR2757Gossypium barbadense (AD2) 'AZB51' genome HAU_v1Gossypium barbadense
a3hyumR2571Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
a3hyumR2577Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
a3hyumR2598Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
a3hyumR2654Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
a3hyumR2657Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
a3hyumR2666Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
a3hazkR2588Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
a3hazkR2594Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
a3hazkR2617Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
a3hazkR2669Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
a3hazkR2673Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
a3hazkR2682Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
a3ha6zR2596Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a3hg6bR2608Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
a3ha6zR2603Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a3ha6zR2624Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a3hg6bR2614Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
a3hg6bR2637Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
a3ha6zR2676Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a3ha6zR2679Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a3hg6bR2687Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
a3ha6zR2686Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
a3hg6bR2690Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
a3ha3zR2624Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3hg6bR2698Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
a3ha3zR2644Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3ha3zR2699Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3ha3zR2703Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3ha3zR2712Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
a3hg7bR2618Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
a3hg7bR2638Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
a3hg7bR2691Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
a3hg7bR2695Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
a3hg7bR2705Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
a3hj1hR2611Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
a3hj1hR2632Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
a3hj1hR2687Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
a3hj1hR2690Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
a3hj1hR2698Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
a3hcegR2631Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
a3hcegR2653Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
a3hcegR2704Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
a3hcegR2708Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
a3hcegR2717Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
a3hkocR2054Kokia cookei 'WAI 16c69' genome ISU_v1Kokia cookei
a3hkocR2059Kokia cookei 'WAI 16c69' genome ISU_v1Kokia cookei
a3hkocR2061Kokia cookei 'WAI 16c69' genome ISU_v1Kokia cookei
a3hkocR2096Kokia cookei 'WAI 16c69' genome ISU_v1Kokia cookei
a3hkocR2105Kokia cookei 'WAI 16c69' genome ISU_v1Kokia cookei
a3hkocR2148Kokia cookei 'WAI 16c69' genome ISU_v1Kokia cookei
a3hkoaR1997Kokia kauaiensis 'WAI 19s9' genome ISU_v1Kokia kauaiensis
a3hkoaR2002Kokia kauaiensis 'WAI 19s9' genome ISU_v1Kokia kauaiensis
a3hkoaR2007Kokia kauaiensis 'WAI 19s9' genome ISU_v1Kokia kauaiensis
a3hkoaR2032Kokia kauaiensis 'WAI 19s9' genome ISU_v1Kokia kauaiensis
a3hkoaR2038Kokia kauaiensis 'WAI 19s9' genome ISU_v1Kokia kauaiensis
a3hkoaR2080Kokia kauaiensis 'WAI 19s9' genome ISU_v1Kokia kauaiensis
a3hkodR1996Kokia drynarioides genome ISU_v1Kokia drynarioides
a3hkodR2001Kokia drynarioides genome ISU_v1Kokia drynarioides
a3hkodR2004Kokia drynarioides genome ISU_v1Kokia drynarioides
a3hkodR2028Kokia drynarioides genome ISU_v1Kokia drynarioides
a3hkodR2034Kokia drynarioides genome ISU_v1Kokia drynarioides

Orthologs
Gene/TranscriptAssemblySpecies
EVM0007129.1Gossypium davidsonii (D3d-8) genome CRI_v1Gossypium davidsonii
gene-E1A91_D13G085400v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Yuma.D13G000782.mRNA1Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
Kocoo.013G085600.1Kokia cookei 'WAI 16c69' genome ISU_v1Kokia cookei
JH1.A13G000794.mRNA1Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
Gohir.D13G074100.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gar13G09020Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
K101.A13G000798.mRNA1Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
gene-EPI10_031982-mRNA1Gossypium australe (G2) genome CRI_v1.1Gossypium australe
gene-E1A91_A13G082400v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
rna-gnl|WGS_VKGI|Godar.A13G083300.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
GB0776.A13G000802.mRNA1Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
rna-gnl|WGS:VKDL|Gobar.A13G079700.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
Gh_A13G0650Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
GB0666.A13G000760.mRNA1Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
GB0262.A13G000824.mRNA1Gossypium barbadense (AD2) 'AZB51' genome HAU_v1Gossypium barbadense
TURN.03g374750.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
Grai_13G008980.1Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
Grot_13G020400.1Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
GB0414.D13G000786.mRNA1Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
GB0776.D13G000800.mRNA1Gossypium barbadense (AD2) 'GB-0776' genome HAU_v1Gossypium barbadense
Gohir.A13G074000.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
GB0307.A13G000788.mRNA1Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
GB0333.D13G000795.mRNA1Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
CEG.A13G000811.mRNA1Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
CEG.D13G000787.mRNA1Gossypium barbadense (AD2) 'CEG' genome HAU_v1Gossypium barbadense
Ghe13G09000Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
D5.v1.pred_00019580-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
Gos0631780.1Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense
EVM0026198.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
GB0249.D13G000789.mRNA1Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
mikado.E13G2084.1Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
GB0333.A13G000817.mRNA1Gossypium barbadense (AD2) 'AZB375' genome HAU_v1Gossypium barbadense
mikado.F13G2470.1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
Yuma.A13G000821.mRNA1Gossypium barbadense (AD2) 'Yuma' genome HAU_v1Gossypium barbadense
GB0262.D13G000792.mRNA1Gossypium barbadense (AD2) 'AZB51' genome HAU_v1Gossypium barbadense
Kodry.013G080200.1Kokia drynarioides genome ISU_v1Kokia drynarioides
K101.D13G000787.mRNA1Gossypium barbadense (AD2) 'AZK101' genome HAU_v1Gossypium barbadense
GB0249.A13G000818.mRNA1Gossypium barbadense (AD2) 'GB249' genome HAU_v1Gossypium barbadense
JH1.D13G000761.mRNA1Gossypium barbadense (AD2) 'Junhai-1' genome HAU_v1Gossypium barbadense
GB0666.D13G000785.mRNA1Gossypium barbadense (AD2) 'GB-0660' genome HAU_v1Gossypium barbadense
rna-gnl|WGS_VKGI|Godar.D13G088100.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
GB0414.A13G000792.mRNA1Gossypium barbadense (AD2) 'AZB634' genome HAU_v1Gossypium barbadense
Kirkii_Juiced.00g367570.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
Kokau.013G084600.1Kokia kauaiensis 'WAI 19s9' genome ISU_v1Kokia kauaiensis
rna-gnl|WGS:VKDL|Gobar.D13G082500.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
GB0307.D13G000780.mRNA1Gossypium barbadense (AD2) 'AZB339' genome HAU_v1Gossypium barbadense
Goano.013G217600-1Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
Gos0107560.1Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1Gossypium barbadense

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-gnl|WGS_VKGE|Gotom.A13G086200.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
rna-gnl|WGS_VKGE|Gotom.D13G087700.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
Gm0234140.1Gossypium tomentosum (AD3) genome HAU_v1Gossypium tomentosum
Relationships

The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gm0007420.1-five_prime_UTR1Gm0007420.1-five_prime_UTR1-1660078161-5485Gossypium tomentosumfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gm0007420.1-CDS1Gm0007420.1-CDS1-1660078161-5486Gossypium tomentosumCDS
Gm0007420.1-CDS2Gm0007420.1-CDS2-1660078161-5487Gossypium tomentosumCDS
Gm0007420.1-CDS3Gm0007420.1-CDS3-1660078161-5488Gossypium tomentosumCDS
Gm0007420.1-CDS4Gm0007420.1-CDS4-1660078161-5489Gossypium tomentosumCDS
Gm0007420.1-CDS5Gm0007420.1-CDS5-1660078161-5490Gossypium tomentosumCDS
Gm0007420.1-CDS6Gm0007420.1-CDS6-1660078161-5491Gossypium tomentosumCDS
Gm0007420.1-CDS7Gm0007420.1-CDS7-1660078161-5492Gossypium tomentosumCDS
Gm0007420.1-CDS8Gm0007420.1-CDS8-1660078161-5493Gossypium tomentosumCDS
Gm0007420.1-CDS9Gm0007420.1-CDS9-1660078161-5494Gossypium tomentosumCDS
Gm0007420.1-CDS10Gm0007420.1-CDS10-1660078161-5495Gossypium tomentosumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Gm0007420.1-three_prime_UTR1Gm0007420.1-three_prime_UTR1-1660078161-5496Gossypium tomentosumthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Gm0007420.1Gm0007420.1_HAU-AD3_v1-proteinGossypium tomentosumpolypeptide
Gm0007420.1_HAU-AD3_v1Gm0007420.1_HAU-AD3_v1Gossypium tomentosumpolypeptide


Homology
BLAST of Gm0007420.1 vs. NCBI nr
Match: gb|TYH33851.1| (hypothetical protein ES332_D13G087700v1 [Gossypium tomentosum] >gb|TYI46134.1| hypothetical protein E1A91_D13G085400v1 [Gossypium mustelinum])

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 287/299 (95.99%), Postives = 287/299 (95.99%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK            TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK------------TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. NCBI nr
Match: ref|XP_016703793.1| (origin of replication complex subunit 6 isoform X1 [Gossypium hirsutum] >gb|KAG4110879.1| hypothetical protein ERO13_D13G074100v2 [Gossypium hirsutum])

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 286/299 (95.65%), Postives = 286/299 (95.65%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAV CLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK            TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVTCLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK------------TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. NCBI nr
Match: gb|KAB1994188.1| (hypothetical protein ES319_D13G082500v1 [Gossypium barbadense] >gb|PPD94978.1| hypothetical protein GOBAR_DD07985 [Gossypium barbadense] >gb|TYG36748.1| hypothetical protein ES288_D13G088100v1 [Gossypium darwinii])

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 286/299 (95.65%), Postives = 286/299 (95.65%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSII VGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK            TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIISVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK------------TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. NCBI nr
Match: ref|XP_012465456.1| (PREDICTED: origin of replication complex subunit 6 isoform X1 [Gossypium raimondii] >gb|KJB80102.1| hypothetical protein B456_013G084700 [Gossypium raimondii])

HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0
Identity = 285/299 (95.32%), Postives = 285/299 (95.32%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK            TKLDIRELGIQFGCVRLIPFVKK LSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIK------------TKLDIRELGIQFGCVRLIPFVKKGLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. NCBI nr
Match: gb|KAA3488211.1| (origin of replication complex subunit 6 isoform X1 [Gossypium australe])

HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0
Identity = 291/347 (83.86%), Postives = 292/347 (84.15%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK---------FS--------PTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPE-------------------------------LSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK         FS           GKKWCFRTKLDIRELGIQFGCVRLIPFVKK LSLYKDRFL SLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSD+GPE                               LSSYKRAKKMEKAGYEEWKSSVLSSNKKS KALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIKCVSHIFLYLFSLNCIKLIFTNLGKKWCFRTKLDIRELGIQFGCVRLIPFVKKGLSLYKDRFLASLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDDGPEAGSYNFQENLNHSRFNLSTKSYQKANLSLLQLSSYKRAKKMEKAGYEEWKSSVLSSNKKSTKALCKRTTQTSLDFLKEVSEAKELKAA 347          
BLAST of Gm0007420.1 vs. NCBI nr
Match: ref|XP_040940964.1| (origin of replication complex subunit 6 [Gossypium hirsutum] >gb|KAB2047931.1| hypothetical protein ES319_A13G079700v1 [Gossypium barbadense] >gb|TYG85790.1| hypothetical protein ES288_A13G083300v1 [Gossypium darwinii] >gb|TYH90980.1| hypothetical protein ES332_A13G086200v1 [Gossypium tomentosum] >gb|TYJ00368.1| hypothetical protein E1A91_A13G082400v1 [Gossypium mustelinum] >gb|KAG4165363.1| hypothetical protein ERO13_A13G074000v2 [Gossypium hirsutum])

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 281/299 (93.98%), Postives = 282/299 (94.31%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK            TKLDIRELGIQFGCVRLIPFVKK LSLYKDRFL SLPSSRQA+ADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKF DGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKS KALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIK------------TKLDIRELGIQFGCVRLIPFVKKGLSLYKDRFLASLPSSRQANADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFGDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSTKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. NCBI nr
Match: ref|XP_017622486.1| (PREDICTED: LOW QUALITY PROTEIN: origin of replication complex subunit 6 [Gossypium arboreum])

HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0
Identity = 279/299 (93.31%), Postives = 281/299 (93.98%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK            TKLDIRELGIQFGCVRL+PFVKK LSLYKDRFL SLPSSRQA+ADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGN ELLDVLPEKRKF DGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKS KALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIK------------TKLDIRELGIQFGCVRLMPFVKKGLSLYKDRFLASLPSSRQANADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNXELLDVLPEKRKFGDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSTKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. NCBI nr
Match: gb|KAG8473241.1| (hypothetical protein CXB51_035254 [Gossypium anomalum])

HSP 1 Score: 545.814 bits (1405), Expect = 0.000e+0
Identity = 281/312 (90.06%), Postives = 282/312 (90.38%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPE-------------LSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK            TKLDIRELGIQFGCVRLIPFVKK LSLYKDRFL SLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLD+L EKRKFDDGGYLSDEGPE             LSSYKRAKKMEKAGYEEWKSSVLSSNKKS KALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIK------------TKLDIRELGIQFGCVRLIPFVKKGLSLYKDRFLASLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDMLREKRKFDDGGYLSDEGPEVILHYLANLNLLQLSSYKRAKKMEKAGYEEWKSSVLSSNKKSTKALCKRTTQTSLDFLKEVSEAKELKAA 300          
BLAST of Gm0007420.1 vs. NCBI nr
Match: ref|XP_016703794.1| (origin of replication complex subunit 6 isoform X2 [Gossypium hirsutum])

HSP 1 Score: 541.576 bits (1394), Expect = 0.000e+0
Identity = 275/299 (91.97%), Postives = 275/299 (91.97%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAV CLEIAATRFGEVIFDRQKAVK                       FSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVTCLEIAATRFGEVIFDRQKAVK-----------------------FSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 276          
BLAST of Gm0007420.1 vs. NCBI nr
Match: ref|XP_007046155.2| (PREDICTED: origin of replication complex subunit 6 [Theobroma cacao])

HSP 1 Score: 528.865 bits (1361), Expect = 0.000e+0
Identity = 264/298 (88.59%), Postives = 273/298 (91.61%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKA 298
            MDLSDIARKLGLSE KLLVRKAAELRRLCDVQFDSSIIGVGEVCKA+ICLEIAATRFGEVIFDRQKA++LSGMSEKAYNRSFNSLQNGL IK            T LDIRELGIQFGCVRLIPFVKKSLSLYK+RF  SLP+SRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHD FGIS EKKDPKEVKGNRELLDVLPEKRKFDDGGYLSD+GPELSSYKR KKMEK  Y+EWKSSVLSSNKKS KA CKRTTQTSL+FLKEV EA+ELKA
Sbjct:    1 MDLSDIARKLGLSEQKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAIICLEIAATRFGEVIFDRQKAIRLSGMSEKAYNRSFNSLQNGLNIK------------TTLDIRELGIQFGCVRLIPFVKKSLSLYKERFTASLPASRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDAFGISKEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDDGPELSSYKRHKKMEKVAYDEWKSSVLSSNKKSTKAPCKRTTQTSLNFLKEVPEAQELKA 286          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A5D2S3I3_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D13G085400v1 PE=3 SV=1)

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 287/299 (95.99%), Postives = 287/299 (95.99%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK            TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK------------TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A5D2HUM7_GOSTO (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D13G087700v1 PE=3 SV=1)

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 287/299 (95.99%), Postives = 287/299 (95.99%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK            TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK------------TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A1U8KS28_GOSHI (origin of replication complex subunit 6-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107918722 PE=3 SV=1)

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 286/299 (95.65%), Postives = 286/299 (95.65%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAV CLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK            TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVTCLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK------------TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A5D1ZYR9_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D13G088100v1 PE=3 SV=1)

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 286/299 (95.65%), Postives = 286/299 (95.65%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSII VGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK            TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIISVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK------------TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A5J5NIR1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D13G082500v1 PE=3 SV=1)

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 286/299 (95.65%), Postives = 286/299 (95.65%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSII VGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK            TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIISVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK------------TKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A0D2SAJ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G084700 PE=3 SV=1)

HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0
Identity = 285/299 (95.32%), Postives = 285/299 (95.32%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK            TKLDIRELGIQFGCVRLIPFVKK LSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIK------------TKLDIRELGIQFGCVRLIPFVKKGLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A5B6X1W7_9ROSI (Origin of replication complex subunit 6 isoform X1 OS=Gossypium australe OX=47621 GN=EPI10_031982 PE=3 SV=1)

HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0
Identity = 291/347 (83.86%), Postives = 292/347 (84.15%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIK---------FS--------PTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPE-------------------------------LSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK         FS           GKKWCFRTKLDIRELGIQFGCVRLIPFVKK LSLYKDRFL SLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSD+GPE                               LSSYKRAKKMEKAGYEEWKSSVLSSNKKS KALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIKCVSHIFLYLFSLNCIKLIFTNLGKKWCFRTKLDIRELGIQFGCVRLIPFVKKGLSLYKDRFLASLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDDGPEAGSYNFQENLNHSRFNLSTKSYQKANLSLLQLSSYKRAKKMEKAGYEEWKSSVLSSNKKSTKALCKRTTQTSLDFLKEVSEAKELKAA 347          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A5D2WFB4_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A13G082400v1 PE=3 SV=1)

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 281/299 (93.98%), Postives = 282/299 (94.31%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK            TKLDIRELGIQFGCVRLIPFVKK LSLYKDRFL SLPSSRQA+ADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKF DGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKS KALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIK------------TKLDIRELGIQFGCVRLIPFVKKGLSLYKDRFLASLPSSRQANADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFGDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSTKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A5D2DXK4_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A13G083300v1 PE=3 SV=1)

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 281/299 (93.98%), Postives = 282/299 (94.31%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK            TKLDIRELGIQFGCVRLIPFVKK LSLYKDRFL SLPSSRQA+ADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKF DGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKS KALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIK------------TKLDIRELGIQFGCVRLIPFVKKGLSLYKDRFLASLPSSRQANADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFGDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSTKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Match: A0A5D2MHS6_GOSTO (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A13G086200v1 PE=3 SV=1)

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 281/299 (93.98%), Postives = 282/299 (94.31%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA 299
            MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGL IK            TKLDIRELGIQFGCVRLIPFVKK LSLYKDRFL SLPSSRQA+ADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKF DGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKS KALCKRTTQTSLDFLKEVSEAKELKAA
Sbjct:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLNIK------------TKLDIRELGIQFGCVRLIPFVKKGLSLYKDRFLASLPSSRQANADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFGDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSTKALCKRTTQTSLDFLKEVSEAKELKAA 287          
BLAST of Gm0007420.1 vs.
Match: sp|Q9ZVH3|ORC6_ARATH (Origin of replication complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=ORC6 PE=1 SV=2)

