EVM_prediction_Ga05G1420, evm.model.Ga05G1420_CRI-A2_v1.0.a1 (mRNA) Gossypium arboreum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|1347693106|gb|PPR93719.1| (hypothetical protein GOBAR_AA26950 [Gossypium barbadense]) HSP 1 Score: 448.358 bits (1152), Expect = 2.264e-153 Identity = 259/313 (82.75%), Postives = 261/313 (83.39%), Query Frame = 0
Query: 41 MSGPEEEKGKCSDLGQTVVHHVQEQEMEIEPLGAILMYELK----EIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQSTPVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKD-----------EVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDD 338
MSGPEEEK HVQEQEMEIEPLGAILMYELK EIHSGESGLSTSNRCFQIRFNSS VQLALIFSH EKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKD +VIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGA+PVREGYDEEDEEDIDLDNNDFE D
Sbjct: 1 MSGPEEEK-----------DHVQEQEMEIEPLGAILMYELKAFISEIHSGESGLSTSNRCFQIRFNSS-----------------------VQLALIFSHAEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEEELYHRTFSFQVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGASPVREGYDEEDEEDIDLDNNDFEGD 279
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|1063512544|ref|XP_017979398.1| (PREDICTED: RWD domain-containing protein 1 [Theobroma cacao]) HSP 1 Score: 345.895 bits (886), Expect = 5.745e-116 Identity = 217/306 (70.92%), Postives = 231/306 (75.49%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST-PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLSSKRTA 362
+ +VQEQEMEIE L AILM E KEIHSGESGLSTSNRCFQI + D+DTDQST PVQLALIFSHTEKYPDEPPLLNVKS IRGIQ+SDLKV+K KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQDA DNAEEEEA KDEVIVPHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA PV EG DEEDEEDID D++DFEDDEEDML+HYLAEK D+SS SSKRTA
Sbjct: 1 MTDYVQEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQITLSPQ--------------DDDTDQSTTPVQLALIFSHTEKYPDEPPLLNVKS--------IRGIQTSDLKVVKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDADADNAEEEEATKDEVIVPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLTGRQWFESGRATAKGAAPVNEGSDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDSSSHSSKRTA 254
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|823229326|ref|XP_012447405.1| (PREDICTED: RWD domain-containing protein 1-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 343.199 bits (879), Expect = 2.929e-114 Identity = 185/260 (71.15%), Postives = 194/260 (74.62%), Query Frame = 0
Query: 62 VQEQEMEIEPLGAILMYELK----EIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQSTPVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVR 317
+QEQEMEIE LGAI+M ELK EIHS ESGLSTSNRCFQI D DTDQSTPVQLAL+FSHTEKYP++PPLLNVKS IRG+QSSDLKVLKLKLEQE ASENLGMAMIYTLVSSAKEWLSERYGQDACPDNA+EEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKL+PESALTAPKEKKL GRQWFENGRASAKGA+PVR
Sbjct: 62 IQEQEMEIEALGAIVMDELKAFISEIHSDESGLSTSNRCFQITLTPQ--------------DVDTDQSTPVQLALVFSHTEKYPEQPPLLNVKS--------IRGMQSSDLKVLKLKLEQE------------------------------ASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAKEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLMPESALTAPKEKKLTGRQWFENGRASAKGASPVR 269
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|1269931925|ref|XP_022715111.1| (RWD domain-containing protein 1-like [Durio zibethinus]) HSP 1 Score: 338.576 bits (867), Expect = 5.009e-113 Identity = 213/307 (69.38%), Postives = 227/307 (73.94%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLSSKRTA 362
+ HVQEQEMEIE L AILM E KEIHSGESGLSTSNRCFQI + D+D DQST PVQLALIFSHTEKYPDEPPLLNVKS IRGI +SDLKVLK KLEQE ASENLGMAMIYTLV++AKEWLSERYGQDA DNAEEEE+ KDEVIVPHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+ KG PV EG DEEDEEDID D++DFEDDEEDML+HYLAEK D+SS SSKRTA
Sbjct: 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQITLSPQ--------------DDDADQSTTRPVQLALIFSHTEKYPDEPPLLNVKS--------IRGIHTSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTTAKEWLSERYGQDADADNAEEEESTKDEVIVPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLTGRQWFESGRATVKGGAPVTEGSDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDSSSHSSKRTA 255
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|823229328|ref|XP_012447406.1| (PREDICTED: RWD domain-containing protein 1-like isoform X2 [Gossypium raimondii]) HSP 1 Score: 335.495 bits (859), Expect = 1.478e-111 Identity = 198/276 (71.74%), Postives = 207/276 (75.00%), Query Frame = 0
Query: 67 MEIEPLGAILMYELK----EIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQSTPVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDD 338
