g.barbadense_cottongen_reftransV1_0098068, g.barbadense_cottongen_reftransV1_0098068 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0098068
Unique Nameg.barbadense_cottongen_reftransV1_0098068
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1928
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AFG3 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.392e-11
Identity = 67/233 (28.76%), Postives = 108/233 (46.35%), Query Frame = 1
Query:  736 DKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYD------LELTAVKDNTELRKLLIETTS--KSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLK-LETHPLF-DAIDGLM-KEVKITP----ADVA 1389
            D+ K+ I + V F ++   Y ++G    RG +L GPPGTGK+ +  A A   N           +E+      + +R L  +  S   SII I++ID      G+ + KGG                 G +   + TL+ LL  +DG  ++   + +++  TN  + LD AL+R GR D+HI++      G + +   +LK L   PL  D ++ L  K   +TP    AD+A
Sbjct:  294 DEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDA----IGKERGKGG--------------ALGGANDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIA 506          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: FTSH_RALPJ (ATP-dependent zinc metalloprotease FtsH OS=Ralstonia pickettii (strain 12J) GN=ftsH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.811e-11
Identity = 58/201 (28.86%), Postives = 93/201 (46.27%), Query Frame = 1
Query:  736 DKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDL------ELTAVKDNTELRKLL--IETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLK 1314
            D+ KE + ++V+F +  + Y R+G    +G LL G PGTGK+ +  A+A       + +      E+        +R L    ET +  II I+++D             GK  A +           G +   + TL+ LL  +DG  S  G   +I+  TN  E LDPAL+R GR D+H+ L     +G + + K ++K
Sbjct:  246 DEAKEELSEIVSFLKDPQRYQRLGGKIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSDFVEMFVGVGAARVRDLFKQAETKAPCIIFIDELDAL-----------GKTRALNAV---------GGNEEREQTLNQLLVEMDGFDSNKG--VIIMAATNRPEILDPALLRPGRFDRHVALDRPDLKGREQILKVHVK 424          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Rpt2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 6.797e-11
Identity = 60/194 (30.93%), Postives = 91/194 (46.91%), Query Frame = 1
Query:  706 ATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLN---YDVYDLELTA--VKDNTELRKLLI---ETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIEL 1263
            A  G +  +  + KE +E  +T  E   +Y  +G    +G +LYGPPGTGK+ +  A+AN  +     V   EL    + D  +L + L    E  + SI+ I++ID      G ++                    SG     + T+  LLN +DG  S   G+  ++  TN +E LDPALIR GR+D+ IE 
Sbjct:  184 ADIGGLDTQIQEIKESVELPLTHPE---YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA----VGTKR----------------YDSNSGGEREIQRTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIEF 352          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: FTSH_PELLD (ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon luteolum (strain DSM 273) GN=ftsH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.984e-11
Identity = 66/243 (27.16%), Postives = 112/243 (46.09%), Query Frame = 1
Query:  622 RKLYTNSPGYKWPSY---KQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDL------ELTAVKDNTELRKLLIETTSKS--IIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEG----FKVLAKN 1305
            R++    PG ++ +    K  ++ ++      TF  +A   + K E++E +V F +  + Y R+G    +G LL GPPGTGK+ +  A+A   +   + +      E+        +R L  +   K+  II I++ID      G+ + KG  AM              G +   + TL+ LL  +DG  +  G   +++  TN  + LDPAL+R GR D+ I +     +G    F+V  KN
Sbjct:  165 RRMGAGGPGAQFMNIGKNKAALYENLDEHTRITFKDVAGLDEAKAEVME-VVDFLKDPKKYTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGEADVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDA----VGRSRGKG--AMM-------------GGNDERENTLNQLLVEMDGFATDKG--VILMAATNRPDVLDPALLRPGRFDRQIMVDKPDLKGRMDTFRVHTKN 385          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: YJOB_BACSU (Uncharacterized ATPase YjoB OS=Bacillus subtilis (strain 168) GN=yjoB PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.443e-11
Identity = 61/220 (27.73%), Postives = 97/220 (44.09%), Query Frame = 1
Query:  727 LEPDKKKEIIEDLVTFSES-KEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLL--IETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRR-GRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKIT 1374
            + P  KKEI   +  F  S K FY      +KRG LLYGPPG GK+T++ ++A  ++  V   ++T    +  + ++       + +++VIEDID               +M +D                     S  LN +DG  S  G    ++ TTNY E++DP L+ R GR D+  E+     E    L   Y+K+    +F +   +    K+T
Sbjct:  189 MNPLLKKEIYRSIDQFFHSDKSFYQTYDIPYKRGILLYGPPGNGKTTLVKSIAGSIDAPVAYWQITEFTSSETIEEVFQAARRLAPAVLVIEDID---------------SMPED-------------------VRSFFLNTLDGATSKEG--LFLIGTTNYPEEIDPGLMNRAGRFDRAYEIGLPDEE----LRLEYMKMRGFGIFLSEGEIKNAAKLT 368          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: F6HV43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02060 PE=3 SV=1)

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 303/459 (66.01%), Postives = 368/459 (80.17%), Query Frame = 1
Query:  103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGD--RLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQE-KRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXX--XXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPK--SPLDDAEKCLWSLIQAL 1458
            M EM+  +GS  A  MF+WA+ RQY PY+LR Y EKY+H ++++  PYI+I++ EFT +  R KRSEAY A+E YLSANSS  AKRLKA++ KDS ++VLSMD++E+VTDEF+G K+WW ++K     + +++YP  + KRYY+LTFHK+YR++I G+YL HV+KEGK I VRNRQRKLYTN+P   W  YK+++WSH+ FEHPATF T+A+E  KK+EI+ DL  F   KE+Y++IGKAWKRGYLL+GPPGTGKS+MIAAMANLLNYD+YDLELT+VKDNTELRKLLIETTSKSI+VIEDIDCSLDLTGQRKKK  K   D+E +      K + G S  SKVTLSGLLNFIDGLWSACG ERLIVFTTN+VEKLDPALIRRGRMDKHIELSYC FE FKVLAKNYL L++H LF +I  L++E  +TPADVAENLMPK  S  D    CL +LIQAL
Sbjct:    3 MAEMFAELGSLAAGAMFLWAMFRQYFPYQLRPYIEKYSHNLVSFVYPYIQITVQEFTENSFRRKRSEAYAAIENYLSANSSTRAKRLKADIVKDSQSVVLSMDDHEEVTDEFKGVKLWWASNKNPPPMQTISFYPAADGKRYYKLTFHKQYRDLIVGSYLNHVIKEGKAIAVRNRQRKLYTNNPSQNWYGYKKSVWSHVTFEHPATFETLAMESKKKEEIVNDLTIFRTRKEYYSKIGKAWKRGYLLHGPPGTGKSSMIAAMANLLNYDIYDLELTSVKDNTELRKLLIETTSKSILVIEDIDCSLDLTGQRKKKKEKEEEDEESKDNPILKKGKEGESKESKVTLSGLLNFIDGLWSACGEERLIVFTTNHVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEETNMTPADVAENLMPKSISTDDPGTACLENLIQAL 461          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: B9RUJ6_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0853490 PE=3 SV=1)

HSP 1 Score: 608.601 bits (1568), Expect = 0.000e+0
Identity = 290/464 (62.50%), Postives = 364/464 (78.45%), Query Frame = 1
Query:  100 TMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPE-QEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQR----------KKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458
            ++ EMWT +GS IA  MF WA+ +QY PY+ R Y ++YT  ++ Y  PY++I+ HE+TG+RLKRSE Y  ++ YLSA SS TAKRLKA++ KD  +L+LSMD++E++TDE+ G KVWW +SK    ++ +++YPE +E+RY++LT H+R+R++IT +Y++HV+KEGK I +RNRQRKLYTN+P   W  +K + WSH+VFEHPATF T+ +   KK+EI  DL+ FS+ KE+YA+IGKAWKRGYLLYGPPGTGKSTMIAAMAN LNYDVYDLELT VKDN+ELRKLLIETTSKSIIVIEDIDCSLDLTGQR               +   D   ++K+  E+  N G SKVTLSGLLNFIDG+WSACGGER+IVFTTNYVEKLDPALIRRGRMDKHIE+SYC FE FKVLAKNYL +E+H L+  I  L++E  +TPADVAENLMPKS  +D + CL +LI AL
Sbjct:    2 SIVEMWTNLGSAIAGIMFAWAMFQQYFPYQFRGYLDRYTRKLVAYVYPYLQITFHEYTGERLKRSELYANIQNYLSATSSTTAKRLKADVVKDGQSLILSMDDHEEITDEYNGIKVWWASSKTTPKSQTISWYPEAEERRYFKLTVHRRHRDIITTSYIDHVLKEGKTISIRNRQRKLYTNNPSQNWYGWKASKWSHVVFEHPATFDTLGMATKKKQEIKNDLIKFSKGKEYYAKIGKAWKRGYLLYGPPGTGKSTMIAAMANFLNYDVYDLELTTVKDNSELRKLLIETTSKSIIVIEDIDCSLDLTGQRKPKKEKDDDDDDNDDEKKKDPVSKKKKKDEDESNKG-SKVTLSGLLNFIDGIWSACGGERIIVFTTNYVEKLDPALIRRGRMDKHIEMSYCCFEAFKVLAKNYLDVESHELYGKISKLLEETNMTPADVAENLMPKSDEEDEDTCLKNLIAAL 464          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: F6HV47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02100 PE=3 SV=1)

HSP 1 Score: 606.29 bits (1562), Expect = 0.000e+0
Identity = 297/454 (65.42%), Postives = 358/454 (78.85%), Query Frame = 1
Query:  103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPE-QEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDD-AEKCLWSLIQAL 1458
            M EMW   GS +A  MF+W + +QY P++ R Y EKY+  ++++  PYI+I+  EF+ DR KRSEAYVA+E YLS N+S  AKRLKA++ KDS +LVLSMD+ E+VTDEF+G K+WW + K    T+  ++YP   EKR+Y+LTFHK +REM  G+YL HV+KEGK I VRNRQRKLYTN+P  KW  Y++T+WSH+ FEHPA F T+A+EP KK+EI+ DL  FS  KE+Y++IGKAWKRGYLLYGPPGTGKSTMIAAMANLL+YD+YDLELT+VK NTELR LLIET +KSIIVIEDIDCSLDLTGQRKKK  +   +++K+     E+ G S  SKVTLSGLLN IDGLWS CG ERLI+FTTNYVEKLDPALIRRGRMDKHIELSYC FE FKVLAKNYL L++H LF +I  L++E  +TPADVAENLMPKS   D    CL SLIQAL
Sbjct:    1 MGEMWAKPGSLVAGAMFLWVMFQQYTPHQFRSYIEKYSQKLVSFVYPYIQITFQEFSEDRFKRSEAYVAIENYLSVNASTRAKRLKADVIKDSQSLVLSMDDREEVTDEFKGVKLWWASHKNPPKTQTFSFYPAADEKRFYKLTFHKNHREMFVGSYLNHVMKEGKAIEVRNRQRKLYTNNPSDKWHGYRRTLWSHVAFEHPARFETLAMEPKKKEEIVNDLTIFSRRKEYYSKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLDYDIYDLELTSVKSNTELRMLLIETRNKSIIVIEDIDCSLDLTGQRKKK-KETNEEEKKDPIRKMEKEGESKESKVTLSGLLNVIDGLWSTCGEERLIIFTTNYVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEETNMTPADVAENLMPKSVTGDPGTTCLESLIQAL 453          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: W9QX89_9ROSA (Putative mitochondrial chaperone BCS1-B OS=Morus notabilis GN=L484_010477 PE=3 SV=1)

HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0
Identity = 292/457 (63.89%), Postives = 362/457 (79.21%), Query Frame = 1
Query:  109 EMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYP-EQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNS------GNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458
            + +  +GS +   MF WAI +QY PY+LR Y EKY+H ++ Y  PYI++  ++FTG+RL RSEAY A++ YLS NSS  AKRLKA++ K   +LVLSMD++E+V D F+G K+WW + K    T+ ++++P   E+RYYRLTFHKR+R++I G YL+HV+KEGK I+VRNRQRKLYTN+  Y         WSH+VFEHPATF T+A+EP+KKKEII+DL+ FS++++FYARIG+AWKRGYLLYGPPGTGKSTMIAAMANLLNYD+YDLELTAVKDNTELR+LLIET+SKSIIVIEDIDCSL+LTGQRKK+  K   +D+ +  + + +   S        S+VTLSGLLNFIDGLWSACGGERLIVFTTNY EKLDPALIR+GRMDKHIELSYCGFE FKVLAKNYL++E H LF  I  L+ + KITPADVAE+LMPK+   DAE  L SL++ L
Sbjct:    9 DTFAQLGSLVGGLMFFWAIFQQYFPYQLRTYLEKYSHRLVNYVYPYIQVRFNDFTGERLMRSEAYSAIQNYLSVNSSMQAKRLKADIVKKGQSLVLSMDDHEEVADVFKGVKLWWASGKNTPKTQSVSFFPTSDERRYYRLTFHKRHRDLIIGPYLKHVLKEGKAIKVRNRQRKLYTNNGAY---------WSHVVFEHPATFQTLAMEPEKKKEIIDDLIAFSQAEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLNYDIYDLELTAVKDNTELRRLLIETSSKSIIVIEDIDCSLELTGQRKKEKKKEKKEDQDQEGKDQNKEKPSKEDRDGKGSQVTLSGLLNFIDGLWSACGGERLIVFTTNYKEKLDPALIRKGRMDKHIELSYCGFEAFKVLAKNYLQVEEHSLFPTISNLLGDTKITPADVAEHLMPKTIFGDAEISLNSLVKGL 456          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: Q75NU0_TOBAC (Putative ATPase OS=Nicotiana tabacum GN=NtAAA1 PE=2 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 293/453 (64.68%), Postives = 360/453 (79.47%), Query Frame = 1
Query:  103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXX-XXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458
            + + W  +G++IASF+F+W +IR+YCP EL R  +K+T  I ++F P+I+ISI EF  + LK  +AY AVEAYLS + +K AK+L+AE       LVLSMDE+E+VTDEF GAK+ W++ K+V   R   Y PE E++YY++TFHK+YR+M+T  YLEHV+K GKEI++RNR+RKLYTN        + +T WSHIVFEHPATF ++A+E +KK+EI++DL+ F ESK+FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL+YDVYDLELT+V+DNTELR+LL ET+SKSIIVIEDIDCSLDLTGQRKKK  K   +   + K+    +      S+VTLSGLLNFIDGLWSAC GER+IVFTTNYV+KLDPAL RRGRMDKHIELSYC FEGF+VLAKNYL L+ HPLF+ I+ LMKE KI PADVAE+LMP SP +DA KCL  LI AL
Sbjct:    7 LLQSWGGLGTSIASFIFMWDMIRRYCPPELIRASDKWTRRIRSFFYPFIQISISEFMSNNLKPHDAYAAVEAYLSVHLAKEAKKLRAETVHGGGKLVLSMDEHERVTDEFGGAKIQWISGKIVQ--RESKYLPEVERKYYKVTFHKKYRDMVTDTYLEHVIKTGKEIQMRNRKRKLYTNG-------HNKTTWSHIVFEHPATFDSLAMEAEKKREIVDDLLMFRESKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLDYDVYDLELTSVRDNTELRRLLAETSSKSIIVIEDIDCSLDLTGQRKKKQEKPPEEKTSKTKKEVPRKDTEESGSRVTLSGLLNFIDGLWSACSGERIIVFTTNYVDKLDPALTRRGRMDKHIELSYCSFEGFEVLAKNYLLLDEHPLFEPIEMLMKETKIIPADVAESLMPSSPKEDAGKCLLKLIDAL 450          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
AFG3_YEAST4.392e-1128.76Mitochondrial respiratory chain complexes assembly... [more]
FTSH_RALPJ4.811e-1128.86ATP-dependent zinc metalloprotease FtsH OS=Ralston... [more]
PRS4_DROME6.797e-1130.9326S protease regulatory subunit 4 OS=Drosophila me... [more]
FTSH_PELLD6.984e-1127.16ATP-dependent zinc metalloprotease FtsH OS=Pelodic... [more]
YJOB_BACSU7.443e-1127.73Uncharacterized ATPase YjoB OS=Bacillus subtilis (... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
F6HV43_VITVI0.000e+066.01Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RUJ6_RICCO0.000e+062.50ATP binding protein, putative OS=Ricinus communis ... [more]
F6HV47_VITVI0.000e+065.42Putative uncharacterized protein OS=Vitis vinifera... [more]
W9QX89_9ROSA0.000e+063.89Putative mitochondrial chaperone BCS1-B OS=Morus n... [more]
Q75NU0_TOBAC0.000e+064.68Putative ATPase OS=Nicotiana tabacum GN=NtAAA1 PE=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 446..484
NoneNo IPR availablePANTHERPTHR23070:SF42SUBFAMILY NOT NAMEDcoord: 1..478
NoneNo IPR availablePANTHERPTHR23070BCS1 AAA-TYPE ATPASEcoord: 1..478
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..501
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 13..30
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 246..399
e-value: 3.8E-9
score: 46.4
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 251..396
e-value: 2.7E-15
score: 56.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 227..393
e-value: 7.7E-38
score: 129.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 107..462
IPR025753AAA-type ATPase, N-terminal domainPFAMPF14363AAA_assoccoord: 35..127
e-value: 7.3E-25
score: 87.0
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 367..386

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0098068 ID=g.barbadense_cottongen_reftransV1_0098068; Name=g.barbadense_cottongen_reftransV1_0098068; organism=Gossypium barbadense; type=contig; length=1928bp
ATCTGCTTACGCAGAAAGGCTACTTTAAAAAGCAAAGAGCAAGGAGTTTG
CAATAAGCCGAGAGCAAAAAAGAAAAAACTGATGGAGATGGTGCCTTCAA
CAATGACAGAGATGTGGACGACAATGGGTTCAACCATTGCCAGTTTCATG
TTCATATGGGCTATTATTCGTCAATATTGCCCTTACGAACTCCGCCGTTA
CTTCGAAAAATACACTCACACCATCATGACCTATTTCTCCCCTTACATCA
AAATCTCCATCCACGAATTCACCGGCGATCGCCTCAAACGCAGCGAGGCT
TACGTCGCCGTTGAAGCTTATCTCAGCGCCAACTCTTCCAAAACAGCTAA
AAGGTTAAAAGCCGAGATGGGAAAAGACAGCAACAACTTAGTTCTCAGCA
TGGACGAATACGAGAAAGTAACCGACGAGTTCCGAGGAGCTAAAGTATGG
TGGGTAGCGAGCAAAGTGGTGTCAGCTACTCGGCCCATGGCGTATTATCC
CGAACAGGAGAAAAGGTATTACAGGCTCACTTTTCATAAACGGTACAGAG
AGATGATAACCGGTGCTTATTTAGAACATGTAGTGAAAGAAGGGAAGGAA
ATTAGAGTGAGGAACAGGCAAAGGAAGCTTTACACAAACAGTCCAGGTTA
TAAATGGCCGAGTTATAAACAAACCATGTGGAGTCACATCGTGTTTGAAC
ATCCAGCTACGTTTGGAACAATGGCGTTGGAACCAGATAAGAAGAAAGAG
ATTATTGAAGATCTTGTTACTTTTAGTGAAAGTAAAGAGTTTTATGCTAG
GATTGGTAAAGCTTGGAAACGTGGGTATCTTCTTTATGGACCACCAGGGA
CTGGGAAATCAACTATGATTGCTGCAATGGCGAATTTGTTGAATTATGAT
GTTTATGATCTTGAACTCACTGCTGTTAAAGATAATACTGAGTTAAGGAA
GCTTTTGATTGAGACAACGAGTAAGTCTATTATAGTGATTGAAGATATAG
ATTGTTCACTTGATCTTACTGGTCAAAGGAAGAAAAAAGGCGGGAAAGCT
ATGGCGGATGATGAGAAAGAGAGGAAAGAGGTAAAAGAAGAAAGTGGTAA
TAGTGGTAACAGCAAAGTGACGCTTTCGGGTTTATTGAATTTTATCGATG
GGCTTTGGTCTGCTTGTGGTGGGGAGAGGTTGATTGTTTTTACTACTAAT
TATGTGGAGAAACTTGATCCTGCATTGATAAGACGGGGCAGGATGGATAA
ACATATTGAGCTTTCTTATTGTGGGTTTGAAGGGTTCAAGGTGCTTGCTA
AGAATTATTTGAAATTGGAAACTCATCCATTGTTTGATGCCATTGATGGG
TTGATGAAAGAGGTTAAGATTACACCTGCTGATGTTGCTGAGAATCTTAT
GCCTAAGTCTCCATTAGATGATGCTGAGAAATGTCTGTGGAGCTTGATTC
AGGCTCTTGAGGAAGCTAAGGAAGAAGCTGAAGCTGAAGCTGAAGCTGCG
ACTGCCAAGAAGGTTGTAGAGCAAAGTCAGGATGGTGGTGGTGTATGCAG
TGAAAATTGTATGGCAGAGAAGGCTTCAGAGTGAGCCAAATTCCAGATTG
ATTTTTAGTGGATTACAGATTCGTGGGCGTGATTGTTAGAAGGGATTCTA
TTTTAGCTGTTAAAAGCAAAGGGTATGTGAGCGCATCAGATTGGAATTTA
TTAGTGTTAATAATAACATAAGCTGTTTTATTTAACAAAACTTGAGCATG
CTATGGATGTTCATTAACTGTAGGAAAACAAGATGCATACATACATACAT
ACATCAATGGCAGAAAATTTGAAGTACTGAATGATCAAAAGGAAATTAAT
GCATTCATACATACATACCAATGGGCCCTGGACTATGTTCTAGGATATAG
GAACAACTCAAAATCTTAAGAAACTATA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
IPR025753AAA_N_dom
IPR003960ATPase_AAA_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding