Cotton_D_gene_10006757, Cotton_D_gene_10006757 (mRNA) Gossypium raimondii
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Cotton_D_gene_10006757 vs. Malus x Domestica v1.0
Match: MDP0000155190 (MDP0000155190) HSP 1 Score: 224.942 bits (572), Expect = 4.117e-59 Identity = 100/187 (53.48%), Postives = 137/187 (73.26%), Query Frame = 1
Query: 13 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRFHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQ 199
+PWL VGLGNPG KY TRHNVGFEM+DA A+A+GI +++++ KA+ G+G +GD P++ AKPQTYMN SGES G++ +YYK+PL + DD+DLP G LR+ KGGHG HNG++SVI HF+G+R+F RLRIGIG+PPG+MDP F+L+ F ++ ++ QEGVE +SA N+ +
Sbjct: 63 QPWLIVGLGNPGKKYNSTRHNVGFEMVDAIAEAEGIPLSSVSFKALVGKGLIGDVPVIFAKPQTYMNKSGESVGSIVSYYKIPLKQIFDDLDLPFGKLRMLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDPINFVLRPFTKQEQQELNFTFQEGVEAVRILLLEGFNKSATFVNSAK 249
BLAST of Cotton_D_gene_10006757 vs. Malus x Domestica v1.0
Match: MDP0000188529 (MDP0000188529) HSP 1 Score: 224.172 bits (570), Expect = 6.460e-59 Identity = 99/187 (52.94%), Postives = 136/187 (72.73%), Query Frame = 1
Query: 13 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRFHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQ 199
+PWL VGLGNPG KY TRHNVGFEM+DA A+A+GI +++++ KA+ G+G +GD P++ AKPQTYMN SGES G++ +YYK+PL + DD+DLP G LR+ KGGHG HNG++S+I HF+G+R+F RLRIGIG+PPG+MDP F+L+ F + ++ Q+GVE +SA NT +
Sbjct: 69 QPWLIVGLGNPGKKYNSTRHNVGFEMVDAIAEAEGIPLSSVSFKALVGKGLIGDVPVIFAKPQTYMNKSGESVGSIVSYYKIPLKQIFDDLDLPFGKLRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDPVNFVLRPFTXQEQHELNFTFQDGVEAVRILLLEGFNKSATFVNTAK 255
BLAST of Cotton_D_gene_10006757 vs. Malus x Domestica v1.0
Match: MDP0000435964 (MDP0000435964) HSP 1 Score: 147.902 bits (372), Expect = 5.148e-36 Identity = 83/193 (43.01%), Postives = 102/193 (52.85%), Query Frame = 1
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRFHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKHIRL 206
PWL VGLGNPG+KY GTRHN+GFEMID AKA+GI MNT+ KA+ G G G S +D+M LP GVLR+Q KGGHG HNG + + GIG PPG MD KA+LLQ+F+ R +ID AL +GVE +S FN QKYK+ ++
Sbjct: 52 PWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSS--------------VYDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 198
BLAST of Cotton_D_gene_10006757 vs. Malus x Domestica v1.0
Match: MDP0000321752 (MDP0000321752) HSP 1 Score: 115.161 bits (287), Expect = 4.443e-26 Identity = 57/107 (53.27%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 100 HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKHIRL 206
+D+M LP GVLR+Q KGGHG HNG+KSV+ H G REF RL IGIG PPG MD KA+LLQ+F+ R +ID AL +GVE +S FN QKYK+ ++
Sbjct: 2 YDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 108
BLAST of Cotton_D_gene_10006757 vs. Malus x Domestica v1.0
Match: MDP0000122308 (MDP0000122308) HSP 1 Score: 91.6633 bits (226), Expect = 4.760e-19 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 2 ITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGF 63
++RRCFC++APRPWLFVGLGNPGDKYKGTRHN F+MID FA + + T+ KAI GQG
Sbjct: 103 LSRRCFCTAAPRPWLFVGLGNPGDKYKGTRHNARFQMIDPFAGS----LYTVQRKAILGQGM 160
BLAST of Cotton_D_gene_10006757 vs. Malus x Domestica v1.0
Match: MDP0000149162 (MDP0000149162) HSP 1 Score: 90.1225 bits (222), Expect = 1.596e-18 Identity = 41/61 (67.21%), Postives = 49/61 (80.33%), Query Frame = 1
Query: 2 ITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQG 62
++RRCFC++APRPWLFVGLGNPGDKYKGTRHN F+MID FA + + T+ KAI GQG
Sbjct: 5 LSRRCFCTAAPRPWLFVGLGNPGDKYKGTRHNARFQMIDPFAGS----LYTVQRKAILGQG 61
BLAST of Cotton_D_gene_10006757 vs. Malus x Domestica v1.0
Match: MDP0000558202 (MDP0000558202) HSP 1 Score: 76.6406 bits (187), Expect = 1.872e-14 Identity = 37/55 (67.27%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 151 MDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKHIR 205
MDPKAFLLQKFNA+A+ RID ALQEGV ESARRFN+EQKYKH+R
Sbjct: 1 MDPKAFLLQKFNATAQGRIDAALQEGVNILKVVLSKGFAESARRFNSEQKYKHLR 55
BLAST of Cotton_D_gene_10006757 vs. Malus x Domestica v1.0
Match: MDP0000177096 (MDP0000177096) HSP 1 Score: 54.6842 bits (130), Expect = 6.611e-8 Identity = 31/66 (46.97%), Postives = 35/66 (53.03%), Query Frame = 1
Query: 19 GLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGES 84
GLGNPGDKY+GTR +I GFVG+ P+ LAKPQTYMNL GES
Sbjct: 388 GLGNPGDKYEGTRQAQWKFVI---------------------SGFVGEVPVFLAKPQTYMNLRGES 432
BLAST of Cotton_D_gene_10006757 vs. Vitis vinifera
Match: GSVIVT01025453001 (assembled CDS) HSP 1 Score: 347.051 bits (889), Expect = 3.326e-96 Identity = 166/213 (77.93%), Postives = 183/213 (85.92%), Query Frame = 1
Query: 2 ITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKHIRLQTVPT 211
+RR FC+++PRPWLFVGLGNPGDKYKGTRHNVGFEMI+AFA++QGI M+T++CKAIFGQGFV P+ LAKPQTYMNLSGES+G LAAYYKLPLNR FHDDM LPCGVLRL KGGHG+HNGLKSVIYHFRGNREF RLRIGIGKPPGQMDPKAFLLQKF+A+ARERID ALQEGV TESAR FNTEQKYKHIR+Q + T
Sbjct: 5 FSRRLFCTASPRPWLFVGLGNPGDKYKGTRHNVGFEMINAFAESQGIPMDTVHCKAIFGQGFVDAVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVVVFHDDMSLPCGVLRLHHKGGHGNHNGLKSVIYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFSATARERIDAALQEGVGVLKLLSSKGLTESARCFNTEQKYKHIRVQNMQT 217
BLAST of Cotton_D_gene_10006757 vs. Vitis vinifera
Match: GSVIVT01008257001 (assembled CDS) HSP 1 Score: 227.254 bits (578), Expect = 3.715e-60 Identity = 107/200 (53.50%), Postives = 143/200 (71.50%), Query Frame = 1
Query: 10 SAPRP---WLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKH 203
S+PRP WL VGLGNPG KY GTRHNVGFEM+DA A+A+GI +++++ K++FG+GF+G+ P++LAKPQT+MN+SGES GA+ +YYK+PL + DD+DLP LRL KGGHG HNG++SVI HF+G+R+F RLRIGIG+PPG+MD F+L F+ RE +D Q GVE +SA NT + +
Sbjct: 105 SSPRPVKPWLLVGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLAKPQTFMNVSGESVGAIVSYYKIPLKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNKSASFVNTAKSLEQ 304
BLAST of Cotton_D_gene_10006757 vs. Vitis vinifera
Match: GSVIVT01031009001 (assembled CDS) HSP 1 Score: 225.328 bits (573), Expect = 1.343e-59 Identity = 110/193 (56.99%), Postives = 136/193 (70.47%), Query Frame = 1
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKH 203
PWL VGLGNPG+KY GTRHNVGFEMID ++ +GI +NT+ KA+ G G +G+ P+LLAKPQ YMN SGES G LAAYY++PL +D+M+LP GVLRL +GGHG HNGLK+V+ H G REF RL IGIG PPG MD KA+LLQKF+ R++ID A ++G+ S RFN QKYK+
Sbjct: 51 PWLIVGLGNPGNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAYYQVPLRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKY 243
BLAST of Cotton_D_gene_10006757 vs. Vitis vinifera
Match: GSVIVT01013556001 (assembled CDS) HSP 1 Score: 112.849 bits (281), Expect = 9.394e-26 Identity = 56/77 (72.73%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 50 MNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNG 123
M+ ++ KAIFGQGFVGD + LA P TYMNLSGES G LAAYYKLPLNR FHDD LPCGVL L KGGHGSHNG
Sbjct: 1 MDIVHHKAIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLPLNRMVVFHDDKSLPCGVLCLHHKGGHGSHNG 77
BLAST of Cotton_D_gene_10006757 vs. TAIR10
Match: AT5G19830.1 (| Peptidyl-tRNA hydrolase family protein | Chr5:6703383-6705125 FORWARD LENGTH=219 | 201606) HSP 1 Score: 334.724 bits (857), Expect = 7.203e-118 Identity = 160/212 (75.47%), Postives = 180/212 (84.91%), Query Frame = 0
Query: 2 ITRRCFC-SSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTV 209
++RRC+C SS RPWLF+GLGNPGDKYKGTRHN+GFEMID FA++ GI+MN +N KAI GQGFV D P++LAKPQTYMNLSGESSG LAAYYKLPLNR HDDM LPCGVLRLQ+KGGHG HNGLKSV+ HFRGNREFARLRIGIGKPPGQMDPKAFLLQKF+ ARER+D AL EGV+ LKL+L K ES R FN EQKYKH++ T+
Sbjct: 5 LSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKHLKQHTI 216
BLAST of Cotton_D_gene_10006757 vs. TAIR10
Match: AT5G16140.2 (| Peptidyl-tRNA hydrolase family protein | Chr5:5270308-5271517 REVERSE LENGTH=240 | 201606) HSP 1 Score: 239.195 bits (609), Expect = 7.037e-80 Identity = 115/192 (59.90%), Postives = 142/192 (73.96%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYK 202
PWL VGLGNPG+KY GTRHNVGFEMID A+ +G+ MNT+ KA+ G G + D P+LLAKPQTYMN SGES G+LA++Y++PL +D+M LP GVLRLQ KGG G HNG+KSV+ H G R F RL IGIGKPPG MD KAFLLQKF+ +++I+ AL++G E +K L+L G + RFN QKYK
Sbjct: 45 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYK 236
BLAST of Cotton_D_gene_10006757 vs. TAIR10
Match: AT5G16140.1 (| Peptidyl-tRNA hydrolase family protein | Chr5:5270308-5271517 REVERSE LENGTH=240 | 201606) HSP 1 Score: 239.195 bits (609), Expect = 7.037e-80 Identity = 115/192 (59.90%), Postives = 142/192 (73.96%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYK 202
PWL VGLGNPG+KY GTRHNVGFEMID A+ +G+ MNT+ KA+ G G + D P+LLAKPQTYMN SGES G+LA++Y++PL +D+M LP GVLRLQ KGG G HNG+KSV+ H G R F RL IGIGKPPG MD KAFLLQKF+ +++I+ AL++G E +K L+L G + RFN QKYK
Sbjct: 45 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYK 236
BLAST of Cotton_D_gene_10006757 vs. TAIR10
Match: AT1G18440.1 (| Peptidyl-tRNA hydrolase family protein | Chr1:6345994-6347686 FORWARD LENGTH=288 | 201606) HSP 1 Score: 240.35 bits (612), Expect = 9.504e-80 Identity = 108/194 (55.67%), Postives = 148/194 (76.29%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHI 204
PWL VGLGNPG KY+GTRHNVGFEM+DA A A+GI MNT+N KA+FG+G +G+ P++LAKPQT+MNLSGES G + ++YK+PL + +DD+DLP G LRL KGGHG HNG++S+I +G+R+F RLRIGIG+PPG+MD F+L++FN +E +D Q G+E +++LLL+G +SA NT + + +
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287
BLAST of Cotton_D_gene_10006757 vs. TAIR10
Match: AT5G38290.2 (| Peptidyl-tRNA hydrolase family protein | Chr5:15303491-15305381 FORWARD LENGTH=250 | 201606) HSP 1 Score: 235.728 bits (600), Expect = 2.111e-78 Identity = 116/192 (60.42%), Postives = 138/192 (71.88%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYK 202
PWL VGLGNPG KY GTRHN+GFEMID A+A I MNT+ KA+ G G VG+ P+LL KPQ YMN SGES G LAAYY++PL +DDM L GVLRLQ KGGH HNGLK+V H G R + RL IGIG PPG MD KAFLLQKF+ R+++D L++GVEG+K L+ +G ++S RFN QKYK
Sbjct: 55 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 246
BLAST of Cotton_D_gene_10006757 vs. TAIR10
Match: AT5G38290.1 (| Peptidyl-tRNA hydrolase family protein | Chr5:15303603-15305381 FORWARD LENGTH=246 | 201606) HSP 1 Score: 235.343 bits (599), Expect = 2.259e-78 Identity = 116/192 (60.42%), Postives = 138/192 (71.88%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYK 202
PWL VGLGNPG KY GTRHN+GFEMID A+A I MNT+ KA+ G G VG+ P+LL KPQ YMN SGES G LAAYY++PL +DDM L GVLRLQ KGGH HNGLK+V H G R + RL IGIG PPG MD KAFLLQKF+ R+++D L++GVEG+K L+ +G ++S RFN QKYK
Sbjct: 51 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 242
BLAST of Cotton_D_gene_10006757 vs. TAIR10
Match: AT1G18440.2 (| Peptidyl-tRNA hydrolase family protein | Chr1:6345994-6347154 FORWARD LENGTH=223 | 201606) HSP 1 Score: 149.058 bits (375), Expect = 1.064e-44 Identity = 67/105 (63.81%), Postives = 85/105 (80.95%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDK 115
PWL VGLGNPG KY+GTRHNVGFEM+DA A A+GI MNT+N KA+FG+G +G+ P++LAKPQT+MNLSGES G + ++YK+PL + +DD+DLP G LRL K
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPK 198
BLAST of Cotton_D_gene_10006757 vs. Prunus Persica v1.0
Match: ppa011211m () HSP 1 Score: 337.421 bits (864), Expect = 2.789e-93 Identity = 160/212 (75.47%), Postives = 182/212 (85.85%), Query Frame = 1
Query: 2 ITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHN-VGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKHIRLQTV 209
+ RR FC++AP+PWLFVGLGNPG+KYKGTRHN VGFEMID FA +QGIEM+T++CKAIFGQGFVG+ P+ LAKPQTYMNLSGES+G LAAYYKLPLNR FHDDM+LPCGVLRL GGHG HNG+KSV+YHFRGNREF RLRIGIG+PPGQMDPKAFLLQKFNA+A+ RID ALQEGV+ ESARRFN+EQKYKH+RL+T
Sbjct: 5 LGRRYFCTAAPQPWLFVGLGNPGNKYKGTRHNQVGFEMIDVFANSQGIEMSTVHCKAIFGQGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLHPNGGHGCHNGVKSVMYHFRGNREFPRLRIGIGRPPGQMDPKAFLLQKFNATAQGRIDAALQEGVDILKVLLSEGLAESARRFNSEQKYKHMRLETT 216
BLAST of Cotton_D_gene_10006757 vs. Prunus Persica v1.0
Match: ppa010513m () HSP 1 Score: 236.498 bits (602), Expect = 6.985e-63 Identity = 114/196 (58.16%), Postives = 139/196 (70.92%), Query Frame = 1
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKHIRL 206
PWL VGLGNPG+KY GTRHN+GFEMID+ AK QG+ MNT+ KA+ G G +G+ P+LLAKPQ YMN SGES G LAAYY++PL +D+M LP GVLR+Q KGGHG HNG+KSV+ H G REF RL IGIG PPG MD KA+LLQ+F+ R +ID AL +GVE +S FN QKYK+ ++
Sbjct: 52 PWLIVGLGNPGNKYHGTRHNIGFEMIDSIAKTQGVVMNTIQSKALVGIGSIGEVPILLAKPQAYMNYSGESVGPLAAYYQVPLRHILLVYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 247
BLAST of Cotton_D_gene_10006757 vs. Prunus Persica v1.0
Match: ppa010131m () HSP 1 Score: 217.238 bits (552), Expect = 4.649e-57 Identity = 99/190 (52.11%), Postives = 135/190 (71.05%), Query Frame = 1
Query: 13 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQ 199
+PWL VGLGNPG KY TRHNVGFEM+DA A+A+GI +++++ KA+ G+G +GD P++ AKPQT+MN SGES G++ +YYK+PL + DD+DLP LRL KGGHG HNG++SVI HF+G+R+F RLRIGIG+PPG+MDP F+L+ F E ++ Q+GVE +SA N+ +
Sbjct: 67 QPWLIVGLGNPGKKYHSTRHNVGFEMVDAIAEAEGISLSSVSFKALVGKGLIGDVPVIFAKPQTFMNKSGESVGSIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDPVNFVLRPFTKQELEELNFTFQDGVEAVRILLLEGFNKSATFVNSAK 256
BLAST of Cotton_D_gene_10006757 vs. Populus trichicarpa v2.0
Match: POPTR_0001s04230.1 () HSP 1 Score: 332.028 bits (850), Expect = 1.544e-91 Identity = 162/218 (74.31%), Postives = 181/218 (83.03%), Query Frame = 1
Query: 2 ITRRCFCSSA-----PRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKHIRLQTVPT 211
++RRCFC++A P PWLFVGLGNPG+K+KGTRHNVGFEMIDAFA + GI MN CKA+FG+GFVGDAP+LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDM+LPCGVLRLQ+KGGHG H GLKSVI HFRGNREFARLRIGIG+PPGQMDPKAFLLQKFNA+ARERID AL EGV T +AR FN EQKYK+IR +T+ T
Sbjct: 5 VSRRCFCTAAAAPTTPSPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAGSLGISMNIPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDAALPEGVVALRCILFEGLTRTARWFNQEQKYKYIRSETMST 222
BLAST of Cotton_D_gene_10006757 vs. Populus trichicarpa v2.0
Match: POPTR_0001s04230.2 () HSP 1 Score: 301.212 bits (770), Expect = 2.822e-82 Identity = 151/218 (69.27%), Postives = 169/218 (77.52%), Query Frame = 1
Query: 2 ITRRCFCSSA-----PRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKHIRLQTVPT 211
++RRCFC++A P PWLFVGLGNPG+K+KGTRHN I MN CKA+FG+GFVGDAP+LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDM+LPCGVLRLQ+KGGHG H GLKSVI HFRGNREFARLRIGIG+PPGQMDPKAFLLQKFNA+ARERID AL EGV T +AR FN EQKYK+IR +T+ T
Sbjct: 5 VSRRCFCTAAAAPTTPSPWLFVGLGNPGEKFKGTRHNAW------------ISMNIPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDAALPEGVVALRCILFEGLTRTARWFNQEQKYKYIRSETMST 210
BLAST of Cotton_D_gene_10006757 vs. Populus trichicarpa v2.0
Match: POPTR_0001s04230.3 () HSP 1 Score: 294.664 bits (753), Expect = 2.824e-80 Identity = 141/175 (80.57%), Postives = 156/175 (89.14%), Query Frame = 1
Query: 2 ITRRCFCSSA-----PRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARER 168
++RRCFC++A P PWLFVGLGNPG+K+KGTRHNVGFEMIDAFA + GI MN CKA+FG+GFVGDAP+LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDM+LPCGVLRLQ+KGGHG H GLKSVI HFRGNREFARLRIGIG+PPGQMDPKAFLLQKFNA+ARER
Sbjct: 5 VSRRCFCTAAAAPTTPSPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAGSLGISMNIPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARER 179
BLAST of Cotton_D_gene_10006757 vs. Populus trichicarpa v2.0
Match: POPTR_0004s09730.1 () HSP 1 Score: 239.58 bits (610), Expect = 1.069e-63 Identity = 116/193 (60.10%), Postives = 140/193 (72.54%), Query Frame = 1
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKH 203
PWL VGLGNPG KY GTRHNVGFEMID A+A+G+ MNT+ KA+ G G +G+ P+LLAKPQ YMN SGES G LAA+YK+PL +D+M+LP G+LR+Q KGGHG HNG+KSV+ H G REF RL IGIG PPG MD KAFLLQKF+ + RE+ID +L++GVE T RFN QKYK+
Sbjct: 49 PWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKY 241
BLAST of Cotton_D_gene_10006757 vs. Populus trichicarpa v2.0
Match: POPTR_0012s05820.1 () HSP 1 Score: 221.476 bits (563), Expect = 3.248e-58 Identity = 101/195 (51.79%), Postives = 136/195 (69.74%), Query Frame = 1
Query: 13 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEXXXXXXXXXXTESARRFNTEQKYKHI 204
PWL VGLGNPG KY TRHNVGF+M+DA A A+GI ++ ++ KA+FG+GF+G+ P++ AKPQT+MN SGES GA+ +YYK+PL + +DD+DLP LRL KGGHG HNG+KSVI HF+GNR+F RLRIGIG+PPG+MD F+L+ F E +D Q+G+E +SA N+ + + +
Sbjct: 76 HPWLIVGLGNPGKKYHSTRHNVGFQMVDALADAEGISISGVSFKALFGKGFIGNVPVMFAKPQTFMNASGESVGAIVSYYKIPLKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNRDFPRLRIGIGRPPGKMDTANFVLRPFTKQEHEELDFMFQQGIEAVRILLLEGLNKSATFVNSTKSMEQL 270
BLAST of Cotton_D_gene_10006757 vs. Populus trichicarpa v2.0
Match: POPTR_1290s00200.1 () HSP 1 Score: 159.458 bits (402), Expect = 1.529e-39 Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 1
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNG 123
PWL VGLGNPG KY GTRHNVGFEMID A+A+G+ MNT+ KA+ G G +G+ P+LLAKPQ YMN SGES G LAA+YK+PL +D+M+LP G+LR+Q KGGHG HNG
Sbjct: 49 PWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNG 161
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A0D2T330_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G057900 PE=3 SV=1) HSP 1 Score: 433.721 bits (1114), Expect = 8.060e-154 Identity = 211/214 (98.60%), Postives = 211/214 (98.60%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRVIVFHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 214
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A0D2RHK4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G057900 PE=3 SV=1) HSP 1 Score: 427.557 bits (1098), Expect = 2.934e-151 Identity = 211/219 (96.35%), Postives = 211/219 (96.35%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNG-----LKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR FHDDMDLPCGVLRLQDKGGHGSHNG LKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRVIVFHDDMDLPCGVLRLQDKGGHGSHNGYEWRMLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 219
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A1U8K699_GOSHI (peptidyl-tRNA hydrolase, mitochondrial-like OS=Gossypium hirsutum OX=3635 GN=LOC107913856 PE=3 SV=1) HSP 1 Score: 426.402 bits (1095), Expect = 5.281e-151 Identity = 207/214 (96.73%), Postives = 209/214 (97.66%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGES+GALAAYYKLPLNR FHDDMDLPCGVL LQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEG KLLLLKGLTESARRFNTEQKYKHIRLQT+PT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESTGALAAYYKLPLNRVIVFHDDMDLPCGVLHLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGSKLLLLKGLTESARRFNTEQKYKHIRLQTMPT 214
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A1U8IPR8_GOSHI (peptidyl-tRNA hydrolase, mitochondrial-like OS=Gossypium hirsutum OX=3635 GN=LOC107897441 PE=3 SV=1) HSP 1 Score: 425.631 bits (1093), Expect = 1.229e-150 Identity = 206/214 (96.26%), Postives = 208/214 (97.20%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLF GLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMN SGES+GALAAYYKLPLNR FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTE ARRFNTEQKYKHIRLQT+PT
Sbjct: 1 MITRRCFCSSAPRPWLFAGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNFSGESTGALAAYYKLPLNRVIVFHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTEGARRFNTEQKYKHIRLQTMPT 214
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A0B0P7N7_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_25457 PE=3 SV=1) HSP 1 Score: 423.32 bits (1087), Expect = 9.155e-150 Identity = 205/214 (95.79%), Postives = 208/214 (97.20%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLL+KPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQDKGG GSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTE ARRFNTEQKYKHIRLQT+PT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLSKPQTYMNLSGESTGPLAAYYKLPLNRVIVFHDDMDLPCGVLRLQDKGGQGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTEGARRFNTEQKYKHIRLQTMPT 214
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A0D2UPK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G057900 PE=4 SV=1) HSP 1 Score: 401.364 bits (1030), Expect = 3.075e-141 Identity = 197/211 (93.36%), Postives = 197/211 (93.36%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRFHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGES FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGES--------------FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 197
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A061EW72_THECC (Peptidyl-tRNA hydrolase family protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_024176 PE=3 SV=1) HSP 1 Score: 400.593 bits (1028), Expect = 1.228e-140 Identity = 191/214 (89.25%), Postives = 202/214 (94.39%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCS APRPWLF+GLGNPGDKYKGTRHNVGFEMID FA+ QGIEMNTL+CKAIFGQGFVGD+ +LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQ+KGGHGSHNGLKSVIYHFRGNREFA+LRIGIG+PPGQMDPKAFLLQKFNASARERIDTALQEGV+ LKLLL KG TESARRFN EQKYKHIRLQT+PT
Sbjct: 11 MITRRCFCSGAPRPWLFLGLGNPGDKYKGTRHNVGFEMIDKFAETQGIEMNTLHCKAIFGQGFVGDSAVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVIVFHDDMDLPCGVLRLQNKGGHGSHNGLKSVIYHFRGNREFAQLRIGIGRPPGQMDPKAFLLQKFNASARERIDTALQEGVDALKLLLSKGFTESARRFNAEQKYKHIRLQTMPT 224
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A061F2Z4_THECC (Peptidyl-tRNA hydrolase family protein isoform 3 OS=Theobroma cacao OX=3641 GN=TCM_024176 PE=3 SV=1) HSP 1 Score: 400.208 bits (1027), Expect = 1.246e-140 Identity = 191/214 (89.25%), Postives = 202/214 (94.39%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCS APRPWLF+GLGNPGDKYKGTRHNVGFEMID FA+ QGIEMNTL+CKAIFGQGFVGD+ +LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQ+KGGHGSHNGLKSVIYHFRGNREFA+LRIGIG+PPGQMDPKAFLLQKFNASARERIDTALQEGV+ LKLLL KG TESARRFN EQKYKHIRLQT+PT
Sbjct: 1 MITRRCFCSGAPRPWLFLGLGNPGDKYKGTRHNVGFEMIDKFAETQGIEMNTLHCKAIFGQGFVGDSAVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVIVFHDDMDLPCGVLRLQNKGGHGSHNGLKSVIYHFRGNREFAQLRIGIGRPPGQMDPKAFLLQKFNASARERIDTALQEGVDALKLLLSKGFTESARRFNAEQKYKHIRLQTMPT 214
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A061EWU7_THECC (Peptidyl-tRNA hydrolase family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_024176 PE=3 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 1.042e-139 Identity = 191/214 (89.25%), Postives = 202/214 (94.39%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCS APRPWLF+GLGNPGDKYKGTRHNVGFEMID FA+ QGIEMNTL+CKAIFGQGFVGD+ +LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQ+KGGHGSHNGLKSVIYHFRGNREFA+LRIGIG+PPGQMDPKAFLLQKFNASARERIDTALQEGV+ LKLLL KG TESARRFN EQKYKHIRLQT+PT
Sbjct: 50 MITRRCFCSGAPRPWLFLGLGNPGDKYKGTRHNVGFEMIDKFAETQGIEMNTLHCKAIFGQGFVGDSAVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVIVFHDDMDLPCGVLRLQNKGGHGSHNGLKSVIYHFRGNREFAQLRIGIGRPPGQMDPKAFLLQKFNASARERIDTALQEGVDALKLLLSKGFTESARRFNAEQKYKHIRLQTMPT 263
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Match: A0A059CQE8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C01519 PE=3 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 1.680e-133 Identity = 181/214 (84.58%), Postives = 196/214 (91.59%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
+I RRCFC+ APRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFA++QGI M+T++CKA+FGQGFVGD P+ LAKPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQ KGGHGSHNGLKSVIYHFRGNREFARLRIGIG+PPGQMDPKAFLLQKFN +ARERID ALQEG + LKL+L KGLTES R FN EQKYKHIRLQT+PT
Sbjct: 4 VIARRCFCTGAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIPMSTVHCKAMFGQGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMDLPCGVLRLQPKGGHGSHNGLKSVIYHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNQTARERIDVALQEGADALKLVLSKGLTESTRCFNMEQKYKHIRLQTLPT 217
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|823248531|ref|XP_012456934.1| (PREDICTED: peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Gossypium raimondii] >gi|823248533|ref|XP_012456935.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Gossypium raimondii] >gi|823248535|ref|XP_012456936.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Gossypium raimondii] >gi|763803154|gb|KJB70092.1| hypothetical protein B456_011G057900 [Gossypium raimondii] >gi|763803155|gb|KJB70093.1| hypothetical protein B456_011G057900 [Gossypium raimondii] >gi|763803156|gb|KJB70094.1| hypothetical protein B456_011G057900 [Gossypium raimondii]) HSP 1 Score: 433.721 bits (1114), Expect = 9.595e-154 Identity = 211/214 (98.60%), Postives = 211/214 (98.60%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRVIVFHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 214
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|763803159|gb|KJB70097.1| (hypothetical protein B456_011G057900 [Gossypium raimondii]) HSP 1 Score: 427.557 bits (1098), Expect = 3.493e-151 Identity = 211/219 (96.35%), Postives = 211/219 (96.35%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNG-----LKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR FHDDMDLPCGVLRLQDKGGHGSHNG LKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRVIVFHDDMDLPCGVLRLQDKGGHGSHNGYEWRMLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 219
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|1029075556|ref|XP_016698002.1| (PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Gossypium hirsutum] >gi|1029075558|ref|XP_016698003.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Gossypium hirsutum] >gi|1029075560|ref|XP_016698004.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Gossypium hirsutum]) HSP 1 Score: 426.402 bits (1095), Expect = 6.286e-151 Identity = 207/214 (96.73%), Postives = 209/214 (97.66%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGES+GALAAYYKLPLNR FHDDMDLPCGVL LQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEG KLLLLKGLTESARRFNTEQKYKHIRLQT+PT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESTGALAAYYKLPLNRVIVFHDDMDLPCGVLHLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGSKLLLLKGLTESARRFNTEQKYKHIRLQTMPT 214
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|1029029235|ref|XP_016678388.1| (PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Gossypium hirsutum] >gi|1029029237|ref|XP_016678389.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Gossypium hirsutum]) HSP 1 Score: 425.631 bits (1093), Expect = 1.463e-150 Identity = 206/214 (96.26%), Postives = 208/214 (97.20%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLF GLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMN SGES+GALAAYYKLPLNR FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTE ARRFNTEQKYKHIRLQT+PT
Sbjct: 1 MITRRCFCSSAPRPWLFAGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNFSGESTGALAAYYKLPLNRVIVFHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTEGARRFNTEQKYKHIRLQTMPT 214
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|1050647411|ref|XP_017647037.1| (PREDICTED: peptidyl-tRNA hydrolase, mitochondrial [Gossypium arboreum] >gi|1050647413|ref|XP_017647038.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial [Gossypium arboreum] >gi|728839913|gb|KHG19356.1| hypothetical protein F383_25457 [Gossypium arboreum]) HSP 1 Score: 423.32 bits (1087), Expect = 1.090e-149 Identity = 205/214 (95.79%), Postives = 208/214 (97.20%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLL+KPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQDKGG GSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTE ARRFNTEQKYKHIRLQT+PT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLSKPQTYMNLSGESTGPLAAYYKLPLNRVIVFHDDMDLPCGVLRLQDKGGQGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTEGARRFNTEQKYKHIRLQTMPT 214
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|763803157|gb|KJB70095.1| (hypothetical protein B456_011G057900 [Gossypium raimondii] >gi|763803158|gb|KJB70096.1| hypothetical protein B456_011G057900 [Gossypium raimondii]) HSP 1 Score: 401.364 bits (1030), Expect = 3.661e-141 Identity = 197/211 (93.36%), Postives = 197/211 (93.36%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRFHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGES FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT
Sbjct: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGES--------------FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 197
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|508717006|gb|EOY08903.1| (Peptidyl-tRNA hydrolase family protein isoform 2 [Theobroma cacao]) HSP 1 Score: 400.593 bits (1028), Expect = 1.461e-140 Identity = 191/214 (89.25%), Postives = 202/214 (94.39%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCS APRPWLF+GLGNPGDKYKGTRHNVGFEMID FA+ QGIEMNTL+CKAIFGQGFVGD+ +LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQ+KGGHGSHNGLKSVIYHFRGNREFA+LRIGIG+PPGQMDPKAFLLQKFNASARERIDTALQEGV+ LKLLL KG TESARRFN EQKYKHIRLQT+PT
Sbjct: 11 MITRRCFCSGAPRPWLFLGLGNPGDKYKGTRHNVGFEMIDKFAETQGIEMNTLHCKAIFGQGFVGDSAVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVIVFHDDMDLPCGVLRLQNKGGHGSHNGLKSVIYHFRGNREFAQLRIGIGRPPGQMDPKAFLLQKFNASARERIDTALQEGVDALKLLLSKGFTESARRFNAEQKYKHIRLQTMPT 224
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|508717007|gb|EOY08904.1| (Peptidyl-tRNA hydrolase family protein isoform 3 [Theobroma cacao]) HSP 1 Score: 400.208 bits (1027), Expect = 1.483e-140 Identity = 191/214 (89.25%), Postives = 202/214 (94.39%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCS APRPWLF+GLGNPGDKYKGTRHNVGFEMID FA+ QGIEMNTL+CKAIFGQGFVGD+ +LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQ+KGGHGSHNGLKSVIYHFRGNREFA+LRIGIG+PPGQMDPKAFLLQKFNASARERIDTALQEGV+ LKLLL KG TESARRFN EQKYKHIRLQT+PT
Sbjct: 1 MITRRCFCSGAPRPWLFLGLGNPGDKYKGTRHNVGFEMIDKFAETQGIEMNTLHCKAIFGQGFVGDSAVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVIVFHDDMDLPCGVLRLQNKGGHGSHNGLKSVIYHFRGNREFAQLRIGIGRPPGQMDPKAFLLQKFNASARERIDTALQEGVDALKLLLSKGFTESARRFNAEQKYKHIRLQTMPT 214
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|1204928629|ref|XP_021297474.1| (peptidyl-tRNA hydrolase, mitochondrial [Herrania umbratica] >gi|1204928631|ref|XP_021297475.1| peptidyl-tRNA hydrolase, mitochondrial [Herrania umbratica] >gi|1204928633|ref|XP_021297476.1| peptidyl-tRNA hydrolase, mitochondrial [Herrania umbratica] >gi|1204928635|ref|XP_021297477.1| peptidyl-tRNA hydrolase, mitochondrial [Herrania umbratica]) HSP 1 Score: 398.282 bits (1022), Expect = 1.011e-139 Identity = 191/214 (89.25%), Postives = 200/214 (93.46%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCS APRPWLF+GLGNPGDKYKGTRHNVGFEMID FA+ QGIE NTL+CKAIFGQGFVGD+ +LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQ+KGGHGSHNGLKSVIYHFRGNREFARLRIGIG PPGQMDPKAFLLQKFN SARERIDTALQEGV+ LKLLL KG TESARRFNTEQKYKHIRLQT+PT
Sbjct: 1 MITRRCFCSGAPRPWLFLGLGNPGDKYKGTRHNVGFEMIDKFAETQGIETNTLHCKAIFGQGFVGDSAVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVIVFHDDMDLPCGVLRLQNKGGHGSHNGLKSVIYHFRGNREFARLRIGIGGPPGQMDPKAFLLQKFNTSARERIDTALQEGVDALKLLLSKGFTESARRFNTEQKYKHIRLQTMPT 214
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Match: gi|508717005|gb|EOY08902.1| (Peptidyl-tRNA hydrolase family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 399.823 bits (1026), Expect = 1.240e-139 Identity = 191/214 (89.25%), Postives = 202/214 (94.39%), Query Frame = 0
Query: 1 MITRRCFCSSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTVPT 211
MITRRCFCS APRPWLF+GLGNPGDKYKGTRHNVGFEMID FA+ QGIEMNTL+CKAIFGQGFVGD+ +LLAKPQTYMNLSGES+G LAAYYKLPLNR FHDDMDLPCGVLRLQ+KGGHGSHNGLKSVIYHFRGNREFA+LRIGIG+PPGQMDPKAFLLQKFNASARERIDTALQEGV+ LKLLL KG TESARRFN EQKYKHIRLQT+PT
Sbjct: 50 MITRRCFCSGAPRPWLFLGLGNPGDKYKGTRHNVGFEMIDKFAETQGIEMNTLHCKAIFGQGFVGDSAVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVIVFHDDMDLPCGVLRLQNKGGHGSHNGLKSVIYHFRGNREFAQLRIGIGRPPGQMDPKAFLLQKFNASARERIDTALQEGVDALKLLLSKGFTESARRFNAEQKYKHIRLQTMPT 263
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19830 PE=2 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 6.933e-117 Identity = 160/212 (75.47%), Postives = 180/212 (84.91%), Query Frame = 0
Query: 2 ITRRCFC-SSAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRLQTV 209
++RRC+C SS RPWLF+GLGNPGDKYKGTRHN+GFEMID FA++ GI+MN +N KAI GQGFV D P++LAKPQTYMNLSGESSG LAAYYKLPLNR HDDM LPCGVLRLQ+KGGHG HNGLKSV+ HFRGNREFARLRIGIGKPPGQMDPKAFLLQKF+ ARER+D AL EGV+ LKL+L K ES R FN EQKYKH++ T+
Sbjct: 5 LSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKHLKQHTI 216
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays OX=4577 GN=CRS2 PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 9.401e-84 Identity = 117/196 (59.69%), Postives = 147/196 (75.00%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHIRL 206
PWL GLGNPG+KY GTRHNVGFEM+D A +GI MNT+ K++ G G +G+ P+L+ KPQ+YMN SGE+ G LAAYY++PL +DD LP GVLRLQ KGGHG HNGL++VI H G REF RL IGIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+LKG + S RFN QKYK R+
Sbjct: 61 PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2B PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 6.773e-79 Identity = 115/192 (59.90%), Postives = 142/192 (73.96%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYK 202
PWL VGLGNPG+KY GTRHNVGFEMID A+ +G+ MNT+ KA+ G G + D P+LLAKPQTYMN SGES G+LA++Y++PL +D+M LP GVLRLQ KGG G HNG+KSV+ H G R F RL IGIGKPPG MD KAFLLQKF+ +++I+ AL++G E +K L+L G + RFN QKYK
Sbjct: 45 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYK 236
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: PTHC_ARATH (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g18440 PE=2 SV=2) HSP 1 Score: 240.35 bits (612), Expect = 9.148e-79 Identity = 108/194 (55.67%), Postives = 148/194 (76.29%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHI 204
PWL VGLGNPG KY+GTRHNVGFEM+DA A A+GI MNT+N KA+FG+G +G+ P++LAKPQT+MNLSGES G + ++YK+PL + +DD+DLP G LRL KGGHG HNG++S+I +G+R+F RLRIGIG+PPG+MD F+L++FN +E +D Q G+E +++LLL+G +SA NT + + +
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0132800 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.237e-78 Identity = 111/192 (57.81%), Postives = 143/192 (74.48%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYK 202
PWL GLGNPG KY GTRHNVGFEM+D A+ +GI MNT+ K++ G G +G+ P+LL KPQ+Y+N SGE+ G LAAYY++PL +D+M LP GVLRLQ KGGHG HNGL++V+ +RE RL IGIG PPG+MD +AFLLQKF++ R +IDTAL++GV+ ++ L+LKG + S RFN QKYK
Sbjct: 64 PWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYK 255
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2A PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.174e-77 Identity = 116/192 (60.42%), Postives = 138/192 (71.88%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYK 202
PWL VGLGNPG KY GTRHN+GFEMID A+A I MNT+ KA+ G G VG+ P+LL KPQ YMN SGES G LAAYY++PL +DDM L GVLRLQ KGGH HNGLK+V H G R + RL IGIG PPG MD KAFLLQKF+ R+++D L++GVEG+K L+ +G ++S RFN QKYK
Sbjct: 51 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 242
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: PTHM_ORYSJ (Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693900 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.911e-77 Identity = 106/195 (54.36%), Postives = 146/195 (74.87%), Query Frame = 0
Query: 13 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR---FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFNTEQKYKHI 204
+PWLFVGLGNPG Y+GTRHNVGFEMID A+A+GI ++++ KA+ G+G +GDAP++LAKPQT+MN SGES G L +Y+K+PLN+ +DD+DLP LRL KGGHG HNG++S+I H + NR+F RLRIGIG+PPG+MDP F+L+ FN +E +D A G+E ++++ L+G +SA NT Q + +
Sbjct: 54 KPWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINHLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNKSATYVNTAQSSEML 248
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: CRS2L_ORYSJ (CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0347800 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.771e-52 Identity = 82/113 (72.57%), Postives = 92/113 (81.42%), Query Frame = 0
Query: 14 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNG 123
PWLFVGLGNPG+KY+ TRHNVGF+MID FA++QGI + KA+FG+G V P+LLAKPQTYMNLSGES G LAAYYKLPLNR DDMDLPCGVLRLQ KGG+G HNG
Sbjct: 60 PWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: PTH_THEFY (Peptidyl-tRNA hydrolase OS=Thermobifida fusca (strain YX) OX=269800 GN=pth PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.241e-49 Identity = 75/180 (41.67%), Postives = 115/180 (63.89%), Query Frame = 0
Query: 15 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNRF---HDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTES 191
WL VGLGNPG KY G RHNVGF ++D A +G A + VGDAP++LAKP +YMNLSG L+A+YK+P++R HD++D+P L+L+ GG HNGL+S+ G+ ++ R+R+GIG+PPG+MD +F+LQ F+ + R+ +D + + ++ ++ GL ++
Sbjct: 35 WLVVGLGNPGPKYAGNRHNVGFMVVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAKPASYMNLSGGPVAKLSAFYKVPVDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITASL-GSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKELDVHVARAADAVETVVTSGLEKA 213
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Match: PTH_CHLAD (Peptidyl-tRNA hydrolase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) OX=326427 GN=pth PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.165e-48 Identity = 74/186 (39.78%), Postives = 113/186 (60.75%), Query Frame = 0
Query: 15 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAKAQGIEMNTLNCKAIFGQGFVGDAPLLLAKPQTYMNLSGESSGALAAYYKLPLNR----FHDDMDLPCGVLRLQDKGGHGSHNGLKSVIYHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFNASARERIDTALQEGVEGLKLLLLKGLTESARRFN 196
WL VGLGNPG++Y TRHN+GF ++ A+ G+ K+ +G + + L KPQTYMNLSG++ AL +YK+ R +DD+DLP LRL+++G G+HNG++S++ G EF RLRIGIG+PPGQMD ++L +F + L + +++++ +GLT + R+N
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVKPQTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVGQL-GTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLTAAMNRYN 186 The following BLAST results are available for this feature:
BLAST of Cotton_D_gene_10006757 vs. Malus x Domestica v1.0
Analysis Date: 2012-11-01 (BLASTx of BGI-CGP D genome v1.0 vs Malus x domestica Genome v1.0) Total hits: 8
BLAST of Cotton_D_gene_10006757 vs. Vitis vinifera
Analysis Date: 2012-11-01 (BLASTx of BGI-CGP D genome v1.0 vs Vitis vinifera Genome v2.0) Total hits: 4
BLAST of Cotton_D_gene_10006757 vs. TAIR10
Analysis Date: 2019-06-26 (BLASTx of BGI-CGP D genome v1.0 vs Araport11) Total hits: 7
BLAST of Cotton_D_gene_10006757 vs. Prunus Persica v1.0
Analysis Date: 2012-11-01 (BLASTx of BGI-CGP D genome v1.0 vs Prunus persica Genome v1.0) Total hits: 3
BLAST of Cotton_D_gene_10006757 vs. Populus trichicarpa v2.0
Analysis Date: 2012-11-01 (BLASTx of BGI-CGP D genome v1.0 vs Populus Genome v2.0) Total hits: 6
BLAST of Cotton_D_gene_10006757 vs. ExPASy TrEMBL
Analysis Date: 2019-06-26 (BLASTx of BGI-CGP D genome v1.0 vs Uniprot TrEMBL) Total hits: 10
BLAST of Cotton_D_gene_10006757 vs. NCBI nr
Analysis Date: 2019-06-28 (BLASTx of BGI-CGP D genome v1.0 vs NCBI nr) Total hits: 10
BLAST of Cotton_D_gene_10006757 vs. ExPASy Swiss-Prot
Analysis Date: 2019-06-28 (BLASTx of BGI-CGP D genome v1.0 vs UniProt Swiss-Prot) Total hits: 10
InterPro
Analysis Name: InterProScan analysis of Gossypium raimondii D Genome v1.0 (BGI-CGP)
Date Performed: 2012-11-06
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cotton_D_gene_10006757-BGI-CGP_v1.0 ID=Cotton_D_gene_10006757-BGI-CGP_v1.0; Name=Cotton_D_gene_10006757; organism=Gossypium raimondii; type=mRNA; length=4723bpback to top mRNA from alignment at Chr11:6610503..6615225- Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Cotton_D_gene_10006757-BGI-CGP_v1.0 ID=Cotton_D_gene_10006757-BGI-CGP_v1.0; Name=Cotton_D_gene_10006757; organism=Gossypium raimondii; type=mRNA; length=4723bp; location=Sequence derived from: Chr11:6610503..6615225- (Gossypium raimondiiback to top Coding sequence (CDS) from alignment at Chr11:6610503..6615225- >Cotton_D_gene_10006757-BGI-CGP_v1.0 ID=Cotton_D_gene_10006757-BGI-CGP_v1.0; Name=Cotton_D_gene_10006757; organism=Gossypium raimondii; type=CDS; length=636bp; location=Sequence derived from: Chr11:6610503..6615225- (Gossypium raimondiiback to top |