MEIE LGAI+M ELK EIHS ESGLSTSNRCFQI D DTDQSTPVQLAL+FSHTEKYP++PPLLNVKS IRG+QSSDLKVLKLKLEQE ASENLGMAMIYTLVSSAKEWLSERYGQDACPDNA+EEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKL+PESALTAPKEKKL GRQWFENGRASAKGA+PVREG DEEDEEDIDLDN DF+ D
Sbjct: 1 MEIEALGAIVMDELKAFISEIHSDESGLSTSNRCFQITLTPQ--------------DVDTDQSTPVQLALVFSHTEKYPEQPPLLNVKS--------IRGMQSSDLKVLKLKLEQE------------------------------ASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAKEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLMPESALTAPKEKKLTGRQWFENGRASAKGASPVREGSDEEDEEDIDLDNYDFDGD 224
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|1050598469|ref|XP_017617852.1| (PREDICTED: RWD domain-containing protein 1-like [Gossypium arboreum] >gi|728831678|gb|KHG11121.1| RWD domain-containing 1 [Gossypium arboreum]) HSP 1 Score: 334.724 bits (857), Expect = 1.576e-111 Identity = 208/307 (67.75%), Postives = 224/307 (72.96%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLSSKRTA 362
+ H+QEQEMEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTEKYPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQD DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D+S+ SSKR A
Sbjct: 1 MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEKYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDVDADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDSSTHSSKRAA 255
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|1029128593|ref|XP_016742610.1| (PREDICTED: RWD domain-containing protein 1-like isoform X1 [Gossypium hirsutum]) HSP 1 Score: 332.798 bits (852), Expect = 9.542e-111 Identity = 207/307 (67.43%), Postives = 224/307 (72.96%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLSSKRTA 362
+ H+QEQEMEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTE+YPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQD DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D+S+ SSKR A
Sbjct: 1 MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEEYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDVDADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDSSTHSSKRAA 255
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|1269943961|ref|XP_022721497.1| (RWD domain-containing protein 1-like isoform X1 [Durio zibethinus]) HSP 1 Score: 329.331 bits (843), Expect = 2.210e-109 Identity = 210/307 (68.40%), Postives = 225/307 (73.29%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLSSKRTA 362
+ HVQEQEMEIE L AILM E KEIHSGESGLSTSNRCFQI + D+DTDQST PVQLAL+FSHTEKYPDE PLLNVKS IRGIQ++DLKVLK KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQDA +NAEEEEA KDEVIVPHGEPVTVDTF AWRERFEAELALERAKL+PESA A KEKKL GRQWFE+GRA+AKGA PV E D EDEEDID D++DFEDDEEDML+HYLAEK D+SS SSKRTA
Sbjct: 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQITLSPQ--------------DDDTDQSTSTPVQLALVFSHTEKYPDESPLLNVKS--------IRGIQTNDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDADANNAEEEEATKDEVIVPHGEPVTVDTFLAWRERFEAELALERAKLMPESAFMATKEKKLTGRQWFESGRATAKGAAPVSEESDVEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDSSSHSSKRTA 255
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|1029125320|ref|XP_016741050.1| (PREDICTED: RWD domain-containing protein 1-like isoform X1 [Gossypium hirsutum]) HSP 1 Score: 327.405 bits (838), Expect = 9.981e-109 Identity = 205/302 (67.88%), Postives = 220/302 (72.85%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLS 357
+ H+QEQEMEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTEKYPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQDA DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D S+ S
Sbjct: 1 MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEKYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDADADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDLSTHS 250
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Match: gi|823140552|ref|XP_012470125.1| (PREDICTED: RWD domain-containing protein 1 [Gossypium raimondii] >gi|763751174|gb|KJB18562.1| hypothetical protein B456_003G060200 [Gossypium raimondii]) HSP 1 Score: 325.865 bits (834), Expect = 3.696e-108 Identity = 204/302 (67.55%), Postives = 220/302 (72.85%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLS 357
+ H+QEQEMEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTEKYPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAK+WLSERYGQDA DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D S+ S
Sbjct: 1 MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEKYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKDWLSERYGQDADADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDLSTHS 250
BLAST of EVM_prediction_Ga05G1420 vs. TAIR10
Match: AT1G51730.1 (| Symbols: | Ubiquitin-conjugating enzyme family protein | chr1:19186812-19188638 REVERSE LENGTH=252) HSP 1 Score: 256.914 bits (655), Expect = 1.561e-84 Identity = 176/301 (58.47%), Postives = 202/301 (67.11%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPV-REGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSS 355
+ + QEQEMEIE L AILM E KEIHS ESGL+TSNRCFQI D++ ++ PVQLAL+FSHTE YPDE PLL+VKS IRGI SDL +LK KLEQE ASENLGMAMIYTLVSSAK+WLSE YGQD + AE E A +DEVIVPHGEPVT++TF AWRER+EAELALERAKL+PESALTAPKEKKL GRQWFE+GR +G + E +EEDEEDID ++ DFEDDEEDML+HYLAEK D+S+
Sbjct: 1 MTEYKQEQEMEIEALEAILMDEFKEIHSSESGLNTSNRCFQITVTPQ--------------DDELEELAIPPVQLALVFSHTENYPDEAPLLDVKS--------IRGIHVSDLTILKEKLEQE------------------------------ASENLGMAMIYTLVSSAKDWLSEHYGQDDAAEFAEVEAAKEDEVIVPHGEPVTLETFLAWRERYEAELALERAKLMPESALTAPKEKKLTGRQWFESGR--GRGTVVIADEEDEEEDEEDIDFEDEDFEDDEEDMLEHYLAEKSDSSA 247
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy Swiss-Prot
Match: RWDD1_RAT (RWD domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Rwdd1 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 5.298e-11 Identity = 57/181 (31.49%), Postives = 86/181 (47.51%), Query Frame = 0
Query: 128 VQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDAC----PDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFE 304
VQ L F+++EKYPDE PL + FS ++ +D+ +I+ LL L A ENLGM MI+TLV++ +E L+E Q +E+EA + E + HG PVT++ F +W+ +F+AEL + K + E + KL G+Q FE
Sbjct: 48 VQTTLKFTYSEKYPDEAPLYEI------FSQ--ENLEDNDVS--------DILKLL----------------------ALQAEENLGMVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKKLFHGTPVTIENFLSWKAKFDAELLEIKKKRMKEEEQAG--KNKLSGKQLFE 188
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy Swiss-Prot
Match: RWDD1_MOUSE (RWD domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rwdd1 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 5.400e-11 Identity = 57/181 (31.49%), Postives = 86/181 (47.51%), Query Frame = 0
Query: 128 VQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDAC----PDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFE 304
VQ L F+++EKYPDE PL + FS ++ +D+ +I+ LL L A ENLGM MI+TLV++ +E L+E Q +E+EA + E + HG PVT++ F +W+ +F+AEL + K + E + KL G+Q FE
Sbjct: 48 VQTTLKFTYSEKYPDETPLYEI------FSQ--ENLEDNDVS--------DILKLL----------------------ALQAEENLGMVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKKLFHGTPVTIENFLSWKAKFDAELLEIKKKRMKEEEQAG--KNKLSGKQLFE 188
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy Swiss-Prot
Match: RWDD1_HUMAN (RWD domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RWDD1 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.207e-10 Identity = 57/181 (31.49%), Postives = 85/181 (46.96%), Query Frame = 0
Query: 128 VQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDAC----PDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFE 304
VQ L F+++EKYPDE PL + FS ++ +D+ +I+ LL L A ENLGM MI+TLV++ +E L+E Q +E+EA + E + HG PVT++ F W+ +F+AEL + K + E + KL G+Q FE
Sbjct: 48 VQTTLKFTYSEKYPDEAPLYEI------FSQ--ENLEDNDVS--------DILKLL----------------------ALQAEENLGMVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEEQAG--KNKLSGKQLFE 188
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A2P5WRJ5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA26950 PE=4 SV=1) HSP 1 Score: 448.358 bits (1152), Expect = 1.902e-153 Identity = 259/313 (82.75%), Postives = 261/313 (83.39%), Query Frame = 0
Query: 41 MSGPEEEKGKCSDLGQTVVHHVQEQEMEIEPLGAILMYELK----EIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQSTPVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKD-----------EVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDD 338
MSGPEEEK HVQEQEMEIEPLGAILMYELK EIHSGESGLSTSNRCFQIRFNSS VQLALIFSH EKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKD +VIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGA+PVREGYDEEDEEDIDLDNNDFE D
Sbjct: 1 MSGPEEEK-----------DHVQEQEMEIEPLGAILMYELKAFISEIHSGESGLSTSNRCFQIRFNSS-----------------------VQLALIFSHAEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEEELYHRTFSFQVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGASPVREGYDEEDEEDIDLDNNDFEGD 279
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A0B0NJ46_GOSAR (RWD domain-containing 1 OS=Gossypium arboreum OX=29729 GN=F383_11670 PE=4 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 1.324e-111 Identity = 208/307 (67.75%), Postives = 224/307 (72.96%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLSSKRTA 362
