g.barbadense_cottongen_reftransV1_0098080, g.barbadense_cottongen_reftransV1_0098080 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.043e-38 Identity = 114/319 (35.74%), Postives = 156/319 (48.90%), Query Frame = -2 Query: 881 GSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEK-TFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGH-RVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQR 1831 G S GKRA MED +D S + D FG++DGHGGS+ A Y +K++L ++ K M K + + K D E S + D GSTA A++ +H+ VAN GDSRAV+ + +A+ALS DHKP+R DE RIE++GG V+ W G RV GVLAMSR+ G+R LK +++ +PE+ E E LILASDGLWDV+ NE+A SLV+ I+ +AAA L+ A +GS DNI+ IVV + + Sbjct: 231 GYSSFRGKRASMED--------------------FYDIKSSKIDDKQISLFGIFDGHGGSRAAEY---------------LKEHLFENLMKHPEFMTNTKLAISETYKKTDSEFLDSESHTHRDD-------------GSTASTAVLVGNHLYVANVGDSRAVISKAGKAIALSEDHKPNRSDERKRIESAGG-VVMWAGTWRVGGVLAMSRAFGNRLLKQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAV-----------------SLVK----IEEEPEAAARKLTETAFSRGSGDNITCIVVKFQHDK 479
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.583e-38 Identity = 112/312 (35.90%), Postives = 150/312 (48.08%), Query Frame = -2 Query: 899 WGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVV 1834 +G S GKR+ MED F + I + G+ V GL FGV+DGHGG++ A Y + + L I D + + D E + N DA GSTA A++ ++VAN GDSRAV+CRG A+A+S DHKP + DE RIE +GG V+ RV GVLA+SR+ GDR LK +++ +PE+ E LILASDGLWDV+SNEEA G+ +E DP + A+ L M A Q+GS DNI+ +VV Sbjct: 34 YGYASSPGKRSSMED-------FYETRIDGVEGEIV------GL-------FGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTTA--------------AIADAYNQTDSEFLKSENSQNRDA-------------GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAV--------------GMIKAIE-----DP--EEGAKRLMMEAYQRGSADNITCVVV 277
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 2.119e-38 Identity = 113/314 (35.99%), Postives = 152/314 (48.41%), Query Frame = -2 Query: 893 GSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGH-RVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDL 1831 G S G+RA MED +D S + D + FG++DGHGGS A + + + L + I D +K + + KT S FL + I ED GSTA A+ +HI VAN GDSR V+ + +A+ALSSDHKP+R DE RIE +GG V+ W+G RV GVLAMSR+ G+R+LK +++ EPEV + E LILASDGLWDV+SNE A + + +AAA L+ +A +GS DNI+ IVV Sbjct: 117 GYSSFRGRRANMED--------------------FYDIKSSKVDDNQINLFGIFDGHGGSHAAEHLKKHLFENLLKHPSFITD------TKSAISETYRKT-DSDFLDAETNIN------RED--------------GSTASTAIFVGNHIYVANVGDSRTVMSKAGKAIALSSDHKPNRKDERKRIENAGG-VVTWSGTWRVGGVLAMSRAFGNRFLKRFVVAEPEVQEQEIDDDLEFLILASDGLWDVVSNEHAVAFVK---------------------AEEGPEAAARKLAEIAFARGSTDNITCIVVKF 361
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.054e-37 Identity = 108/321 (33.64%), Postives = 156/321 (48.60%), Query Frame = -2 Query: 881 GSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETV---GSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGH-RVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQR 1831 G S GKR+ MED F I + G V FG++DGHGGS+ A Y ++ + +NL M+ + T L +++ +D +F +T GSTA A++ +H+ VAN GDSR ++ + +A+ALS DHKP+R DE RIE++GG VI W G RV GVLAMSR+ G+R LK +++ EPE+ + E E L+LASDGLWDV+ NE+A +A+ + +AAA L+ A +GS DNI+ IVV + + Sbjct: 103 GYCSFRGKRSTMED-------FYDIKASTIEGQAVC-------------MFGIFDGHGGSRAAEYLKEHLF-----------NNL----------MKHPQFLTDTKLALNETY---------KQTDVAFLESEKDTYRDDGSTASAAVLVGNHLYVANVGDSRTIVSKAGKAIALSDDHKPNRSDERKRIESAGG-VIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEIDHEAELLVLASDGLWDVVPNEDAVALAQS---------------------EEEPEAAARKLTDTAFSRGSADNITCIVVKFRHDK 351
