Gothu.00031342-RA, Gothu.00031342-RA_ISU-D1_v1 (mRNA) Gossypium thurberi
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A2P5QAB8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD31593 PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 3.971e-108 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A0D2TUW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G009700 PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 5.920e-108 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A1U8MHM1_GOSHI (cullin-1-like OS=Gossypium hirsutum OX=3635 GN=LOC107936846 PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 6.591e-108 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A1U8LUY0_GOSHI (cullin-1 OS=Gossypium hirsutum OX=3635 GN=LOC107929991 PE=3 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 2.521e-107 Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDA IAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAAIAL 155
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A2P5YDT6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA06799 PE=3 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 9.846e-104 Identity = 155/171 (90.64%), Postives = 155/171 (90.64%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDL----------------VYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDL VYQEVHEKVRDAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVCHKFFKHTFIQYWSAVYQEVHEKVRDAVIAL 171
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A1U8L4A7_GOSHI (cullin-1-like OS=Gossypium hirsutum OX=3635 GN=LOC107923833 PE=3 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 2.301e-103 Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGI KL+RILEGLPEPPF+SEEYMMLYTTIYNMCTQKPP+DYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRW NHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVH KV+DAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGIKKLRRILEGLPEPPFTSEEYMMLYTTIYNMCTQKPPYDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWGNHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHAKVKDAVIAL 155
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A061DRD9_THECC (Cullin 1 OS=Theobroma cacao OX=3641 GN=TCM_004565 PE=3 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 1.527e-102 Identity = 147/155 (94.84%), Postives = 151/155 (97.42%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTI+LDQGWDYM KGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLRE+HDEFMLRELVKRWANHK+MVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVY +VH KVRDAVI L
Sbjct: 1 MERKTIDLDQGWDYMQKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLRERHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYNDVHVKVRDAVITL 155
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A0D2SCG5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G130200 PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 2.224e-102 Identity = 147/155 (94.84%), Postives = 151/155 (97.42%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGI KL+RILEGLPEPPF+SEEYMMLYTTIYNMCTQKPP+DYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRW NHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEV KV+DAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGIKKLRRILEGLPEPPFTSEEYMMLYTTIYNMCTQKPPYDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWGNHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVCAKVKDAVIAL 155
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A0D2QRT9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G130200 PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 7.094e-102 Identity = 147/155 (94.84%), Postives = 151/155 (97.42%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGI KL+RILEGLPEPPF+SEEYMMLYTTIYNMCTQKPP+DYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRW NHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEV KV+DAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGIKKLRRILEGLPEPPFTSEEYMMLYTTIYNMCTQKPPYDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWGNHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVCAKVKDAVIAL 155
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Match: A0A2P5X566_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA22188 PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.252e-101 Identity = 147/155 (94.84%), Postives = 151/155 (97.42%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGI KL+RILEGLPEPPF+SEEYMMLYTTIYNMCTQKPP+DYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRW NHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCF DLVYQEVH KV+DAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGIKKLRRILEGLPEPPFTSEEYMMLYTTIYNMCTQKPPYDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWGNHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFCDLVYQEVHAKVKDAVIAL 155