+ H+QEQEMEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTEKYPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQD DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D+S+ SSKR A
Sbjct: 1 MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEKYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDVDADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDSSTHSSKRAA 255
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A1U8NUT2_GOSHI (RWD domain-containing protein 1-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107951935 PE=4 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 8.015e-111 Identity = 207/307 (67.43%), Postives = 224/307 (72.96%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLSSKRTA 362
+ H+QEQEMEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTE+YPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQD DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D+S+ SSKR A
Sbjct: 1 MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEEYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDVDADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDSSTHSSKRAA 255
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A1U8NQD4_GOSHI (RWD domain-containing protein 1-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107950674 PE=4 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 8.384e-109 Identity = 205/302 (67.88%), Postives = 220/302 (72.85%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLS 357
+ H+QEQEMEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTEKYPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQDA DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D S+ S
Sbjct: 1 MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEKYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDADADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDLSTHS 250
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A0D2MJX3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G060200 PE=4 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 3.105e-108 Identity = 204/302 (67.55%), Postives = 220/302 (72.85%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLS 357
+ H+QEQEMEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTEKYPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAK+WLSERYGQDA DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D S+ S
Sbjct: 1 MTDHLQEQEMEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEKYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKDWLSERYGQDADADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDLSTHS 250
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A061GD17_THECC (Ubiquitin-conjugating enzyme family protein OS=Theobroma cacao OX=3641 GN=TCM_028994 PE=4 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 7.421e-108 Identity = 206/294 (70.07%), Postives = 218/294 (74.15%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST-PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEK 350
+ +VQEQEMEIE L AILM E KEIHSGESGLSTSNRCFQI + D+DTDQST PVQLALIFSHTEKYPDEPPLLNVKS IRGIQ SDLKV+K KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQDA DNAEEEEA KDEVIVPHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+ KGA PV EG DEEDEEDID D++DFEDDEEDML+HYLAE
Sbjct: 1 MTDYVQEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQITLSPQ--------------DDDTDQSTTPVQLALIFSHTEKYPDEPPLLNVKS--------IRGIQISDLKVVKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDADADNAEEEEATKDEVIVPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLTGRQWFESGRATVKGAAPVNEGSDEEDEEDIDFDDDDFEDDEEDMLEHYLAEN 242
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A1U8NUF7_GOSHI (RWD domain-containing protein 1-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107951935 PE=4 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 1.315e-106 Identity = 202/298 (67.79%), Postives = 217/298 (72.82%), Query Frame = 0
Query: 67 MEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLSSKRTA 362
MEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTE+YPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQD DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D+S+ SSKR A
Sbjct: 1 MEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEEYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDVDADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDSSTHSSKRAA 246
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A1U8NPZ0_GOSHI (RWD domain-containing protein 1-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107950674 PE=4 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 2.079e-104 Identity = 200/293 (68.26%), Postives = 213/293 (72.70%), Query Frame = 0
Query: 67 MEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLS 357
MEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTEKYPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAKEWLSERYGQDA DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D S+ S
Sbjct: 1 MEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEKYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYGQDADADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDLSTHS 241
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A0D2RHF6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G060200 PE=4 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 6.902e-104 Identity = 199/293 (67.92%), Postives = 213/293 (72.70%), Query Frame = 0
Query: 67 MEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASAKGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLS 357
MEIE L AILM E KEIHSGESGL+TSNRCFQI + D+DTDQST PV LALIFSHTEKYPDEPPLLNVKS IRGIQ SDLKVLK KLEQE ASENLGMAMIYTLV+SAK+WLSERYGQDA DN EEEE+ KDEVI+PHGEPVTVDTF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+AKGA V E DEEDEEDID D++DFEDDEEDML+HYLAEK D S+ S
Sbjct: 1 MEIEALEAILMDEFKEIHSGESGLNTSNRCFQITLSPQ--------------DDDTDQSTTLPVLLALIFSHTEKYPDEPPLLNVKS--------IRGIQVSDLKVLKEKLEQE------------------------------ASENLGMAMIYTLVTSAKDWLSERYGQDADADNVEEEESTKDEVIIPHGEPVTVDTFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRATAKGAARVNEESDEEDEEDIDFDDDDFEDDEEDMLEHYLAEKSDLSTHS 241
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Match: A0A2H5NEK4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_037980 PE=4 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 9.315e-104 Identity = 195/308 (63.31%), Postives = 220/308 (71.43%), Query Frame = 0
Query: 58 VVHHVQEQEMEIEPLGAILMYELKEIHSGESGLSTSNRCFQIRFNSSGALSHRHFFLFSFFDEDTDQST--PVQLALIFSHTEKYPDEPPLLNVKSLVCPFSAIIRGIQSSDLKVLKLKLEQEIICLLSIFFLWQYSLIGPCCADSHFISCLHASENLGMAMIYTLVSSAKEWLSERYGQDACPDNAEEEEAAKDEVIVPHGEPVTVDTFSAWRERFEAELALERAKLIPESALTAPKEKKLIGRQWFENGRASA---KGATPVREGYDEEDEEDIDLDNNDFEDDEEDMLDHYLAEKPDTSSLSSKR 360
+ HVQEQEMEIE L AILM E KEIHSGESGL+TSN+CFQ+ + D++ D+ST PV+LALIFSHTEKYPDEPPLLNVKSL RGIQ+ DLK+LK KLEQE ASENLGMAMIYTLV+SAKEWLSERY QDA DN EEE KDEVIVPHGEPVTV+TF AWRERFEAELALERAKL+PESALTAPKEKKL GRQWFE+GRA+A KGA V E D+ED+EDID D++DFEDDE DML+HYLAEK D+S+ SS++
Sbjct: 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQ--------------DDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL--------RGIQAGDLKILKEKLEQE------------------------------ASENLGMAMIYTLVTSAKEWLSERYSQDAGIDNTGEEELEKDEVIVPHGEPVTVETFLAWRERFEAELALERAKLMPESALTAPKEKKLTGRQWFESGRATAVSQKGAVTVNEVSDDEDDEDIDFDDDDFEDDEVDMLEHYLAEKSDSSTHSSRQ 256 The following BLAST results are available for this feature:
BLAST of EVM_prediction_Ga05G1420 vs. NCBI nr
Analysis Date: 2019-03-07 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs NCBI nr) Total hits: 10
BLAST of EVM_prediction_Ga05G1420 vs. TAIR10
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs arabidopsis TAIR10) Total hits: 1
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt Swissprot) Total hits: 3
BLAST of EVM_prediction_Ga05G1420 vs. ExPASy TrEMBL
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for CRI v1.0 Gossypium arboreum proteins
Date Performed: 2019-03-06
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.Ga05G1420_CRI-A2_v1.0.a1 ID=evm.model.Ga05G1420_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga05G1420; organism=Gossypium arboreum; type=mRNA; length=1089bpback to top protein sequence of evm.model.Ga05G1420_CRI-A2_v1.0.a1 >evm.model.Ga05G1420_CRI-A2_v1.0.a1 ID=evm.model.Ga05G1420_CRI-A2_v1.0.a1; Name=evm.model.Ga05G1420_CRI-A2_v1.0.a1; organism=Gossypium arboreum; type=polypeptide; length=362bpback to top mRNA from alignment at Chr05_CRI-A2_v1.0.a1:12541184..12547603+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>evm.model.Ga05G1420_CRI-A2_v1.0.a1 ID=evm.model.Ga05G1420_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga05G1420; organism=Gossypium arboreum; type=mRNA; length=6420bp; location=Sequence derived from: Chr05_CRI-A2_v1.0.a1:12541184..12547603+ (Gossypium arboreumback to top Coding sequence (CDS) from alignment at Chr05_CRI-A2_v1.0.a1:12541184..12547603+ >evm.model.Ga05G1420_CRI-A2_v1.0.a1 ID=evm.model.Ga05G1420_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga05G1420; organism=Gossypium arboreum; type=CDS; length=1089bp; location=Sequence derived from: Chr05_CRI-A2_v1.0.a1:12541184..12547603+ (Gossypium arboreumback to top |