GH_A13G0411, GH_A13G0411_ZJU-AD1_v2.1.a1 (mRNA) Gossypium hirsutum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|1029014703|ref|XP_016671236.1| (PREDICTED: cyclin-H1-1-like [Gossypium hirsutum] >gi|1029015607|ref|XP_016671691.1| PREDICTED: cyclin-H1-1-like [Gossypium hirsutum] >gi|1029020657|ref|XP_016674184.1| PREDICTED: cyclin-H1-1-like [Gossypium hirsutum] >gi|1029023969|ref|XP_016675806.1| PREDICTED: cyclin-H1-1-like [Gossypium hirsutum] >gi|1029065066|ref|XP_016692808.1| PREDICTED: cyclin-H1-1-like [Gossypium hirsutum]) HSP 1 Score: 381.719 bits (979), Expect = 1.008e-132 Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|1028939722|ref|XP_016713069.1| (PREDICTED: cyclin-H1-1-like [Gossypium hirsutum] >gi|1028939724|ref|XP_016713070.1| PREDICTED: cyclin-H1-1-like [Gossypium hirsutum] >gi|1029078996|ref|XP_016699648.1| PREDICTED: cyclin-H1-1-like [Gossypium hirsutum]) HSP 1 Score: 381.333 bits (978), Expect = 1.128e-132 Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|1029116077|ref|XP_016736492.1| (PREDICTED: cyclin-H1-1-like [Gossypium hirsutum]) HSP 1 Score: 381.333 bits (978), Expect = 2.022e-132 Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|1029077382|ref|XP_016698890.1| (PREDICTED: cyclin-H1-1-like [Gossypium hirsutum]) HSP 1 Score: 379.793 bits (974), Expect = 2.301e-131 Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEE+GKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEEIGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|763778131|gb|KJB45254.1| (hypothetical protein B456_007G298500 [Gossypium raimondii]) HSP 1 Score: 377.867 bits (969), Expect = 2.155e-130 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIV QSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|1347683976|gb|PPR86727.1| (hypothetical protein GOBAR_AA33967 [Gossypium barbadense]) HSP 1 Score: 380.563 bits (976), Expect = 5.512e-130 Identity = 179/182 (98.35%), Postives = 179/182 (98.35%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIV QSLEFDLIVYAPY SVE Sbjct: 20 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRSVE 201
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|1028941303|ref|XP_016713864.1| (PREDICTED: cyclin-H1-1 isoform X1 [Gossypium hirsutum]) HSP 1 Score: 379.407 bits (973), Expect = 7.364e-130 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFH STHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHASTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|1028941305|ref|XP_016713866.1| (PREDICTED: cyclin-H1-1 isoform X2 [Gossypium hirsutum]) HSP 1 Score: 379.407 bits (973), Expect = 8.384e-130 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFH STHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHASTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|1050609617|ref|XP_017627424.1| (PREDICTED: cyclin-H1-1 isoform X1 [Gossypium arboreum] >gi|728832055|gb|KHG11498.1| Cyclin-H1-1 -like protein [Gossypium arboreum]) HSP 1 Score: 378.637 bits (971), Expect = 1.655e-129 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIV QSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. NCBI nr
Match: gi|763778130|gb|KJB45253.1| (hypothetical protein B456_007G298500 [Gossypium raimondii]) HSP 1 Score: 378.637 bits (971), Expect = 1.670e-129 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIV QSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CCH11_ARATH (Cyclin-H1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCH1-1 PE=1 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 2.019e-95 Identity = 136/184 (73.91%), Postives = 157/184 (85.33%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI--ERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADF TST RA WIF+PQ+L E+YKAANQRA+Q LEK GTTQ+EVDA GSL+YP+ D ADK + KPL+ +EE+FMR FYE K++EVCSAF FP+KIQATAL YFKRFYLQWSVM+HHPK IMLTCVYAACKIEENHVSAEE+GKGI+QDH++IL YEM V QSLEFDLIVYAPY ++E Sbjct: 1 MADFQTSTQRAKWIFTPQKLAERYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGSGDQADK--KLKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEENHVSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYAPYRAIE 182
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CCH11_ORYSJ (Cyclin-H1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCH1-1 PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 3.761e-91 Identity = 129/183 (70.49%), Postives = 154/183 (84.15%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVD-ADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADF TSTHR WIF +L++++ AANQRA + L +YGTT+++VD DGSLSYPEP D+ S KPL+ EEE+ MRVFYE K++EVCSAF FP+KIQATA+IYFKRFYLQWSVMEHHPKHIMLTC+Y++CK+EENHVSAEELGKGI QDHQ+ILN EMIV +SL+FDLIVYAPY S+E Sbjct: 1 MADFRTSTHRERWIFQTNDLMDRWGAANQRATETLVQYGTTRLKVDPVDGSLSYPEPAP-DHVVGSSGVKPLSCEEERLMRVFYEQKIQEVCSAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEENHVSAEELGKGIQQDHQIILNNEMIVLKSLDFDLIVYAPYRSIE 182
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CCNH_MACFA (Cyclin-H OS=Macaca fascicularis OX=9541 GN=CCNH PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.953e-24 Identity = 63/188 (33.51%), Postives = 95/188 (50.53%), Query Frame = 0 Query: 4 FHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAF--YFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 +H S+ + +W FS +E + + +A R + + A+G + +P+ L EE + +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PY E Sbjct: 2 YHNSSQKRHWTFSSEEQLARLRADANRKFRC---------KAVANGKVLPNDPVF------------LEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFE 168
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CCNH_HUMAN (Cyclin-H OS=Homo sapiens OX=9606 GN=CCNH PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.394e-24 Identity = 63/188 (33.51%), Postives = 95/188 (50.53%), Query Frame = 0 Query: 4 FHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAF--YFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 +H S+ + +W FS +E + + +A R + + A+G + +P+ L EE + +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PY E Sbjct: 2 YHNSSQKRHWTFSSEEQLARLRADANRKFRC---------KAVANGKVLPNDPVF------------LEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFE 168
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CCNH_MOUSE (Cyclin-H OS=Mus musculus OX=10090 GN=Ccnh PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.426e-23 Identity = 62/188 (32.98%), Postives = 96/188 (51.06%), Query Frame = 0 Query: 4 FHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAF--YFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 +H+S+ + +W F+ +E + + +A R + + A+G + +P+ L EE + +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PY E Sbjct: 2 YHSSSQKRHWTFASEEQLARLRADANRKFKC---------KAVANGKVLPNDPVF------------LEPHEELTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQERALEQILEYELLLIQQLNFHLIVHNPYRPFE 168
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CCNH_RAT (Cyclin-H OS=Rattus norvegicus OX=10116 GN=Ccnh PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.261e-23 Identity = 62/188 (32.98%), Postives = 95/188 (50.53%), Query Frame = 0 Query: 4 FHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAF--YFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 +H S+ + +W F+ +E + + +A R + + A+G + +P+ L EE + +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PY E Sbjct: 2 YHNSSQKRHWTFASEEQLARLRADANRKFKC---------KAVANGKVLPNDPLF------------LEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFE 168
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CCNH_BOVIN (Cyclin-H OS=Bos taurus OX=9913 GN=CCNH PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.323e-23 Identity = 62/188 (32.98%), Postives = 95/188 (50.53%), Query Frame = 0 Query: 4 FHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAF--YFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 +H S+ + +W F+ +E + + +A R + + A+G + +P+ L EE + +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PY E Sbjct: 2 YHNSSQKRHWTFASEEQLARLRADANRKFKC---------KAVANGKVLPNDPVF------------LEPHEEITLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKTLEQILEYELLLIQQLNFHLIVHNPYRPFE 168
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CCNH_XENLA (Cyclin-H OS=Xenopus laevis OX=8355 GN=ccnh PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.425e-22 Identity = 66/188 (35.11%), Postives = 96/188 (51.06%), Query Frame = 0 Query: 4 FHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAF--YFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEE----LGK---GISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 +H ST + +W F ++ +R IQA ++ Y I + S L EE + +YE +L + C+AF P + TA +YFKRFYL SVMEHHP+ IMLTCV+ ACK++E +VS+ + LG+ G + + IL YE+++ Q L F LIV+ PY E Sbjct: 2 YHNSTQKKHWTFLSED------EPLRRRIQA---------------NVRYRARIRATEKPRLSEIFSLEPHEELAICKYYEKRLLDFCNAFKPTMPKSVLGTACMYFKRFYLNNSVMEHHPRIIMLTCVFLACKVDEFNVSSIQFVGNLGENPLGQEKILEQILEYELLLIQQLNFHLIVHNPYRPFE 168
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CCNH_DICDI (Putative cyclin-H OS=Dictyostelium discoideum OX=44689 GN=cycH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.068e-20 Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 0 Query: 66 SRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY 178 S P L+ ++E + +YE K E+ A P+K+ A A+IY KRFYL+ S+M++ K +ML+C++ ACK E+NH+ + I N E+I+ +SL F+LIVY P+ Sbjct: 41 SEPNILSPDDELSLIHYYETKTLEIAMALNLPDKVSAPAIIYIKRFYLKNSIMQYGAKLVMLSCLFIACKTEDNHLDIDYYSNITKASPSDITNLEIIILESLNFNLIVYHPF 153
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Match: CGM2_SCHPO (Cyclin mcs2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mcs2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.477e-20 Identity = 53/180 (29.44%), Postives = 94/180 (52.22%), Query Frame = 0 Query: 4 FHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDH-QMILNYEMIVSQSLEFDLIVYAPYHSVE 182 F STH +WIF+ ++L + N++ + + ++ ++ A P L +EEE + +Y +L + SA P I++TA+++FKRFYL SVME+ PK I T ++ A K ++++S E+ K + + + +L YE V QSL++DL V+ P+ ++ Sbjct: 6 FRDSTHYRDWIFTEEDLSKTRAKVNEKFTNIVRERMLEELS------------LQNKEASLEVLPPTLTVEEELELVNYYSFQLNALSSALSLPTHIRSTAILFFKRFYLINSVMEYSPKIISFTSLFLATKCNDHYISIEQFCKNMPKTTPEEVLEYEFNVCQSLKWDLYVWLPFRPLQ 173
BLAST of GH_A13G0411 vs. TAIR10
Match: AT5G27620.1 (| Symbols: CYCH;1 | cyclin H;1 | chr5:9771762-9774684 FORWARD LENGTH=336) HSP 1 Score: 286.189 bits (731), Expect = 1.457e-96 Identity = 136/184 (73.91%), Postives = 157/184 (85.33%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI--ERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADF TST RA WIF+PQ+L E+YKAANQRA+Q LEK GTTQ+EVDA GSL+YP+ D ADK + KPL+ +EE+FMR FYE K++EVCSAF FP+KIQATAL YFKRFYLQWSVM+HHPK IMLTCVYAACKIEENHVSAEE+GKGI+QDH++IL YEM V QSLEFDLIVYAPY ++E Sbjct: 1 MADFQTSTQRAKWIFTPQKLAERYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGSGDQADK--KLKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEENHVSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYAPYRAIE 182
BLAST of GH_A13G0411 vs. TAIR10
Match: AT5G48640.1 (| Symbols: | Cyclin family protein | chr5:19723653-19725641 REVERSE LENGTH=253) HSP 1 Score: 61.6178 bits (148), Expect = 2.890e-11 Identity = 38/138 (27.54%), Postives = 73/138 (52.90%), Query Frame = 0 Query: 55 EPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQ---------DHQMILNYEMIVSQSLEFDLIVYAPYHSVEE 183 +P E D + + ++I++ + ++ N + ++ ++ ATA+ Y +R Y++ S++E P+ + LTC+Y A K EE+ V A L I + + + IL EM V ++L++ L+V+ PY S+ E Sbjct: 16 DPEEVDVVHDLDKERGISIDDFKLIKFHMSNHIMKLAQHIKVRQRVVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRLYPDEYNKYELKDILGMEMKVLEALDYYLVVFHPYRSLSE 153
BLAST of GH_A13G0411 vs. TAIR10
Match: AT5G48630.1 (| Symbols: | Cyclin family protein | chr5:19721663-19723200 REVERSE LENGTH=253) HSP 1 Score: 60.4622 bits (145), Expect = 8.552e-11 Identity = 37/124 (29.84%), Postives = 68/124 (54.84%), Query Frame = 0 Query: 69 KPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEEL---GKGISQDHQM------ILNYEMIVSQSLEFDLIVYAPYHSVEE 183 + +++E+ + +++ N + ++ ++ ATA+ Y +R Y + S+ E+ P+ + TC+Y ACK EE+ V A+ L K + D + IL EM V ++L F L+V+ PY S+ E Sbjct: 30 RGISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKLLVFYMKKLYADEKFRYEIKDILEMEMKVLEALNFYLVVFHPYRSLPE 153
BLAST of GH_A13G0411 vs. TAIR10
Match: AT5G48630.2 (| Symbols: | Cyclin family protein | chr5:19721663-19723119 REVERSE LENGTH=256) HSP 1 Score: 59.6918 bits (143), Expect = 1.369e-10 Identity = 37/124 (29.84%), Postives = 68/124 (54.84%), Query Frame = 0 Query: 69 KPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEEL---GKGISQDHQM------ILNYEMIVSQSLEFDLIVYAPYHSVEE 183 + +++E+ + +++ N + ++ ++ ATA+ Y +R Y + S+ E+ P+ + TC+Y ACK EE+ V A+ L K + D + IL EM V ++L F L+V+ PY S+ E Sbjct: 33 RGISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKLLVFYMKKLYADEKFRYEIKDILEMEMKVLEALNFYLVVFHPYRSLPE 156
BLAST of GH_A13G0411 vs. TAIR10
Match: AT5G45190.1 (| Symbols: | Cyclin family protein | chr5:18277808-18280733 REVERSE LENGTH=579) HSP 1 Score: 56.225 bits (134), Expect = 4.464e-9 Identity = 43/140 (30.71%), Postives = 68/140 (48.57%), Query Frame = 0 Query: 66 SRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEEN--------HVSAEELGK---GIS----------QDHQMILNYEMIVSQSLEFDLIVYAPYHSVEEA 184 SR +++++E ++R Y L+++ P ATA+I+ RF+ + S ++ + I C++ A K+EE VS E + K G S Q ++ILN E IV +L FDL VY PY + EA Sbjct: 46 SRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEA 185
BLAST of GH_A13G0411 vs. TAIR10
Match: AT1G35440.1 (| Symbols: CYCT1;1 | cyclin T1;1 | chr1:13035294-13036037 REVERSE LENGTH=247) HSP 1 Score: 53.1434 bits (126), Expect = 2.522e-8 Identity = 37/130 (28.46%), Postives = 62/130 (47.69%), Query Frame = 0 Query: 66 SRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSA--------------EELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSV 181 SR +N++EE F R Y + L+E+ P K ATA++ +RF+ + S+ ++ PK + + C++ A K+E + A E L + +L E +V +LE DL + PY V Sbjct: 20 SRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPLRDVFERLKMTVLTGEKLVLSTLECDLEIEHPYKLV 149
BLAST of GH_A13G0411 vs. TAIR10
Match: AT4G19600.1 (| Symbols: CYCT1;4 | Cyclin family protein | chr4:10673619-10676532 FORWARD LENGTH=541) HSP 1 Score: 53.1434 bits (126), Expect = 4.643e-8 Identity = 37/140 (26.43%), Postives = 67/140 (47.86%), Query Frame = 0 Query: 66 SRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEE-------------------NHVSAEELGKG--ISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVEEA 184 SR +++++E ++R Y L+++ P ATA+I+ RF+++ S + + I C++ A K+EE + +A+++ + Q ++ILN E IV +L FD VY PY + EA Sbjct: 46 SRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKDPTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEA 185
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A1U8JVK7_GOSHI (cyclin-H1-1-like OS=Gossypium hirsutum OX=3635 GN=LOC107909694 PE=3 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 8.467e-133 Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A1U8LIQ0_GOSHI (cyclin-H1-1-like OS=Gossypium hirsutum OX=3635 GN=LOC107926690 PE=3 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 9.475e-133 Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A1U8NBU7_GOSHI (cyclin-H1-1-like OS=Gossypium hirsutum OX=3635 GN=LOC107946606 PE=3 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 1.699e-132 Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A1U8K8R2_GOSHI (cyclin-H1-1-like OS=Gossypium hirsutum OX=3635 GN=LOC107914476 PE=3 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 1.933e-131 Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEE+GKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEEIGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A0D2SM02_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G298500 PE=3 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 1.810e-130 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIV QSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A2P5W6P1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA33967 PE=3 SV=1) HSP 1 Score: 380.563 bits (976), Expect = 4.630e-130 Identity = 179/182 (98.35%), Postives = 179/182 (98.35%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIV QSLEFDLIVYAPY SVE Sbjct: 20 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRSVE 201
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A1U8LL14_GOSHI (cyclin-H1-1 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107927309 PE=3 SV=1) HSP 1 Score: 379.407 bits (973), Expect = 6.186e-130 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFH STHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHASTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A1U8LGZ0_GOSHI (cyclin-H1-1 isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107927309 PE=3 SV=1) HSP 1 Score: 379.407 bits (973), Expect = 7.043e-130 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFH STHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPY SVE Sbjct: 1 MADFHASTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A0B0NAC6_GOSAR (Cyclin-H1-1-like protein OS=Gossypium arboreum OX=29729 GN=F383_11486 PE=3 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 1.390e-129 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIV QSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRSVE 182
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Match: A0A0D2R1P4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G298500 PE=3 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 1.403e-129 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0 Query: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQALEKYGTTQMEVDADGSLSYPEPIERDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVSQSLEFDLIVYAPYHSVE 182 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQ LEKYGTTQMEVDADGSLSYPEPI RDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIV QSLEFDLIVYAPY SVE Sbjct: 1 MADFHTSTHRANWIFSPQELVEKYKAANQRAIQTLEKYGTTQMEVDADGSLSYPEPIARDNADKHSRPKPLNIEEEQFMRVFYENKLREVCSAFYFPNKIQATALIYFKRFYLQWSVMEHHPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRSVE 182 The following BLAST results are available for this feature:
BLAST of GH_A13G0411 vs. NCBI nr
Analysis Date: 2019-03-25 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs NCBI nr) Total hits: 10
BLAST of GH_A13G0411 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-25 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs UniProt Swissprot) Total hits: 10
BLAST of GH_A13G0411 vs. TAIR10
Analysis Date: 2019-03-25 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs arabidopsis TAIR10) Total hits: 7
BLAST of GH_A13G0411 vs. ExPASy TrEMBL
Analysis Date: 2019-03-29 (BLASTP of ZJU v2.1 Gossypium hirsutum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for ZJU v2.1 Gossypium hirsutum proteins
Date Performed: 2019-03-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >GH_A13G0411_ZJU-AD1_v2.1.a1 ID=GH_A13G0411_ZJU-AD1_v2.1.a1; Name=GH_A13G0411; organism=Gossypium hirsutum; type=mRNA; length=747bpback to top protein sequence of GH_A13G0411_ZJU-AD1_v2.1.a1 >GH_A13G0411_ZJU-AD1_v2.1.a1 ID=GH_A13G0411_ZJU-AD1_v2.1.a1; Name=GH_A13G0411_ZJU-AD1_v2.1.a1; organism=Gossypium hirsutum; type=polypeptide; length=248bpback to top mRNA from alignment at A13:5027590..5029808+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>GH_A13G0411_ZJU-AD1_v2.1.a1 ID=GH_A13G0411_ZJU-AD1_v2.1.a1; Name=GH_A13G0411; organism=Gossypium hirsutum; type=mRNA; length=2219bp; location=Sequence derived from: A13:5027590..5029808+ (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at A13:5027590..5029808+ >GH_A13G0411_ZJU-AD1_v2.1.a1 ID=GH_A13G0411_ZJU-AD1_v2.1.a1; Name=GH_A13G0411; organism=Gossypium hirsutum; type=CDS; length=747bp; location=Sequence derived from: A13:5027590..5029808+ (Gossypium hirsutumback to top |