HSP 1 Score: 394.045 bits (1011), Expect = 7.467e-138
Identity = 204/297 (68.69%), Postives = 238/297 (80.13%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELK 297
            MD+SDI RKL L  +KLL+RKAAE+RRLCD QFDSSIIGVGE+CKAVICLEIAATR  ++IFDRQ AVKLSGMSEKAY+RSFNSLQN + IK             KL++REL +QFGCVR+I  V+  LS YK+RFL SLP+SR+A+ADFTRPVFTA AFYLCAKK KLK+DK+RLIEVCGTSESEFSCVSTSM DLC D  GIS EKKD K+VKGNR+LLDVLP KR+ +DGGY S  G E S YKR KKME+A YE+WKS+V++S KK+ +   KR  Q SL+F K+ SE KEL+
Sbjct:    1 MDISDIGRKLSLDNNKLLIRKAAEIRRLCDAQFDSSIIGVGEICKAVICLEIAATRL-QIIFDRQAAVKLSGMSEKAYSRSFNSLQNVIGIKI------------KLNVRELAVQFGCVRVIKSVQNVLSSYKERFLASLPASRRANADFTRPVFTAAAFYLCAKKQKLKVDKLRLIEVCGTSESEFSCVSTSMTDLCFDCVGISKEKKDAKDVKGNRDLLDVLPGKRRLEDGGYSS--GDESSCYKRHKKMEEAKYEDWKSTVVNSIKKNPEKGTKRVIQASLNFPKK-SETKELQ 281          
BLAST of Gm0007420.1 vs.
Match: sp|A2YNY4|ORC6_ORYSI (Origin of replication complex subunit 6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26966 PE=3 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 2.665e-125
Identity = 185/299 (61.87%), Postives = 227/299 (75.92%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKF-------DDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSE 292
            MD+S IA +LGLS  + +V KAAELRRLCDV FDSS++G+GEVCKA+ICLEIAA++F +VIFDR +AV++SGMSEKAY RSFN+LQNGL +K            T LD+RELGIQFGCVRLIPFV+K LSLYK+RFL +LP SR+AS DF RPVFTA +FYLCAK+HKLK+DK++LI++CGTS SEF+ VSTSM DLC DVFGI+ EKKD K +KG+RELLDVLP KRK         +      +  +L +YKR KKMEK  Y +WKSSVLSSNK++     K   Q  L+F K+ S+
Sbjct:    1 MDMSSIASRLGLSGSRPVVGKAAELRRLCDVTFDSSVLGIGEVCKAIICLEIAASKF-QVIFDRAEAVRMSGMSEKAYIRSFNALQNGLGVK------------TTLDVRELGIQFGCVRLIPFVQKGLSLYKERFLAALPPSRRASTDFGRPVFTAASFYLCAKRHKLKVDKLKLIDLCGTSSSEFTTVSTSMADLCFDVFGIAKEKKDAKSIKGSRELLDVLPSKRKHDDDSDSSGESSGDDQDELDLPTYKRHKKMEKEAYNDWKSSVLSSNKQTKPDPAKPRKQAQLNFKKKPSD 286          
BLAST of Gm0007420.1 vs.
Match: sp|Q8GSL4|ORC6_ORYSJ (Origin of replication complex subunit 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ORC6 PE=3 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 1.114e-124
Identity = 186/299 (62.21%), Postives = 227/299 (75.92%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKF-------DDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSE 292
            MD+S IA +LGLS  + +VRKAAELRRLCDV FDSS++G+GEVCKA+ICLEIAA++F +VIFDR +AV++SGMSEKAY RSFN+LQNGL +K            T LD+RELGIQFGCVRLIPFV+K LSLYK+RFL +LP SR+AS DF RPVFTA AFYLCAK+HKLK+DK++LI++CGTS SEF+ VSTSM DLC DVFGI+ EKKD K +KG+RELLDVLP KRK         +      +  +L +YKR KKMEK  Y +WKSSVL SNK++     K   Q  L+F K+ S+
Sbjct:    1 MDMSSIASRLGLSGSRPVVRKAAELRRLCDVTFDSSVLGIGEVCKAIICLEIAASKF-QVIFDRAEAVRMSGMSEKAYIRSFNALQNGLGVK------------TTLDVRELGIQFGCVRLIPFVQKGLSLYKERFLAALPPSRRASTDFGRPVFTAAAFYLCAKRHKLKVDKLKLIDLCGTSSSEFTTVSTSMADLCFDVFGIAKEKKDAKSIKGSRELLDVLPSKRKHDDDSDSSGESSGDDQDELDLPTYKRHKKMEKEAYNDWKSSVL-SNKQTKPDPAKPRKQAQLNFKKKPSD 285          
BLAST of Gm0007420.1 vs.
Match: sp|Q9Y5N6|ORC6_HUMAN (Origin recognition complex subunit 6 OS=Homo sapiens OX=9606 GN=ORC6 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.008e-18
Identity = 80/285 (28.07%), Postives = 126/285 (44.21%), Query Frame = 0
Query:    6 IARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSE-KKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKA---------------GYEEWKSSVLSSNKKSAKA 274
            +A +LGL+E  +L RKA E  RL  V+         E   AV+CL++AA+ + +   DR   +KLSG++++ Y     S +  L +             + + IR+L +QF C+  +    K L  Y+     SLP ++Q   D +RP+FT+ A     K  KLK+DK +++   G  ++ F         LC  +  I  +  ++P +V          P KRK      +  E P       AK+MEK                 YEEWK  +L +   + KA
Sbjct:    9 LAPRLGLAEPDML-RKAEEYLRLSRVKCVGLSARTTETSSAVMCLDLAAS-WMKCPLDRAYLIKLSGLNKETYQSCLKSFECLLGLN------------SNIGIRDLAVQFSCIEAVNMASKILKSYES----SLPQTQQVDLDLSRPLFTSAALLSACKILKLKVDKNKMVATSGVKKAIFD-------RLCKQLEKIGQQVDREPGDVATP-------PRKRK-----KIVVEAP-------AKEMEKVEEMPHKPQKDEDLTQDYEEWKRKILENAASAQKA 249          
BLAST of Gm0007420.1 vs.
Match: sp|Q2HJF3|ORC6_BOVIN (Origin recognition complex subunit 6 OS=Bos taurus OX=9913 GN=ORC6 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.777e-17
Identity = 73/279 (26.16%), Postives = 126/279 (45.16%), Query Frame = 0
Query:    6 IARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDV-----FGISSEKKDPKEV-----KGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKA 274
            +A +LG++E ++L RKA E  RL  V+         E   AV+CL++AA+   +   DR   +KLSG+++K Y     S        F    G      + + IR+L +QF C   +    K L  Y+     SLP ++Q   D +RP+FT  A     K  KLK+D+ ++    G  ++ F  +   ++ +   +       ++  +K  K V     K    +++ LP+ +K +D   L+ +                 YEEWK ++L +  ++ KA
Sbjct:    9 LAPRLGIAEQEVL-RKAEEYLRLSRVKCVGLSARTTETSNAVMCLDLAASCM-KCPLDRAYLIKLSGLNKKMYQSCLKS--------FECLLG----LNSNIGIRDLAVQFSCTEAVNLASKILQSYES----SLPQTQQVDLDLSRPLFTTAALLSACKILKLKVDRNKMAATSGVKKAIFDRLCKQLEKIGQQIDREAGDSVTPPQKKKKTVIEPSAKEIENVVETLPKPQKDED---LTQD-----------------YEEWKRNILENAARAQKA 249          
BLAST of Gm0007420.1 vs.
Match: sp|Q9WUJ8|ORC6_MOUSE (Origin recognition complex subunit 6 OS=Mus musculus OX=10090 GN=Orc6 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.606e-17
Identity = 73/274 (26.64%), Postives = 122/274 (44.53%), Query Frame = 0
Query:    6 IARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEK-----AGYEEWKSSVLSSNKKSAKA 274
            +A +LGL+E  +L RKA E  RL  V+  S      E   AVICL++AA+   +   DR   ++LSG+++  Y     S +  L +             + + IR+L +QF C   +    + L  YK      LP +++A  D +RP+FT  A     K  K+K+DK ++I   G  ++    +   ++ +   +   S++   P   +   E     P  +K + G  L     E+   +   K+ K       YEEWK  +L +  K+  A
Sbjct:    9 LAPRLGLAEPSVL-RKAEEFLRLSKVKCVSLSARSSETSNAVICLDLAAS-CRKCPLDRAYLIRLSGLNKMMYQSCLKSFECLLGLN------------SNVGIRDLAVQFSCTEAVNLAAEILQSYKS----GLPETQRADLDLSRPLFTTAALLSACKILKIKVDKTKMITTSGVKKAILDRLCKQLEKIGQQINRDSADLARPALKRKKPEF---SPTLKKKEPG--LEPPAKEIEVIETLHKLPKDEDLTQDYEEWKRKILENAAKAQTA 259          
BLAST of Gm0007420.1 vs. Araport11
Match: gnl|BL_ORD_ID|4885 (AT1G26840.1 | origin recognition complex protein 6 | Chr1:9298822-9300603 FORWARD LENGTH=284 | 201606)

HSP 1 Score: 394.045 bits (1011), Expect = 7.640e-139
Identity = 204/297 (68.69%), Postives = 238/297 (80.13%), Query Frame = 0
Query:    1 MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKKWCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADFTRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHDVFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAKKMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELK 297
            MD+SDI RKL L  +KLL+RKAAE+RRLCD QFDSSIIGVGE+CKAVICLEIAATR  ++IFDRQ AVKLSGMSEKAY+RSFNSLQN + IK             KL++REL +QFGCVR+I  V+  LS YK+RFL SLP+SR+A+ADFTRPVFTA AFYLCAKK KLK+DK+RLIEVCGTSESEFSCVSTSM DLC D  GIS EKKD K+VKGNR+LLDVLP KR+ +DGGY S  G E S YKR KKME+A YE+WKS+V++S KK+ +   KR  Q SL+F K+ SE KEL+
Sbjct:    1 MDISDIGRKLSLDNNKLLIRKAAEIRRLCDAQFDSSIIGVGEICKAVICLEIAATRL-QIIFDRQAAVKLSGMSEKAYSRSFNSLQNVIGIKI------------KLNVRELAVQFGCVRVIKSVQNVLSSYKERFLASLPASRRANADFTRPVFTAAAFYLCAKKQKLKVDKLRLIEVCGTSESEFSCVSTSMTDLCFDCVGISKEKKDAKDVKGNRDLLDVLPGKRRLEDGGYSS--GDESSCYKRHKKMEEAKYEDWKSTVVNSIKKNPEKGTKRVIQASLNFPKK-SETKELQ 281          
The following BLAST results are available for this feature:
BLAST of Gm0007420.1 vs. NCBI nr
Analysis Date: 2022-08-09 (BLASTP of HAU v1.0 Gossypium tomentosum (AD3) proteins vs NCBI nr )
Total hits: 10
Match NameE-valueIdentityDescription
gb|TYH33851.1|0.000e+095.99hypothetical protein ES332_D13G087700v1 [Gossypium... [more]
ref|XP_016703793.1|0.000e+095.65origin of replication complex subunit 6 isoform X1... [more]
gb|KAB1994188.1|0.000e+095.65hypothetical protein ES319_D13G082500v1 [Gossypium... [more]
ref|XP_012465456.1|0.000e+095.32PREDICTED: origin of replication complex subunit 6... [more]
gb|KAA3488211.1|0.000e+083.86origin of replication complex subunit 6 isoform X1... [more]
ref|XP_040940964.1|0.000e+093.98origin of replication complex subunit 6 [Gossypium... [more]
ref|XP_017622486.1|0.000e+093.31PREDICTED: LOW QUALITY PROTEIN: origin of replicat... [more]
gb|KAG8473241.1|0.000e+090.06hypothetical protein CXB51_035254 [Gossypium anoma... [more]
ref|XP_016703794.1|0.000e+091.97origin of replication complex subunit 6 isoform X2... [more]
ref|XP_007046155.2|0.000e+088.59PREDICTED: origin of replication complex subunit 6... [more]
back to top
BLAST of Gm0007420.1 vs. ExPASy TrEMBL
Analysis Date: 2022-08-09 (BLASTP of HAU v1.0 Gossypium tomentosum (AD3) proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A5D2S3I3_GOSMU0.000e+095.99Uncharacterized protein OS=Gossypium mustelinum OX... [more]
A0A5D2HUM7_GOSTO0.000e+095.99Uncharacterized protein OS=Gossypium tomentosum OX... [more]
A0A1U8KS28_GOSHI0.000e+095.65origin of replication complex subunit 6-like isofo... [more]
A0A5D1ZYR9_GOSDA0.000e+095.65Uncharacterized protein OS=Gossypium darwinii OX=3... [more]
A0A5J5NIR1_GOSBA0.000e+095.65Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A0D2SAJ5_GOSRA0.000e+095.32Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A5B6X1W7_9ROSI0.000e+083.86Origin of replication complex subunit 6 isoform X1... [more]
A0A5D2WFB4_GOSMU0.000e+093.98Uncharacterized protein OS=Gossypium mustelinum OX... [more]
A0A5D2DXK4_GOSDA0.000e+093.98Uncharacterized protein OS=Gossypium darwinii OX=3... [more]
A0A5D2MHS6_GOSTO0.000e+093.98Uncharacterized protein OS=Gossypium tomentosum OX... [more]
back to top
BLAST of Gm0007420.1 vs.
Analysis Date: 2022-08-09 (BLASTP of HAU v1.0 Gossypium tomentosum (AD3) proteins vs UniProt Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
sp|Q9ZVH3|ORC6_ARATH7.467e-13868.69Origin of replication complex subunit 6 OS=Arabido... [more]
sp|A2YNY4|ORC6_ORYSI2.665e-12561.87Origin of replication complex subunit 6 OS=Oryza s... [more]
sp|Q8GSL4|ORC6_ORYSJ1.114e-12462.21Origin of replication complex subunit 6 OS=Oryza s... [more]
sp|Q9Y5N6|ORC6_HUMAN1.008e-1828.07Origin recognition complex subunit 6 OS=Homo sapie... [more]
sp|Q2HJF3|ORC6_BOVIN1.777e-1726.16Origin recognition complex subunit 6 OS=Bos taurus... [more]
sp|Q9WUJ8|ORC6_MOUSE5.606e-1726.64Origin recognition complex subunit 6 OS=Mus muscul... [more]
back to top
BLAST of Gm0007420.1 vs. Araport11
Analysis Date: 2022-08-09 (BLASTP of HAU v1.0 Gossypium tomentosum (AD3) proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
gnl|BL_ORD_ID|48857.640e-13968.69AT1G26840.1 | origin recognition complex protein 6... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for HAU v1.0 Gossypium tomentosum (AD3) proteins
Date Performed: 2022-08-09
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008721Origin recognition complex, subunit 6PFAMPF05460ORC6coord: 3..93
e-value: 3.2E-17
score: 62.8
NoneNo IPR availableGENE3D1.10.472.10coord: 105..201
e-value: 1.7E-27
score: 97.5
NoneNo IPR availablePANTHERPTHR13394:SF1BNAC05G50940D PROTEINcoord: 1..291
NoneNo IPR availableCDDcd11583Orc6_midcoord: 106..201
e-value: 1.30541E-25
score: 95.8227
IPR020529Origin recognition complex, subunit 6, metazoa/plantPANTHERPTHR13394ORIGIN RECOGNITION COMPLEX SUBUNIT 6coord: 1..291

Sequences
The following sequences are available for this feature:

mRNA sequence

>Gm0007420.1_HAU-AD3_v1 ID=Gm0007420.1_HAU-AD3_v1; Name=Gm0007420.1; organism=Gossypium tomentosum; type=mRNA; length=900bp
ATGGACCTATCGGATATAGCGAGAAAGCTTGGTCTCTCAGAGCACAAGTT
GCTGGTCCGAAAAGCAGCGGAGCTCCGCCGCCTCTGCGATGTCCAGTTCG
ATTCTTCCATTATCGGTGTCGGAGAGGTTTGTAAAGCTGTAATATGCTTA
GAAATTGCTGCTACAAGGTTTGGGGAGGTTATATTTGATCGGCAGAAAGC
TGTCAAGTTAAGTGGAATGTCAGAAAAGGCTTACAATAGATCTTTCAATT
CCTTGCAGAATGGTCTAAAAATCAAATTTTCACCAACTTGGGGGAAAAAA
TGGTGCTTCAGAACAAAGCTGGATATTAGGGAATTGGGGATTCAATTTGG
ATGTGTTAGGCTCATACCTTTTGTGAAGAAGAGCTTATCCCTCTACAAGG
ATCGGTTTTTGGTATCATTGCCTTCTTCCAGGCAGGCCAGTGCAGACTTC
ACCAGGCCAGTGTTTACTGCTGTGGCATTTTACTTGTGCGCTAAAAAACA
CAAGCTTAAGATTGACAAGGTTAGGTTGATTGAGGTTTGTGGCACCTCTG
AATCTGAGTTTTCTTGTGTCTCCACCTCCATGAAAGATCTGTGTCATGAT
GTTTTTGGGATCTCAAGTGAGAAAAAAGATCCCAAGGAAGTGAAAGGAAA
CCGAGAACTGCTAGACGTGTTACCTGAAAAAAGAAAATTTGATGATGGTG
GTTATTTATCTGATGAAGGACCAGAGCTTTCAAGTTACAAGCGAGCAAAG
AAAATGGAGAAAGCTGGTTATGAAGAGTGGAAATCATCTGTTCTATCATC
TAACAAAAAAAGCGCAAAAGCTCTTTGCAAGCGCACCACTCAAACCAGTC
TTGACTTTCTCAAGGAAGTGTCAGAGGCAAAGGAGTTAAAAGCTGCATAG
back to top

protein sequence of Gm0007420.1_HAU-AD3_v1

>Gm0007420.1_HAU-AD3_v1 ID=Gm0007420.1_HAU-AD3_v1; Name=Gm0007420.1_HAU-AD3_v1; organism=Gossypium tomentosum; type=polypeptide; length=300bp
MDLSDIARKLGLSEHKLLVRKAAELRRLCDVQFDSSIIGVGEVCKAVICL
EIAATRFGEVIFDRQKAVKLSGMSEKAYNRSFNSLQNGLKIKFSPTWGKK
WCFRTKLDIRELGIQFGCVRLIPFVKKSLSLYKDRFLVSLPSSRQASADF
TRPVFTAVAFYLCAKKHKLKIDKVRLIEVCGTSESEFSCVSTSMKDLCHD
VFGISSEKKDPKEVKGNRELLDVLPEKRKFDDGGYLSDEGPELSSYKRAK
KMEKAGYEEWKSSVLSSNKKSAKALCKRTTQTSLDFLKEVSEAKELKAA*
back to top