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana OX=3702 GN=CUL1 PE=1 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 4.358e-96 Identity = 136/155 (87.74%), Postives = 144/155 (92.90%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTI+L+QGWDYM GITKLKRILEGL EP F SE+YMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYI STVLP+LREKHDEFMLREL KRW+NHKVMVRWLSRFF+YLDRYFIARRSLP LNEVGLTCFRDLVY E+H KV+ AVIAL
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIAL 155
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CLL1_ARATH (Putative cullin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g43140 PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.749e-64 Identity = 92/155 (59.35%), Postives = 120/155 (77.42%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
M ++ I L++GW M G+ KL+RILE L EPPF +Y+ LYT IY+MC Q+PP+DYSQ+LY+KYR + Y TVLPS+RE+H E+MLRELVKRWANHK++VRWLSRF YLDR+++ARR LP LN+VG T F DLVYQE+ + +D ++AL
Sbjct: 10 MMKELILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYSQELYNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDRFYVARRGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLAL 164
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CUL2_ARATH (Cullin-2 OS=Arabidopsis thaliana OX=3702 GN=CUL2 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.603e-59 Identity = 90/156 (57.69%), Postives = 116/156 (74.36%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLP-EPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
M +K L+ GW M G+ KL++ILE +P EPPF + M LYTT++N+CTQKPP+DYSQQ+YD+Y + +Y TVLP++REKH E+MLRELVKRWAN K++VRWLS FF YLDR++ R S P L+ VG FRDLVYQE+ K +DAV+AL
Sbjct: 1 MAKKDSVLEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYSQQIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFYTRRGSHPTLSAVGFISFRDLVYQELQSKAKDAVLAL 156
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CLL2_ARATH (Putative cullin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g59790 PE=3 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 6.454e-59 Identity = 92/154 (59.74%), Postives = 114/154 (74.03%), Query Frame = 0
Query: 4 KTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS--LPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
+ I+ ++GW + KGITKL RILEG PEP F E LYT IY+MC Q+ DYSQQLY+KYR+ E+Y TVLPSLREKHDE MLRELVKRW NHK+MV+WLS+FF Y+DR+ + R +P+L+EVGLTCF DLVY E+ ++ VIAL
Sbjct: 10 RQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRS--DYSQQLYEKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVRRSKIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIAL 161
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CLL3_ARATH (Cullin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g59800 PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 2.154e-48 Identity = 78/150 (52.00%), Postives = 100/150 (66.67%), Query Frame = 0
Query: 6 IELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
I+ + W + +G TKL R++EG EP F+ E MM++T Y +C K P QQLYDKYRE E Y TVLPSLREKHDE MLREL KRW HK++VR SR YLD F++++ LP+L EVGL CFRD VY+E+ +A++AL
Sbjct: 7 IKFEVEWSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRICAYKNP----QQLYDKYRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKKGLPSLREVGLNCFRDQVYREMQSMAAEAILAL 152
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CUL1_MOUSE (Cullin-1 OS=Mus musculus OX=10090 GN=Cul1 PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 5.552e-8 Identity = 42/181 (23.20%), Postives = 83/181 (45.86%), Query Frame = 0
Query: 4 KTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQ-----------KPPHDYSQ------------QLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFI------ARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
K I LDQ WD + GI ++ + YM LYT +YN CT PP + +LY + +E + Y+T+ +L + DE +L+ ++W +++ + L+ YL+R+++ R+ + + + L +RD +++ ++++V +AV+ L
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTN-LLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKL 186
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii OX=9601 GN=CUL1 PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 5.994e-8 Identity = 42/181 (23.20%), Postives = 83/181 (45.86%), Query Frame = 0
Query: 4 KTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQ-----------KPPHDYSQ------------QLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFI------ARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
K I LDQ WD + GI ++ + YM LYT +YN CT PP + +LY + +E + Y+T+ +L + DE +L+ ++W +++ + L+ YL+R+++ R+ + + + L +RD +++ ++++V +AV+ L
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTN-LLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKL 186
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CUL1_HUMAN (Cullin-1 OS=Homo sapiens OX=9606 GN=CUL1 PE=1 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 5.994e-8 Identity = 42/181 (23.20%), Postives = 83/181 (45.86%), Query Frame = 0
Query: 4 KTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQ-----------KPPHDYSQ------------QLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFI------ARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
K I LDQ WD + GI ++ + YM LYT +YN CT PP + +LY + +E + Y+T+ +L + DE +L+ ++W +++ + L+ YL+R+++ R+ + + + L +RD +++ ++++V +AV+ L
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTN-LLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKL 186
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum OX=44689 GN=culC PE=3 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 3.452e-7 Identity = 33/119 (27.73%), Postives = 60/119 (50.42%), Query Frame = 0
Query: 22 LKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLV 140
LK + + + S+ + LY YNM QK + LY+ ++ ++++ + V ++ E DE L EL W NHK + + Y+DR ++ + +L ++ ++GL FRD V
Sbjct: 33 LKTAMRQIHQQNASNLSFEELYRNGYNMVLQK----HGDLLYNNLKKMVDKHLKA-VAKTVSESIDEKFLLELNSSWINHKTSMLMIRDILMYMDRNYVKQNNLSSVFDLGLYLFRDNV 146
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus OX=10090 GN=Cul4a PE=1 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 4.336e-7 Identity = 31/118 (26.27%), Postives = 62/118 (52.54%), Query Frame = 0
Query: 42 LYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNEVGLTCFRDLVYQE--VHEKVRDAVIAL 155
LY + N+C+ H S LY + R+ E+++ + +LP + D + L+++ W +H + + F +LDR ++ + S LP++ ++GL FR+ + + V K D ++ L
Sbjct: 86 LYQAVENLCS----HKVSPTLYKQLRQVCEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGILLL 199
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|30261 (AT4G02570.4 | cullin 1 | Chr4:1129315-1133435 FORWARD LENGTH=738 | 201606) HSP 1 Score: 295.819 bits (756), Expect = 4.527e-97 Identity = 136/155 (87.74%), Postives = 144/155 (92.90%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTI+L+QGWDYM GITKLKRILEGL EP F SE+YMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYI STVLP+LREKHDEFMLREL KRW+NHKVMVRWLSRFF+YLDRYFIARRSLP LNEVGLTCFRDLVY E+H KV+ AVIAL
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIAL 155
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|30260 (AT4G02570.3 | cullin 1 | Chr4:1129315-1133435 FORWARD LENGTH=738 | 201606) HSP 1 Score: 295.819 bits (756), Expect = 4.527e-97 Identity = 136/155 (87.74%), Postives = 144/155 (92.90%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTI+L+QGWDYM GITKLKRILEGL EP F SE+YMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYI STVLP+LREKHDEFMLREL KRW+NHKVMVRWLSRFF+YLDRYFIARRSLP LNEVGLTCFRDLVY E+H KV+ AVIAL
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIAL 155
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|30259 (AT4G02570.2 | cullin 1 | Chr4:1129315-1133435 FORWARD LENGTH=738 | 201606) HSP 1 Score: 295.819 bits (756), Expect = 4.527e-97 Identity = 136/155 (87.74%), Postives = 144/155 (92.90%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTI+L+QGWDYM GITKLKRILEGL EP F SE+YMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYI STVLP+LREKHDEFMLREL KRW+NHKVMVRWLSRFF+YLDRYFIARRSLP LNEVGLTCFRDLVY E+H KV+ AVIAL
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIAL 155
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|30258 (AT4G02570.1 | cullin 1 | Chr4:1129315-1133435 FORWARD LENGTH=738 | 201606) HSP 1 Score: 295.819 bits (756), Expect = 4.527e-97 Identity = 136/155 (87.74%), Postives = 144/155 (92.90%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTI+L+QGWDYM GITKLKRILEGL EP F SE+YMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYI STVLP+LREKHDEFMLREL KRW+NHKVMVRWLSRFF+YLDRYFIARRSLP LNEVGLTCFRDLVY E+H KV+ AVIAL
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIAL 155
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|6495 (AT1G43140.1 | Cullin family protein | Chr1:16232785-16236109 FORWARD LENGTH=721 | 201606) HSP 1 Score: 211.075 bits (536), Expect = 5.973e-65 Identity = 92/155 (59.35%), Postives = 120/155 (77.42%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
M ++ I L++GW M G+ KL+RILE L EPPF +Y+ LYT IY+MC Q+PP+DYSQ+LY+KYR + Y TVLPS+RE+H E+MLRELVKRWANHK++VRWLSRF YLDR+++ARR LP LN+VG T F DLVYQE+ + +D ++AL
Sbjct: 10 MMKELILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYSQELYNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDRFYVARRGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLAL 164
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|413 (AT1G02980.2 | cullin 2 | Chr1:677869-681212 FORWARD LENGTH=742 | 201606) HSP 1 Score: 199.519 bits (506), Expect = 1.665e-60 Identity = 90/156 (57.69%), Postives = 116/156 (74.36%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLP-EPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
M +K L+ GW M G+ KL++ILE +P EPPF + M LYTT++N+CTQKPP+DYSQQ+YD+Y + +Y TVLP++REKH E+MLRELVKRWAN K++VRWLS FF YLDR++ R S P L+ VG FRDLVYQE+ K +DAV+AL
Sbjct: 1 MAKKDSVLEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYSQQIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFYTRRGSHPTLSAVGFISFRDLVYQELQSKAKDAVLAL 156
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|412 (AT1G02980.1 | cullin 2 | Chr1:677869-681212 FORWARD LENGTH=742 | 201606) HSP 1 Score: 199.519 bits (506), Expect = 1.665e-60 Identity = 90/156 (57.69%), Postives = 116/156 (74.36%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLP-EPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
M +K L+ GW M G+ KL++ILE +P EPPF + M LYTT++N+CTQKPP+DYSQQ+YD+Y + +Y TVLP++REKH E+MLRELVKRWAN K++VRWLS FF YLDR++ R S P L+ VG FRDLVYQE+ K +DAV+AL
Sbjct: 1 MAKKDSVLEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYSQQIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFYTRRGSHPTLSAVGFISFRDLVYQELQSKAKDAVLAL 156
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|8744 (AT1G59790.2 | Cullin family protein | Chr1:22001504-22003462 FORWARD LENGTH=373 | 201606) HSP 1 Score: 190.274 bits (482), Expect = 5.101e-60 Identity = 92/154 (59.74%), Postives = 114/154 (74.03%), Query Frame = 0
Query: 4 KTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS--LPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
+ I+ ++GW + KGITKL RILEG PEP F E LYT IY+MC Q+ DYSQQLY+KYR+ E+Y TVLPSLREKHDE MLRELVKRW NHK+MV+WLS+FF Y+DR+ + R +P+L+EVGLTCF DLVY E+ ++ VIAL
Sbjct: 10 RQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRS--DYSQQLYEKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVRRSKIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIAL 161
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|8743 (AT1G59790.1 | Cullin family protein | Chr1:22001504-22003385 FORWARD LENGTH=374 | 201606) HSP 1 Score: 190.274 bits (482), Expect = 6.705e-60 Identity = 92/154 (59.74%), Postives = 114/154 (74.03%), Query Frame = 0
Query: 4 KTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS--LPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
+ I+ ++GW + KGITKL RILEG PEP F E LYT IY+MC Q+ DYSQQLY+KYR+ E+Y TVLPSLREKHDE MLRELVKRW NHK+MV+WLS+FF Y+DR+ + R +P+L+EVGLTCF DLVY E+ ++ VIAL
Sbjct: 10 RQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRS--DYSQQLYEKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVRRSKIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIAL 161
BLAST of Gothu.00031342-RA vs. Araport11
Match: gnl|BL_ORD_ID|8745 (AT1G59800.1 | Cullin family protein | Chr1:22004964-22006172 FORWARD LENGTH=255 | 201606) HSP 1 Score: 159.458 bits (402), Expect = 2.238e-49 Identity = 78/150 (52.00%), Postives = 100/150 (66.67%), Query Frame = 0
Query: 6 IELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
I+ + W + +G TKL R++EG EP F+ E MM++T Y +C K P QQLYDKYRE E Y TVLPSLREKHDE MLREL KRW HK++VR SR YLD F++++ LP+L EVGL CFRD VY+E+ +A++AL
Sbjct: 7 IKFEVEWSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRICAYKNP----QQLYDKYRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKKGLPSLREVGLNCFRDQVYREMQSMAAEAILAL 152
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|1344096370|gb|PPD71503.1| (hypothetical protein GOBAR_DD31593 [Gossypium barbadense]) HSP 1 Score: 332.413 bits (851), Expect = 4.728e-108 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|823202778|ref|XP_012435927.1| (PREDICTED: cullin-1 [Gossypium raimondii] >gi|823202781|ref|XP_012435928.1| PREDICTED: cullin-1 [Gossypium raimondii] >gi|763780004|gb|KJB47075.1| hypothetical protein B456_008G009700 [Gossypium raimondii] >gi|763780005|gb|KJB47076.1| hypothetical protein B456_008G009700 [Gossypium raimondii]) HSP 1 Score: 332.413 bits (851), Expect = 7.048e-108 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|1028963207|ref|XP_016725102.1| (PREDICTED: cullin-1-like [Gossypium hirsutum] >gi|1028963209|ref|XP_016725103.1| PREDICTED: cullin-1-like [Gossypium hirsutum]) HSP 1 Score: 332.413 bits (851), Expect = 7.846e-108 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|1050629740|ref|XP_017637801.1| (PREDICTED: cullin-1 [Gossypium arboreum] >gi|1050629742|ref|XP_017637802.1| PREDICTED: cullin-1 [Gossypium arboreum]) HSP 1 Score: 332.413 bits (851), Expect = 8.191e-108 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|1029108407|ref|XP_016717039.1| (PREDICTED: cullin-1 [Gossypium hirsutum] >gi|1029108409|ref|XP_016717045.1| PREDICTED: cullin-1 [Gossypium hirsutum]) HSP 1 Score: 330.872 bits (847), Expect = 3.001e-107 Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDA IAL
Sbjct: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAAIAL 155
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|823188213|ref|XP_012490440.1| (PREDICTED: cullin-1-like isoform X4 [Gossypium raimondii]) HSP 1 Score: 313.538 bits (802), Expect = 1.753e-105 Identity = 147/155 (94.84%), Postives = 151/155 (97.42%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYMHKGI KL+RILEGLPEPPF+SEEYMMLYTTIYNMCTQKPP+DYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRW NHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEV KV+DAVIAL
Sbjct: 1 MERKTIELDQGWDYMHKGIKKLRRILEGLPEPPFTSEEYMMLYTTIYNMCTQKPPYDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWGNHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVCAKVKDAVIAL 155
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|1269955234|ref|XP_022727591.1| (cullin-1 isoform X4 [Durio zibethinus]) HSP 1 Score: 324.324 bits (830), Expect = 9.527e-105 Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYM KGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVY+EVH+KVRDAVI L
Sbjct: 1 MERKTIELDQGWDYMQKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYREVHDKVRDAVIVL 155
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|1269955236|ref|XP_022727592.1| (cullin-1 isoform X5 [Durio zibethinus]) HSP 1 Score: 324.324 bits (830), Expect = 1.259e-104 Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYM KGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVY+EVH+KVRDAVI L
Sbjct: 1 MERKTIELDQGWDYMQKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYREVHDKVRDAVIVL 155
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|1269955230|ref|XP_022727589.1| (cullin-1 isoform X2 [Durio zibethinus]) HSP 1 Score: 324.709 bits (831), Expect = 5.111e-104 Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYM KGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVY+EVH+KVRDAVI L
Sbjct: 1 MERKTIELDQGWDYMQKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYREVHDKVRDAVIVL 155
BLAST of Gothu.00031342-RA vs. NCBI nr
Match: gi|1269955232|ref|XP_022727590.1| (cullin-1 isoform X3 [Durio zibethinus]) HSP 1 Score: 324.324 bits (830), Expect = 6.814e-104 Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0
Query: 1 MERKTIELDQGWDYMHKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYQEVHEKVRDAVIAL 155
MERKTIELDQGWDYM KGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVY+EVH+KVRDAVI L
Sbjct: 1 MERKTIELDQGWDYMQKGITKLKRILEGLPEPPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDLVYREVHDKVRDAVIVL 155 The following BLAST results are available for this feature:
BLAST of Gothu.00031342-RA vs. ExPASy TrEMBL
Analysis Date: 2020-02-21 (BLASTP of ISU_v1_a1 Gossypium thurberii proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Gothu.00031342-RA vs. ExPASy Swiss-Prot
Analysis Date: 2020-02-21 (BLASTP of ISU_v1_a1 Gossypium thurberii proteins vs UniProt Swissprot) Total hits: 10
BLAST of Gothu.00031342-RA vs. Araport11
Analysis Date: 2020-02-21 (BLASTP of ISU_v1_a1 Gossypium thurberii proteins vs arabidopsis Araport11) Total hits: 10
BLAST of Gothu.00031342-RA vs. NCBI nr
Analysis Date: 2020-02-21 (BLASTP of ISU_v1_a1 Gossypium thurberii proteins vs NCBI nr) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for ISU_v1_a1 Gossypium thurberii proteins
Date Performed: 2020-02-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >Gothu.00031342-RA_ISU-D1_v1 ID=Gothu.00031342-RA_ISU-D1_v1; Name=Gothu.00031342-RA; organism=Gossypium thurberi; type=mRNA; length=465bpback to top protein sequence of Gothu.00031342-RA_ISU-D1_v1 >Gothu.00031342-RA_ISU-D1_v1 ID=Gothu.00031342-RA_ISU-D1_v1; Name=Gothu.00031342-RA_ISU-D1_v1; organism=Gossypium thurberi; type=polypeptide; length=155bpback to top mRNA from alignment at CM013383.1_chr06:32861033..32862000+ Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below.>Gothu.00031342-RA_ISU-D1_v1 ID=Gothu.00031342-RA_ISU-D1_v1; Name=Gothu.00031342-RA; organism=Gossypium thurberi; type=mRNA; length=968bp; location=Sequence derived from: CM013383.1_chr06:32861033..32862000+ (Gossypium thurberiback to top Coding sequence (CDS) from alignment at CM013383.1_chr06:32861033..32862000+ >Gothu.00031342-RA_ISU-D1_v1 ID=Gothu.00031342-RA_ISU-D1_v1; Name=Gothu.00031342-RA; organism=Gossypium thurberi; type=CDS; length=873bp; location=Sequence derived from: CM013383.1_chr06:32861033..32862000+ (Gossypium thurberiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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