g.barbadense_cottongen_reftransV1_0098082, g.barbadense_cottongen_reftransV1_0098082 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0098082
Unique Nameg.barbadense_cottongen_reftransV1_0098082
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2708
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: D7TNA0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02250 PE=4 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.377e-41
Identity = 90/119 (75.63%), Postives = 105/119 (88.24%), Query Frame = 1
Query:  283 RAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            RAYDGLLLDA GTLLQL+KPVE TYA IG K+GL  +SAEIK+GF+RAFAAPWP+KLRY+GDG+PFWKLVVSEATGC+N+DYFEEVYE+Y NG AW LP GASET++LLK+AG  +  V
Sbjct:   44 RAYDGLLLDAGGTLLQLAKPVESTYADIGRKYGLTASSAEIKQGFRRAFAAPWPEKLRYQGDGRPFWKLVVSEATGCANNDYFEEVYEYYANGDAWHLPTGASETMFLLKDAGVKLAVV 162          
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: A0A067H5R3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024886mg PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.616e-40
Identity = 96/166 (57.83%), Postives = 118/166 (71.08%), Query Frame = 1
Query:  175 MESCFTKYWHSKTLF-----------TXXXXXXXXXXXXXXXXXXXKRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            ME+C +K  H  +L             S      S      V  SVK+AYD +LLDA GTLLQL++PVEETYASI  K+GL ++SA+IKKGF++AFAAPWP+KLRYEGDG+PFW+LVVSEATGC+NDDYFEEVYE+Y  G AW LP GA ++I LLK+AG  +  V
Sbjct:    1 MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVV 166          
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: K4ATS6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g010830.2 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.715e-40
Identity = 85/120 (70.83%), Postives = 100/120 (83.33%), Query Frame = 1
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            +RAYDGLLLDAA TLLQLSKPVEETYA IG K+GL  + AEIK+GFKRAF+APWP+ LRY+ DG+PFWKLVVSEATGCS+D YFEEVY+HY +G AW LP GA +TI +LK +G  +  V
Sbjct:   44 RRAYDGLLLDAANTLLQLSKPVEETYAGIGKKYGLTTSPAEIKQGFKRAFSAPWPENLRYQDDGRPFWKLVVSEATGCSDDTYFEEVYQHYASGEAWHLPAGAYDTILILKRSGVKLAVV 163          

HSP 2 Score: 44.2838 bits (103), Expect = 1.715e-40
Identity = 19/24 (79.17%), Postives = 24/24 (100.00%), Query Frame = 3
Query:  741 VKVAVVSNFDTRLRKVLKELNVID 812
            VK+AVVSNFDTRLRK+LK+LN++D
Sbjct:  158 VKLAVVSNFDTRLRKILKDLNMLD 181          
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: D7KBI9_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_312429 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.067e-40
Identity = 90/120 (75.00%), Postives = 105/120 (87.50%), Query Frame = 1
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            KRAYDGLLLDA GTLLQLSKPV ETYAS+G K+GLK   AEIK+GFKRAF+APWP+KLRY+GDG+PFWKLVVSEATGCS++DYFEEVY++Y NG AW LP+GA ET+ LLK+AG  +  V
Sbjct:   39 KRAYDGLLLDAGGTLLQLSKPVHETYASLGQKYGLKTTPAEIKQGFKRAFSAPWPEKLRYQGDGRPFWKLVVSEATGCSDNDYFEEVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVV 158          
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: A0A0B0NE27_GOSAR (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Gossypium arboreum GN=F383_06343 PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.858e-40
Identity = 119/155 (76.77%), Postives = 121/155 (78.06%), Query Frame = 1
Query:  175 MESCFTKYWHSKTLFTXXXXXXXXXXXXXXXXXXXKRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            MESCFTK WHSK LFTSLY+LRRSSISIHSVRNSVKRAYDGLLLDAAGTLLQLSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLR                            YEHYGNGYAWRLPDGASETIWLLKNAG  +  V
Sbjct:    1 MESCFTKCWHSKALFTSLYALRRSSISIHSVRNSVKRAYDGLLLDAAGTLLQLSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLR----------------------------YEHYGNGYAWRLPDGASETIWLLKNAGVKVAVV 127          

HSP 2 Score: 70.8626 bits (172), Expect = 3.637e-10
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = 3
Query: 2067 KIFGIVVDQIDVEADKVVHVGDDLKADKVGANAVGIDCW 2183
            +IF   +DQIDVEADKVVHVGDDLKADKVGANAVGIDCW
Sbjct:  164 RIFKAALDQIDVEADKVVHVGDDLKADKVGANAVGIDCW 202          
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: A0A067GW36_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024886mg PE=4 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 4.760e-40
Identity = 96/166 (57.83%), Postives = 118/166 (71.08%), Query Frame = 1
Query:  175 MESCFTKYWHSKTLF-----------TXXXXXXXXXXXXXXXXXXXKRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            ME+C +K  H  +L             S      S      V  SVK+AYD +LLDA GTLLQL++PVEETYASI  K+GL ++SA+IKKGF++AFAAPWP+KLRYEGDG+PFW+LVVSEATGC+NDDYFEEVYE+Y  G AW LP GA ++I LLK+AG  +  V
Sbjct:    1 MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVV 166          
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: R0I461_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10010081mg PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.693e-40
Identity = 89/120 (74.17%), Postives = 104/120 (86.67%), Query Frame = 1
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            KRAYDGLLLDA GTLLQLSKPV ETYAS+G K+G+K   AEIK+GFKR FAAPWP+KLRY+GDG+PFWKLVVSEATGCS++DYFEEVY++Y NG AW LP+GA ET+ LLK+AG  +  V
Sbjct:   38 KRAYDGLLLDAGGTLLQLSKPVHETYASLGQKYGVKTTPAEIKQGFKRVFAAPWPEKLRYQGDGRPFWKLVVSEATGCSDNDYFEEVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVV 157          
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: A0A067LAR8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15591 PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 8.609e-40
Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query:  340 PVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            PVEETYASIG K+G+  +SAEIKKGFKRAF+APWP+KLRY+GDG+PFWKLVVSEATGCSNDDYFEEVY++Y NG AW LP+GA ET+  LK AG  +  V
Sbjct:   66 PVEETYASIGRKYGMSTSSAEIKKGFKRAFSAPWPEKLRYQGDGRPFWKLVVSEATGCSNDDYFEEVYKYYANGNAWHLPNGAYETLVFLKEAGVKLAVV 165          

HSP 2 Score: 60.8474 bits (146), Expect = 9.718e-7
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 3
Query: 2064 QKIFGIVVDQIDVEADKVVHVGDDLKADKVGANAVGIDCW 2183
             KIF   +DQ+ VEA + VHVGDDLKADK GANA+GIDCW
Sbjct:  201 PKIFKAALDQVCVEASRAVHVGDDLKADKDGANAIGIDCW 240          
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: V4KZB4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10008537mg PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.875e-40
Identity = 88/120 (73.33%), Postives = 105/120 (87.50%), Query Frame = 1
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            KRAYDGLLLDA GTLLQLSKPV ETYAS+G K+GL+   AEIK+GFKRAF+APWP+KLRY+GDG+PFWKLVVSEATGCS++DYFEEVY++Y NG AW LP+GA ET+ LLK++G  +  V
Sbjct:   41 KRAYDGLLLDAGGTLLQLSKPVHETYASLGQKYGLRTTPAEIKQGFKRAFSAPWPEKLRYQGDGRPFWKLVVSEATGCSDNDYFEEVYQYYANGEAWHLPEGAYETMSLLKDSGVKMAVV 160          
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Match: Q6AWS8_ARATH (At1g14310 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.488e-39
Identity = 88/120 (73.33%), Postives = 104/120 (86.67%), Query Frame = 1
Query:  280 KRAYXXXXXXXXXXXXXXSKPVEETYASIGAKHGLKLNSAEIKKGFKRAFAAPWPDKLRYEGDGKPFWKLVVSEATGCSNDDYFEEVYEHYGNGYAWRLPDGASETIWLLKNAGGHIHQV 639
            KRAYDGLLLDA GTLLQLSKPV ETYAS+G K+GLK   AEIK+GFKR F+APWP+KLRY+GDG+PFWKLVVSEATGCS++DYFE+VY++Y NG AW LP+GA ET+ LLK+AG  +  V
Sbjct:   23 KRAYDGLLLDAGGTLLQLSKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSEATGCSDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVV 142          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of g.barbadense_cottongen_reftransV1_0098082 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
D7TNA0_VITVI7.377e-4175.63Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067H5R3_CITSI1.616e-4057.83Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
K4ATS6_SOLLC1.715e-4070.83Uncharacterized protein OS=Solanum lycopersicum GN... [more]
D7KBI9_ARALL2.067e-4075.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
A0A0B0NE27_GOSAR3.858e-4076.77Haloacid dehalogenase-like hydrolase domain-contai... [more]
A0A067GW36_CITSI4.760e-4057.83Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
R0I461_9BRAS6.693e-4074.17Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
A0A067LAR8_JATCU8.609e-4074.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
V4KZB4_EUTSA8.875e-4073.33Uncharacterized protein OS=Eutrema salsugineum GN=... [more]
Q6AWS8_ARATH1.488e-3973.33At1g14310 OS=Arabidopsis thaliana PE=2 SV=1[more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD-like domainGENE3D3.40.50.1000coord: 43..153
e-value: 1.9E-5
score: 24.1
IPR023214HAD-like domainSUPERFAMILY56784HAD-likecoord: 43..155
NoneNo IPR availablePANTHERPTHR12725HALOACID DEHALOGENASE-LIKE HYDROLASEcoord: 26..153
NoneNo IPR availablePANTHERPTHR12725:SF55F14L17.7 PROTEINcoord: 26..153

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0098082 ID=g.barbadense_cottongen_reftransV1_0098082; Name=g.barbadense_cottongen_reftransV1_0098082; organism=Gossypium barbadense; type=contig; length=2708bp
ATTTTTATAAAATTCAAATAATTAAAAAAAAAAAACCTAAGTAGATTAAA
AGGGAAAAACAAAATAAAAGGAGTAGAAGAAAATATGGTGCTAACGGAAA
CAGTTGGAGGCCTGTCCTAGAATCGATCGCCCAAGTAGAAGGGAACACAG
AGGCAGAGCAATCTGATTCAGAAAATGGAATCTTGCTTCACGAAATATTG
GCATAGCAAGACTCTTTTCACATCACTTTATTCCCTTCGCCGTTCTTCCA
TCTCCATTCACTCTGTTAGAAATTCGGTTAAAAGAGCTTACGATGGACTG
CTGTTGGACGCGGCAGGCACTCTCTTGCAATTATCCAAGCCTGTAGAAGA
GACTTACGCTTCTATTGGAGCTAAACACGGTCTGAAATTGAATTCAGCTG
AAATAAAGAAAGGATTTAAAAGGGCTTTTGCTGCTCCCTGGCCTGATAAG
CTCCGTTACGAGGGGGATGGAAAGCCATTTTGGAAACTTGTTGTCTCTGA
AGCCACTGGTTGTTCCAATGACGATTATTTTGAGGAAGTTTATGAGCATT
ATGGAAATGGTTATGCATGGCGTCTTCCAGATGGAGCGTCTGAAACAATA
TGGCTTCTCAAAAATGCTGGAGGTCATATTCATCAAGTATTCCTCTTCTT
TTTCTTTCACAATTAATAATGGTAATACGGATTGATCACAATAGCTTTTC
CACCCACCATTTTATTTCTCACATGGTGAGTGATGGTACAGTTAAAGTGG
CTGTTGTGTCCAATTTTGACACCCGATTGAGGAAGGTATTGAAGGAACTC
AATGTCATAGATCTGTAAGTATCAAGTGCTGTGTTGATGCTGTTGTCTTG
GCGTTTCCTAATACCGGGCCACGCATTTTAATGTATCAATTATTCATTAG
GCTGCTTACAAATGTTTGCCACGTTAATCAGAAAAAACTGAACTTTCTAC
TTCTGTTTTCCCCCTTAATTAGTGGCGATCATATCTTTTTACTCTTAAAA
CTTGTTGGGATACATCTTTTGTTATACTTGACGTGGACTCGATGTTTATC
TAGTTTAGTTCTTCTATGCTTTGCCTCTGATGGCTCATGAAAAGAAAAAG
ACGATTTAAACTTCCCTTCCATACCTCATCTTGTTTTCCACTTCTACTTT
TGTGTTAGATGCCTGACAGGAAAAAAGGGCATAGGCTTCAGCCATTCAAA
TCTTCCATATAATCTTCTTTACTTTTGATTTGTAACCCTCTTTTTAGTTT
ATTTTCAGGTTTGATGCTGTAATTATATCTTCAGAGGTTGGTTATGAAAA
ACCAGATGCAAGGATATTTAAAGCTGCTTTAGGTTTGTATTAAGCACCAA
AGTATATCTTATTCATTGGTAAATAATACATTTAATAGTAATCATAAAGA
TAATAGATTTACTTCCATGCCCTGCTTTTGCTAAATTTTCCATCTCTGTG
ATTAGCTTGGTTATCGATTTGTTTAACATATCACCTTTGTTTAGAAACTT
GAGAATGACAAGTGTTATAATAGGTCTGTCTTGTGGCCTTTTGCTTAAAT
ATCTTGATGCTACATGTTTCACTGTCAATGTATTTGCATGTTCTATGTGA
TGTGGAATTATGGATGCATTCACTGTTTTCTACATTTTCATGAGAAAGAG
ATCTACAACATTGGAGCATTTGAAGTAATAGCCATATAGGATAGCTTATG
ATTAATTCCATGTTTCTCCATATTGTGCTAACCATAGGGAATTTTTAATT
TAATTGCTCAAGTTGATTGCTATTTGTGCTTATAATTGCATGATTAAGTA
TGATATTTCTTTACATACAAACACATAAATAATGGTGTGGTGCTTCAATT
TGCACAACATATCCTATAGCAAACTCTTCTCCTTTTCCTTTTCCAATGGC
ATAACATGATTTATTTTTGAGCCCACCACACTCCATCACTATTTTACTGT
ACACATGGTACTTTGTCCAGTAACTTCAAAGATATGGAAAAATAAATTTA
CGTTTTCTCGCAATAATCCAAAGCCAAAAAGAATGATGATATATCCCTTG
TCAAAGAATCTATCAAAAGATATTTGGAATTGTTGTAGATCAAATTGATG
TGGAGGCTGACAAGGTGGTACATGTGGGGGATGATCTAAAGGCAGATAAA
GTTGGAGCCAATGCTGTCGGGATAGACTGCTGGTAAGTTCACATTCTTTC
AGTGTGTTTAGGCTTGATGTTGTTTGAGATTGCTATCAAGATGCAACACA
ACAAACTTTCTTGTCCACCAAGTGCTTCATATTTGAAACTGACGGCTATT
GTACTTACTTTCTTCCTATATGCACATTGAGTTGAAGCAATTGGTAAAAG
CATTCGTTGCTAATATGTCAATGACGAAAATATAGATGACATGGTGCATT
TATCTTTGTCGAGCAGGTTGTGGGGTAAAGATGTAAAGACATTCGCGGAT
ATAGAGAAGTATATTTTCATCTCAGATCCATAAATCCTTATCTTATTATG
GAAACTCAGGTAGAATTGTAGACTTGCTTGTATGGTTGTTAATCACATCC
AAATTTTGTTGAGATGTTGACACTAAAATGCGCATTGAAGAGCAGAAACT
GATGTTGGGAATTGGGATAGCATAGCAGTGATATTTGCTAATTTAACTGA
AATAGAAATATTTGTGCTCTTAACACAGATGTCCATATTCTCTCTTTTCT
GATAAAAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf