g.barbadense_cottongen_reftransV1_0098080, g.barbadense_cottongen_reftransV1_0098080 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 335/526 (63.69%), Postives = 394/526 (74.90%), Query Frame = -2 Query: 863 MEEMSPAVAVTLSLG-NSMGDNSGIAAHVEITPIKLVTDAASLSKMLPKNG--NGSIAASESMVQESEE-----------------------DVILSV--DTNGIINEGLLVLNAGSDISLQNA--EIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEK--NLNRGSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 2344 MEEM+PAVA+TLSL N+M ++S VEIT +K VTDAA L NG + V E EE D +LSV D + +I+EGLLV++AGS++SL N EI++GR+LA AII+GESSIEQVPTAEVL+ V+ D SEVVI+LP E +L +G RSV+ELDCIPLWG+VSI G R+EMEDA A P F+K+PIKML+GD +G+S LT LTGHFFGVYDGHGG +VA+YCRDR+H ALAEEI RIKD LC + E RQ+QW+K FTSCFL VD EI GKI + +SD E VA ETVGSTAVVALVCSSHIVV+NCGDSRAVL RGKEAM LS DHKP R+DEY RIE +GGKVIQW G RVFGVLAMSRSIGDRYLKP++IPEPEV F+PR+REDECLILASDGLWDV++N+E CE+ARRRIL+WHKKNG P L ERGKGIDPA QAAA+YLSMLA+QKGS+DNIS+IV+DLKAQRKFK++T Sbjct: 1 MEEMTPAVAMTLSLAANTMCESSP----VEITQLKNVTDAADLLSDSENQSFCNGGTECTMEDVSELEEVGEQDLLKTLSDTRSGSSNVFDEDDVLSVVEDNSAVISEGLLVVDAGSELSLSNTAMEIDNGRVLATAIIVGESSIEQVPTAEVLIAGVNQDTN--------TSEVVIRLPDENSNHLVKG-RSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGD--HEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 511
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=1 SV=2) HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0 Identity = 320/519 (61.66%), Postives = 398/519 (76.69%), Query Frame = -2 Query: 863 MEEMSPAVAVTLSLGNSMGDNSGIAAHVEITPIKLVTDAASL----SKMLPKNG-----NGSIAASESM-------------VQESEEDVILSVDTNGIINEGLLVLNAGSDISLQNA-EIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEK-NLNRGSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASD-ASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 2344 MEE+SPAVA+TL L N+M D SGI++ +I+ ++ VTDAA + + NG GS++ +++ VQESEED L D II+EGL+V++A S+ISL + E ++GR+LA AIIL E++IEQVPTAEVL+ +++ DV + E+ SEVVI+LP+E N+ RGSRSV+EL+CIPLWG++SI G R+EMEDAV A+P F+KIPIKML+GD +G+S L LT HFFGVYDGHGG+QVA+YC DRIH ALAEEI RIK+ LC + E RQ+QWEK F C+LKVDDE+ GKI++ +SD E V+PETVGSTAVVALVCSSHI+V+NCGDSRAVL RGK++M LS DHKP R+DEY RIE +GGKVIQW G RV GVLAMSRSIGD+YL+P++IP+PEV F+PRAREDECLILASDGLWDV+SN+EAC+ ARRRIL WHKKNG L ERG G D A QAAAEYLS LAIQ GS+DNIS+IV+DLKAQRKFK+++ Sbjct: 1 MEEISPAVALTLGLANTMCD-SGISSTFDISELENVTDAADMLCNQKRQRYSNGVVDCIMGSVSEEKTLSEVRSLSSDFSVTVQESEEDEPLVSDAT-IISEGLIVVDARSEISLPDTVETDNGRVLATAIILNETTIEQVPTAEVLIASLNHDVNM----EVATSEVVIRLPEENPNVARGSRSVYELECIPLWGTISICGGRSEMEDAVRALPHFLKIPIKMLMGD--HEGMSPSLPYLTSHFFGVYDGHGGAQVADYCHDRIHSALAEEIERIKEELCRRNTGEGRQVQWEKVFVDCYLKVDDEVKGKINRPVVGSSDRMVLEAVSPETVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGARVSGVLAMSRSIGDQYLEPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQEACDFARRRILAWHKKNGALPLAERGVGEDQACQAAAEYLSKLAIQMGSKDNISIIVIDLKAQRKFKTRS 511
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=1 SV=1) HSP 1 Score: 465.692 bits (1197), Expect = 2.629e-150 Identity = 224/346 (64.74%), Postives = 270/346 (78.03%), Query Frame = -2 Query: 863 EKNLNRGSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCD-DTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGV-PSLVER-GKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 1891 E + G+RSVF ++C+PLWG SI G+R EMEDAV A+ RF IP+ ML G+ V DG+ L HFFGVYDGHGG+QVANYCR+R+H AL EE+ RI+ ++ + + +WE+ F CF +VD+E+GG S+G E VAPETVGSTAVVA++CSSHI+VANCGDSRAVLCRGK+ + LS DHKP+R+DEY RIEA GGKVIQWNG+RVFGVLAMSRSIGDRYLKPWIIP PE+ +PRA++DECL+LASDGLWDV+SNEE C+VAR+RILLWHKKNG P+ R G DPAA+AAAE LS LA+QKGS+DNISVIVVDLKA RKFKSK+ Sbjct: 131 EARVAAGARSVFAVECVPLWGHKSICGRRPEMEDAVVAVSRFFDIPLWMLTGNSVVDGLDPMSFRLPAHFFGVYDGHGGAQVANYCRERLHAALVEELSRIEGSVSGANLGSVEFKKKWEQAFVDCFSRVDEEVGGNASRG---------EAVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKQPVPLSVDHKPNREDEYARIEAEGGKVIQWNGYRVFGVLAMSRSIGDRYLKPWIIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDVARKRILLWHKKNGTNPASAPRSGDSSDPAAEAAAECLSKLALQKGSKDNISVIVVDLKAHRKFKSKS 467
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1) HSP 1 Score: 447.203 bits (1149), Expect = 1.594e-143 Identity = 213/342 (62.28%), Postives = 258/342 (75.44%), Query Frame = -2 Query: 863 SRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLC--DDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVE----RGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 1870 +RSVF +DC+PLWG SI G+R EMED A +PRF +P+ M+ GD DG+ + L HFF VYDGHGG QVANYCR RIH L EE+ R +D+ C D + ES+++ WEK F CF +VD E+GG + G PVAP+TVGSTAVVA+VCSSH++VANCGDSRAVLCRGK+ + LS DHKP+R+DEY RIEA GGKVIQWNG+RV GVLAMSRSIGD+YLKP+IIP PEV + RA++D+CLILASDGLWDV+SNEE C+ AR+RILLWHKKN + G DPAAQAAA+YLS LA+QKGS+DNI+V+V+DLKA RKFKSK Sbjct: 113 ARSVFAMDCVPLWGLESICGRRPEMEDDYAVVPRFFDLPLWMVAGDAAVDGLDRASFRLPAHFFAVYDGHGGVQVANYCRKRIHAVLTEELRRAEDDACGSDLSGLESKKL-WEKAFVDCFSRVDAEVGGNAASGAP--------PVAPDTVGSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNREDEYARIEALGGKVIQWNGYRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCDAARKRILLWHKKNAATASTSSAQISGDSSDPAAQAAADYLSKLALQKGSKDNITVVVIDLKAHRKFKSKA 445
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=3 SV=1) HSP 1 Score: 428.713 bits (1101), Expect = 1.999e-137 Identity = 207/339 (61.06%), Postives = 259/339 (76.40%), Query Frame = -2 Query: 869 GSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFD--GISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPS-LVERGKG-IDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKS 1873 G RSV+ +DC P+WG S G+ AEMEDA AA+PRF +P+++L D G+ L H FGV+DGHGG++VANYCR+RIHV L+EE+ R+ NL + + ++ W+ FT CF +VDDE+ G++++ + EPV E VGSTAVVALVCSSH+VVANCGDSR VLCRGKE +ALS DHKP R DE RIEA GGKVIQWNG+RV G+LAMSRSIGDRYLKP++IP+PEVM +PRA++D+CLILASDGLWDV+SNEEAC+VARR+ILLWHK NG S L + G+G DPAAQAAA+YL LA++KGS DNI+VIVVDLK ++K K+ Sbjct: 48 GKRSVYLMDCAPVWGCASTRGRSAEMEDASAAVPRFADVPVRLLASRRDLDALGLDADALRLPAHLFGVFDGHGGAEVANYCRERIHVVLSEELKRLGKNLGEMGEVDMKE-HWDDVFTKCFQRVDDEVSGRVTRVVNGGGEVRSEPVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGKEPVALSIDHKPDRKDERARIEAQGGKVIQWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVMVVPRAKDDDCLILASDGLWDVVSNEEACKVARRQILLWHKNNGAASPLSDEGEGSTDPAAQAAADYLMRLALKKGSEDNITVIVVDLKPRKKLKN 385
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1) HSP 1 Score: 412.149 bits (1058), Expect = 1.579e-130 Identity = 214/375 (57.07%), Postives = 269/375 (71.73%), Query Frame = -2 Query: 863 VKISDGFEIKASEVV----IQLPKEKNLNRG-SRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVA--PETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLV-----ERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 1951 V IS G EI S+ + ++K L+R SRS+FE C+PL+G SI G+R EMED+V+ +PRF+++ L+ V +G + L+ HFFGVYDGHGGSQVANYCR+R+H+AL EEI + K CD ++ Q +W+K + F++VD EI E VA PETVGST+VVA+V +HI VANCGDSRAVLCRGK +ALS DHKP RDDE RIEA+GGKVI+WNG RVFGVLAMSRSIGDRYLKP +IP+PEV + R +ED+CLILASDGLWDV++NEE C++AR+RILLWHKKN + +RG+G DPAA +AAEYLS +A+QKGS+DNISV+VVDLK RKFKSK+ Sbjct: 69 VDISAGDEINGSDEFDPRSMNQSEKKVLSRTESRSLFEFKCVPLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFN---PHLSAHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDG---DTWQEKWKKALFNSFMRVDSEI----------------ETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSKDNISVVVVDLKGIRKFKSKS 421
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2) HSP 1 Score: 412.535 bits (1059), Expect = 1.656e-130 Identity = 222/370 (60.00%), Postives = 268/370 (72.43%), Query Frame = -2 Query: 866 VKISDGFEIKASEVVIQLPKEKNLNRG-SRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCD-DTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGV---PSLV---ERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSK 1951 V IS G EI S++ + +K ++R SRS+FE +PL+G SI G+R EMEDAV+ +PRF++ ++ D FD S HFFGVYDGHGGSQVANYCR+R+H+ALAEEI + K LCD DT E +W+K + FL+VD EI E VAPETVGST+VVA+V SHI VANCGDSRAVLCRGK A+ LS DHKP R+DE RIEA+GGKVIQWNG RVFGVLAMSRSIGDRYLKP IIP+PEV + R +ED+CLILASDG+WDV+++EEACE+AR+RILLWHKKN V SL+ R +G DPAA +AAEYLS LAIQ+GS+DNISV+VVDLK +RK KSK Sbjct: 92 VDISAGDEINGSDITSE---KKMISRTESRSLFEFKSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSML-DGRFDPQS------AAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLE----KWKKALFNSFLRVDSEI----------------ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRRKLKSK 431
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.016e-79 Identity = 158/331 (47.73%), Postives = 203/331 (61.33%), Query Frame = -2 Query: 863 GSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDG---ISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNL-----CDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 1831 G+VS+IG+R EMEDA+ F+ P + +G + + FF VYDGHGGS+VA CR+R+HV LAEE+ R++ L D E R +W++ +CF +VD E+GG A +TVGSTAVVA+V IVVANCGDSRAVL RG A+ LSSDHKP R DE R+EA+GG+VI WNG+R+ GVLA SRSIGD YLKP++I EPEV + R +DE LILASDGLWDV+SN+ AC++A R L + P V D AA L LAI +GS+DNISV+VV+L R+ +S+T Sbjct: 92 GAVSVIGRRREMEDAI-----FVAAPFLAASKEAAVEGSGVAEEEGKEEDEGFFAVYDGHGGSRVAEACRERMHVVLAEEV-RVRRLLQGGGGGADVEDEDRA-RWKEAMAACFTRVDGEVGG-----------AEEADTGEQTVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTDKDEFLILASDGLWDVVSNDVACKIA-RNCLSGRAASKYPESVSGSTAADAAA-----LLVELAISRGSKDNISVVVVEL---RRLRSRT 395
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 1.534e-73 Identity = 158/324 (48.77%), Postives = 201/324 (62.04%), Query Frame = -2 Query: 866 GSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIG--RIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSK 1831 GSVS+IG+R EMEDAVA FM G G +G D FF VYDGHGGS+VA CR R+HV LAEE+ R++ S ++W++ + F ++D E+ G ++ EP TVGSTAVVA+V IVVANCGDSRAVL RG A+ LS+DHKP R DE R+EA+GG+VI WNG+RV GVLA SRSIGD YLKP++ EPEV + R +DE LILASDGLWDV+SNE AC++AR + NG + + +A AA L+ LA+ +GSRDNISV+VV+L R+ KS+ Sbjct: 79 GSVSVIGRRREMEDAVAIERTFMA---STGDGAGAIRGGGEGEED----FFAVYDGHGGSRVAEACRKRMHVVLAEEVSLRRLRGQ-----SASGGDVRWKEAMLASFARMDGEVVGSVAAAAPRVDGT--EPSGFRTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYLKPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNEVACKIARNCL------NGRAASMFPESVSGSSAADAAALLAELAVSRGSRDNISVVVVEL---RRLKSR 379
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 3.087e-70 Identity = 140/320 (43.75%), Postives = 186/320 (58.13%), Query Frame = -2 Query: 890 PLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEI---GGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLK 1840 P +G S+ G+R EMEDAVA P F S ++ H+FGVYDGHG S VA CR+R+H + EE+ +S + +W+ T F ++D E+ G + N + A ++VGSTAVV+++ IVVANCGDSRAVLCR + + LS+DHKP R DE RIE +GG+VI W+ RV GVLAMSR+IGD YLKP++ EPEV R R+D+CLILASDGLWDV+SNE AC VAR + + G E D A A+ L+ LA+ + S DN+SV+V+DL+ Sbjct: 76 PRYGVSSVCGRRREMEDAVAIHPSFS----------------SPKNSEFPQHYFGVYDGHGCSHVAARCRERLHKLVQEEL----------SSDMEDEEEWKTTMERSFTRMDKEVVSWGDSVVTAN---CKCDLQTPACDSVGSTAVVSVITPDKIVVANCGDSRAVLCRNGKPVPLSTDHKPDRPDELDRIEGAGGRVIYWDCPRVLGVLAMSRAIGDNYLKPYVSCEPEVTITDR-RDDDCLILASDGLWDVVSNETACSVAR----MCLRGGGRRQDNEDPAISDKACTEASVLLTKLALARNSSDNVSVVVIDLR 361
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: X2C560_BRANA (BnaA07g30430D protein OS=Brassica napus GN=HAB1.1 PE=2 SV=1) HSP 1 Score: 643.654 bits (1659), Expect = 0.000e+0 Identity = 332/501 (66.27%), Postives = 397/501 (79.24%), Query Frame = -2 Query: 866 MEEMSPAVAVTLSLGNSMGDNSGIAAHVEITPIKLVTDAASL---SKMLPKNGNGSIAASESMVQESEEDVILSVDTNGIINEGLLVLNAGSDISLQNAEIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEKNLNR--GSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNE---DASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSK 2344 MEEM+PAVAVTLSL NS+ D+S V+IT +K VTDAA L S M + GS S +V E E + DT+ +I+EGLLV++AGS+++L + EI++GR+LAKAIILGESSIE+VPTA+VL+ D KI D + ASEVVI+LP+E + N RSV+ELDCIPLWG+VSI G R+EMEDAVA +P F+K+PIKML+GD +G+S LT LTGHFFGVYDGHGG QVA+YCRDR+H ALAEEI RIKD LC + E RQ+QWEK FTSCFL VD EI G+I + +SD E VA ETVGSTAVVALVCSSH+VV+NCGDSRAVL RGKEAM LS DHKP R+DEY RIE +GGKVIQW G RVFGVLAMSRS+GDRYLKP++IPEPEV F+PR+RED+CLI+ASDGLWDV+SN+E CEVAR+RIL+WHKK+G P L ERGKG DPA QAAAEYLS+LA+QKGS+DNIS+IVVDLKAQRKFK++ Sbjct: 1 MEEMTPAVAVTLSLANSICDSSP----VDITQLKNVTDAADLLPDSTMEEEPKKGSCDGS--VVDEDEVE-----DTSAVISEGLLVVDAGSELTL-SMEIDNGRVLAKAIILGESSIEEVPTAKVLIQ----DTKIEDCSGVTASEVVIRLPEENSNNHVAKGRSVYELDCIPLWGTVSIQGNRSEMEDAVAVLPHFLKLPIKMLMGD--HEGMSPSLTHLTGHFFGVYDGHGGYQVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWEKVFTSCFLNVDGEIEGRIGRAAAVVGGSSDVVLEAVASETVGSTAVVALVCSSHLVVSNCGDSRAVLYRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSLGDRYLKPYVIPEPEVTFMPRSREDDCLIIASDGLWDVMSNQEVCEVARKRILMWHKKHGAPPLAERGKGTDPACQAAAEYLSVLALQKGSKDNISIIVVDLKAQRKFKTR 483
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: A0A078CD84_BRANA (BnaC06g33910D protein OS=Brassica napus GN=BnaC06g33910D PE=3 SV=1) HSP 1 Score: 641.728 bits (1654), Expect = 0.000e+0 Identity = 333/502 (66.33%), Postives = 396/502 (78.88%), Query Frame = -2 Query: 866 MEEMSPAVAVTLSLGNSMGDNSGIAAHVEITPIKLVTDAASL------SKMLPKNGNGSIAASESMVQESEEDVILSVDTNGIINEGLLVLNAGSDISLQNAEIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEKNLN---RGSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSK 2344 MEEM+PAVAVTLSL NS+ D+S V+IT +K VTDAA L + PK G + S+V E E + DT+ +I+EGLLV++AGS++SL + EIE+GR+LAKAIILGESSIEQVPTA+VL+ D +I DG + ASEVVI+LP+E N N RG RSV+ELDCIPLWG+VSI G R+EMEDAVA +P F+K+PIKML+GD +G+S LT LTGHFFGVYDGHGG QVA+YCRDR+H ALAEEI RIKD LC + E RQ+QWEK FTSCFL VD EI G+I + A + ETVGSTAVVALVCSSH+VV+NCGDSRAVL RGKEAM LS DHKP R+DEY RIE +GGKVIQW G RVFGVLAMSRS+GDRYLKP++IPEPEV F+PR+RED+CLI+ASDGLWDV+SN+E CEVAR+RIL+WHKK+G P L ERGKG DPA QAAAEYLS+LA+QKGS+DNIS+IVVDLKAQRKFK++ Sbjct: 1 MEEMTPAVAVTLSLANSICDSSP----VDITQLKNVTDAADLLPDSTMEEQQPKKG----SCDGSVVDEDEVE-----DTSAVISEGLLVVDAGSELSL-SMEIENGRVLAKAIILGESSIEQVPTAQVLIQ----DTEIEDGSGVTASEVVIRLPEENNNNHVARG-RSVYELDCIPLWGTVSIQGNRSEMEDAVAVLPHFLKLPIKMLMGD--HEGMSPSLTHLTGHFFGVYDGHGGYQVADYCRDRLHYALAEEIERIKDELCKRNTGEGRQVQWEKVFTSCFLNVDGEIEGRIGRAAAAAVAS-------ETVGSTAVVALVCSSHLVVSNCGDSRAVLYRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSLGDRYLKPYVIPEPEVTFMPRSREDDCLIIASDGLWDVMSNQEVCEVARKRILMWHKKHGAPPLAERGKGTDPACQAAAEYLSVLALQKGSKDNISIIVVDLKAQRKFKTR 474
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: D7KR36_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895129 PE=3 SV=1) HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0 Identity = 332/520 (63.85%), Postives = 396/520 (76.15%), Query Frame = -2 Query: 863 MEEMSPAVAVTLSLG-NSMGDNSGIAAHVEITPIKLVTDAASLSKMLPKNG--NGSIAASESMVQESE-----------------EDVILSV--DTNGIINEGLLVLNAGSDISLQNA--EIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEK--NLNRGSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 2344 MEEM+PAVA+TLSL N++ + S VEIT +K VTDAA L NG + V E + ED +LSV D + +I+EGLLV++AGS++SL + EI++GR+LA AII+GESSIEQVPTA+VL+ V+ D DG + ASEVVI+LP+E +L +G RSV+ELDCIPLWG+VSI G R+EMEDA A +P F+K+PIKML+GD +G+S LT LT HFFGVYDGHGG +VA+YCRDR+H ALAEEI RIKD LC + E RQ+QWEK FTSCFL VD EI GKI + +SD E VA ETVGSTAVVALVCSSHIVV+NCGDSRAVL RGKEAM LS DHKP R+DEY RIE +GGKVIQW G RVFGVLAMSRSIGDRYLKP++IPEPEV F+PR+REDECLILASDGLWDV++N+E CE+ARRRIL+WHKKNG L ERGKG DPA QAAA+YLSMLA+QKGS+DNIS+IV+DLKAQRKFK++T Sbjct: 1 MEEMTPAVAMTLSLAANTICEPSP----VEITQLKNVTDAADLLSDQENQSFCNGGTECATEEVGEPDLLKTLSDTRSGSSNVFDEDEVLSVVEDNSAVISEGLLVVDAGSELSLSDTAMEIDNGRVLATAIIVGESSIEQVPTAQVLIAGVNQDTNREDGSAVTASEVVIRLPEENSNHLVKG-RSVYELDCIPLWGTVSIQGNRSEMEDAFAVLPHFLKLPIKMLMGD--HEGMSPSLTHLTSHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWEKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGALPLAERGKGTDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 513
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: M0ZRP5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002573 PE=3 SV=1) HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0 Identity = 339/549 (61.75%), Postives = 403/549 (73.41%), Query Frame = -2 Query: 863 MEEMSPAVAVTLSLGNSMGDNSGIAAHVEITPIKLVTDAASL----SKMLPKNGNGS---------------------------------------IAASESMVQESEEDVILSV--DTNGIINEGLLVLNAGSDISLQNA-EIE---SGRILAKAIILGESSIEQVPTAEVLLTTVS-PDVKISDGFEIKASEVVIQLPKEKN-LNRGSRSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKIS----QGNEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSLVERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSKT 2344 MEEMSPAVAVTLSL +S+ DN I+ HVEIT +KLVTD ASL + +L N S + S+S++Q S+ED ILSV D GI E LL L +SL A EIE +G+I+AK I L E S ++ +V T V+ PD +I+ G +KAS V + LP EK + +SVFEL+C+PLWGSVSI GKR EMEDA+ A+P FMKIPIKM IGD V DG+SQ L+ LT HF+GVYDGHGGSQVA+YC R+H+AL EE+ K +L D + +++RQ+QWEK FT+CFLKVDDE+GGK++ N + S + EP+APETVGSTAVVA++CSSHI+VANCGDSRAVL RGKEA+ALS DHKPSR+DEY RIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMF+PRAREDECL+LASDGLWDV++NEEACEVARRRILLWHKKNG SL ERG+G+DPAAQAAAEYLS +A+QKGS+DNISVIVVDLKA RKFKSK+ Sbjct: 1 MEEMSPAVAVTLSLSSSICDNPAISNHVEITRLKLVTDTASLLSDPASLLHAESNTSWNGNSNGMKVGVGRIPLLTLGESSGKCSLPQTLLGAENGLIVSDSIIQGSDEDEILSVGEDPCGINGEELLPLGTSLQLSLPIAVEIEGINNGQIVAKVISLEERSFDR----KVSNTIVALPDDEITSGPTLKASVVALPLPSEKEPVKESVKSVFELECVPLWGSVSICGKRPEMEDALMAVPNFMKIPIKMFIGDRVIDGLSQSLSHLTSHFYGVYDGHGGSQVADYCCKRVHLALVEELKLPKHDLVDGSVRDTRQVQWEKVFTNCFLKVDDEVGGKVNIDLCDDNMNTSSCTSEPIAPETVGSTAVVAVICSSHIIVANCGDSRAVLYRGKEAVALSIDHKPSREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFVPRAREDECLVLASDGLWDVMTNEEACEVARRRILLWHKKNGTNSLPERGQGVDPAAQAAAEYLSSMALQKGSKDNISVIVVDLKAHRKFKSKS 545
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Match: A0A059BVZ0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03166 PE=3 SV=1) HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0 Identity = 336/537 (62.57%), Postives = 411/537 (76.54%), Query Frame = -2 Query: 866 MEEMSPAVAVTLSLGNSMGDNSGIAAHVEITPIKLVTDAASL-----------------------SKMLPKNGNG----SIAASE---------SMVQESEEDVILSV--DTNGIINEGLLVLNAGSDISLQNAEIESGRILAKAIILGESSIEQVPTAEVLLTTVSPDVKISDGFEIKASEVVIQLPKEKNLNRGS-RSVFELDCIPLWGSVSIIGKRAEMEDAVAAMPRFMKIPIKMLIGDCVFDGISQGLTDLTGHFFGVYDGHGGSQVANYCRDRIHVALAEEIGRIKDNLCDDTSKESRQMQWEKTFTSCFLKVDDEIGGKISQG----NEDASDASFEPVAPETVGSTAVVALVCSSHIVVANCGDSRAVLCRGKEAMALSSDHKPSRDDEYVRIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAREDECLILASDGLWDVISNEEACEVARRRILLWHKKNGVPSL-VERGKGIDPAAQAAAEYLSMLAIQKGSRDNISVIVVDLKAQRKFKSK 2344 MEEMSPA+AVTLS+GN + DNSGI++ EIT IKLVT+A++L + M +G G S+ A+E + +Q+++ED I+SV DT + + LL A + ++ +E+ ++LA+AIILG S +VP +E L+ VS + SD +KA+ VV QLPK+K+L +G RSVFELDCIPLWGSVS+ GKR EMEDAV RFMKIPIKML+ + + DGIS LT +T HFFGVYDGHGGS+VA+YC +RIH+ALAEEIG++K N+ + + E+RQ+ WE+ FT+CF +VDDEIGGK+S+G + +AS ASF+PVAPETVGSTAVVALVCSSHI+VANCGDSRAVL RGKEAM LS DHKP + EY RI+A+GGKVIQWNG+RVFGVLAMSRSIGDRYLKPWIIPEPEV F+PRAREDECLI+ASDGLWDV++NEEACEVARRRILLWHKKNGVPS +ERGKG+DPAAQAAAEYLS+LA+ KGS+DNISVIVVDLKAQRKFKSK Sbjct: 1 MEEMSPAIAVTLSVGNLVRDNSGISSSAEITRIKLVTNASNLVSTESVFCCRVDTADSSYVSNLATDMARDDGGGGANESVMATEKGDHLVPNDNSMQDNDEDEIVSVGEDTGLVTTDELL---ATGQVVIK--AVENDQVLAEAIILGNS---EVPASE-LIAAVSSQAEGSDISILKAAAVVSQLPKKKSLTKGGIRSVFELDCIPLWGSVSLCGKRPEMEDAVTTASRFMKIPIKMLVSEHMIDGISPSLTHVTSHFFGVYDGHGGSRVADYCCERIHLALAEEIGQVKGNIGNGSVGEARQVMWERAFTNCFQRVDDEIGGKVSRGIPSDHGNASAASFKPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLLRGKEAMPLSVDHKPDTEKEYARIDAAGGKVIQWNGYRVFGVLAMSRSIGDRYLKPWIIPEPEVTFVPRAREDECLIVASDGLWDVMTNEEACEVARRRILLWHKKNGVPSSPLERGKGVDPAAQAAAEYLSVLALDKGSKDNISVIVVDLKAQRKFKSK 528 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
Pagesback to top
BLAST of g.barbadense_cottongen_reftransV1_0098080 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098080 ID=g.barbadense_cottongen_reftransV1_0098080; Name=g.barbadense_cottongen_reftransV1_0098080; organism=Gossypium barbadense; type=contig; length=3470bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|