g.barbadense_cottongen_reftransV1_0098079, g.barbadense_cottongen_reftransV1_0098079 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A061FUN6_THECC (Tudor/PWWP/MBT superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_043070 PE=4 SV=1) HSP 1 Score: 1044.26 bits (2699), Expect = 0.000e+0 Identity = 588/924 (63.64%), Postives = 661/924 (71.54%), Query Frame = -1 Query: 6 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQ-------------FSEEKTL--EVVECATPMDTDGEQKSEASKT----RRSYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEENPFIASAPCGDH----------ALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLG-----------DQTSSIATFHPEIPSVPATVGEEICTIP------TPS-----GEETCSIPPKLDEETTIRPMTLAEETPS---------------------------------IPRTLGEDAPSVPAAFSEEAPAVTLTFSEGTHTLPGTLDCETKTVLTTVYEETT------------IPATLGQETPTFPATLGXXXXXXXXXXXEANRSIPSNLDEETRTNPVTLAEETPSTLETLGEE 2480 YDKIKFQKVEN GVR+ESS+RDG+DVSLS SSFEPDKL+DYMK LAESP GGDR+DLVI KAQLLAFYRLKGYHQLPE Q SEE E +E TPMDTD EQ S +T R SYLKRKHNLKDGLYPSKKERSLSELM ETFDSPD E G+D + N+ PSSS GKKRKA+DS +DSV+QEGRKT K SL+TPHFPKPSFKIGE I RAASQMTGSP I K KLDGG E +A GYDVP DN EDA+RKR ++ EYSSLDELL QLHLAACDPMK YSS NI ISFFSDFRDS+V+D+L DKA G+RKKSPNSIIGF ETFEFEDM+DTYWT+RIVQNGSEE P G RGQYQ VPVEL+KP+QK RKSRKRYSD +HDLTA+KPPGYVDERAPAE+VM+F EINSVPSETKLNKM KHFGPLKESETEVD ETSRARVVFRRSSDAEVAYNSA KFNIFG V+V YQLNYTISESFKASLYAP LAEE P +AS GDH +LIAPSLGEEASFMVSTLG++TL IATTFHEE IAS+ G+DTLAIPTTL DGAS +ATTMYE+TLP+ +T G TM ATTI D++F VATTVGEQ V TTI EQTST A + +E SF TLSK TST+T TLG ++TSS+AT E PS+ A++GEE +IP TPS GEE +IP L EET I P+TLAEETP+ IP TLGE+ P++P S+E +T+T + T T+P + ET TVL T+ EETT +P TL ++TPT P TLGEET + P+T + SIP L EET TN TL EET + TL EE Sbjct: 633 YDKIKFQKVENTGVRQESSIRDGVDVSLSASSFEPDKLVDYMKALAESPAGGGDRLDLVIVKAQLLAFYRLKGYHQLPEFQSCGGLSENEANTSHSEENMYFGEEIEHTTPMDTDAEQISTGQETSMSQRSSYLKRKHNLKDGLYPSKKERSLSELMDETFDSPDVENGTDGIANRLPSSSSGKKRKAVDSFDDSVVQEGRKTISLAKVSLTTPHFPKPSFKIGECIRRAASQMTGSPLIPKG------KLDGGSENTAADGYDVPFDNSEDAQRKRMNVTAEYSSLDELLSQLHLAACDPMKSYSSFNIFISFFSDFRDSLVVDQLPGDKAGGKRKKSPNSIIGFPETFEFEDMNDTYWTDRIVQNGSEEHPLHGNGRGQYQIVPVELEKPLQKGRKSRKRYSDVNHDLTAEKPPGYVDERAPAELVMNFSEINSVPSETKLNKMFKHFGPLKESETEVDRETSRARVVFRRSSDAEVAYNSAGKFNIFGSVAVNYQLNYTISESFKASLYAPTLAEETPLMASTLGGDHGLVASSLSETSLIAPSLGEEASFMVSTLGEDTLSIATTFHEESSMIASSLGDDTLAIPTTLGDGASIIATTMYEETLPIASTTGEGTMGVATTIGDQSFMVATTVGEQFSTVVTTISEQTSTVATPMGEEDSFITTTLSKETSTITTTLGGETSMVNVSLDEETSSMATLGEETPSILASLGEETPSIPTSLDEETPSVPTTLGEEILTIPSTLGEETPIYPVTLAEETPTITITLGQETPDLHTTLGAETPVIPSTLDKETPVIPPTLGEETPAIPPTLSDEISTITVTLGQETQTIPTIVAEETTTVLATLVEETTTIPTTLHEETLAVPTTLAEKTPTIPTTLGEETATIPTTLGKETESIPKTLGEETSTNSTTLGEETSTIPTTLAEE 1550 HSP 2 Score: 145.591 bits (366), Expect = 3.303e-32 Identity = 130/344 (37.79%), Postives = 188/344 (54.65%), Query Frame = -1 Query: 18 TISESFKASLYAPILAEENPFIASAPCGDHALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLGDQTSSIA-TFHPEIPSVPATVGEEICTIPTPSGEETCSIPPKLDEETTIRPMTLAEETPSIPRTLGEDAPSVPAAFSEEAPAVTLTFSEGTHTLPGTLDCETKTVLTTVYEET-TIPATLGQETPTFPATLGXXXXXXXXXXXEANRSIPSNLDEETRTNPVTLAEETPSTLET 1043 TISE + S A + EE+ FI + + + I +LG E S + +L +ET +AT E P +AS GE+T +IPT+L + V TT+ E+ L + +T G ET T+ ++T T+ T+G+++ + TT+ +T + TL K T + TLG++T +I T EI ++ T+G+E TIPT EET ++ L EETT P TL EET ++P TL E P++P EE + T + T ++P TL ET T TT+ EET TIP TL +E PT P T+ EET + P+T E +IP+ L E T T EE PST+ T Sbjct: 1272 TISE--QTSTVATPMGEEDSFITTTLSKETSTITTTLGGETSMVNVSLDEETSSMATLGEETPSILASL-GEETPSIPTSLDEETPSVPTTLGEEILTIPSTLGEETPIYPVTLAEETPTITITLGQETPDLHTTLGAETPVIPS-----------TLDKETPVIPPTLGEETPAIPPTLSDEISTITVTLGQETQTIPTIVAEETTTVLATLVEETTTIPTTLHEETLAVPTTLAEKTPTIPTTLGEETATIPTTLGKETESIPKTLGEETSTNSTTLGEETSTIPTTLAEEIPTNPITVTEETSTIPTTLGEETVAIPTTLGLEASTVLTTTGEE-PSTVST 1600 HSP 3 Score: 115.931 bits (289), Expect = 5.745e-23 Identity = 102/284 (35.92%), Postives = 140/284 (49.30%), Query Frame = -1 Query: 168 LYAPILAEENPFIASAPCGDHALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLGDQTSSIATFHPEIPSVPATVGEEICTIPTPSGEETCSIPPKLDEETTIRPMTLAEETPSIPRTLGEDAPSVPAAFSEEAPAVTLTFSEGTHTLPGTLDCETKTVLTTVYEE-TTIPATLGQET 1016 +Y LAEE P I +LG+E + +TLG ET I +T +E I T GE+T AIP TL+D S + T+ ++T + T ET T+V++T T+ TT+ E++L V TT+ E+T T TL + T+T+ TLG +T SI P T+GEE T T GEET +IP L EE P+T+ EET +IP TLGE+ ++P TL E TVLTT EE +T+ T+G ET Sbjct: 1377 IYPVTLAEETP-----------TITITLGQETPDLHTTLGAETPVIPSTLDKETPVIPPTLGEETPAIPPTLSDEISTITVTLGQETQTIPTIVAEETTTVLATLVEETTTIPTTLHEETLAVPTTLAEKTPTIPT-----------TLGEETATIPTTLGKETESI----------PKTLGEETSTNSTTLGEETSTIPTTLAEEIPTNPITVTEETSTIPTTLGEETVAIPT----------------------TLGLEASTVLTTTGEEPSTVSTTMGMET 1606 HSP 4 Score: 89.3521 bits (220), Expect = 7.177e-15 Identity = 76/203 (37.44%), Postives = 109/203 (53.69%), Query Frame = -1 Query: 402 PILAEENPFIASAPCGDHALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLGDQTSSI-ATFHPEIPSVPATVGEEICTIPTPSGEETCSIPPKLDE 1007 P L EE P I P+L +E S + TLG ET I T EE + +T E+T IPTTL + V TT+ EKT + TT G ET TT+ +T ++ T+GE++ TT+ E+TST +L +E + +T+++ TST+ TLG++T +I T E +V T GEE T+ T G ET +PP + E Sbjct: 1424 PTLGEETP-----------AIPPTLSDEISTITVTLGQETQTIPTIVAEETTTVLATLVEETTTIPTTLHEETLAVPTTLAEKTPTIPTTLGEETATIPTTLGKETESIPKTLGEETSTNSTTLGEETSTIPTTLAEEIPTNPITVTEETSTIPTTLGEETVAIPTTLGLEASTVLTTTGEEPSTVSTTMGMET--LPPAVAE 1613
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A061FMG8_THECC (Tudor/PWWP/MBT superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_043070 PE=4 SV=1) HSP 1 Score: 950.273 bits (2455), Expect = 0.000e+0 Identity = 505/708 (71.33%), Postives = 555/708 (78.39%), Query Frame = -1 Query: 453 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQ-------------FSEEKTL--EVVECATPMDTDGEQKSEASKT----RRSYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEENPFIASAPCGDH----------ALIAPSLGEEASFMVSTLGDETLPIATTFHEEPWFIASTTGEDTLAIPTTLADGASDVATTMYEKTLPVTTTAGVETMAGATTIVDKTFTVATTVGEQSLPVFTTIDEQTSTAAASLVDEASFSHLTLSKRTSTLTATLGDQTSSIATFHPEIPSVPATVGEEICTI 2480 YDKIKFQKVEN GVR+ESS+RDG+DVSLS SSFEPDKL+DYMK LAESP GGDR+DLVI KAQLLAFYRLKGYHQLPE Q SEE E +E TPMDTD EQ S +T R SYLKRKHNLKDGLYPSKKERSLSELM ETFDSPD E G+D + N+ PSSS GKKRKA+DS +DSV+QEGRKT K SL+TPHFPKPSFKIGE I RAASQMTGSP I K KLDGG E +A GYDVP DN EDA+RKR ++ EYSSLDELL QLHLAACDPMK YSS NI ISFFSDFRDS+V+D+L DKA G+RKKSPNSIIGF ETFEFEDM+DTYWT+RIVQNGSEE P G RGQYQ VPVEL+KP+QK RKSRKRYSD +HDLTA+KPPGYVDERAPAE+VM+F EINSVPSETKLNKM KHFGPLKESETEVD ETSRARVVFRRSSDAEVAYNSA KFNIFG V+V YQLNYTISESFKASLYAP LAEE P +AS GDH +LIAPSLGEEASFMVSTLG++TL IATTFHEE IAS+ G+DTLAIPTTL DGAS +ATTMYE+TLP+ +T G TM ATTI D++F VATTVGEQ V TTI EQTST A + +E SF TLSK TST+T TLG +TS + E S AT+GEE +I Sbjct: 633 YDKIKFQKVENTGVRQESSIRDGVDVSLSASSFEPDKLVDYMKALAESPAGGGDRLDLVIVKAQLLAFYRLKGYHQLPEFQSCGGLSENEANTSHSEENMYFGEEIEHTTPMDTDAEQISTGQETSMSQRSSYLKRKHNLKDGLYPSKKERSLSELMDETFDSPDVENGTDGIANRLPSSSSGKKRKAVDSFDDSVVQEGRKTISLAKVSLTTPHFPKPSFKIGECIRRAASQMTGSPLIPKG------KLDGGSENTAADGYDVPFDNSEDAQRKRMNVTAEYSSLDELLSQLHLAACDPMKSYSSFNIFISFFSDFRDSLVVDQLPGDKAGGKRKKSPNSIIGFPETFEFEDMNDTYWTDRIVQNGSEEHPLHGNGRGQYQIVPVELEKPLQKGRKSRKRYSDVNHDLTAEKPPGYVDERAPAELVMNFSEINSVPSETKLNKMFKHFGPLKESETEVDRETSRARVVFRRSSDAEVAYNSAGKFNIFGSVAVNYQLNYTISESFKASLYAPTLAEETPLMASTLGGDHGLVASSLSETSLIAPSLGEEASFMVSTLGEDTLSIATTFHEESSMIASSLGDDTLAIPTTLGDGASIIATTMYEETLPIASTTGEGTMGVATTIGDQSFMVATTVGEQFSTVVTTISEQTSTVATPMGEEDSFITTTLSKETSTITTTLGGETSMVNVSLDEETSSMATLGEETPSI 1334 HSP 2 Score: 73.559 bits (179), Expect = 5.795e-10 Identity = 64/199 (32.16%), Postives = 106/199 (53.27%), Query Frame = -1 Query: 3 EASFSHLTLSKRTSTLTATLGDQTSSIATFHPEIPSVPATVGEEICTIPTPSGEETCSIPPKLDEETTIRPMTLAEETPSIPRTLGEDAPSVPAAFSEEAPAVTLTFSEGTHTLPGTLDCETKTVLTTVYEE-TTIPATLGQETPTFPATLGXXXXXXXXXXXEANRSIPSNLDEETRTNPVTLAEETPSTLETLGEES 596 +AS TL++ T + +TLG +A+ E + ++GEE + + GE+T SI EE+++ +L ++T +IP TLG+ A + EE + T EGT + T+ ++ V TTV E+ +T+ T+ ++T T +GEE +T S+ +I + L ET V+L EET S++ TLGEE+ Sbjct: 1134 KASLYAPTLAEETPLMASTLGGDHGLVASSLSETSLIAPSLGEEASFMVSTLGEDTLSIATTFHEESSMIASSLGDDTLAIPTTLGDGASIIATTMYEETLPIASTTGEGTMGVATTIGDQSFMVATTVGEQFSTVVTTISEQTSTVATPMGEEDSFITTTLSKETSTITTTLGGETSMVNVSLDEET-SSMATLGEET 1331
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A061DWP7_THECC (Tudor/PWWP/MBT superfamily protein OS=Theobroma cacao GN=TCM_006205 PE=4 SV=1) HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0 Identity = 335/507 (66.07%), Postives = 372/507 (73.37%), Query Frame = -1 Query: 1026 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQF-------------SEEKTL--EVVECATPMDTDGEQKS---EASKTRRSY-LKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESF 2480 YD I FQKVEN G ++ESS+RDG+DVSLS SSFEPDKL+DYMK LAESP +GG YHQ PE QF SEE E +E TPMDT EQ S E SK++RS+ LKRKHNL+DGLYPSK ER+LSELM ETF PD E G+D + N+ PSSS GKKRKA+DS +DSV+ EGRKT K S +T H PKPSFKIGE I RA S MTGSP I K KLDGG E A GYDVP DN EDA+RKR ++ TEYSSLDELL QLHLAA +P+ YSS N ISFFSDFRDS+V+D+L DKA G+RKKSPNSI G TFEFEDM+DTYWT+RIVQN SEE P G RGQYQ VPVE+ KP+QK RKSRKRYSD +HDLTA+KPPG VDERAPAE+VM+F EI SVPSETKLNKM KHFGPLKESETEVD ET ARVVFRRSSDAEVAYNSA KFNIFG V+V YQL YTISESF Sbjct: 231 YDNITFQKVENTGFQQESSIRDGVDVSLSASSFEPDKLVDYMKALAESPSAGG--------------------YHQPPEFQFCGGLNENEANTAHSEENMYFGEEIEHTTPMDTVAEQISTGQETSKSQRSFFLKRKHNLRDGLYPSKMERTLSELMGETFYCPDIENGTDGIANRLPSSSSGKKRKAVDSFDDSVVLEGRKTISLAKVSSTTSHSPKPSFKIGECIRRATSPMTGSPLIPKG------KLDGGSENPAADGYDVPFDNSEDAQRKRMNVTTEYSSLDELLPQLHLAASEPITSYSSFNNFISFFSDFRDSLVVDQLPGDKAGGKRKKSPNSIFGPPGTFEFEDMNDTYWTDRIVQNRSEEHPLHGNGRGQYQIVPVEVKKPLQKGRKSRKRYSDVNHDLTAEKPPGCVDERAPAELVMNFSEITSVPSETKLNKMFKHFGPLKESETEVDRETCCARVVFRRSSDAEVAYNSAGKFNIFGSVAVNYQLTYTISESF 711
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A067E143_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0465681mg PE=4 SV=1) HSP 1 Score: 519.235 bits (1336), Expect = 4.819e-162 Identity = 300/524 (57.25%), Postives = 369/524 (70.42%), Query Frame = -1 Query: 990 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQFSEEKTLEVVECA--------TPMDTDGEQKSEASKTRRSYLKRKHNLKDGLYPSKKERSLSELMSETFDS-PDGEIGSD-VMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQP------------SVGTDRGQYQFVPVELDKPIQKVRKS--RKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEE 2480 YDKI+ Q VENAG+R+ESS R+G+D S SF+PDKL+++MK A SP G DR++LVIAK+QLL+FYR KGY +LPE QF + V+ + TP+ D E ++ R S+ KRKHNLKD +YPSKKE+SLSELM+ +FDS D E SD G K S S KKRK +D + D Q+GRKT K S+ST + PKPSFKIGE I R ASQMTGS S+LKS +RL KLD G D +N EDAE KR + T+YSSLD+LL QLH AA DPM+GYS LN+IISFFSDFR+SI+ DR + DK G+RKKS + I+G ETFEFEDMSDTYWT+R++QNG+EEQP S T R YQ VPVEL KP+QK R+S RK+YSD +HDLT KPPGYVDE APAE++++F E++++PSET L+KM + FGPLKESETEVD E+SRARVVF++ SDAEVA++SA KFNIFGP V YQL+YTISE FKA L E+ Sbjct: 856 YDKIRLQIVENAGIRQESSEREGVDKCASAQSFQPDKLVEFMKAFALSPSGGADRLELVIAKSQLLSFYRFKGYSELPEFQFCGGLAEDGVDTSHFAEKMHTTPVSMDDEHIYSETQ-RSSHHKRKHNLKDSMYPSKKEKSLSELMTGSFDSLDDDEFDSDGKAGGKLVSPSSIKKRKVVDFAGDDSSQDGRKTISLAKVSISTANIPKPSFKIGECIRRVASQMTGSSSVLKSNSERLQKLDAD-------GSDDSFENFEDAEGKRMILPTDYSSLDDLLSQLHSAAKDPMRGYSFLNMIISFFSDFRNSIISDRRAIDKVGGKRKKS-SQIMGSPETFEFEDMSDTYWTDRVIQNGAEEQPSAPAAPAGPAATSGNTQR--YQVVPVEL-KPVQKSRRSYSRKQYSDANHDLTPPKPPGYVDENAPAELIINFSEMDTIPSETNLSKMFRCFGPLKESETEVDRESSRARVVFKKCSDAEVAHSSATKFNIFGPKVVNYQLSYTISEQFKALPIGASLGED 1367
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: V4TI87_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030525mg PE=4 SV=1) HSP 1 Score: 518.079 bits (1333), Expect = 1.242e-161 Identity = 300/524 (57.25%), Postives = 368/524 (70.23%), Query Frame = -1 Query: 990 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQFSEEKTLEVVECA--------TPMDTDGEQKSEASKTRRSYLKRKHNLKDGLYPSKKERSLSELMSETFDS-PDGEIGSD-VMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQP------------SVGTDRGQYQFVPVELDKPIQKVRKS--RKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEE 2480 YDKI+ Q VENAG+R+ESS R+G+D S SF+PDKL+++MK A SP G DR++LVIAKAQLL+FY KGY +LPE QF + V+ + TP+ D E ++ R S+ KRKHNLKD +YPSKKE+SLSELM+ +FDS D E SD G K S S KKRK +D + D Q+GRKT K S+ST + PKPSFKIGE I R ASQMTGS S+LKS +RL KLD G D +N EDAE KR + T+YSSLD+LL QLH AA DPM+GYS LN+IISFFSDFR+SI+ DR + DK G+RKKS + I+G ETFEFEDMSDTYWT+R++QNG+EEQP S T R YQ VPVEL KP+QK R+S RK+YSD +HDLT KPPGYVDE APAE++++F E++++PSET L+KM + FGPLKESETEVD E+SRARVVF++ SDAEVA++SA KFNIFGP V YQL+YTISE FKA L E+ Sbjct: 858 YDKIRLQIVENAGIRQESSEREGVDKCASAQSFQPDKLVEFMKAFALSPSGGADRLELVIAKAQLLSFYHFKGYSELPEFQFCGGLAEDGVDTSHFAEKMHTTPVSMDDEHIYSETQ-RSSHHKRKHNLKDSMYPSKKEKSLSELMTGSFDSLDDDEFDSDGKAGGKLVSPSSIKKRKVVDFAGDDSSQDGRKTISLAKVSISTANIPKPSFKIGECIRRVASQMTGSSSVLKSNSERLQKLDAD-------GSDDSFENFEDAEGKRMILPTDYSSLDDLLSQLHSAAKDPMRGYSFLNMIISFFSDFRNSIISDRRAIDKVGGKRKKS-SQIMGSPETFEFEDMSDTYWTDRVIQNGAEEQPSAPAAPAGPAATSGNTQR--YQVVPVEL-KPVQKSRRSYSRKQYSDANHDLTPPKPPGYVDENAPAELIINFSEMDTIPSETNLSKMFRCFGPLKESETEVDRESSRARVVFKKCSDAEVAHSSATKFNIFGPKVVNYQLSYTISEQFKALPIGASLGED 1369
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: V4VB00_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030525mg PE=4 SV=1) HSP 1 Score: 518.85 bits (1335), Expect = 1.585e-161 Identity = 300/524 (57.25%), Postives = 368/524 (70.23%), Query Frame = -1 Query: 990 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQFSEEKTLEVVECA--------TPMDTDGEQKSEASKTRRSYLKRKHNLKDGLYPSKKERSLSELMSETFDS-PDGEIGSD-VMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQP------------SVGTDRGQYQFVPVELDKPIQKVRKS--RKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEE 2480 YDKI+ Q VENAG+R+ESS R+G+D S SF+PDKL+++MK A SP G DR++LVIAKAQLL+FY KGY +LPE QF + V+ + TP+ D E ++ R S+ KRKHNLKD +YPSKKE+SLSELM+ +FDS D E SD G K S S KKRK +D + D Q+GRKT K S+ST + PKPSFKIGE I R ASQMTGS S+LKS +RL KLD G D +N EDAE KR + T+YSSLD+LL QLH AA DPM+GYS LN+IISFFSDFR+SI+ DR + DK G+RKKS + I+G ETFEFEDMSDTYWT+R++QNG+EEQP S T R YQ VPVEL KP+QK R+S RK+YSD +HDLT KPPGYVDE APAE++++F E++++PSET L+KM + FGPLKESETEVD E+SRARVVF++ SDAEVA++SA KFNIFGP V YQL+YTISE FKA L E+ Sbjct: 895 YDKIRLQIVENAGIRQESSEREGVDKCASAQSFQPDKLVEFMKAFALSPSGGADRLELVIAKAQLLSFYHFKGYSELPEFQFCGGLAEDGVDTSHFAEKMHTTPVSMDDEHIYSETQ-RSSHHKRKHNLKDSMYPSKKEKSLSELMTGSFDSLDDDEFDSDGKAGGKLVSPSSIKKRKVVDFAGDDSSQDGRKTISLAKVSISTANIPKPSFKIGECIRRVASQMTGSSSVLKSNSERLQKLDAD-------GSDDSFENFEDAEGKRMILPTDYSSLDDLLSQLHSAAKDPMRGYSFLNMIISFFSDFRNSIISDRRAIDKVGGKRKKS-SQIMGSPETFEFEDMSDTYWTDRVIQNGAEEQPSAPAAPAGPAATSGNTQR--YQVVPVEL-KPVQKSRRSYSRKQYSDANHDLTPPKPPGYVDENAPAELIINFSEMDTIPSETNLSKMFRCFGPLKESETEVDRESSRARVVFKKCSDAEVAHSSATKFNIFGPKVVNYQLSYTISEQFKALPIGASLGED 1406
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: B9SD36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1068550 PE=4 SV=1) HSP 1 Score: 506.138 bits (1302), Expect = 1.164e-155 Identity = 289/515 (56.12%), Postives = 355/515 (68.93%), Query Frame = -1 Query: 987 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQF-----SEEKTL----EVVECATPMDTDGEQKSEASK----TRRSYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVM-GNKPPSSSFGKKRKAIDS-SEDSVMQEGRKTTK-GSLSTP-HFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEEN 2480 YDKIKFQ VENAG+R+ESS+RD +D SL F PDKL++YMK L +SP G DR++LVIAK+QLL+FYRLKGY QLPE QF TL EV E A+ + D Q S + R SY KRKHNLKD +YP KKERSLSELM +++DS D EIG+D NK S S GKKR+ DS ++D+ M EGRKT +STP PKPSFKIGE I R ASQMTGSPSIL+ K DGG + G D+ + + ED E +R ++ TEYSSLDELL QL LAA DP+KGYS L +IISFFSDFR+++++++ DK G+R+ + SI G ETFEFEDM+DTYWT+R++ NGSEEQP + + V V LDKP+ + SRKRYSD + L+++KP GY DE APAE+VM FP ++SVPSET LNKM + FGPLKE ETE D +T+RARVVF++ SDAE AY SA KFNIFG V YQLNYTIS FK A + EE+ Sbjct: 1041 YDKIKFQIVENAGIRQESSVRDSVDESLHADVFGPDKLVEYMKALGQSPAGGADRLELVIAKSQLLSFYRLKGYSQLPEFQFCGGLLENADTLPVEDEVTEGASALYKDDGQSSSGQEILQTQRSSYHKRKHNLKDTIYPRKKERSLSELMDDSWDSVDDEIGADGKPSNKLLSPSSGKKRRGSDSFADDAAMIEGRKTISLAKVSTPVTLPKPSFKIGECIRRVASQMTGSPSILRPNS---QKPDGGSDGLVGDGSDILIQHSEDLEMRRMNVPTEYSSLDELLSQLLLAARDPLKGYSFLTVIISFFSDFRNTVIMEK-HHDKVGGKRRPALPSISGSPETFEFEDMNDTYWTDRVIHNGSEEQPPRKSRKRDTHLVSVNLDKPLNR-SNSRKRYSDGNGGLSSEKPVGYSDENAPAELVMHFPVVDSVPSETSLNKMFRRFGPLKEYETETDKDTNRARVVFKKCSDAEAAYGSAPKFNIFGSTLVNYQLNYTISVPFKTQPVATLPGEED 1550
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: B9HLY9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04420g PE=4 SV=2) HSP 1 Score: 499.59 bits (1285), Expect = 1.211e-154 Identity = 291/515 (56.50%), Postives = 360/515 (69.90%), Query Frame = -1 Query: 987 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQF-----SEEKTL----EVVECATPMDTDGEQKSEASKT----RRSYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSD-VMGNKPPSSSFGKKRKAIDS-SEDSVMQEGRKTTKGSL--STPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKASLYAPILAEEN 2480 YD+IKFQ +E+AG+R E+S RDG+D S F+PDKL+ YMK LA++P G +R++LVIAK+QLLAFYRLKGY +LPE QF TL EV++ A + D Q S + RRS K KHNLKD + P KKER+LS+LM +++DS D EI SD NK S S GKKRK D+ ++D+ M EGRKT + ST PKPSFKIGE I R ASQMTGSPSILK K++G + G D + EDAE K+ + +EYSSLDELL QLHL A DP KG+ LNIIISFFSDFR+S+V+D+ DK VG ++K+ +S +GF ETFEFEDM+DTYWT+R++QNGSEEQP + + FVPV LDKP + SRKRYSD+S+D++ QKP GYVDE+APAE+VM FP ++SVPSE LNKM + FGPLKESETEVD +T+RARV+F+R SDAE AY SA KFNIFGP+ V YQLNYTIS FK PIL EE+ Sbjct: 848 YDEIKFQVLESAGIRPEASTRDGVDKDTSADLFQPDKLVGYMKALAQTPAGGANRLELVIAKSQLLAFYRLKGYSELPEYQFYGGLLENSDTLRFEDEVIDHAPAVYEDHGQISSGEEILQTQRRSSRKCKHNLKDCISPRKKERNLSDLMGDSWDSLDDEIASDGKANNKLVSPSSGKKRKGADTFADDASMTEGRKTISFAKVSSTTTLPKPSFKIGECIQRVASQMTGSPSILKCNS---QKVEGSSDGLIGDGSDTSSVHPEDAEIKKMIVPSEYSSLDELLSQLHLTAQDPSKGFGFLNIIISFFSDFRNSVVMDQ--HDK-VGGKRKTSHSSVGFPETFEFEDMNDTYWTDRVIQNGSEEQPPRKSRKRDNLFVPVVLDKPSGR-SNSRKRYSDSSYDVSTQKPVGYVDEKAPAELVMHFPVVDSVPSEISLNKMFRRFGPLKESETEVDRDTNRARVIFKRCSDAEAAYGSAPKFNIFGPILVNYQLNYTISVPFKTP--PPILDEED 1353
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: A0A067KMD0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08407 PE=4 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 1.859e-153 Identity = 288/503 (57.26%), Postives = 341/503 (67.79%), Query Frame = -1 Query: 1020 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQF---------SEEKTLEVVECATPMDTDGEQKS--EASKTRRS-YLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDSSEDSVMQEGRKT---TKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFS-ETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFKA 2480 YDKIK Q VENAG+REESS R G+D S + FEP KL++YMK LA+SP G D+++LVI K+QLLAFYRLKGY QL E QF S EVV + DG+ S E +T+RS Y KRKHNLKD + P KKERS+SELM E++DS D E+GSD N S GKKRK DS D EGRKT K S + P PKPSFKIGE I R ASQMTGSPSILK+ K +G + G DV N EDAE +R + TEYSSLDELL QL AA DP+ SS II+SFFSDFR+S+++++ DK G+R+ S +G S ETFEFEDM DTYWT+R++QNGSEEQPS + + FVPVELDKP K SRKRYSD + A+KP G VDE+APAE+VM FP ++SVPSE LNKM + FGPLKESETEVD +T+RARVVF+R SDAE AY SA KFNIFG + V YQLNYTIS FK+ Sbjct: 1103 YDKIKLQMVENAGIREESSKRYGVDKSFHANLFEPGKLLEYMKALAQSPAGGADKLELVITKSQLLAFYRLKGYSQLSEFQFCGGLLENADSLHFADEVVHASPVCGDDGQISSSQEVLQTQRSSYNKRKHNLKDTILPRKKERSMSELMDESWDSIDDELGSDEKANNKLVSPSGKKRKGSDSFADDSAMEGRKTISLAKVSTTAPPVPKPSFKIGECIRRVASQMTGSPSILKANS---QKQEGSSDGLVGDGSDVSFQNNEDAEMRRMTVPTEYSSLDELLSQLTTAARDPLTRCSSSTIIVSFFSDFRNSVIMEQ--HDKVGGKRRHS----VGASPETFEFEDMGDTYWTDRVIQNGSEEQPSRKSRKRDNLFVPVELDKPANK-SNSRKRYSDVNCGQAAEKPAGSVDEKAPAELVMHFPVVDSVPSEISLNKMFRRFGPLKESETEVDKDTNRARVVFKRCSDAEAAYGSAPKFNIFGSMLVNYQLNYTISVPFKS 1595
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Match: B9HU16_POPTR (Dentin sialophosphoprotein OS=Populus trichocarpa GN=POPTR_0010s22390g PE=4 SV=2) HSP 1 Score: 491.115 bits (1263), Expect = 3.436e-151 Identity = 282/500 (56.40%), Postives = 352/500 (70.40%), Query Frame = -1 Query: 1023 YDKIKFQKVENAGVREESSLRDGIDVSLSPSSFEPDKLIDYMKELAESPYSGGDRIDLVIAKAQLLAFYRLKGYHQLPESQFSE---EKTLEV------VECATPMDTDGEQKS---EASKTRR-SYLKRKHNLKDGLYPSKKERSLSELMSETFDSPDGEIGSDVMGNKPPSSSFGKKRKAIDS-SEDSVMQEGRKTTKGSLSTPHFPKPSFKIGERISRAASQMTGSPSILKSGGDRLHKLDGGCETSATCGYDVPVDNLEDAERKRTDILTEYSSXXXXXXXXXLAACDPMKGYSSLNIIISFFSDFRDSIVLDRLSRDKAVGQRKKSPNSIIGFSETFEFEDMSDTYWTNRIVQNGSEEQPSVGTDRGQYQFVPVELDKPIQKVRKSRKRYSDTSHDLTAQKPPGYVDERAPAEIVMSFPEINSVPSETKLNKMLKHFGPLKESETEVDCETSRARVVFRRSSDAEVAYNSARKFNIFGPVSVTYQLNYTISESFK 2480 YD+IK Q VEN G+R E+S RDG+D +S F+PDKL+DYMK LA+SP G +R++ VIAK+QLLAFYRLKGY +LPE QF EK+ + ++ + + D Q S E +T+R S KRKHNLKD +YP KKER+LS+L+S+++DS EIGSD N S GKKRK D+ ++D+ M RKT + + KPSFKIGE I R ASQMTGSPSILK K+DG + G D + EDAE KR + TEYSSLD+LL QLHL A DP+KGY LNIIISFFSDFR+S+V+D+ DK G+RK S +S GF ETFEFEDM+DTYWT+R++QNGSEEQP + + FVPV LDKP + SRK+YSD+++D++AQKP GYVDE+APAE+VM FP ++SVPSE LNKM + FGPLKESETEVD +T+RARV+F+R SDAE AY SA KFNIFGP+ V YQLNY+IS FK Sbjct: 895 YDEIKCQVVENTGIRPEASTRDGVDKDMSADLFQPDKLVDYMKALAQSPSGGANRLEFVIAKSQLLAFYRLKGYSELPEYQFCGGLLEKSDALQFEDGSIDHTSAVYEDHGQISSGEEILQTQRGSSHKRKHNLKDSIYPRKKERNLSDLISDSWDSVGDEIGSDGKANSMLVSPSGKKRKGSDTFADDAYMTGRRKTISFAKVSSTALKPSFKIGECIQRVASQMTGSPSILKCNS---PKVDGSSDGLVGDGSDASFLHSEDAEIKRIIVPTEYSSLDDLLSQLHLTAQDPLKGYGFLNIIISFFSDFRNSVVMDQ--HDKVSGKRKTS-HSSGGFPETFEFEDMNDTYWTDRVIQNGSEEQPPRKSRKRDNLFVPVVLDKPSGR-SNSRKQYSDSNYDVSAQKPAGYVDEKAPAELVMHFPVVDSVPSEISLNKMFRRFGPLKESETEVDRDTNRARVIFKRCSDAEAAYGSAPKFNIFGPILVNYQLNYSISVPFK 1387 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0098079 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098079 ID=g.barbadense_cottongen_reftransV1_0098079; Name=g.barbadense_cottongen_reftransV1_0098079; organism=Gossypium barbadense; type=contig; length=2480bpback to top |