Gm0110170.1
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Gm0110170.1 vs. NCBI nr
Match: gb|TYH96584.1| (hypothetical protein ES332_A12G186900v1 [Gossypium tomentosum]) HSP 1 Score: 471.085 bits (1211), Expect = 1.244e-167 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. NCBI nr
Match: ref|XP_016706042.1| (cell division topological specificity factor homolog, chloroplastic [Gossypium hirsutum] >gb|KAB2053207.1| hypothetical protein ES319_A12G171400v1 [Gossypium barbadense] >gb|KAG4170682.1| hypothetical protein ERO13_A12G162200v2 [Gossypium hirsutum] >gb|TYG90512.1| hypothetical protein ES288_A12G188000v1 [Gossypium darwinii]) HSP 1 Score: 468.003 bits (1203), Expect = 2.110e-166 Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. NCBI nr
Match: ref|XP_017634862.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like [Gossypium arboreum] >gb|KHG11440.1| Cell division topological specificity factor, chloroplastic -like protein [Gossypium arboreum]) HSP 1 Score: 466.848 bits (1200), Expect = 5.421e-166 Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. NCBI nr
Match: gb|TYJ05621.1| (hypothetical protein E1A91_A12G175600v1 [Gossypium mustelinum]) HSP 1 Score: 464.537 bits (1194), Expect = 5.084e-165 Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNI+HALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRVRAEYQEADESGTITNIDYKD GERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNILHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDMGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. NCBI nr
Match: ref|XP_012438525.1| (PREDICTED: cell division topological specificity factor homolog, chloroplastic-like [Gossypium raimondii] >ref|XP_016736179.1| cell division topological specificity factor homolog, chloroplastic [Gossypium hirsutum] >gb|KAB1999769.1| hypothetical protein ES319_D12G183800v1 [Gossypium barbadense] >gb|MBA0563359.1| hypothetical protein [Gossypium lobatum] >gb|MBA0772918.1| hypothetical protein [Gossypium trilobum] >gb|TYG41670.1| hypothetical protein ES288_D12G194000v1 [Gossypium darwinii] >gb|TYH39704.1| hypothetical protein ES332_D12G194900v1 [Gossypium tomentosum] >gb|TYI51586.1| hypothetical protein E1A91_D12G186500v1 [Gossypium mustelinum]) HSP 1 Score: 456.833 bits (1174), Expect = 6.156e-162 Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQHPFRTYIRSSKVE VGFMNGGSRFSEITPKWNG+TINSRS GSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADE+GTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASYHQHPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGMTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. NCBI nr
Match: gb|MBA0592883.1| (hypothetical protein [Gossypium raimondii]) HSP 1 Score: 457.218 bits (1175), Expect = 1.819e-161 Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQHPFRTYIRSSKVE VGFMNGGSRFSEITPKWNG+TINSRS GSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADE+GTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 39 MAIYGNLRVDATLASYHQHPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGMTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFYVPDE 265
BLAST of Gm0110170.1 vs. NCBI nr
Match: gb|MBA0621108.1| (hypothetical protein [Gossypium davidsonii]) HSP 1 Score: 455.677 bits (1171), Expect = 7.032e-161 Identity = 220/227 (96.92%), Postives = 223/227 (98.24%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQHPFRTYIRSSKVE VGFMNGGSRFSEITPKWNG TINSRS GSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADE+GTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 40 MAIYGNLRVDATLASYHQHPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGKTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFYVPDE 266
BLAST of Gm0110170.1 vs. NCBI nr
Match: gb|MBA0718199.1| (hypothetical protein [Gossypium laxum]) HSP 1 Score: 454.136 bits (1167), Expect = 7.936e-161 Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQ PFRTYIRSSKVE VGFMNGGSRFSEITPKWNG+TINSRS GSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADE+GTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASYHQRPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGMTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. NCBI nr
Match: gb|MBA0862128.1| (hypothetical protein [Gossypium schwendimanii]) HSP 1 Score: 453.366 bits (1165), Expect = 1.217e-160 Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQHPFRTYIRSSKVE VGFMNGGSRFSEITPKWNG+TINSRS GSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPAS RSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADE+GTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASYHQHPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGMTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASIRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. NCBI nr
Match: gb|KAG8475631.1| (hypothetical protein CXB51_032618 [Gossypium anomalum]) HSP 1 Score: 447.973 bits (1151), Expect = 5.286e-158 Identity = 222/252 (88.10%), Postives = 226/252 (89.68%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKV-------------------------ECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQHPFRTYIRSSKV ECVGFMNGGSRFSEITPKWNG+TINSR+IGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASYHQHPFRTYIRSSKVNVVRDVKRRCVPIAYSFRLNLVVPVECVGFMNGGSRFSEITPKWNGMTINSRNIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 252
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A5D2MZQ2_GOSTO (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A12G186900v1 PE=3 SV=1) HSP 1 Score: 471.085 bits (1211), Expect = 5.983e-168 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A5D2EB71_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A12G188000v1 PE=3 SV=1) HSP 1 Score: 468.003 bits (1203), Expect = 1.015e-166 Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A5J5TBB8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G171400v1 PE=3 SV=1) HSP 1 Score: 468.003 bits (1203), Expect = 1.015e-166 Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A1U8KU89_GOSHI (cell division topological specificity factor homolog, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107920721 PE=3 SV=1) HSP 1 Score: 468.003 bits (1203), Expect = 1.015e-166 Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A0B0NF22_GOSAR (Cell division topological specificity factor, chloroplastic-like protein OS=Gossypium arboreum OX=29729 GN=LOC108476978 PE=3 SV=1) HSP 1 Score: 466.848 bits (1200), Expect = 2.608e-166 Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A5D2WX36_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A12G175600v1 PE=3 SV=1) HSP 1 Score: 464.537 bits (1194), Expect = 2.446e-165 Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNI+HALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRVRAEYQEADESGTITNIDYKD GERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNILHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDMGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A5D2ABK9_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D12G194000v1 PE=3 SV=1) HSP 1 Score: 456.833 bits (1174), Expect = 2.962e-162 Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQHPFRTYIRSSKVE VGFMNGGSRFSEITPKWNG+TINSRS GSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADE+GTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASYHQHPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGMTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A7J8MF72_9ROSI (Uncharacterized protein OS=Gossypium lobatum OX=34289 GN=Golob_008340 PE=3 SV=1) HSP 1 Score: 456.833 bits (1174), Expect = 2.962e-162 Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQHPFRTYIRSSKVE VGFMNGGSRFSEITPKWNG+TINSRS GSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADE+GTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASYHQHPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGMTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A7J9EJB1_9ROSI (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_008229 PE=3 SV=1) HSP 1 Score: 456.833 bits (1174), Expect = 2.962e-162 Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQHPFRTYIRSSKVE VGFMNGGSRFSEITPKWNG+TINSRS GSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADE+GTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASYHQHPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGMTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Match: A0A0D2T2C7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G178200 PE=3 SV=1) HSP 1 Score: 456.833 bits (1174), Expect = 2.962e-162 Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0
Query: 1 MAIYGNLRVDATLASHHQHPFRTYIRSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
MAIYGNLRVDATLAS+HQHPFRTYIRSSKVE VGFMNGGSRFSEITPKWNG+TINSRS GSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDS LGTIYSVTVPVRRV+AEYQEADE+GTITNIDYKDTGERSGSVDVRFDFYVPDE
Sbjct: 1 MAIYGNLRVDATLASYHQHPFRTYIRSSKVEFVGFMNGGSRFSEITPKWNGMTINSRSFGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSDLGTIYSVTVPVRRVKAEYQEADETGTITNIDYKDTGERSGSVDVRFDFYVPDE 227
BLAST of Gm0110170.1 vs.
Match: sp|Q9C4Z7|MINE1_ARATH (Cell division topological specificity factor homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MINE1 PE=1 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.448e-91 Identity = 142/226 (62.83%), Postives = 170/226 (75.22%), Query Frame = 0
Query: 5 GNLRVDATLAS--HHQHPFRTYI--RSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPD 226
G LR+ ATL S HH H R + SSKV+ GF++ G E G+ I+ + + K GDY+ SP+ +E+ESFL +AINM FF+RL+LAWKI+FPS ASRRSSNA IAKQRLKMILFSDRC VSDEAK+KIV NI+HALSDFVEIES++KVQL+VSTD LGTIYSVTVPVRRV+ EYQ+ DE+GTITN++YKDT R GSVDVRFDFYVP+
Sbjct: 6 GTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAISRENTRGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNARIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRRVKPEYQDVDEAGTITNVEYKDT--RDGSVDVRFDFYVPE 229
BLAST of Gm0110170.1 vs. Araport11
Match: gnl|BL_ORD_ID|10525 (AT1G69390.1 | homologue of bacterial MinE 1 | Chr1:26084721-26086284 FORWARD LENGTH=229 | 201606) HSP 1 Score: 271.552 bits (693), Expect = 1.482e-92 Identity = 142/226 (62.83%), Postives = 170/226 (75.22%), Query Frame = 0
Query: 5 GNLRVDATLAS--HHQHPFRTYI--RSSKVECVGFMNGGSRFSEITPKWNGVTINSRSIGSKNKRSVGIMGDYKFSPNAVHEEVESFLLHAINMSFFERLHLAWKIVFPSPASRRSSNANIAKQRLKMILFSDRCAVSDEAKQKIVKNIVHALSDFVEIESKDKVQLSVSTDSHLGTIYSVTVPVRRVRAEYQEADESGTITNIDYKDTGERSGSVDVRFDFYVPD 226
G LR+ ATL S HH H R + SSKV+ GF++ G E G+ I+ + + K GDY+ SP+ +E+ESFL +AINM FF+RL+LAWKI+FPS ASRRSSNA IAKQRLKMILFSDRC VSDEAK+KIV NI+HALSDFVEIES++KVQL+VSTD LGTIYSVTVPVRRV+ EYQ+ DE+GTITN++YKDT R GSVDVRFDFYVP+
Sbjct: 6 GTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAISRENTRGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNARIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRRVKPEYQDVDEAGTITNVEYKDT--RDGSVDVRFDFYVPE 229 The following BLAST results are available for this feature:
BLAST of Gm0110170.1 vs. NCBI nr
Analysis Date: 2022-08-09 (BLASTP of HAU v1.0 Gossypium tomentosum (AD3) proteins vs NCBI nr ) Total hits: 10
BLAST of Gm0110170.1 vs. ExPASy TrEMBL
Analysis Date: 2022-08-09 (BLASTP of HAU v1.0 Gossypium tomentosum (AD3) proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Gm0110170.1 vs.
Analysis Date: 2022-08-09 (BLASTP of HAU v1.0 Gossypium tomentosum (AD3) proteins vs UniProt Swissprot) Total hits: 1
BLAST of Gm0110170.1 vs. Araport11
Analysis Date: 2022-08-09 (BLASTP of HAU v1.0 Gossypium tomentosum (AD3) proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for HAU v1.0 Gossypium tomentosum (AD3) proteins
Date Performed: 2022-08-09
Sequences
The
following sequences are available for this feature:
mRNA sequence >Gm0110170.1_HAU-AD3_v1 ID=Gm0110170.1_HAU-AD3_v1; Name=Gm0110170.1; organism=Gossypium tomentosum; type=mRNA; length=684bpback to top protein sequence of Gm0110170.1_HAU-AD3_v1 >Gm0110170.1_HAU-AD3_v1 ID=Gm0110170.1_HAU-AD3_v1; Name=Gm0110170.1_HAU-AD3_v1; organism=Gossypium tomentosum; type=polypeptide; length=228bpback to top mRNA from alignment at A12:88818711..88821088- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Gm0110170.1_HAU-AD3_v1 ID=Gm0110170.1_HAU-AD3_v1; Name=Gm0110170.1; organism=Gossypium tomentosum; type=mRNA; length=2378bp; location=Sequence derived from: A12:88818711..88821088- (Gossypium tomentosumback to top Coding sequence (CDS) from alignment at A12:88818711..88821088- >Gm0110170.1_HAU-AD3_v1 ID=Gm0110170.1_HAU-AD3_v1; Name=Gm0110170.1; organism=Gossypium tomentosum; type=CDS; length=684bp; location=Sequence derived from: A12:88818711..88821088- (Gossypium tomentosumback to top |