g.barbadense_cottongen_reftransV1_0098068, g.barbadense_cottongen_reftransV1_0098068 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AFG3 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.392e-11 Identity = 67/233 (28.76%), Postives = 108/233 (46.35%), Query Frame = 1 Query: 736 DKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYD------LELTAVKDNTELRKLLIETTS--KSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLK-LETHPLF-DAIDGLM-KEVKITP----ADVA 1389 D+ K+ I + V F ++ Y ++G RG +L GPPGTGK+ + A A N +E+ + +R L + S SII I++ID G+ + KGG G + + TL+ LL +DG ++ + +++ TN + LD AL+R GR D+HI++ G + + +LK L PL D ++ L K +TP AD+A Sbjct: 294 DEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDA----IGKERGKGG--------------ALGGANDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIA 506
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: FTSH_RALPJ (ATP-dependent zinc metalloprotease FtsH OS=Ralstonia pickettii (strain 12J) GN=ftsH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.811e-11 Identity = 58/201 (28.86%), Postives = 93/201 (46.27%), Query Frame = 1 Query: 736 DKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDL------ELTAVKDNTELRKLL--IETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLK 1314 D+ KE + ++V+F + + Y R+G +G LL G PGTGK+ + A+A + + E+ +R L ET + II I+++D GK A + G + + TL+ LL +DG S G +I+ TN E LDPAL+R GR D+H+ L +G + + K ++K Sbjct: 246 DEAKEELSEIVSFLKDPQRYQRLGGKIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSDFVEMFVGVGAARVRDLFKQAETKAPCIIFIDELDAL-----------GKTRALNAV---------GGNEEREQTLNQLLVEMDGFDSNKG--VIIMAATNRPEILDPALLRPGRFDRHVALDRPDLKGREQILKVHVK 424
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Rpt2 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 6.797e-11 Identity = 60/194 (30.93%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 706 ATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLN---YDVYDLELTA--VKDNTELRKLLI---ETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIEL 1263 A G + + + KE +E +T E +Y +G +G +LYGPPGTGK+ + A+AN + V EL + D +L + L E + SI+ I++ID G ++ SG + T+ LLN +DG S G+ ++ TN +E LDPALIR GR+D+ IE Sbjct: 184 ADIGGLDTQIQEIKESVELPLTHPE---YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA----VGTKR----------------YDSNSGGEREIQRTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIEF 352
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: FTSH_PELLD (ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon luteolum (strain DSM 273) GN=ftsH PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.984e-11 Identity = 66/243 (27.16%), Postives = 112/243 (46.09%), Query Frame = 1 Query: 622 RKLYTNSPGYKWPSY---KQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDL------ELTAVKDNTELRKLLIETTSKS--IIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEG----FKVLAKN 1305 R++ PG ++ + K ++ ++ TF +A + K E++E +V F + + Y R+G +G LL GPPGTGK+ + A+A + + + E+ +R L + K+ II I++ID G+ + KG AM G + + TL+ LL +DG + G +++ TN + LDPAL+R GR D+ I + +G F+V KN Sbjct: 165 RRMGAGGPGAQFMNIGKNKAALYENLDEHTRITFKDVAGLDEAKAEVME-VVDFLKDPKKYTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGEADVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDA----VGRSRGKG--AMM-------------GGNDERENTLNQLLVEMDGFATDKG--VILMAATNRPDVLDPALLRPGRFDRQIMVDKPDLKGRMDTFRVHTKN 385
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: YJOB_BACSU (Uncharacterized ATPase YjoB OS=Bacillus subtilis (strain 168) GN=yjoB PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.443e-11 Identity = 61/220 (27.73%), Postives = 97/220 (44.09%), Query Frame = 1 Query: 727 LEPDKKKEIIEDLVTFSES-KEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLL--IETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRR-GRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKIT 1374 + P KKEI + F S K FY +KRG LLYGPPG GK+T++ ++A ++ V ++T + + ++ + +++VIEDID +M +D S LN +DG S G ++ TTNY E++DP L+ R GR D+ E+ E L Y+K+ +F + + K+T Sbjct: 189 MNPLLKKEIYRSIDQFFHSDKSFYQTYDIPYKRGILLYGPPGNGKTTLVKSIAGSIDAPVAYWQITEFTSSETIEEVFQAARRLAPAVLVIEDID---------------SMPED-------------------VRSFFLNTLDGATSKEG--LFLIGTTNYPEEIDPGLMNRAGRFDRAYEIGLPDEE----LRLEYMKMRGFGIFLSEGEIKNAAKLT 368
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: F6HV43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02060 PE=3 SV=1) HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0 Identity = 303/459 (66.01%), Postives = 368/459 (80.17%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGD--RLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQE-KRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXX--XXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPK--SPLDDAEKCLWSLIQAL 1458 M EM+ +GS A MF+WA+ RQY PY+LR Y EKY+H ++++ PYI+I++ EFT + R KRSEAY A+E YLSANSS AKRLKA++ KDS ++VLSMD++E+VTDEF+G K+WW ++K + +++YP + KRYY+LTFHK+YR++I G+YL HV+KEGK I VRNRQRKLYTN+P W YK+++WSH+ FEHPATF T+A+E KK+EI+ DL F KE+Y++IGKAWKRGYLL+GPPGTGKS+MIAAMANLLNYD+YDLELT+VKDNTELRKLLIETTSKSI+VIEDIDCSLDLTGQRKKK K D+E + K + G S SKVTLSGLLNFIDGLWSACG ERLIVFTTN+VEKLDPALIRRGRMDKHIELSYC FE FKVLAKNYL L++H LF +I L++E +TPADVAENLMPK S D CL +LIQAL Sbjct: 3 MAEMFAELGSLAAGAMFLWAMFRQYFPYQLRPYIEKYSHNLVSFVYPYIQITVQEFTENSFRRKRSEAYAAIENYLSANSSTRAKRLKADIVKDSQSVVLSMDDHEEVTDEFKGVKLWWASNKNPPPMQTISFYPAADGKRYYKLTFHKQYRDLIVGSYLNHVIKEGKAIAVRNRQRKLYTNNPSQNWYGYKKSVWSHVTFEHPATFETLAMESKKKEEIVNDLTIFRTRKEYYSKIGKAWKRGYLLHGPPGTGKSSMIAAMANLLNYDIYDLELTSVKDNTELRKLLIETTSKSILVIEDIDCSLDLTGQRKKKKEKEEEDEESKDNPILKKGKEGESKESKVTLSGLLNFIDGLWSACGEERLIVFTTNHVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEETNMTPADVAENLMPKSISTDDPGTACLENLIQAL 461
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: B9RUJ6_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0853490 PE=3 SV=1) HSP 1 Score: 608.601 bits (1568), Expect = 0.000e+0 Identity = 290/464 (62.50%), Postives = 364/464 (78.45%), Query Frame = 1 Query: 100 TMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPE-QEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQR----------KKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 ++ EMWT +GS IA MF WA+ +QY PY+ R Y ++YT ++ Y PY++I+ HE+TG+RLKRSE Y ++ YLSA SS TAKRLKA++ KD +L+LSMD++E++TDE+ G KVWW +SK ++ +++YPE +E+RY++LT H+R+R++IT +Y++HV+KEGK I +RNRQRKLYTN+P W +K + WSH+VFEHPATF T+ + KK+EI DL+ FS+ KE+YA+IGKAWKRGYLLYGPPGTGKSTMIAAMAN LNYDVYDLELT VKDN+ELRKLLIETTSKSIIVIEDIDCSLDLTGQR + D ++K+ E+ N G SKVTLSGLLNFIDG+WSACGGER+IVFTTNYVEKLDPALIRRGRMDKHIE+SYC FE FKVLAKNYL +E+H L+ I L++E +TPADVAENLMPKS +D + CL +LI AL Sbjct: 2 SIVEMWTNLGSAIAGIMFAWAMFQQYFPYQFRGYLDRYTRKLVAYVYPYLQITFHEYTGERLKRSELYANIQNYLSATSSTTAKRLKADVVKDGQSLILSMDDHEEITDEYNGIKVWWASSKTTPKSQTISWYPEAEERRYFKLTVHRRHRDIITTSYIDHVLKEGKTISIRNRQRKLYTNNPSQNWYGWKASKWSHVVFEHPATFDTLGMATKKKQEIKNDLIKFSKGKEYYAKIGKAWKRGYLLYGPPGTGKSTMIAAMANFLNYDVYDLELTTVKDNSELRKLLIETTSKSIIVIEDIDCSLDLTGQRKPKKEKDDDDDDNDDEKKKDPVSKKKKKDEDESNKG-SKVTLSGLLNFIDGIWSACGGERIIVFTTNYVEKLDPALIRRGRMDKHIEMSYCCFEAFKVLAKNYLDVESHELYGKISKLLEETNMTPADVAENLMPKSDEEDEDTCLKNLIAAL 464
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: F6HV47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02100 PE=3 SV=1) HSP 1 Score: 606.29 bits (1562), Expect = 0.000e+0 Identity = 297/454 (65.42%), Postives = 358/454 (78.85%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPE-QEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDD-AEKCLWSLIQAL 1458 M EMW GS +A MF+W + +QY P++ R Y EKY+ ++++ PYI+I+ EF+ DR KRSEAYVA+E YLS N+S AKRLKA++ KDS +LVLSMD+ E+VTDEF+G K+WW + K T+ ++YP EKR+Y+LTFHK +REM G+YL HV+KEGK I VRNRQRKLYTN+P KW Y++T+WSH+ FEHPA F T+A+EP KK+EI+ DL FS KE+Y++IGKAWKRGYLLYGPPGTGKSTMIAAMANLL+YD+YDLELT+VK NTELR LLIET +KSIIVIEDIDCSLDLTGQRKKK + +++K+ E+ G S SKVTLSGLLN IDGLWS CG ERLI+FTTNYVEKLDPALIRRGRMDKHIELSYC FE FKVLAKNYL L++H LF +I L++E +TPADVAENLMPKS D CL SLIQAL Sbjct: 1 MGEMWAKPGSLVAGAMFLWVMFQQYTPHQFRSYIEKYSQKLVSFVYPYIQITFQEFSEDRFKRSEAYVAIENYLSVNASTRAKRLKADVIKDSQSLVLSMDDREEVTDEFKGVKLWWASHKNPPKTQTFSFYPAADEKRFYKLTFHKNHREMFVGSYLNHVMKEGKAIEVRNRQRKLYTNNPSDKWHGYRRTLWSHVAFEHPARFETLAMEPKKKEEIVNDLTIFSRRKEYYSKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLDYDIYDLELTSVKSNTELRMLLIETRNKSIIVIEDIDCSLDLTGQRKKK-KETNEEEKKDPIRKMEKEGESKESKVTLSGLLNVIDGLWSTCGEERLIIFTTNYVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEETNMTPADVAENLMPKSVTGDPGTTCLESLIQAL 453
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: W9QX89_9ROSA (Putative mitochondrial chaperone BCS1-B OS=Morus notabilis GN=L484_010477 PE=3 SV=1) HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0 Identity = 292/457 (63.89%), Postives = 362/457 (79.21%), Query Frame = 1 Query: 109 EMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYP-EQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNS------GNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 + + +GS + MF WAI +QY PY+LR Y EKY+H ++ Y PYI++ ++FTG+RL RSEAY A++ YLS NSS AKRLKA++ K +LVLSMD++E+V D F+G K+WW + K T+ ++++P E+RYYRLTFHKR+R++I G YL+HV+KEGK I+VRNRQRKLYTN+ Y WSH+VFEHPATF T+A+EP+KKKEII+DL+ FS++++FYARIG+AWKRGYLLYGPPGTGKSTMIAAMANLLNYD+YDLELTAVKDNTELR+LLIET+SKSIIVIEDIDCSL+LTGQRKK+ K +D+ + + + + S S+VTLSGLLNFIDGLWSACGGERLIVFTTNY EKLDPALIR+GRMDKHIELSYCGFE FKVLAKNYL++E H LF I L+ + KITPADVAE+LMPK+ DAE L SL++ L Sbjct: 9 DTFAQLGSLVGGLMFFWAIFQQYFPYQLRTYLEKYSHRLVNYVYPYIQVRFNDFTGERLMRSEAYSAIQNYLSVNSSMQAKRLKADIVKKGQSLVLSMDDHEEVADVFKGVKLWWASGKNTPKTQSVSFFPTSDERRYYRLTFHKRHRDLIIGPYLKHVLKEGKAIKVRNRQRKLYTNNGAY---------WSHVVFEHPATFQTLAMEPEKKKEIIDDLIAFSQAEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLNYDIYDLELTAVKDNTELRRLLIETSSKSIIVIEDIDCSLELTGQRKKEKKKEKKEDQDQEGKDQNKEKPSKEDRDGKGSQVTLSGLLNFIDGLWSACGGERLIVFTTNYKEKLDPALIRKGRMDKHIELSYCGFEAFKVLAKNYLQVEEHSLFPTISNLLGDTKITPADVAEHLMPKTIFGDAEISLNSLVKGL 456
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: Q75NU0_TOBAC (Putative ATPase OS=Nicotiana tabacum GN=NtAAA1 PE=2 SV=1) HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0 Identity = 293/453 (64.68%), Postives = 360/453 (79.47%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXX-XXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 + + W +G++IASF+F+W +IR+YCP EL R +K+T I ++F P+I+ISI EF + LK +AY AVEAYLS + +K AK+L+AE LVLSMDE+E+VTDEF GAK+ W++ K+V R Y PE E++YY++TFHK+YR+M+T YLEHV+K GKEI++RNR+RKLYTN + +T WSHIVFEHPATF ++A+E +KK+EI++DL+ F ESK+FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL+YDVYDLELT+V+DNTELR+LL ET+SKSIIVIEDIDCSLDLTGQRKKK K + + K+ + S+VTLSGLLNFIDGLWSAC GER+IVFTTNYV+KLDPAL RRGRMDKHIELSYC FEGF+VLAKNYL L+ HPLF+ I+ LMKE KI PADVAE+LMP SP +DA KCL LI AL Sbjct: 7 LLQSWGGLGTSIASFIFMWDMIRRYCPPELIRASDKWTRRIRSFFYPFIQISISEFMSNNLKPHDAYAAVEAYLSVHLAKEAKKLRAETVHGGGKLVLSMDEHERVTDEFGGAKIQWISGKIVQ--RESKYLPEVERKYYKVTFHKKYRDMVTDTYLEHVIKTGKEIQMRNRKRKLYTNG-------HNKTTWSHIVFEHPATFDSLAMEAEKKREIVDDLLMFRESKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLDYDVYDLELTSVRDNTELRRLLAETSSKSIIVIEDIDCSLDLTGQRKKKQEKPPEEKTSKTKKEVPRKDTEESGSRVTLSGLLNFIDGLWSACSGERIIVFTTNYVDKLDPALTRRGRMDKHIELSYCSFEGFEVLAKNYLLLDEHPLFEPIEMLMKETKIIPADVAESLMPSSPKEDAGKCLLKLIDAL 450 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
Pages
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098068 ID=g.barbadense_cottongen_reftransV1_0098068; Name=g.barbadense_cottongen_reftransV1_0098068; organism=Gossypium barbadense; type=contig; length=1928bpback to top |