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.437e-37 Identity = 114/313 (36.42%), Postives = 151/313 (48.24%), Query Frame = -2 Query: 899 WGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGH-RVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVV 1834 +G S GKR+ MED F + I + G+ V GL FGV+DGHGGS+ A Y + + L I D + + D E+ + N DA GSTA A++ ++VAN GDSRAV+CRG A A+S DHKP + DE RIE +GG V+ W G RV GVLA+SR+ GDR LK +++ +PE+ E LILASDGLWDV SNEEA V + VE DP + + + L AI++GS DNI+ +VV Sbjct: 34 YGYASSAGKRSSMED-------FFETRIDGIDGEIV------GL-------FGVFDGHGGSRAAEYVKRHLFSNLITHPKFISDT--------------KSAIADAYTHTDSEL---LKSENSHTRDA----------GSTASTAILVGDRLLVANVGDSRAVICRGGNAFAVSRDHKPDQSDERERIENAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVKE--------------VE-----DP--EESTKKLVGEAIKRGSADNITCVVV 277
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: X2C560_BRANA (BnaA07g30430D protein OS=Brassica napus GN=HAB1.1 PE=2 SV=1) HSP 1 Score: 643.654 bits (1659), Expect = 0.000e+0 Identity = 332/501 (66.27%), Postives = 397/501 (79.24%), Query Frame = -2 Query: 866 MEEMSPAVAVTLSLGNSMGDNSGIAAHVEITPIKLVTDAASL---SKMLPKNGNGSIAASESMVQESEEDVILSVDTNGIINEGLLVLNAGSDISLQNAEIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEKNLNR--GSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNE---DASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSK 2344 MEEM+PAVAVTLSL NS+ D+S V+IT +K VTDAA L S M + GS S +V E E + DT+ +I+EGLLV++AGS+++L + EI++GR+LAKAIILGESSIE+VPTA+VL+ D KI D + ASEVVI+LP+E + N RSV+ELDCIPLWG+VSI G R+EMEDAVA +P F+K+PIKML+GD +G+S LT LTGHFFGVYDGHGG QVA+YCRDR+H ALAEEI RIKD LC + E RQ+QWEK FTSCFL VD EI G+I + +SD E VA ETVGSTAVVALVCSSH+VV+NCGDSRAVL RGKEAM LS DHKP R+DEY RIE +GGKVIQW G RVFGVLAMSRS+GDRYLKP++IPEPEV F+PR+RED+CLI+ASDGLWDV+SN+E CEVAR+RIL+WHKK+G P L ERGKG DPA QAAAEYLS+LA+QKGS+DNIS+IVVDLKAQRKFK++ Sbjct: 1 MEEMTPAVAVTLSLANSICDSSP----VDITQLKNVTDAADLLPDSTMEEEPKKGSCDGS--VVDEDEVE-----DTSAVISEGLLVVDAGSELTL-SMEIDNGRVLAKAIILGESSIEEVPTAKVLIQ----DTKIEDCSGVTASEVVIRLPEENSNNHVAKGRSVYELDCIPLWGTVSIQGNRSEMEDAVAVLPHFLKLPIKMLMGD--HEGMSPSLTHLTGHFFGVYDGHGGYQVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWEKVFTSCFLNVDGEIEGRIGRAAAVVGGSSDVVLEAVASETVGSTAVVALVCSSHLVVSNCGDSRAVLYRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSLGDRYLKPYVIPEPEVTFMPRSREDDCLIIASDGLWDVMSNQEVCEVARKRILMWHKKHGAPPLAERGKGTDPACQAAAEYLSVLALQKGSKDNISIIVVDLKAQRKFKTR 483
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: A0A078CD84_BRANA (BnaC06g33910D protein OS=Brassica napus GN=BnaC06g33910D PE=3 SV=1) HSP 1 Score: 641.728 bits (1654), Expect = 0.000e+0 Identity = 333/502 (66.33%), Postives = 396/502 (78.88%), Query Frame = -2 Query: 866 MEEMSPAVAVTLSLGNSMGDNSGIAAHVEITPIKLVTDAASL------SKMLPKNGNGSIAASESMVQESEEDVILSVDTNGIINEGLLVLNAGSDISLQNAEIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEKNLN---RGSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSK 2344 MEEM+PAVAVTLSL NS+ D+S V+IT +K VTDAA L + PK G + S+V E E + DT+ +I+EGLLV++AGS++SL + EIE+GR+LAKAIILGESSIEQVPTA+VL+ D +I DG + ASEVVI+LP+E N N RG RSV+ELDCIPLWG+VSI G R+EMEDAVA +P F+K+PIKML+GD +G+S LT LTGHFFGVYDGHGG QVA+YCRDR+H ALAEEI RIKD LC + E RQ+QWEK FTSCFL VD EI G+I + A + ETVGSTAVVALVCSSH+VV+NCGDSRAVL RGKEAM LS DHKP R+DEY RIE +GGKVIQW G RVFGVLAMSRS+GDRYLKP++IPEPEV F+PR+RED+CLI+ASDGLWDV+SN+E CEVAR+RIL+WHKK+G P L ERGKG DPA QAAAEYLS+LA+QKGS+DNIS+IVVDLKAQRKFK++ Sbjct: 1 MEEMTPAVAVTLSLANSICDSSP----VDITQLKNVTDAADLLPDSTMEEQQPKKG----SCDGSVVDEDEVE-----DTSAVISEGLLVVDAGSELSL-SMEIENGRVLAKAIILGESSIEQVPTAQVLIQ----DTEIEDGSGVTASEVVIRLPEENNNNHVARG-RSVYELDCIPLWGTVSIQGNRSEMEDAVAVLPHFLKLPIKMLMGD--HEGMSPSLTHLTGHFFGVYDGHGGYQVADYCRDRLHYALAEEIERIKDELCKRNTGEGRQVQWEKVFTSCFLNVDGEIEGRIGRAAAAAVAS-------ETVGSTAVVALVCSSHLVVSNCGDSRAVLYRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSLGDRYLKPYVIPEPEVTFMPRSREDDCLIIASDGLWDVMSNQEVCEVARKRILMWHKKHGAPPLAERGKGTDPACQAAAEYLSVLALQKGSKDNISIIVVDLKAQRKFKTR 474
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: D7KR36_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895129 PE=3 SV=1) HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0 Identity = 332/520 (63.85%), Postives = 396/520 (76.15%), Query Frame = -2 Query: 863 MEEMSPAVAVTLSLG-NSMGDNSGIAAHVEITPIKLVTDAASLSKMLPKNG--NGSIAASESMVQESE-----------------EDVILSV--DTNGIINEGLLVLNAGSDISLQNA--EIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEK--NLNRGSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 2344 MEEM+PAVA+TLSL N++ + S VEIT +K VTDAA L NG + V E + ED +LSV D + +I+EGLLV++AGS++SL + EI++GR+LA AII+GESSIEQVPTA+VL+ V+ D DG + ASEVVI+LP+E +L +G RSV+ELDCIPLWG+VSI G R+EMEDA A +P F+K+PIKML+GD +G+S LT LT HFFGVYDGHGG +VA+YCRDR+H ALAEEI RIKD LC + E RQ+QWEK FTSCFL VD EI GKI + +SD E VA ETVGSTAVVALVCSSHIVV+NCGDSRAVL RGKEAM LS DHKP R+DEY RIE +GGKVIQW G RVFGVLAMSRSIGDRYLKP++IPEPEV F+PR+REDECLILASDGLWDV++N+E CE+ARRRIL+WHKKNG L ERGKG DPA QAAA+YLSMLA+QKGS+DNIS+IV+DLKAQRKFK++T Sbjct: 1 MEEMTPAVAMTLSLAANTICEPSP----VEITQLKNVTDAADLLSDQENQSFCNGGTECATEEVGEPDLLKTLSDTRSGSSNVFDEDEVLSVVEDNSAVISEGLLVVDAGSELSLSDTAMEIDNGRVLATAIIVGESSIEQVPTAQVLIAGVNQDTNREDGSAVTASEVVIRLPEENSNHLVKG-RSVYELDCIPLWGTVSIQGNRSEMEDAFAVLPHFLKLPIKMLMGD--HEGMSPSLTHLTSHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWEKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGALPLAERGKGTDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 513
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: M0ZRP5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002573 PE=3 SV=1) HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0 Identity = 339/549 (61.75%), Postives = 403/549 (73.41%), Query Frame = -2 Query: 863 MEEMSPAVAVTLSLGNSMGDNSGIAAHVEITPIKLVTDAASL----SKMLPKNGNGS---------------------------------------IAASESMVQESEEDVILSV--DTNGIINEGLLVLNAGSDISLQNA-EIE---SGRILAKAIILGESSIEQVPTAEVLLTTVS-PDVKISDGFEIKASEVVIQLPKEKN-LNRGSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKIS----QGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 2344 MEEMSPAVAVTLSL +S+ DN I+ HVEIT +KLVTD ASL + +L N S + S+S++Q S+ED ILSV D GI E LL L +SL A EIE +G+I+AK I L E S ++ +V T V+ PD +I+ G +KAS V + LP EK + +SVFEL+C+PLWGSVSI GKR EMEDA+ A+P FMKIPIKM IGD V DG+SQ L+ LT HF+GVYDGHGGSQVA+YC R+H+AL EE+ K +L D + +++RQ+QWEK FT+CFLKVDDE+GGK++ N + S + EP+APETVGSTAVVA++CSSHI+VANCGDSRAVL RGKEA+ALS DHKPSR+DEY RIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMF+PRAREDECL+LASDGLWDV++NEEACEVARRRILLWHKKNG SL ERG+G+DPAAQAAAEYLS +A+QKGS+DNISVIVVDLKA RKFKSK+ Sbjct: 1 MEEMSPAVAVTLSLSSSICDNPAISNHVEITRLKLVTDTASLLSDPASLLHAESNTSWNGNSNGMKVGVGRIPLLTLGESSGKCSLPQTLLGAENGLIVSDSIIQGSDEDEILSVGEDPCGINGEELLPLGTSLQLSLPIAVEIEGINNGQIVAKVISLEERSFDR----KVSNTIVALPDDEITSGPTLKASVVALPLPSEKEPVKESVKSVFELECVPLWGSVSICGKRPEMEDALMAVPNFMKIPIKMFIGDRVIDGLSQSLSHLTSHFYGVYDGHGGSQVADYCCKRVHLALVEELKLPKHDLVDGSVRDTRQVQWEKVFTNCFLKVDDEVGGKVNIDLCDDNMNTSSCTSEPIAPETVGSTAVVAVICSSHIIVANCGDSRAVLYRGKEAVALSIDHKPSREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFVPRAREDECLVLASDGLWDVMTNEEACEVARRRILLWHKKNGTNSLPERGQGVDPAAQAAAEYLSSMALQKGSKDNISVIVVDLKAHRKFKSKS 545
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: A0A059BVZ0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03166 PE=3 SV=1) HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0 Identity = 336/537 (62.57%), Postives = 411/537 (76.54%), Query Frame = -2 Query: 866 MEEMSPAVAVTLSLGNSMGDNSGIAAHVEITPIKLVTDAASL-----------------------SKMLPKNGNG----SIAASE---------SMVQESEEDVILSV--DTNGIINEGLLVLNAGSDISLQNAEIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEKNLNRGS-RSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQG----NEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSL-VERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSK 2344 MEEMSPA+AVTLS+GN + DNSGI++ EIT IKLVT+A++L + M +G G S+ A+E + +Q+++ED I+SV DT + + LL A + ++ +E+ ++LA+AIILG S +VP +E L+ VS + SD +KA+ VV QLPK+K+L +G RSVFELDCIPLWGSVS+ GKR EMEDAV RFMKIPIKML+ + + DGIS LT +T HFFGVYDGHGGS+VA+YC +RIH+ALAEEIG++K N+ + + E+RQ+ WE+ FT+CF +VDDEIGGK+S+G + +AS ASF+PVAPETVGSTAVVALVCSSHI+VANCGDSRAVL RGKEAM LS DHKP + EY RI+A+GGKVIQWNG+RVFGVLAMSRSIGDRYLKPWIIPEPEV F+PRAREDECLI+ASDGLWDV++NEEACEVARRRILLWHKKNGVPS +ERGKG+DPAAQAAAEYLS+LA+ KGS+DNISVIVVDLKAQRKFKSK Sbjct: 1 MEEMSPAIAVTLSVGNLVRDNSGISSSAEITRIKLVTNASNLVSTESVFCCRVDTADSSYVSNLATDMARDDGGGGANESVMATEKGDHLVPNDNSMQDNDEDEIVSVGEDTGLVTTDELL---ATGQVVIK--AVENDQVLAEAIILGNS---EVPASE-LIAAVSSQAEGSDISILKAAAVVSQLPKKKSLTKGGIRSVFELDCIPLWGSVSLCGKRPEMEDAVTTASRFMKIPIKMLVSEHMIDGISPSLTHVTSHFFGVYDGHGGSRVADYCCERIHLALAEEIGQVKGNIGNGSVGEARQVMWERAFTNCFQRVDDEIGGKVSRGIPSDHGNASAASFKPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLLRGKEAMPLSVDHKPDTEKEYARIDAAGGKVIQWNGYRVFGVLAMSRSIGDRYLKPWIIPEPEVTFVPRAREDECLIVASDGLWDVMTNEEACEVARRRILLWHKKNGVPSSPLERGKGVDPAAQAAAEYLSVLALDKGSKDNISVIVVDLKAQRKFKSK 528 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098080 ID=g.barbadense_cottongen_reftransV1_0098080; Name=g.barbadense_cottongen_reftransV1_0098080; organism=Gossypium barbadense; type=contig; length=3470bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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