g.barbadense_cottongen_reftransV1_0098082, g.barbadense_cottongen_reftransV1_0098082 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0098082
Unique Nameg.barbadense_cottongen_reftransV1_0098082
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2708
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: Q9M9T1_ARATH (F14L17.7 protein OS=Arabidopsis thaliana GN=F14L17.7 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.839e-39
Identity = 88/120 (73.33%), Postives = 104/120 (86.67%), Query Frame = 1 
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            KRAYDGLLLDA GTLLQLSKPV ETYAS+G K+GLK   AEIK+GFKR F+APWP+KLRY+GDG+PFWKLVVSEATGCS++DYFE+VY++Y NG AW LP+GA ET+ LLK+AG  +  V
Sbjct:   39 KRAYDGLLLDAGGTLLQLSKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSEATGCSDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVV 158
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BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: Q84WA5_ARATH (Putative uncharacterized protein At1g14310 (Fragment) OS=Arabidopsis thaliana GN=At1g14310 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 2.016e-39
Identity = 88/120 (73.33%), Postives = 104/120 (86.67%), Query Frame = 1 
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            KRAYDGLLLDA GTLLQLSKPV ETYAS+G K+GLK   AEIK+GFKR F+APWP+KLRY+GDG+PFWKLVVSEATGCS++DYFE+VY++Y NG AW LP+GA ET+ LLK+AG  +  V
Sbjct:   35 KRAYDGLLLDAGGTLLQLSKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSEATGCSDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVV 154
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BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: U5G434_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s10400g PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.045e-39
Identity = 87/120 (72.50%), Postives = 105/120 (87.50%), Query Frame = 1 
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            K+AYD LLLDA GTLLQL++PVEETYASIG K+GL  +SA+IK+GFKRAFAAPWP+KLRY+GDG+PFWKLVVSEATG +N+DYFEEVY++Y NG AW LPDGA E ++LLK+AG  +  V
Sbjct:   43 KKAYDALLLDAGGTLLQLTRPVEETYASIGRKYGLTASSADIKQGFKRAFAAPWPEKLRYQGDGRPFWKLVVSEATGSTNNDYFEEVYKYYANGEAWYLPDGAYEALYLLKDAGVKVVVV 162
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BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: B9HVA5_POPTR (Haloacid dehalogenase-like hydrolase family protein OS=Populus trichocarpa GN=POPTR_0010s10400g PE=4 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 2.108e-39
Identity = 87/120 (72.50%), Postives = 105/120 (87.50%), Query Frame = 1 
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            K+AYD LLLDA GTLLQL++PVEETYASIG K+GL  +SA+IK+GFKRAFAAPWP+KLRY+GDG+PFWKLVVSEATG +N+DYFEEVY++Y NG AW LPDGA E ++LLK+AG  +  V
Sbjct:   40 KKAYDALLLDAGGTLLQLTRPVEETYASIGRKYGLTASSADIKQGFKRAFAAPWPEKLRYQGDGRPFWKLVVSEATGSTNNDYFEEVYKYYANGEAWYLPDGAYEALYLLKDAGVKVVVV 159
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BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: V4TF12_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032480mg PE=4 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 2.544e-39
Identity = 85/120 (70.83%), Postives = 103/120 (85.83%), Query Frame = 1 
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            K+AYD LLLDA GTLLQL++PVEETYASI  K+GL ++SA+IKKGF++AFAAPWP+KLRYEGDG+PFW+LVVSEATGC+NDDYFEEVYE+Y  G  W LP GA ++I LLK+AG  +  V
Sbjct:   47 KKAYDALLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEVWHLPHGAYQSILLLKDAGVKVAVV 166
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
Q9M9T1_ARATH1.839e-3973.33F14L17.7 protein OS=Arabidopsis thaliana GN=F14L17... [more]
Q84WA5_ARATH2.016e-3973.33Putative uncharacterized protein At1g14310 (Fragme... [more]
U5G434_POPTR2.045e-3972.50Uncharacterized protein OS=Populus trichocarpa GN=... [more]
B9HVA5_POPTR2.108e-3972.50Haloacid dehalogenase-like hydrolase family protei... [more]
V4TF12_9ROSI2.544e-3970.83Uncharacterized protein OS=Citrus clementina GN=CI... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD-like domainGENE3D3.40.50.1000coord: 43..153
e-value: 1.9E-5
score: 24.1
IPR023214HAD-like domainSUPERFAMILY56784HAD-likecoord: 43..155
NoneNo IPR availablePANTHERPTHR12725HALOACID DEHALOGENASE-LIKE HYDROLASEcoord: 26..153
NoneNo IPR availablePANTHERPTHR12725:SF55F14L17.7 PROTEINcoord: 26..153

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0098082 ID=g.barbadense_cottongen_reftransV1_0098082; Name=g.barbadense_cottongen_reftransV1_0098082; organism=Gossypium barbadense; type=contig; length=2708bp
ATTTTTATAAAATTCAAATAATTAAAAAAAAAAAACCTAAGTAGATTAAA
AGGGAAAAACAAAATAAAAGGAGTAGAAGAAAATATGGTGCTAACGGAAA
CAGTTGGAGGCCTGTCCTAGAATCGATCGCCCAAGTAGAAGGGAACACAG
AGGCAGAGCAATCTGATTCAGAAAATGGAATCTTGCTTCACGAAATATTG
GCATAGCAAGACTCTTTTCACATCACTTTATTCCCTTCGCCGTTCTTCCA
TCTCCATTCACTCTGTTAGAAATTCGGTTAAAAGAGCTTACGATGGACTG
CTGTTGGACGCGGCAGGCACTCTCTTGCAATTATCCAAGCCTGTAGAAGA
GACTTACGCTTCTATTGGAGCTAAACACGGTCTGAAATTGAATTCAGCTG
AAATAAAGAAAGGATTTAAAAGGGCTTTTGCTGCTCCCTGGCCTGATAAG
CTCCGTTACGAGGGGGATGGAAAGCCATTTTGGAAACTTGTTGTCTCTGA
AGCCACTGGTTGTTCCAATGACGATTATTTTGAGGAAGTTTATGAGCATT
ATGGAAATGGTTATGCATGGCGTCTTCCAGATGGAGCGTCTGAAACAATA
TGGCTTCTCAAAAATGCTGGAGGTCATATTCATCAAGTATTCCTCTTCTT
TTTCTTTCACAATTAATAATGGTAATACGGATTGATCACAATAGCTTTTC
CACCCACCATTTTATTTCTCACATGGTGAGTGATGGTACAGTTAAAGTGG
CTGTTGTGTCCAATTTTGACACCCGATTGAGGAAGGTATTGAAGGAACTC
AATGTCATAGATCTGTAAGTATCAAGTGCTGTGTTGATGCTGTTGTCTTG
GCGTTTCCTAATACCGGGCCACGCATTTTAATGTATCAATTATTCATTAG
GCTGCTTACAAATGTTTGCCACGTTAATCAGAAAAAACTGAACTTTCTAC
TTCTGTTTTCCCCCTTAATTAGTGGCGATCATATCTTTTTACTCTTAAAA
CTTGTTGGGATACATCTTTTGTTATACTTGACGTGGACTCGATGTTTATC
TAGTTTAGTTCTTCTATGCTTTGCCTCTGATGGCTCATGAAAAGAAAAAG
ACGATTTAAACTTCCCTTCCATACCTCATCTTGTTTTCCACTTCTACTTT
TGTGTTAGATGCCTGACAGGAAAAAAGGGCATAGGCTTCAGCCATTCAAA
TCTTCCATATAATCTTCTTTACTTTTGATTTGTAACCCTCTTTTTAGTTT
ATTTTCAGGTTTGATGCTGTAATTATATCTTCAGAGGTTGGTTATGAAAA
ACCAGATGCAAGGATATTTAAAGCTGCTTTAGGTTTGTATTAAGCACCAA
AGTATATCTTATTCATTGGTAAATAATACATTTAATAGTAATCATAAAGA
TAATAGATTTACTTCCATGCCCTGCTTTTGCTAAATTTTCCATCTCTGTG
ATTAGCTTGGTTATCGATTTGTTTAACATATCACCTTTGTTTAGAAACTT
GAGAATGACAAGTGTTATAATAGGTCTGTCTTGTGGCCTTTTGCTTAAAT
ATCTTGATGCTACATGTTTCACTGTCAATGTATTTGCATGTTCTATGTGA
TGTGGAATTATGGATGCATTCACTGTTTTCTACATTTTCATGAGAAAGAG
ATCTACAACATTGGAGCATTTGAAGTAATAGCCATATAGGATAGCTTATG
ATTAATTCCATGTTTCTCCATATTGTGCTAACCATAGGGAATTTTTAATT
TAATTGCTCAAGTTGATTGCTATTTGTGCTTATAATTGCATGATTAAGTA
TGATATTTCTTTACATACAAACACATAAATAATGGTGTGGTGCTTCAATT
TGCACAACATATCCTATAGCAAACTCTTCTCCTTTTCCTTTTCCAATGGC
ATAACATGATTTATTTTTGAGCCCACCACACTCCATCACTATTTTACTGT
ACACATGGTACTTTGTCCAGTAACTTCAAAGATATGGAAAAATAAATTTA
CGTTTTCTCGCAATAATCCAAAGCCAAAAAGAATGATGATATATCCCTTG
TCAAAGAATCTATCAAAAGATATTTGGAATTGTTGTAGATCAAATTGATG
TGGAGGCTGACAAGGTGGTACATGTGGGGGATGATCTAAAGGCAGATAAA
GTTGGAGCCAATGCTGTCGGGATAGACTGCTGGTAAGTTCACATTCTTTC
AGTGTGTTTAGGCTTGATGTTGTTTGAGATTGCTATCAAGATGCAACACA
ACAAACTTTCTTGTCCACCAAGTGCTTCATATTTGAAACTGACGGCTATT
GTACTTACTTTCTTCCTATATGCACATTGAGTTGAAGCAATTGGTAAAAG
CATTCGTTGCTAATATGTCAATGACGAAAATATAGATGACATGGTGCATT
TATCTTTGTCGAGCAGGTTGTGGGGTAAAGATGTAAAGACATTCGCGGAT
ATAGAGAAGTATATTTTCATCTCAGATCCATAAATCCTTATCTTATTATG
GAAACTCAGGTAGAATTGTAGACTTGCTTGTATGGTTGTTAATCACATCC
AAATTTTGTTGAGATGTTGACACTAAAATGCGCATTGAAGAGCAGAAACT
GATGTTGGGAATTGGGATAGCATAGCAGTGATATTTGCTAATTTAACTGA
AATAGAAATATTTGTGCTCTTAACACAGATGTCCATATTCTCTCTTTTCT
GATAAAAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf