g.barbadense_cottongen_reftransV1_0098079, g.barbadense_cottongen_reftransV1_0098079 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0098079
Unique Nameg.barbadense_cottongen_reftransV1_0098079
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2480
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At05chromosomeg.barbadense_cottongen_reftransV1_0098079:1..2480 .
At05:74799007..74912085 -
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A061FUN6_THECC (Tudor/PWWP/MBT superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_043070 PE=4 SV=1)

HSP 1 Score: 1044.26 bits (2699), Expect = 0.000e+0
Identity = 588/924 (63.64%), Postives = 661/924 (71.54%), Query Frame = -1
Query:    6 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQ-------------FSEEKTL--EVVECATPMDTDGEQKSEASKT----RRSYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEENPFIASAPCGDH----------ALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLG-----------DQTSSIATFHPEIPSVPATVGEEICTIP------TPS-----GEETCSIPPKLDEETTIRPMTLAEETPS---------------------------------IPRTLGEDAPSVPAAFSEEAPAVTLTFSEGTHTLPGTLDCETKTVLTTVYEETT------------IPATLGQETPTFPATLGXXXXXXXXXXXEANRSIPSNLDEETRTNPVTLAEETPSTLETLGEE 2480
            YDKIKFQKVEN GVR+ESS+RDG+DVSLS SSFEPDKL+DYMK LAESP  GGDR+DLVI KAQLLAFYRLKGYHQLPE Q              SEE     E +E  TPMDTD EQ S   +T    R SYLKRKHNLKDGLYPSKKERSLSELM ETFDSPD E G+D + N+ PSSS GKKRKA+DS +DSV+QEGRKT    K SL+TPHFPKPSFKIGE I RAASQMTGSP I K       KLDGG E +A  GYDVP DN EDA+RKR ++  EYSSLDELL QLHLAACDPMK YSS NI ISFFSDFRDS+V+D+L  DKA G+RKKSPNSIIGF ETFEFEDM+DTYWT+RIVQNGSEE P  G  RGQYQ VPVEL+KP+QK RKSRKRYSD +HDLTA+KPPGYVDERAPAE+VM+F EINSVPSETKLNKM KHFGPLKESETEVD ETSRARVVFRRSSDAEVAYNSA KFNIFG V+V YQLNYTISESFKASLYAP LAEE P +AS   GDH          +LIAPSLGEEASFMVSTLG++TL IATTFHEE   IAS+ G+DTLAIPTTL DGAS +ATTMYE+TLP+ +T G  TM  ATTI D++F VATTVGEQ   V TTI EQTST A  + +E SF   TLSK TST+T TLG           ++TSS+AT   E PS+ A++GEE  +IP      TPS     GEE  +IP  L EET I P+TLAEETP+                                 IP TLGE+ P++P   S+E   +T+T  + T T+P  +  ET TVL T+ EETT            +P TL ++TPT P TLGEET + P+T  +   SIP  L EET TN  TL EET +   TL EE
Sbjct:  633 YDKIKFQKVENTGVRQESSIRDGVDVSLSASSFEPDKLVDYMKALAESPAGGGDRLDLVIVKAQLLAFYRLKGYHQLPEFQSCGGLSENEANTSHSEENMYFGEEIEHTTPMDTDAEQISTGQETSMSQRSSYLKRKHNLKDGLYPSKKERSLSELMDETFDSPDVENGTDGIANRLPSSSSGKKRKAVDSFDDSVVQEGRKTISLAKVSLTTPHFPKPSFKIGECIRRAASQMTGSPLIPKG------KLDGGSENTAADGYDVPFDNSEDAQRKRMNVTAEYSSLDELLSQLHLAACDPMKSYSSFNIFISFFSDFRDSLVVDQLPGDKAGGKRKKSPNSIIGFPETFEFEDMNDTYWTDRIVQNGSEEHPLHGNGRGQYQIVPVELEKPLQKGRKSRKRYSDVNHDLTAEKPPGYVDERAPAELVMNFSEINSVPSETKLNKMFKHFGPLKESETEVDRETSRARVVFRRSSDAEVAYNSAGKFNIFGSVAVNYQLNYTISESFKASLYAPTLAEETPLMASTLGGDHGLVASSLSETSLIAPSLGEEASFMVSTLGEDTLSIATTFHEESSMIASSLGDDTLAIPTTLGDGASIIATTMYEETLPIASTTGEGTMGVATTIGDQSFMVATTVGEQFSTVVTTISEQTSTVATPMGEEDSFITTTLSKETSTITTTLGGETSMVNVSLDEETSSMATLGEETPSILASLGEETPSIPTSLDEETPSVPTTLGEEILTIPSTLGEETPIYPVTLAEETPTITITLGQETPDLHTTLGAETPVIPSTLDKETPVIPPTLGEETPAIPPTLSDEISTITVTLGQETQTIPTIVAEETTTVLATLVEETTTIPTTLHEETLAVPTTLAEKTPTIPTTLGEETATIPTTLGKETESIPKTLGEETSTNSTTLGEETSTIPTTLAEE 1550          

HSP 2 Score: 145.591 bits (366), Expect = 3.303e-32
Identity = 130/344 (37.79%), Postives = 188/344 (54.65%), Query Frame = -1
Query:   18 TISESFKASLYAPILAEENPFIASAPCGDHALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLGDQTSSIA-TFHPEIPSVPATVGEEICTIPTPSGEETCSIPPKLDEETTIRPMTLAEETPSIPRTLGEDAPSVPAAFSEEAPAVTLTFSEGTHTLPGTLDCETKTVLTTVYEET-TIPATLGQETPTFPATLGXXXXXXXXXXXEANRSIPSNLDEETRTNPVTLAEETPSTLET 1043
            TISE  + S  A  + EE+ FI +    + + I  +LG E S +  +L +ET  +AT   E P  +AS  GE+T +IPT+L +    V TT+ E+ L + +T G ET     T+ ++T T+  T+G+++  + TT+  +T    +           TL K T  +  TLG++T +I  T   EI ++  T+G+E  TIPT   EET ++   L EETT  P TL EET ++P TL E  P++P    EE   +  T  + T ++P TL  ET T  TT+ EET TIP TL +E PT P T+ EET + P+T  E   +IP+ L  E  T   T  EE PST+ T
Sbjct: 1272 TISE--QTSTVATPMGEEDSFITTTLSKETSTITTTLGGETSMVNVSLDEETSSMATLGEETPSILASL-GEETPSIPTSLDEETPSVPTTLGEEILTIPSTLGEETPIYPVTLAEETPTITITLGQETPDLHTTLGAETPVIPS-----------TLDKETPVIPPTLGEETPAIPPTLSDEISTITVTLGQETQTIPTIVAEETTTVLATLVEETTTIPTTLHEETLAVPTTLAEKTPTIPTTLGEETATIPTTLGKETESIPKTLGEETSTNSTTLGEETSTIPTTLAEEIPTNPITVTEETSTIPTTLGEETVAIPTTLGLEASTVLTTTGEE-PSTVST 1600          

HSP 3 Score: 115.931 bits (289), Expect = 5.745e-23
Identity = 102/284 (35.92%), Postives = 140/284 (49.30%), Query Frame = -1
Query:  168 LYAPILAEENPFIASAPCGDHALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLGDQTSSIATFHPEIPSVPATVGEEICTIPTPSGEETCSIPPKLDEETTIRPMTLAEETPSIPRTLGEDAPSVPAAFSEEAPAVTLTFSEGTHTLPGTLDCETKTVLTTVYEE-TTIPATLGQET 1016
            +Y   LAEE P            I  +LG+E   + +TLG ET  I +T  +E   I  T GE+T AIP TL+D  S +  T+ ++T  + T    ET     T+V++T T+ TT+ E++L V TT+ E+T T              TL + T+T+  TLG +T SI          P T+GEE  T  T  GEET +IP  L EE    P+T+ EET +IP TLGE+  ++P                       TL  E  TVLTT  EE +T+  T+G ET
Sbjct: 1377 IYPVTLAEETP-----------TITITLGQETPDLHTTLGAETPVIPSTLDKETPVIPPTLGEETPAIPPTLSDEISTITVTLGQETQTIPTIVAEETTTVLATLVEETTTIPTTLHEETLAVPTTLAEKTPTIPT-----------TLGEETATIPTTLGKETESI----------PKTLGEETSTNSTTLGEETSTIPTTLAEEIPTNPITVTEETSTIPTTLGEETVAIPT----------------------TLGLEASTVLTTTGEEPSTVSTTMGMET 1606          

HSP 4 Score: 89.3521 bits (220), Expect = 7.177e-15
Identity = 76/203 (37.44%), Postives = 109/203 (53.69%), Query Frame = -1
Query:  402 PILAEENPFIASAPCGDHALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLGDQTSSI-ATFHPEIPSVPATVGEEICTIPTPSGEETCSIPPKLDE 1007
            P L EE P            I P+L +E S +  TLG ET  I T   EE   + +T  E+T  IPTTL +    V TT+ EKT  + TT G ET    TT+  +T ++  T+GE++    TT+ E+TST   +L +E   + +T+++ TST+  TLG++T +I  T   E  +V  T GEE  T+ T  G ET  +PP + E
Sbjct: 1424 PTLGEETP-----------AIPPTLSDEISTITVTLGQETQTIPTIVAEETTTVLATLVEETTTIPTTLHEETLAVPTTLAEKTPTIPTTLGEETATIPTTLGKETESIPKTLGEETSTNSTTLGEETSTIPTTLAEEIPTNPITVTEETSTIPTTLGEETVAIPTTLGLEASTVLTTTGEEPSTVSTTMGMET--LPPAVAE 1613          
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A061FMG8_THECC (Tudor/PWWP/MBT superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_043070 PE=4 SV=1)

HSP 1 Score: 950.273 bits (2455), Expect = 0.000e+0
Identity = 505/708 (71.33%), Postives = 555/708 (78.39%), Query Frame = -1
Query:  453 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQ-------------FSEEKTL--EVVECATPMDTDGEQKSEASKT----RRSYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEENPFIASAPCGDH----------ALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLGDQTSSIATFHPEIPSVPATVGEEICTI 2480
            YDKIKFQKVEN GVR+ESS+RDG+DVSLS SSFEPDKL+DYMK LAESP  GGDR+DLVI KAQLLAFYRLKGYHQLPE Q              SEE     E +E  TPMDTD EQ S   +T    R SYLKRKHNLKDGLYPSKKERSLSELM ETFDSPD E G+D + N+ PSSS GKKRKA+DS +DSV+QEGRKT    K SL+TPHFPKPSFKIGE I RAASQMTGSP I K       KLDGG E +A  GYDVP DN EDA+RKR ++  EYSSLDELL QLHLAACDPMK YSS NI ISFFSDFRDS+V+D+L  DKA G+RKKSPNSIIGF ETFEFEDM+DTYWT+RIVQNGSEE P  G  RGQYQ VPVEL+KP+QK RKSRKRYSD +HDLTA+KPPGYVDERAPAE+VM+F EINSVPSETKLNKM KHFGPLKESETEVD ETSRARVVFRRSSDAEVAYNSA KFNIFG V+V YQLNYTISESFKASLYAP LAEE P +AS   GDH          +LIAPSLGEEASFMVSTLG++TL IATTFHEE   IAS+ G+DTLAIPTTL DGAS +ATTMYE+TLP+ +T G  TM  ATTI D++F VATTVGEQ   V TTI EQTST A  + +E SF   TLSK TST+T TLG +TS +     E  S  AT+GEE  +I
Sbjct:  633 YDKIKFQKVENTGVRQESSIRDGVDVSLSASSFEPDKLVDYMKALAESPAGGGDRLDLVIVKAQLLAFYRLKGYHQLPEFQSCGGLSENEANTSHSEENMYFGEEIEHTTPMDTDAEQISTGQETSMSQRSSYLKRKHNLKDGLYPSKKERSLSELMDETFDSPDVENGTDGIANRLPSSSSGKKRKAVDSFDDSVVQEGRKTISLAKVSLTTPHFPKPSFKIGECIRRAASQMTGSPLIPKG------KLDGGSENTAADGYDVPFDNSEDAQRKRMNVTAEYSSLDELLSQLHLAACDPMKSYSSFNIFISFFSDFRDSLVVDQLPGDKAGGKRKKSPNSIIGFPETFEFEDMNDTYWTDRIVQNGSEEHPLHGNGRGQYQIVPVELEKPLQKGRKSRKRYSDVNHDLTAEKPPGYVDERAPAELVMNFSEINSVPSETKLNKMFKHFGPLKESETEVDRETSRARVVFRRSSDAEVAYNSAGKFNIFGSVAVNYQLNYTISESFKASLYAPTLAEETPLMASTLGGDHGLVASSLSETSLIAPSLGEEASFMVSTLGEDTLSIATTFHEESSMIASSLGDDTLAIPTTLGDGASIIATTMYEETLPIASTTGEGTMGVATTIGDQSFMVATTVGEQFSTVVTTISEQTSTVATPMGEEDSFITTTLSKETSTITTTLGGETSMVNVSLDEETSSMATLGEETPSI 1334          

HSP 2 Score: 73.559 bits (179), Expect = 5.795e-10
Identity = 64/199 (32.16%), Postives = 106/199 (53.27%), Query Frame = -1
Query:    3 EASFSHLTLSKRTSTLTATLGDQTSSIATFHPEIPSVPATVGEEICTIPTPSGEETCSIPPKLDEETTIRPMTLAEETPSIPRTLGEDAPSVPAAFSEEAPAVTLTFSEGTHTLPGTLDCETKTVLTTVYEE-TTIPATLGQETPTFPATLGXXXXXXXXXXXEANRSIPSNLDEETRTNPVTLAEETPSTLETLGEES 596
            +AS    TL++ T  + +TLG     +A+   E   +  ++GEE   + +  GE+T SI     EE+++   +L ++T +IP TLG+ A  +     EE   +  T  EGT  +  T+  ++  V TTV E+ +T+  T+ ++T T    +GEE     +T S+   +I + L  ET    V+L EET S++ TLGEE+
Sbjct: 1134 KASLYAPTLAEETPLMASTLGGDHGLVASSLSETSLIAPSLGEEASFMVSTLGEDTLSIATTFHEESSMIASSLGDDTLAIPTTLGDGASIIATTMYEETLPIASTTGEGTMGVATTIGDQSFMVATTVGEQFSTVVTTISEQTSTVATPMGEEDSFITTTLSKETSTITTTLGGETSMVNVSLDEET-SSMATLGEET 1331          
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A061DWP7_THECC (Tudor/PWWP/MBT superfamily protein OS=Theobroma cacao GN=TCM_006205 PE=4 SV=1)

HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0
Identity = 335/507 (66.07%), Postives = 372/507 (73.37%), Query Frame = -1
Query: 1026 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQF-------------SEEKTL--EVVECATPMDTDGEQKS---EASKTRRSY-LKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESF 2480
            YD I FQKVEN G ++ESS+RDG+DVSLS SSFEPDKL+DYMK LAESP +GG                    YHQ PE QF             SEE     E +E  TPMDT  EQ S   E SK++RS+ LKRKHNL+DGLYPSK ER+LSELM ETF  PD E G+D + N+ PSSS GKKRKA+DS +DSV+ EGRKT    K S +T H PKPSFKIGE I RA S MTGSP I K       KLDGG E  A  GYDVP DN EDA+RKR ++ TEYSSLDELL QLHLAA +P+  YSS N  ISFFSDFRDS+V+D+L  DKA G+RKKSPNSI G   TFEFEDM+DTYWT+RIVQN SEE P  G  RGQYQ VPVE+ KP+QK RKSRKRYSD +HDLTA+KPPG VDERAPAE+VM+F EI SVPSETKLNKM KHFGPLKESETEVD ET  ARVVFRRSSDAEVAYNSA KFNIFG V+V YQL YTISESF
Sbjct:  231 YDNITFQKVENTGFQQESSIRDGVDVSLSASSFEPDKLVDYMKALAESPSAGG--------------------YHQPPEFQFCGGLNENEANTAHSEENMYFGEEIEHTTPMDTVAEQISTGQETSKSQRSFFLKRKHNLRDGLYPSKMERTLSELMGETFYCPDIENGTDGIANRLPSSSSGKKRKAVDSFDDSVVLEGRKTISLAKVSSTTSHSPKPSFKIGECIRRATSPMTGSPLIPKG------KLDGGSENPAADGYDVPFDNSEDAQRKRMNVTTEYSSLDELLPQLHLAASEPITSYSSFNNFISFFSDFRDSLVVDQLPGDKAGGKRKKSPNSIFGPPGTFEFEDMNDTYWTDRIVQNRSEEHPLHGNGRGQYQIVPVEVKKPLQKGRKSRKRYSDVNHDLTAEKPPGCVDERAPAELVMNFSEITSVPSETKLNKMFKHFGPLKESETEVDRETCCARVVFRRSSDAEVAYNSAGKFNIFGSVAVNYQLTYTISESF 711          
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A067E143_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0465681mg PE=4 SV=1)

HSP 1 Score: 519.235 bits (1336), Expect = 4.819e-162
Identity = 300/524 (57.25%), Postives = 369/524 (70.42%), Query Frame = -1
Query:  990 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQFSEEKTLEVVECA--------TPMDTDGEQKSEASKTRRSYLKRKHNLKDGLYPSKKERSLSELMSETFDS-PDGEIGSD-VMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQP------------SVGTDRGQYQFVPVELDKPIQKVRKS--RKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEE 2480
            YDKI+ Q VENAG+R+ESS R+G+D   S  SF+PDKL+++MK  A SP  G DR++LVIAK+QLL+FYR KGY +LPE QF      + V+ +        TP+  D E     ++ R S+ KRKHNLKD +YPSKKE+SLSELM+ +FDS  D E  SD   G K  S S  KKRK +D + D   Q+GRKT    K S+ST + PKPSFKIGE I R ASQMTGS S+LKS  +RL KLD         G D   +N EDAE KR  + T+YSSLD+LL QLH AA DPM+GYS LN+IISFFSDFR+SI+ DR + DK  G+RKKS + I+G  ETFEFEDMSDTYWT+R++QNG+EEQP            S  T R  YQ VPVEL KP+QK R+S  RK+YSD +HDLT  KPPGYVDE APAE++++F E++++PSET L+KM + FGPLKESETEVD E+SRARVVF++ SDAEVA++SA KFNIFGP  V YQL+YTISE FKA      L E+
Sbjct:  856 YDKIRLQIVENAGIRQESSEREGVDKCASAQSFQPDKLVEFMKAFALSPSGGADRLELVIAKSQLLSFYRFKGYSELPEFQFCGGLAEDGVDTSHFAEKMHTTPVSMDDEHIYSETQ-RSSHHKRKHNLKDSMYPSKKEKSLSELMTGSFDSLDDDEFDSDGKAGGKLVSPSSIKKRKVVDFAGDDSSQDGRKTISLAKVSISTANIPKPSFKIGECIRRVASQMTGSSSVLKSNSERLQKLDAD-------GSDDSFENFEDAEGKRMILPTDYSSLDDLLSQLHSAAKDPMRGYSFLNMIISFFSDFRNSIISDRRAIDKVGGKRKKS-SQIMGSPETFEFEDMSDTYWTDRVIQNGAEEQPSAPAAPAGPAATSGNTQR--YQVVPVEL-KPVQKSRRSYSRKQYSDANHDLTPPKPPGYVDENAPAELIINFSEMDTIPSETNLSKMFRCFGPLKESETEVDRESSRARVVFKKCSDAEVAHSSATKFNIFGPKVVNYQLSYTISEQFKALPIGASLGED 1367          
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: V4TI87_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030525mg PE=4 SV=1)

HSP 1 Score: 518.079 bits (1333), Expect = 1.242e-161
Identity = 300/524 (57.25%), Postives = 368/524 (70.23%), Query Frame = -1
Query:  990 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQFSEEKTLEVVECA--------TPMDTDGEQKSEASKTRRSYLKRKHNLKDGLYPSKKERSLSELMSETFDS-PDGEIGSD-VMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQP------------SVGTDRGQYQFVPVELDKPIQKVRKS--RKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEE 2480
            YDKI+ Q VENAG+R+ESS R+G+D   S  SF+PDKL+++MK  A SP  G DR++LVIAKAQLL+FY  KGY +LPE QF      + V+ +        TP+  D E     ++ R S+ KRKHNLKD +YPSKKE+SLSELM+ +FDS  D E  SD   G K  S S  KKRK +D + D   Q+GRKT    K S+ST + PKPSFKIGE I R ASQMTGS S+LKS  +RL KLD         G D   +N EDAE KR  + T+YSSLD+LL QLH AA DPM+GYS LN+IISFFSDFR+SI+ DR + DK  G+RKKS + I+G  ETFEFEDMSDTYWT+R++QNG+EEQP            S  T R  YQ VPVEL KP+QK R+S  RK+YSD +HDLT  KPPGYVDE APAE++++F E++++PSET L+KM + FGPLKESETEVD E+SRARVVF++ SDAEVA++SA KFNIFGP  V YQL+YTISE FKA      L E+
Sbjct:  858 YDKIRLQIVENAGIRQESSEREGVDKCASAQSFQPDKLVEFMKAFALSPSGGADRLELVIAKAQLLSFYHFKGYSELPEFQFCGGLAEDGVDTSHFAEKMHTTPVSMDDEHIYSETQ-RSSHHKRKHNLKDSMYPSKKEKSLSELMTGSFDSLDDDEFDSDGKAGGKLVSPSSIKKRKVVDFAGDDSSQDGRKTISLAKVSISTANIPKPSFKIGECIRRVASQMTGSSSVLKSNSERLQKLDAD-------GSDDSFENFEDAEGKRMILPTDYSSLDDLLSQLHSAAKDPMRGYSFLNMIISFFSDFRNSIISDRRAIDKVGGKRKKS-SQIMGSPETFEFEDMSDTYWTDRVIQNGAEEQPSAPAAPAGPAATSGNTQR--YQVVPVEL-KPVQKSRRSYSRKQYSDANHDLTPPKPPGYVDENAPAELIINFSEMDTIPSETNLSKMFRCFGPLKESETEVDRESSRARVVFKKCSDAEVAHSSATKFNIFGPKVVNYQLSYTISEQFKALPIGASLGED 1369          
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: V4VB00_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030525mg PE=4 SV=1)

HSP 1 Score: 518.85 bits (1335), Expect = 1.585e-161
Identity = 300/524 (57.25%), Postives = 368/524 (70.23%), Query Frame = -1
Query:  990 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQFSEEKTLEVVECA--------TPMDTDGEQKSEASKTRRSYLKRKHNLKDGLYPSKKERSLSELMSETFDS-PDGEIGSD-VMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQP------------SVGTDRGQYQFVPVELDKPIQKVRKS--RKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEE 2480
            YDKI+ Q VENAG+R+ESS R+G+D   S  SF+PDKL+++MK  A SP  G DR++LVIAKAQLL+FY  KGY +LPE QF      + V+ +        TP+  D E     ++ R S+ KRKHNLKD +YPSKKE+SLSELM+ +FDS  D E  SD   G K  S S  KKRK +D + D   Q+GRKT    K S+ST + PKPSFKIGE I R ASQMTGS S+LKS  +RL KLD         G D   +N EDAE KR  + T+YSSLD+LL QLH AA DPM+GYS LN+IISFFSDFR+SI+ DR + DK  G+RKKS + I+G  ETFEFEDMSDTYWT+R++QNG+EEQP            S  T R  YQ VPVEL KP+QK R+S  RK+YSD +HDLT  KPPGYVDE APAE++++F E++++PSET L+KM + FGPLKESETEVD E+SRARVVF++ SDAEVA++SA KFNIFGP  V YQL+YTISE FKA      L E+
Sbjct:  895 YDKIRLQIVENAGIRQESSEREGVDKCASAQSFQPDKLVEFMKAFALSPSGGADRLELVIAKAQLLSFYHFKGYSELPEFQFCGGLAEDGVDTSHFAEKMHTTPVSMDDEHIYSETQ-RSSHHKRKHNLKDSMYPSKKEKSLSELMTGSFDSLDDDEFDSDGKAGGKLVSPSSIKKRKVVDFAGDDSSQDGRKTISLAKVSISTANIPKPSFKIGECIRRVASQMTGSSSVLKSNSERLQKLDAD-------GSDDSFENFEDAEGKRMILPTDYSSLDDLLSQLHSAAKDPMRGYSFLNMIISFFSDFRNSIISDRRAIDKVGGKRKKS-SQIMGSPETFEFEDMSDTYWTDRVIQNGAEEQPSAPAAPAGPAATSGNTQR--YQVVPVEL-KPVQKSRRSYSRKQYSDANHDLTPPKPPGYVDENAPAELIINFSEMDTIPSETNLSKMFRCFGPLKESETEVDRESSRARVVFKKCSDAEVAHSSATKFNIFGPKVVNYQLSYTISEQFKALPIGASLGED 1406          
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: B9SD36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1068550 PE=4 SV=1)

HSP 1 Score: 506.138 bits (1302), Expect = 1.164e-155
Identity = 289/515 (56.12%), Postives = 355/515 (68.93%), Query Frame = -1
Query:  987 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQF-----SEEKTL----EVVECATPMDTDGEQKSEASK----TRRSYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVM-GNKPPSSSFGKKRKAIDS-SEDSVMQEGRKTTK-GSLSTP-HFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEEN 2480
            YDKIKFQ VENAG+R+ESS+RD +D SL    F PDKL++YMK L +SP  G DR++LVIAK+QLL+FYRLKGY QLPE QF         TL    EV E A+ +  D  Q S   +     R SY KRKHNLKD +YP KKERSLSELM +++DS D EIG+D    NK  S S GKKR+  DS ++D+ M EGRKT     +STP   PKPSFKIGE I R ASQMTGSPSIL+       K DGG +     G D+ + + ED E +R ++ TEYSSLDELL QL LAA DP+KGYS L +IISFFSDFR+++++++   DK  G+R+ +  SI G  ETFEFEDM+DTYWT+R++ NGSEEQP   + +     V V LDKP+ +   SRKRYSD +  L+++KP GY DE APAE+VM FP ++SVPSET LNKM + FGPLKE ETE D +T+RARVVF++ SDAE AY SA KFNIFG   V YQLNYTIS  FK    A +  EE+
Sbjct: 1041 YDKIKFQIVENAGIRQESSVRDSVDESLHADVFGPDKLVEYMKALGQSPAGGADRLELVIAKSQLLSFYRLKGYSQLPEFQFCGGLLENADTLPVEDEVTEGASALYKDDGQSSSGQEILQTQRSSYHKRKHNLKDTIYPRKKERSLSELMDDSWDSVDDEIGADGKPSNKLLSPSSGKKRRGSDSFADDAAMIEGRKTISLAKVSTPVTLPKPSFKIGECIRRVASQMTGSPSILRPNS---QKPDGGSDGLVGDGSDILIQHSEDLEMRRMNVPTEYSSLDELLSQLLLAARDPLKGYSFLTVIISFFSDFRNTVIMEK-HHDKVGGKRRPALPSISGSPETFEFEDMNDTYWTDRVIHNGSEEQPPRKSRKRDTHLVSVNLDKPLNR-SNSRKRYSDGNGGLSSEKPVGYSDENAPAELVMHFPVVDSVPSETSLNKMFRRFGPLKEYETETDKDTNRARVVFKKCSDAEAAYGSAPKFNIFGSTLVNYQLNYTISVPFKTQPVATLPGEED 1550          
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: B9HLY9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04420g PE=4 SV=2)

HSP 1 Score: 499.59 bits (1285), Expect = 1.211e-154
Identity = 291/515 (56.50%), Postives = 360/515 (69.90%), Query Frame = -1
Query:  987 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQF-----SEEKTL----EVVECATPMDTDGEQKSEASKT----RRSYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSD-VMGNKPPSSSFGKKRKAIDS-SEDSVMQEGRKTTKGSL--STPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEEN 2480
            YD+IKFQ +E+AG+R E+S RDG+D   S   F+PDKL+ YMK LA++P  G +R++LVIAK+QLLAFYRLKGY +LPE QF         TL    EV++ A  +  D  Q S   +     RRS  K KHNLKD + P KKER+LS+LM +++DS D EI SD    NK  S S GKKRK  D+ ++D+ M EGRKT   +   ST   PKPSFKIGE I R ASQMTGSPSILK       K++G  +     G D    + EDAE K+  + +EYSSLDELL QLHL A DP KG+  LNIIISFFSDFR+S+V+D+   DK VG ++K+ +S +GF ETFEFEDM+DTYWT+R++QNGSEEQP   + +    FVPV LDKP  +   SRKRYSD+S+D++ QKP GYVDE+APAE+VM FP ++SVPSE  LNKM + FGPLKESETEVD +T+RARV+F+R SDAE AY SA KFNIFGP+ V YQLNYTIS  FK     PIL EE+
Sbjct:  848 YDEIKFQVLESAGIRPEASTRDGVDKDTSADLFQPDKLVGYMKALAQTPAGGANRLELVIAKSQLLAFYRLKGYSELPEYQFYGGLLENSDTLRFEDEVIDHAPAVYEDHGQISSGEEILQTQRRSSRKCKHNLKDCISPRKKERNLSDLMGDSWDSLDDEIASDGKANNKLVSPSSGKKRKGADTFADDASMTEGRKTISFAKVSSTTTLPKPSFKIGECIQRVASQMTGSPSILKCNS---QKVEGSSDGLIGDGSDTSSVHPEDAEIKKMIVPSEYSSLDELLSQLHLTAQDPSKGFGFLNIIISFFSDFRNSVVMDQ--HDK-VGGKRKTSHSSVGFPETFEFEDMNDTYWTDRVIQNGSEEQPPRKSRKRDNLFVPVVLDKPSGR-SNSRKRYSDSSYDVSTQKPVGYVDEKAPAELVMHFPVVDSVPSEISLNKMFRRFGPLKESETEVDRDTNRARVIFKRCSDAEAAYGSAPKFNIFGPILVNYQLNYTISVPFKTP--PPILDEED 1353          
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A067KMD0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08407 PE=4 SV=1)

HSP 1 Score: 501.13 bits (1289), Expect = 1.859e-153
Identity = 288/503 (57.26%), Postives = 341/503 (67.79%), Query Frame = -1
Query: 1020 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQF---------SEEKTLEVVECATPMDTDGEQKS--EASKTRRS-YLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFS-ETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKA 2480
            YDKIK Q VENAG+REESS R G+D S   + FEP KL++YMK LA+SP  G D+++LVI K+QLLAFYRLKGY QL E QF         S     EVV  +     DG+  S  E  +T+RS Y KRKHNLKD + P KKERS+SELM E++DS D E+GSD   N    S  GKKRK  DS  D    EGRKT    K S + P  PKPSFKIGE I R ASQMTGSPSILK+      K +G  +     G DV   N EDAE +R  + TEYSSLDELL QL  AA DP+   SS  II+SFFSDFR+S+++++   DK  G+R+ S    +G S ETFEFEDM DTYWT+R++QNGSEEQPS  + +    FVPVELDKP  K   SRKRYSD +    A+KP G VDE+APAE+VM FP ++SVPSE  LNKM + FGPLKESETEVD +T+RARVVF+R SDAE AY SA KFNIFG + V YQLNYTIS  FK+
Sbjct: 1103 YDKIKLQMVENAGIREESSKRYGVDKSFHANLFEPGKLLEYMKALAQSPAGGADKLELVITKSQLLAFYRLKGYSQLSEFQFCGGLLENADSLHFADEVVHASPVCGDDGQISSSQEVLQTQRSSYNKRKHNLKDTILPRKKERSMSELMDESWDSIDDELGSDEKANNKLVSPSGKKRKGSDSFADDSAMEGRKTISLAKVSTTAPPVPKPSFKIGECIRRVASQMTGSPSILKANS---QKQEGSSDGLVGDGSDVSFQNNEDAEMRRMTVPTEYSSLDELLSQLTTAARDPLTRCSSSTIIVSFFSDFRNSVIMEQ--HDKVGGKRRHS----VGASPETFEFEDMGDTYWTDRVIQNGSEEQPSRKSRKRDNLFVPVELDKPANK-SNSRKRYSDVNCGQAAEKPAGSVDEKAPAELVMHFPVVDSVPSEISLNKMFRRFGPLKESETEVDKDTNRARVVFKRCSDAEAAYGSAPKFNIFGSMLVNYQLNYTISVPFKS 1595          
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: B9HU16_POPTR (Dentin sialophosphoprotein OS=Populus trichocarpa GN=POPTR_0010s22390g PE=4 SV=2)

HSP 1 Score: 491.115 bits (1263), Expect = 3.436e-151
Identity = 282/500 (56.40%), Postives = 352/500 (70.40%), Query Frame = -1
Query: 1023 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQFSE---EKTLEV------VECATPMDTDGEQKS---EASKTRR-SYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDS-SEDSVMQEGRKTTKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFK 2480
            YD+IK Q VEN G+R E+S RDG+D  +S   F+PDKL+DYMK LA+SP  G +R++ VIAK+QLLAFYRLKGY +LPE QF     EK+  +      ++  + +  D  Q S   E  +T+R S  KRKHNLKD +YP KKER+LS+L+S+++DS   EIGSD   N    S  GKKRK  D+ ++D+ M   RKT   +  +    KPSFKIGE I R ASQMTGSPSILK       K+DG  +     G D    + EDAE KR  + TEYSSLD+LL QLHL A DP+KGY  LNIIISFFSDFR+S+V+D+   DK  G+RK S +S  GF ETFEFEDM+DTYWT+R++QNGSEEQP   + +    FVPV LDKP  +   SRK+YSD+++D++AQKP GYVDE+APAE+VM FP ++SVPSE  LNKM + FGPLKESETEVD +T+RARV+F+R SDAE AY SA KFNIFGP+ V YQLNY+IS  FK
Sbjct:  895 YDEIKCQVVENTGIRPEASTRDGVDKDMSADLFQPDKLVDYMKALAQSPSGGANRLEFVIAKSQLLAFYRLKGYSELPEYQFCGGLLEKSDALQFEDGSIDHTSAVYEDHGQISSGEEILQTQRGSSHKRKHNLKDSIYPRKKERNLSDLISDSWDSVGDEIGSDGKANSMLVSPSGKKRKGSDTFADDAYMTGRRKTISFAKVSSTALKPSFKIGECIQRVASQMTGSPSILKCNS---PKVDGSSDGLVGDGSDASFLHSEDAEIKRIIVPTEYSSLDDLLSQLHLTAQDPLKGYGFLNIIISFFSDFRNSVVMDQ--HDKVSGKRKTS-HSSGGFPETFEFEDMNDTYWTDRVIQNGSEEQPPRKSRKRDNLFVPVVLDKPSGR-SNSRKQYSDSNYDVSAQKPAGYVDEKAPAELVMHFPVVDSVPSEISLNKMFRRFGPLKESETEVDRDTNRARVIFKRCSDAEAAYGSAPKFNIFGPILVNYQLNYSISVPFK 1387          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061FUN6_THECC3.303e-3263.64Tudor/PWWP/MBT superfamily protein isoform 1 OS=Th... [more]
A0A061FMG8_THECC5.795e-1071.33Tudor/PWWP/MBT superfamily protein isoform 3 OS=Th... [more]
A0A061DWP7_THECC0.000e+066.07Tudor/PWWP/MBT superfamily protein OS=Theobroma ca... [more]
A0A067E143_CITSI4.819e-16257.25Uncharacterized protein (Fragment) OS=Citrus sinen... [more]
V4TI87_9ROSI1.242e-16157.25Uncharacterized protein OS=Citrus clementina GN=CI... [more]
V4VB00_9ROSI1.585e-16157.25Uncharacterized protein OS=Citrus clementina GN=CI... [more]
B9SD36_RICCO1.164e-15556.12Putative uncharacterized protein OS=Ricinus commun... [more]
B9HLY9_POPTR1.211e-15456.50Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A067KMD0_JATCU1.859e-15357.26Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
B9HU16_POPTR3.436e-15156.40Dentin sialophosphoprotein OS=Populus trichocarpa ... [more]

Pages

back to top
Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0098079 ID=g.barbadense_cottongen_reftransV1_0098079; Name=g.barbadense_cottongen_reftransV1_0098079; organism=Gossypium barbadense; type=contig; length=2480bp
GGACTTTCTTCACCCAAGGTTTCCAGAGTACTGGGGGTTTCCTCTGCCAA
GGTCACTGGATTGGTACGAGTTTCTTCGTCCAGGTTAGAGGGAATGCTTC
GATTTGCTTCGCTTGAGGTTGAGGGAGTGCTACAAGTTTCTTCACCCAAG
GTTGCAGGAAAGGTAGGAGTTTCTTGACCTAAGGTTGCAGGAATGGTTGT
TTCCTCATAAACAGTTGTAAGAACGGTCTTAGTTTCACAATCCAATGTTC
CAGGAAGGGTATGAGTTCCTTCGCTGAAAGTCAGAGTAACTGCTGGAGCT
TCTTCACTAAAGGCTGCAGGGACAGACGGAGCATCTTCGCCCAAGGTTCT
GGGAATGCTAGGGGTTTCCTCTGCCAAGGTCATTGGACGGATAGTAGTTT
CTTCATCCAACTTTGGAGGAATGCTACAAGTTTCTTCACCCGAGGGTGTG
GGAATGGTACAGATTTCTTCACCCACAGTGGCAGGAACACTAGGAATTTC
TGGATGGAAGGTAGCAATGCTTGAAGTTTGATCACCCAAGGTTGCGGTCA
GAGTCGAAGTTCTTTTGCTCAAAGTTAAATGGGAAAATGAAGCTTCGTCA
ACCAAGCTTGCAGCAGCAGTTGACGTTTGCTCATCAATGGTTGTGAAAAC
AGGCAAAGATTGTTCGCCTACAGTTGTGGCAACAGTAAAGGTTTTGTCAA
CAATAGTTGTAGCACCAGCCATTGTTTCCACACCTGCAGTCGTTGTAACA
GGCAATGTTTTCTCATACATGGTTGTAGCAACATCCGAAGCTCCATCTGC
TAAGGTCGTGGGAATGGCCAAAGTATCCTCACCTGTAGTTGAGGCTATGA
ACCAAGGCTCCTCATGGAATGTAGTAGCAATGGGTAAAGTTTCATCACCA
AGGGTTGAAACCATGAATGAAGCTTCCTCACCTAGGCTTGGGGCAATAAG
TGCATGGTCCCCACAAGGGGCTGAAGCAATGAATGGATTCTCCTCAGCTA
GGATTGGAGCATACAATGAAGCTTTGAATGATTCCGAAATAGTGTAGTTG
AGTTGATAAGTTACAGACACCGGCCCAAAGATGTTGAATTTCCTGGCACT
ATTGTAAGCAACTTCTGCATCGGATGATCTTCTAAAAACAACTCTGGCAC
GGCTGGTTTCGCAATCAACTTCTGTCTCGGATTCCTTTAATGGTCCAAAG
TGCTTCAACATCTTATTTAGCTTTGTTTCTGAAGGAACAGAATTGATCTC
AGGAAAGCTCATAACAATTTCTGCTGGGGCCCTCTCATCAACGTAGCCAG
GGGGTTTCTGTGCTGTCAAATCATGACTGGTATCAGAATACCGCTTTCGA
GACTTACGGACTTTTTGAATGGGTTTATCTAATTCAACAGGCACAAATTG
ATATTGTCCCCTATCAGTACCAACTGATGGCTGCTCCTCGGAACCATTTT
GGACTATTCTGTTAGTCCAATAAGTGTCACTCATGTCCTCAAACTCAAAA
GTTTCTGAAAAACCAATGATAGAATTTGGTGACTTCTTCCTTTGGCCAAC
TGCTTTGTCCCTGGAAAGTCGATCCAGAACTATCGAATCTCTGAAATCTG
AGAAGAAGCTAATAATAATATTAAGAGAACTGTAACCTTTCATCGGATCA
CATGCTGCCAAGTGAAGTTGCAACAACAACTCGTCAAGTGATGAATATTC
AGTCAAAATATCTGTCCTCTTTCGCTCGGCATCCTCAAGATTATCAACGG
GAACATCATATCCACATGTAGCAGAAGTTTCACAGCCACCATCAAGCTTG
TGTAACCTATCACCACCGGACTTTAGAATCGATGGGGATCCGGTCATTTG
GCTTGCAGCTCTACTGATACGCTCACCAATCTTAAAGGAAGGCTTTGGGA
AATGAGGTGTGCTTAGAGACCCTTTAGTTGTCTTCCTCCCTTCCTGCATC
ACGGAGTCTTCCGAGGAATCAATGGCTTTTCTTTTCTTGCCAAATGATGA
TGAAGGGGGCTTATTACCCATCACATCAGACCCGATTTCACCATCAGGAG
AATCAAATGTCTCACTCATTAATTCGGACAAGCTTCTCTCCTTTTTACTA
GGATACAATCCATCCTTCAGATTATGCTTCCGTTTAAGGTAAGATCTCCG
AGTCTTCGAAGCCTCAGATTTTTGCTCACCATCCGTATCCATAGGAGTGG
CACACTCAACTACCTCAAGCGTTTTCTCCTCAGAAAATTGGGATTCAGGC
AGCTGATGATAACCTTTTAAACGATAGAATGCCAACAATTGAGCTTTAGC
AATCACAAGGTCGATTCGATCACCCCCACTGTATGGAGACTCCGCTAATT
CTTTCATATAGTCAATTAATTTGTCAGGCTCAAAAGAACTAGGACTTAAA
GATACATCAATACCATCTCTTAAACTTGATTCTTCCCGAACTCCCGCATT
CTCAACCTTTTGGAATTTTATCTTGTCATA
back to top