EVM_prediction_Ga14G1764, evm.model.Ga14G1764_CRI-A2_v1.0.a1 (mRNA) Gossypium arboreum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|1050635794|ref|XP_017640960.1| (PREDICTED: uncharacterized protein LOC108482348 [Gossypium arboreum]) HSP 1 Score: 326.25 bits (835), Expect = 3.666e-113 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI Sbjct: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|1347701675|gb|PPS00775.1| (hypothetical protein GOBAR_AA19879 [Gossypium barbadense]) HSP 1 Score: 318.546 bits (815), Expect = 4.352e-110 Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MGSKSLCNTCFLSSTTCF KHR RKPISTTTPKIFA RRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI Sbjct: 1 MGSKSLCNTCFLSSTTCFPKHRSRKPISTTTPKIFASRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|823254321|ref|XP_012459800.1| (PREDICTED: uncharacterized protein LOC105780174 [Gossypium raimondii] >gi|763811251|gb|KJB78153.1| hypothetical protein B456_012G181000 [Gossypium raimondii] >gi|1344091625|gb|PPD67657.1| hypothetical protein GOBAR_DD35469 [Gossypium barbadense]) HSP 1 Score: 314.309 bits (804), Expect = 2.190e-108 Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MGSKSLCNTCFLSST CF KHR RKPIST TPKIFA RRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETG+HI Sbjct: 1 MGSKSLCNTCFLSSTACFPKHRSRKPISTATPKIFAARRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGMHI 156
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|1029069286|ref|XP_016694871.1| (PREDICTED: uncharacterized protein LOC107911547 [Gossypium hirsutum]) HSP 1 Score: 313.153 bits (801), Expect = 6.856e-108 Identity = 149/156 (95.51%), Postives = 151/156 (96.79%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MGSKSLCNTCFLSST CF KHR RKPIST TPKIFA RRSDNDDLSCSGVGGGGRR+LVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETG+HI Sbjct: 1 MGSKSLCNTCFLSSTACFPKHRSRKPISTATPKIFAARRSDNDDLSCSGVGGGGRRQLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGMHI 156
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|1269952221|ref|XP_022725978.1| (uncharacterized protein LOC111282234 [Durio zibethinus]) HSP 1 Score: 192.971 bits (489), Expect = 1.444e-60 Identity = 100/156 (64.10%), Postives = 115/156 (73.72%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 M S SL L S TCF H K IS KI A+RRS+ D +CS RRLVDENMIVLRKRIHE+KMI+RNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGM+A++MLS+P +AA H +E+ K ++ IH+ Sbjct: 1 MESTSLSFNPSLCSRTCFQNHHRNKAISR---KILAMRRSEAHDQNCS-------RRLVDENMIVLRKRIHELKMIQRNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMLALIMLSVPTAAALTFFHLMEITKGVV-AAIHL 145
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|590696092|ref|XP_007045071.1| (PREDICTED: uncharacterized protein LOC18609739 [Theobroma cacao] >gi|508709006|gb|EOY00903.1| Mediator of RNA polymerase II transcription subunit 18, putative [Theobroma cacao]) HSP 1 Score: 190.66 bits (483), Expect = 1.673e-59 Identity = 94/146 (64.38%), Postives = 113/146 (77.40%), Query Frame = 0 Query: 11 FLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 F SS TC HR RK IS T FA+RR +D +CSG RLVDENMIVLRKR+HE+KMIERNYEPPA+WMEWEKRYYTSYDSIICD +GVLQ+QLMNTRPSLALGM+A+++LS+P SAA + H +E+ K ++ GIH+ Sbjct: 16 FRSSRTCLRNHRQRKAISMKT---FAMRREAHDQ-NCSG-------RLVDENMIVLRKRLHELKMIERNYEPPANWMEWEKRYYTSYDSIICDAMGVLQTQLMNTRPSLALGMLALIVLSVPTSAAVMFFHVMEITKGVLVAGIHM 150
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|1204920744|ref|XP_021293257.1| (uncharacterized protein LOC110423366 [Herrania umbratica]) HSP 1 Score: 188.734 bits (478), Expect = 8.091e-59 Identity = 95/146 (65.07%), Postives = 113/146 (77.40%), Query Frame = 0 Query: 11 FLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 F SS TC HR RK IS T FA+RR +D +CSG RLVDENMIVLRKR+HE+KMIERNYEPPA+WMEWEKR YTSYDSIICDV+GVLQSQLMNTRPSLALGM+A+++LS+P SAA + H +E+ K ++ GIH+ Sbjct: 16 FSSSRTCLRNHRQRKAISMKT---FAMRREAHDQ-NCSG-------RLVDENMIVLRKRLHELKMIERNYEPPANWMEWEKRCYTSYDSIICDVMGVLQSQLMNTRPSLALGMLALIVLSVPTSAAVMFFHVMEITKGVLVAGIHM 150
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|1269927183|ref|XP_022775670.1| (uncharacterized protein LOC111317502 [Durio zibethinus]) HSP 1 Score: 187.578 bits (475), Expect = 2.637e-58 Identity = 94/146 (64.38%), Postives = 110/146 (75.34%), Query Frame = 0 Query: 11 FLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 F S T H +K IST KI A RRS+ D +CSG RLVDENMIVLRKRIHE+KMIE NYEPP DWMEWEKRYYTSYDSIICDVLGVLQSQLMN+RPSLALG++A++MLS+P S A + H +E +K I+ +GIH+ Sbjct: 16 FRCSRTRLQNHNRKKAIST---KIIATRRSEAHDQNCSG-------RLVDENMIVLRKRIHELKMIESNYEPPTDWMEWEKRYYTSYDSIICDVLGVLQSQLMNSRPSLALGILALIMLSVPTSTALMFFHLIETVKGIVVSGIHM 151
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|1137185577|gb|OMO60541.1| (hypothetical protein CCACVL1_24053 [Corchorus capsularis]) HSP 1 Score: 176.022 bits (445), Expect = 2.023e-54 Identity = 83/105 (79.05%), Postives = 94/105 (89.52%), Query Frame = 0 Query: 52 GGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 GGGR LVDENMIVLRKRIHE K+IERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGM+A++ LS+P SAAF+ H +EM K ++ +GIH+ Sbjct: 2 GGGR--LVDENMIVLRKRIHETKVIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMLALVTLSVPTSAAFMFFHFMEMAKGVVASGIHM 104
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Match: gi|1137222455|gb|OMO88103.1| (hypothetical protein COLO4_20457 [Corchorus olitorius]) HSP 1 Score: 162.155 bits (409), Expect = 5.763e-49 Identity = 74/94 (78.72%), Postives = 85/94 (90.43%), Query Frame = 0 Query: 63 MIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MIVLRKRIHE KMIERNYEPPADWMEWEKRYYTSYDS+ICDVLGVLQSQLMNTRPSLALGM+A++ LS+P SAAF+ H +EM K ++ +GIH+ Sbjct: 1 MIVLRKRIHETKMIERNYEPPADWMEWEKRYYTSYDSMICDVLGVLQSQLMNTRPSLALGMLALVTLSVPTSAAFMFFHFMEMAKGLVASGIHM 94
BLAST of EVM_prediction_Ga14G1764 vs. TAIR10
Match: AT2G01300.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:151221-151691 REVERSE LENGTH=156) HSP 1 Score: 132.109 bits (331), Expect = 5.229e-40 Identity = 57/107 (53.27%), Postives = 83/107 (77.57%), Query Frame = 0 Query: 52 GGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIM--ETGIHI 156 GGGR LVDENMIVLRKRIHE+KM+ERNYEPP+ WM+WEKR+Y SYDS+ICD +G+LQS LMN+RP++A+ + +++S+P S+ + ++++ ++ T H+ Sbjct: 51 GGGR--LVDENMIVLRKRIHEMKMVERNYEPPSHWMDWEKRFYNSYDSVICDSVGLLQSFLMNSRPTVAIATLLFLLVSVPVSSTVIAFRLIDLLHWLLAAATSAHV 155
BLAST of EVM_prediction_Ga14G1764 vs. TAIR10
Match: AT1G15010.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits to 71 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5171215-5171643 FORWARD LENGTH=142) HSP 1 Score: 122.865 bits (307), Expect = 1.551e-36 Identity = 52/90 (57.78%), Postives = 72/90 (80.00%), Query Frame = 0 Query: 47 CSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAA 136 C+ GGR VDENM+VLRKRIHE+KM+ERN+EPP+ WM+WEKR+Y +YD+ ICD L +LQ+ LMN+RPS+A G ++++S+P S+A Sbjct: 35 CADYYRGGRT--VDENMVVLRKRIHEMKMVERNFEPPSHWMQWEKRFYCNYDATICDALTLLQTFLMNSRPSVAFGTCLLLLVSVPVSSA 122
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: A0A2P5XBQ6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA19879 PE=4 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 3.656e-110 Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MGSKSLCNTCFLSSTTCF KHR RKPISTTTPKIFA RRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI Sbjct: 1 MGSKSLCNTCFLSSTTCFPKHRSRKPISTTTPKIFASRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: A0A2P5PZD5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD35469 PE=4 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 1.839e-108 Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MGSKSLCNTCFLSST CF KHR RKPIST TPKIFA RRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETG+HI Sbjct: 1 MGSKSLCNTCFLSSTACFPKHRSRKPISTATPKIFAARRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGMHI 156
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: A0A0D2TRI5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G181000 PE=4 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 1.839e-108 Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MGSKSLCNTCFLSST CF KHR RKPIST TPKIFA RRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETG+HI Sbjct: 1 MGSKSLCNTCFLSSTACFPKHRSRKPISTATPKIFAARRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGMHI 156
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: A0A1U8JX64_GOSHI (uncharacterized protein LOC107911547 OS=Gossypium hirsutum OX=3635 GN=LOC107911547 PE=4 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 5.759e-108 Identity = 149/156 (95.51%), Postives = 151/156 (96.79%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MGSKSLCNTCFLSST CF KHR RKPIST TPKIFA RRSDNDDLSCSGVGGGGRR+LVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETG+HI Sbjct: 1 MGSKSLCNTCFLSSTACFPKHRSRKPISTATPKIFAARRSDNDDLSCSGVGGGGRRQLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGMHI 156
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: A0A061E8B9_THECC (Mediator of RNA polymerase II transcription subunit 18, putative OS=Theobroma cacao OX=3641 GN=TCM_010818 PE=4 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.405e-59 Identity = 94/146 (64.38%), Postives = 113/146 (77.40%), Query Frame = 0 Query: 11 FLSSTTCFSKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 F SS TC HR RK IS T FA+RR +D +CSG RLVDENMIVLRKR+HE+KMIERNYEPPA+WMEWEKRYYTSYDSIICD +GVLQ+QLMNTRPSLALGM+A+++LS+P SAA + H +E+ K ++ GIH+ Sbjct: 16 FRSSRTCLRNHRQRKAISMKT---FAMRREAHDQ-NCSG-------RLVDENMIVLRKRLHELKMIERNYEPPANWMEWEKRYYTSYDSIICDAMGVLQTQLMNTRPSLALGMLALIVLSVPTSAAVMFFHVMEITKGVLVAGIHM 150
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: A0A1R3GR47_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_24053 PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.700e-54 Identity = 83/105 (79.05%), Postives = 94/105 (89.52%), Query Frame = 0 Query: 52 GGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 GGGR LVDENMIVLRKRIHE K+IERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGM+A++ LS+P SAAF+ H +EM K ++ +GIH+ Sbjct: 2 GGGR--LVDENMIVLRKRIHETKVIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMLALVTLSVPTSAAFMFFHFMEMAKGVVASGIHM 104
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: A0A1R3IZW0_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20457 PE=4 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 4.841e-49 Identity = 74/94 (78.72%), Postives = 85/94 (90.43%), Query Frame = 0 Query: 63 MIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 MIVLRKRIHE KMIERNYEPPADWMEWEKRYYTSYDS+ICDVLGVLQSQLMNTRPSLALGM+A++ LS+P SAAF+ H +EM K ++ +GIH+ Sbjct: 1 MIVLRKRIHETKMIERNYEPPADWMEWEKRYYTSYDSMICDVLGVLQSQLMNTRPSLALGMLALVTLSVPTSAAFMFFHFMEMAKGLVASGIHM 94
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: A0A2I4DFR0_JUGRE (uncharacterized protein LOC108979706 OS=Juglans regia OX=51240 GN=LOC108979706 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.309e-48 Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 0 Query: 19 SKHRFRKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIH 155 SKH P + +IFA R+ +D S R+VDENMIVLRKRIHE+KM+ERNYEPP+DWM+WEKR YTSYDS IC V+G LQSQ+MN+RPSL LGM+ +++LS+P SAA V H +E+I + + GIH Sbjct: 21 SKHGLHDPKRASRTRIFASRKEAHDQNHSS--------RMVDENMIVLRKRIHEMKMVERNYEPPSDWMDWEKRIYTSYDSFICGVMGFLQSQMMNSRPSLTLGMLVLIILSVPTSAAVVFFHLMEIIPKGILAGIH 149
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: A0A2H5PQM4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_158540 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.394e-48 Identity = 80/142 (56.34%), Postives = 104/142 (73.24%), Query Frame = 0 Query: 18 FSKHRFR-KPISTTTPKIFAL--RRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 F++ + R K +S + K++A RSD D +C G GG R RLVDENMIVLRKRIHE+KMIERNYEPP +WMEWEK+YYT YDS IC+ +GVLQ+QLMNTRPS ALG++A++ LS+P SAA + +E+ I+ H+ Sbjct: 17 FNRSKPRIKGVSLASRKVYASAGHRSDAHDKNCPG--GGPRHRLVDENMIVLRKRIHEMKMIERNYEPPENWMEWEKKYYTGYDSYICEAMGVLQAQLMNTRPSFALGVLALIALSVPTSAAVLCFRLMELTNGILAGIQHV 156
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Match: F6HFJ7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g04650 PE=4 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.250e-48 Identity = 89/161 (55.28%), Postives = 112/161 (69.57%), Query Frame = 0 Query: 1 MGSKSLCNTCFLSSTTCFSKHRF-----RKPISTTTPKIFALRRSDNDDLSCSGVGGGGRRRLVDENMIVLRKRIHEIKMIERNYEPPADWMEWEKRYYTSYDSIICDVLGVLQSQLMNTRPSLALGMVAVMMLSLPASAAFVVVHAVEMIKRIMETGIHI 156 M S LC+T FSK R +K STT ++ A RRSD+ + GGR LVDEN+IVLRKRIHE+KM+ERNYEPP DWMEWEK++YTSYD+ ICD +G+LQSQLMNTRPSL LGM+A++ LS+P SAA ++ H VE+ K + GIH+ Sbjct: 1 MESSCLCSTAL--PLGPFSKFRGGDDCGKKRGSTT--RVSAWRRSDHQN-------HGGR--LVDENLIVLRKRIHEMKMVERNYEPPEDWMEWEKQFYTSYDAFICDAMGLLQSQLMNTRPSLVLGMLAMITLSVPTSAALILGHFVEITKWVF-AGIHL 147 The following BLAST results are available for this feature:
BLAST of EVM_prediction_Ga14G1764 vs. NCBI nr
Analysis Date: 2019-03-07 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs NCBI nr) Total hits: 10
BLAST of EVM_prediction_Ga14G1764 vs. TAIR10
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs arabidopsis TAIR10) Total hits: 2
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt Swissprot) Total hits: 0
BLAST of EVM_prediction_Ga14G1764 vs. ExPASy TrEMBL
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for CRI v1.0 Gossypium arboreum proteins
Date Performed: 2019-03-06
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.Ga14G1764_CRI-A2_v1.0.a1 ID=evm.model.Ga14G1764_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga14G1764; organism=Gossypium arboreum; type=mRNA; length=471bpback to top protein sequence of evm.model.Ga14G1764_CRI-A2_v1.0.a1 >evm.model.Ga14G1764_CRI-A2_v1.0.a1 ID=evm.model.Ga14G1764_CRI-A2_v1.0.a1; Name=evm.model.Ga14G1764_CRI-A2_v1.0.a1; organism=Gossypium arboreum; type=polypeptide; length=156bpback to top mRNA from alignment at tig00015727_CRI-A2_v1.0.a1:583249..583719+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>evm.model.Ga14G1764_CRI-A2_v1.0.a1 ID=evm.model.Ga14G1764_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga14G1764; organism=Gossypium arboreum; type=mRNA; length=471bp; location=Sequence derived from: tig00015727_CRI-A2_v1.0.a1:583249..583719+ (Gossypium arboreumback to top Coding sequence (CDS) from alignment at tig00015727_CRI-A2_v1.0.a1:583249..583719+ >evm.model.Ga14G1764_CRI-A2_v1.0.a1 ID=evm.model.Ga14G1764_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga14G1764; organism=Gossypium arboreum; type=CDS; length=471bp; location=Sequence derived from: tig00015727_CRI-A2_v1.0.a1:583249..583719+ (Gossypium arboreumback to top |