mRNA from alignment at D13:12373445..12376205+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gm0007420.1_HAU-AD3_v1 ID=Gm0007420.1_HAU-AD3_v1; Name=Gm0007420.1; organism=Gossypium tomentosum; type=mRNA; length=2761bp; location=Sequence derived from: D13:12373445..12376205+ (Gossypium tomentosum
ATCTTTTTCATCGTGCATTTCTCATTTTATTTTTCCATTAAAAAATATAT GATTAGCAGCACTTGGTTCTCCATTTTTCCACAGTATTAGAAATCAAGTA AAGGAAATCCAATAATCCGTTAAGCAACCCAGTTTTGGTGCCAATATGGA CCTATCGGATATAGCGAGAAAGCTTGGTCTCTCAGAGCACAAGTTGCTGG TCCGAAAAGCAGCGGAGCTCCGCCGCCTCTGCGATGTCCAGTTCGATTCT TCCATTATCGGTGTCGTAAGTGCTTCATCATATAATCATTTATTACTTTA AACCCAATATAGTTCAAATGTGAATCGTTGATCTATTATTCCCCCCTTTT TCTGTTTCTGTTTGTAGGGAGAGGTTTGTAAAGCTGTAATATGCTTAGAA ATTGCTGCTACAAGGTATGATGTGTTATCTATTTCTTTGAATGTATCTTA AAATTTTGGATTTGGGTTCCTTTTTAAAATTGGAATTGTTATGAAATTTG TAGGTTTGGGGAGGTTATATTTGATCGGCAGAAAGCTGTCAAGTTAAGTG GAATGTCAGAAAAGGCTTACAATAGATCTTTCAATTCCTTGCAGAATGGT CTAAAAATCAAGTGGGTTTCTCATATTTTTCTTTATTTATTTTCTTTGAA TTGTATGGGCTATTATTTTTTACTCAGATTTTCACCAACTTGGGGGAAAA AATGGTGCTTCAGAACAAAGCTGGATATTAGGGAATTGGGGATTCAATTT GGATGTGTTAGGCTCATACCTTTTGTGAAGAAGAGCTTATCCCTGTAAGA TCCTTTTCCATTTCATATATTATATTTGTTTATCTGATTACATTTCCATA TCTTTTACGTGTTTGGAAAAATGCCTGAATGGGTAAGTCCCAATAGATGA TCTTTAATTGCTAGGATTGTTACAATCGACGACTCTTCATTTGATCTTTA GATGATATGTTATCTTATGCTTTTCCTGTACCATCCTTTGAACTGCTTGA GTGACTTAATTTATGTTTATGTCAGCTACAAGGATCGGTTTTTGGTATCA TTGCCTTCTTCCAGGCAGGCCAGTGCAGACTTCACCAGGCCAGTGTTTAC TGCTGTGGCATTTTACTTGTGCGCTAAAAAACACAAGGTAATGTGCGCTT AATTCATCCTATTAAATGTTTTTATTCCTCTATTTGCCTGTTTTTGACAT AAATTATCTACTTCACAGCTTAAGATTGACAAGGTTAGGTTGATTGAGGT TTGTGGCACCTCTGAATCTGAGTTTTCTTGTGTAAGTAACATGTTCTTTT ATTTTACTTCCCTACATGTAATCCTTTTATTGTTAACTTATAAATGTTTA ATGCACTGAACATTTGCTTGGAACTTTCAATGCAGGTCTCCACCTCCATG AAAGATCTGTGTCATGATGTTTTTGGGATCTCAAGTGAGAAAAAAGATCC CAAGGAAGTGAAAGGAAACCGAGGTAGGTGTTCATATTGACTTACCCTAG AATTGGCTGTATATAACCATGTGTATGTAGGCATTTGATGGTATCATTTG CAGTACAATTTTAGTACCATATATTGGCTTTCAATACTAGGGAATTTATT TTCTCTAAACTTTGTTTTGATGTGTCTGCAGAACTGCTAGACGTGTTACC TGAAAAAAGAAAATTTGATGATGGTGGTTATTTATCTGATGAAGGACCAG AGGTAATACTGCATTATCTGTAATATTAGTTTACTAAATGTTGGATGAAG TAGGATTCATTGTTTTCTATATATGAATCCTTGTGTTTTGGCTTTTGTAA CAGTTTCTGCAACATAATCTGTCTACTTAATTGGTTGACTGAACAAGTGC TTGGAATAATTGTATGAAATTATTTTTTCATGATCTGAATCAATGATGAG GCTTCTATTATATCATTCAAGAGATTAAAATCTCTAATGTCTAAGCTCTG CATGGGTTTTTCATTGGTCTTTCAGCAGCCTTTCTTGGTGATTCTAAGTC TTTGATGCTTAGTAAGGCTGGCAGTTATATTTTCTAAGAGAATTTGAACC ATTTGAGATTTAATCTCAGCACTAAAAGCTACCAGAAGTTTGTGATATTG TTCTTGAAAACAACATTTGTTTATTTTCTTGTGCATCAAAATACTGTAGG GCTAACCTGAACCTCTTGCAGCTTTCAAGTTACAAGCGAGCAAAGAAAAT GGAGAAAGCTGGTTATGAAGAGTGGAAATCATCTGTTCTATCATCTAACA AAAAAAGCGCAAAAGGTAATGAAAGAATTTCCTTTACACTGCAAATGAAC TCAAAAGAAAACCAGCATAACTGATCTTTTATACATATCTCTGGGTATTT TCCTTCAGCTCTTTGCAAGCGCACCACTCAAACCAGTCTTGACTTTCTCA AGGAAGTGTCAGAGGCAAAGGAGTTAAAAGCTGCATAGAAGAATAGAATA CATGTAGTTATAAGTTTGAAAAGGAAAAGAAAAATCTAGAAAAGGACTAA AGATATTAGCCATGCAAGTTTTGTACATGGCATTGAAATGTTTATATCTT GAAGTGTCTAATGACTAGCCTTATTATCGTTAGTAATAGTTCTAAAATTG TGTTGTGTGGTAGCTATGACCAACAATTTCTTATCTTTATCGCACCAAAT CTATTGCATATGGTATGCTCATAATGACATATATTGTCTAACATCGGGTA TCTGGTTATTAAGTCATTTCGATGATGATGCCGGAGCCGGAGTGTTGGTG ATGTTCTCCAG
back to top

Coding sequence (CDS) from alignment at D13:12373445..12376205+

>Gm0007420.1_HAU-AD3_v1 ID=Gm0007420.1_HAU-AD3_v1; Name=Gm0007420.1; organism=Gossypium tomentosum; type=CDS; length=900bp; location=Sequence derived from: D13:12373445..12376205+ (Gossypium tomentosum
ATGGACCTATCGGATATAGCGAGAAAGCTTGGTCTCTCAGAGCACAAGTT
GCTGGTCCGAAAAGCAGCGGAGCTCCGCCGCCTCTGCGATGTCCAGTTCG
ATTCTTCCATTATCGGTGTCGGAGAGGTTTGTAAAGCTGTAATATGCTTA
GAAATTGCTGCTACAAGGTTTGGGGAGGTTATATTTGATCGGCAGAAAGC
TGTCAAGTTAAGTGGAATGTCAGAAAAGGCTTACAATAGATCTTTCAATT
CCTTGCAGAATGGTCTAAAAATCAAATTTTCACCAACTTGGGGGAAAAAA
TGGTGCTTCAGAACAAAGCTGGATATTAGGGAATTGGGGATTCAATTTGG
ATGTGTTAGGCTCATACCTTTTGTGAAGAAGAGCTTATCCCTCTACAAGG
ATCGGTTTTTGGTATCATTGCCTTCTTCCAGGCAGGCCAGTGCAGACTTC
ACCAGGCCAGTGTTTACTGCTGTGGCATTTTACTTGTGCGCTAAAAAACA
CAAGCTTAAGATTGACAAGGTTAGGTTGATTGAGGTTTGTGGCACCTCTG
AATCTGAGTTTTCTTGTGTCTCCACCTCCATGAAAGATCTGTGTCATGAT
GTTTTTGGGATCTCAAGTGAGAAAAAAGATCCCAAGGAAGTGAAAGGAAA
CCGAGAACTGCTAGACGTGTTACCTGAAAAAAGAAAATTTGATGATGGTG
GTTATTTATCTGATGAAGGACCAGAGCTTTCAAGTTACAAGCGAGCAAAG
AAAATGGAGAAAGCTGGTTATGAAGAGTGGAAATCATCTGTTCTATCATC
TAACAAAAAAAGCGCAAAAGCTCTTTGCAAGCGCACCACTCAAACCAGTC
TTGACTTTCTCAAGGAAGTGTCAGAGGCAAAGGAGTTAAAAGCTGCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008721ORC6_cyclin_first
IPR020529ORC6_met/pln
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005664nuclear origin of replication recognition complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication