g.barbadense_cottongen_reftransV1_0098068, g.barbadense_cottongen_reftransV1_0098068 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AFG3 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.392e-11 Identity = 67/233 (28.76%), Postives = 108/233 (46.35%), Query Frame = 1 Query: 736 DKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYD------LELTAVKDNTELRKLLIETTS--KSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLK-LETHPLF-DAIDGLM-KEVKITP----ADVA 1389 D+ K+ I + V F ++ Y ++G RG +L GPPGTGK+ + A A N +E+ + +R L + S SII I++ID G+ + KGG G + + TL+ LL +DG ++ + +++ TN + LD AL+R GR D+HI++ G + + +LK L PL D ++ L K +TP AD+A Sbjct: 294 DEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDA----IGKERGKGG--------------ALGGANDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIA 506
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: FTSH_RALPJ (ATP-dependent zinc metalloprotease FtsH OS=Ralstonia pickettii (strain 12J) GN=ftsH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.811e-11 Identity = 58/201 (28.86%), Postives = 93/201 (46.27%), Query Frame = 1 Query: 736 DKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDL------ELTAVKDNTELRKLL--IETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLK 1314 D+ KE + ++V+F + + Y R+G +G LL G PGTGK+ + A+A + + E+ +R L ET + II I+++D GK A + G + + TL+ LL +DG S G +I+ TN E LDPAL+R GR D+H+ L +G + + K ++K Sbjct: 246 DEAKEELSEIVSFLKDPQRYQRLGGKIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSDFVEMFVGVGAARVRDLFKQAETKAPCIIFIDELDAL-----------GKTRALNAV---------GGNEEREQTLNQLLVEMDGFDSNKG--VIIMAATNRPEILDPALLRPGRFDRHVALDRPDLKGREQILKVHVK 424
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Rpt2 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 6.797e-11 Identity = 60/194 (30.93%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 706 ATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLN---YDVYDLELTA--VKDNTELRKLLI---ETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIEL 1263 A G + + + KE +E +T E +Y +G +G +LYGPPGTGK+ + A+AN + V EL + D +L + L E + SI+ I++ID G ++ SG + T+ LLN +DG S G+ ++ TN +E LDPALIR GR+D+ IE Sbjct: 184 ADIGGLDTQIQEIKESVELPLTHPE---YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA----VGTKR----------------YDSNSGGEREIQRTMLELLNQLDGFDSR--GDVKVIMATNRIETLDPALIRPGRIDRKIEF 352
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: FTSH_PELLD (ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon luteolum (strain DSM 273) GN=ftsH PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.984e-11 Identity = 66/243 (27.16%), Postives = 112/243 (46.09%), Query Frame = 1 Query: 622 RKLYTNSPGYKWPSY---KQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDL------ELTAVKDNTELRKLLIETTSKS--IIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEG----FKVLAKN 1305 R++ PG ++ + K ++ ++ TF +A + K E++E +V F + + Y R+G +G LL GPPGTGK+ + A+A + + + E+ +R L + K+ II I++ID G+ + KG AM G + + TL+ LL +DG + G +++ TN + LDPAL+R GR D+ I + +G F+V KN Sbjct: 165 RRMGAGGPGAQFMNIGKNKAALYENLDEHTRITFKDVAGLDEAKAEVME-VVDFLKDPKKYTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGEADVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDA----VGRSRGKG--AMM-------------GGNDERENTLNQLLVEMDGFATDKG--VILMAATNRPDVLDPALLRPGRFDRQIMVDKPDLKGRMDTFRVHTKN 385
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: YJOB_BACSU (Uncharacterized ATPase YjoB OS=Bacillus subtilis (strain 168) GN=yjoB PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.443e-11 Identity = 61/220 (27.73%), Postives = 97/220 (44.09%), Query Frame = 1 Query: 727 LEPDKKKEIIEDLVTFSES-KEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLL--IETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRR-GRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKIT 1374 + P KKEI + F S K FY +KRG LLYGPPG GK+T++ ++A ++ V ++T + + ++ + +++VIEDID +M +D S LN +DG S G ++ TTNY E++DP L+ R GR D+ E+ E L Y+K+ +F + + K+T Sbjct: 189 MNPLLKKEIYRSIDQFFHSDKSFYQTYDIPYKRGILLYGPPGNGKTTLVKSIAGSIDAPVAYWQITEFTSSETIEEVFQAARRLAPAVLVIEDID---------------SMPED-------------------VRSFFLNTLDGATSKEG--LFLIGTTNYPEEIDPGLMNRAGRFDRAYEIGLPDEE----LRLEYMKMRGFGIFLSEGEIKNAAKLT 368
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: A0A0D2P2C7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G034600 PE=3 SV=1) HSP 1 Score: 966.452 bits (2497), Expect = 0.000e+0 Identity = 488/500 (97.60%), Postives = 491/500 (98.20%), Query Frame = 1 Query: 82 MEMVPSTMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQALXXXXXXXXXXXXXXXXXXVVEQSQDGGGVCSENCMAEKASE 1581 MEMVPSTMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLS NSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEI+VRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDEKERKEVKEES NSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLE HPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL EEA+ EAEAA AKKVVEQSQDGGGVCSENC+AEKASE Sbjct: 1 MEMVPSTMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSVNSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIKVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDEKERKEVKEESSNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLEIHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL----EEAKEEAEAAAAKKVVEQSQDGGGVCSENCLAEKASE 496
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: A0A061FXV8_THECC (AAA-ATPase 1 OS=Theobroma cacao GN=TCM_013704 PE=3 SV=1) HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0 Identity = 408/456 (89.47%), Postives = 431/456 (94.52%), Query Frame = 1 Query: 88 MVPSTMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAM-ADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQ 1452 MVPST++EMWTTMGSTIASFMF+WAI+RQYCPYE+RRYFEKYTH I+ F PYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSK+AKRLKAEMGKDS NLVLSMDEYE+VTDE+RGAKVWWVASKVVS TRPM+YYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATF TMAL+PD+KKEIIEDLVTFS+SKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKK K + D++++ + K+ES G+SKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC FEGFKVLAKNYL LETHP+FD I GLMKE ITPADVAENLMPKSPLD+AEKCL SLIQ Sbjct: 1 MVPSTISEMWTTMGSTIASFMFLWAIVRQYCPYEVRRYFEKYTHRIIGVFYPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKSAKRLKAEMGKDSTNLVLSMDEYERVTDEYRGAKVWWVASKVVSPTRPMSYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMALDPDRKKEIIEDLVTFSKSKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKAEKPLHVDEKEKMDKEKKESKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCSFEGFKVLAKNYLNLETHPMFDTIHGLMKETNITPADVAENLMPKSPLDNAEKCLSSLIQ 456
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: V4VJP1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019846mg PE=3 SV=1) HSP 1 Score: 813.913 bits (2101), Expect = 0.000e+0 Identity = 389/459 (84.75%), Postives = 424/459 (92.37%), Query Frame = 1 Query: 88 MVPSTMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXX--XXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 MVP+T+TEM MGSTIASFMF+WAIIRQYCPYE+RR+FEKYTH IM +F PYIKISIHEFTGDRLKRSEAY AVEAYLS NSSK+AKRLKAEMGKDS+NLVLSMDEYE+VTDEFRG KVWWV+SKVVS TR M+YYPEQEKRYYRLTFHKRYRE+IT +YL+HVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATF TMALEP+KK+EIIEDLVTFS+S++FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKK K+ D++++ ++ ++E G+SKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC F+GFKVLAKNYL +ETH LF+ I LM++ KITPADVAENLMPKSP D+ EKCL SLIQAL Sbjct: 1 MVPATVTEMLAAMGSTIASFMFVWAIIRQYCPYEVRRHFEKYTHRIMGFFYPYIKISIHEFTGDRLKRSEAYAAVEAYLSVNSSKSAKRLKAEMGKDSSNLVLSMDEYERVTDEFRGVKVWWVSSKVVSTTRGMSYYPEQEKRYYRLTFHKRYREIITESYLQHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMALEPEKKQEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQKLMEDTKITPADVAENLMPKSPSDNVEKCLSSLIQAL 459
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: A0A067GKZ1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041423mg PE=3 SV=1) HSP 1 Score: 812.372 bits (2097), Expect = 0.000e+0 Identity = 389/459 (84.75%), Postives = 423/459 (92.16%), Query Frame = 1 Query: 88 MVPSTMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXX--XXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 MVP+T+TEM MGSTIASFMF+WAIIRQYCPYE+RR+FEKYTH IM +F PYIKISIHEFTGDRLKRSEAY AVEAYLS NSSK+AKRLKAEMGKDS+NLVLSMDEYE+VTDEFRG KVWWV+SKVVS TR M+YYPEQEKRYYRLTFHKRYRE+IT +YL+HVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATF TMALEP+KK EIIEDLVTFS+S++FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKK K+ D++++ ++ ++E G+SKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC F+GFKVLAKNYL +ETH LF+ I LM++ KITPADVAENLMPKSP D+ EKCL SLIQAL Sbjct: 1 MVPATVTEMLAAMGSTIASFMFVWAIIRQYCPYEVRRHFEKYTHRIMGFFYPYIKISIHEFTGDRLKRSEAYAAVEAYLSVNSSKSAKRLKAEMGKDSSNLVLSMDEYERVTDEFRGVKVWWVSSKVVSTTRGMSYYPEQEKRYYRLTFHKRYREIITESYLQHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMALEPEKKLEIIEDLVTFSKSRDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKAEKSSDDEKEKLDKEISRKEPKEEGSSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFQGFKVLAKNYLNVETHTLFETIQKLMEDTKITPADVAENLMPKSPSDNVEKCLSSLIQAL 459
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: B9R919_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_1513130 PE=3 SV=1) HSP 1 Score: 798.505 bits (2061), Expect = 0.000e+0 Identity = 385/454 (84.80%), Postives = 418/454 (92.07%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMAD--DXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 MTEMW TMGSTIASFMFIWAI RQYCPYE+RRYFEKYT IMT+F PYIKISIHE+TGDRLKRSEAY AVEAYLS NSSK+AKRLKAEMGKDS+NLVLSMDEYE+VTDEFRG KVWWV+SKVVS T+ M YP+QE+RYY+LTFHK+ RE+IT AYL+HVV+EGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATF TMALEP+KK+EIIEDL+TFS+SK+FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKK K + D D+ E++ ++E +SKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC FE FKVLA+NYL+LE HP+F+ I GLMKE KITPADVAENLMPKSPLD+AEKCL +LIQAL Sbjct: 1 MTEMWATMGSTIASFMFIWAIFRQYCPYEVRRYFEKYTQGIMTFFYPYIKISIHEYTGDRLKRSEAYAAVEAYLSLNSSKSAKRLKAEMGKDSSNLVLSMDEYERVTDEFRGVKVWWVSSKVVSPTQSM--YPQQERRYYKLTFHKKDRELITEAYLQHVVREGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMALEPEKKQEIIEDLLTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKSEKCLDDEKDKLEKELPRKELKEEASSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCSFEAFKVLARNYLQLEKHPMFNIIQGLMKETKITPADVAENLMPKSPLDNAEKCLSNLIQAL 452
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: M5WCT0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004321mg PE=3 SV=1) HSP 1 Score: 786.563 bits (2030), Expect = 0.000e+0 Identity = 376/463 (81.21%), Postives = 417/463 (90.06%), Query Frame = 1 Query: 79 LMEMVPSTMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMA--YYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNS---GNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQ 1452 +M + STMT+MW TMGST+ASFMF+WAIIRQYCPYELRR+FEKY+H IM YF PYIKISIHEFTGDRLKRSEAY AVEAYLS N+SK+AKRLKAEM KDS+NLVLSMDEYE+VTD+F+GAKVWWV SK VS R M+ YYPEQEKR+Y+LTFHK+YR++IT +YL+HVV+EGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATF TMALEPDKK+EIIEDLVTFS+SK+FYARIGKAWKRGYLL+GPPGTGKSTMIAAMANLL YDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKK K+ +DE + + + + G+SKVTLSGLLNFIDGLWSACGGERL+VFTTNYVEKLDPALIRRGRMDKHIELS+C F+GFKVLAKNYLKLETH +FD I LM EVK+TPADVAENLMPKSP DD ++CL + IQ Sbjct: 1 MMPLPSSTMTQMWATMGSTLASFMFVWAIIRQYCPYELRRFFEKYSHRIMGYFYPYIKISIHEFTGDRLKRSEAYSAVEAYLSNNTSKSAKRLKAEMVKDSSNLVLSMDEYERVTDDFQGAKVWWVLSKSVSPGRSMSMSYYPEQEKRFYKLTFHKKYRDIITESYLDHVVREGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMALEPDKKREIIEDLVTFSKSKDFYARIGKAWKRGYLLFGPPGTGKSTMIAAMANLLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKADKSSLEDETKSSKERIKEPKEEGHGSSKVTLSGLLNFIDGLWSACGGERLVVFTTNYVEKLDPALIRRGRMDKHIELSFCSFDGFKVLAKNYLKLETHQMFDTIQRLMGEVKMTPADVAENLMPKSPQDDPDRCLSNFIQ 463
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: A0A067KH87_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11560 PE=3 SV=1) HSP 1 Score: 779.245 bits (2011), Expect = 0.000e+0 Identity = 372/458 (81.22%), Postives = 415/458 (90.61%), Query Frame = 1 Query: 94 PSTMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXS---GNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 P TM+EMW TMGSTIASFMF+WAI RQYCPYE+RRY EKY+ +M++F PYIKISIHE+TG+RL+RSEAY AVEAYLS NSSK AKRLKAEMG+D +NL+LSMDEYE+VTDEF+G +VWWV+SKV+S ++ M YP+QEKRYY+LTFHK +RE+ITGAYL +VV+EGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATF TMALEP+KK+EIIEDLVTF++SK+FY+RIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKK DDEK++ E + +SKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHI+LSYC FE FKVLAKNYLKLE HP+F+ I GLMKE+KITPADVAENLMPKSPLD+A+KCL +LIQAL Sbjct: 6 PPTMSEMWATMGSTIASFMFLWAIFRQYCPYEIRRYMEKYSQRMMSFFYPYIKISIHEYTGERLRRSEAYSAVEAYLSVNSSKCAKRLKAEMGRDCSNLILSMDEYERVTDEFQGIRVWWVSSKVLSPSQSM--YPQQEKRYYKLTFHKNHREIITGAYLPYVVREGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFDTMALEPEKKQEIIEDLVTFTKSKDFYSRIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKAADKCLDDEKDKLEKEIPRKELKEEASSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIQLSYCSFEAFKVLAKNYLKLEAHPMFEIIGGLMKEIKITPADVAENLMPKSPLDNADKCLLNLIQAL 461
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: I1JZU1_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 775.007 bits (2000), Expect = 0.000e+0 Identity = 370/457 (80.96%), Postives = 419/457 (91.68%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATR-PMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXX----XXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 ++EMWTTMGST+ASFMF+W I+RQYCPY ++R+FEKYTH IM+YF PYI+IS HE+ GDRLKRSEAY AVEAYLSAN+SK+AKRLKAEMGKDS+NLVL+MDEYE+VTD++ G KVWWV+SKV+S TR PM+YYPEQEKR+Y+LTFH ++R+ ITG+YLEHV++EGKEIR+RNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATF TMA++P+KK+EIIEDL TFS+SK+FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL YDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKG K+ +DDE ++ ++ +E G SG SKVTLSGLLNFIDG+WSACGGERLIVFTTNYVEKLDPALIRRGRMDKHI+LSYC F+GFKVLA NYLKLE HPLFD I+ L+ EVKITPADVAENLMPKSPLDD KCL +LI AL Sbjct: 3 ISEMWTTMGSTLASFMFLWTIMRQYCPYGVQRFFEKYTHRIMSYFYPYIRISFHEYMGDRLKRSEAYAAVEAYLSANTSKSAKRLKAEMGKDSSNLVLTMDEYERVTDDYEGVKVWWVSSKVMSPTRSPMSYYPEQEKRFYKLTFHSKHRDTITGSYLEHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFDTMAMDPEKKQEIIEDLDTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLAYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGDKSPSDDEADKDVVGRKEAKEEGGSG-SKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIQLSYCTFDGFKVLANNYLKLEAHPLFDTIERLIGEVKITPADVAENLMPKSPLDDPHKCLSNLIVAL 458
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: I1MTN5_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0 Identity = 373/456 (81.80%), Postives = 415/456 (91.01%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATR-PMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMAD------DXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLI 1449 M+EMW TMGST+ASFMF+W I+RQYCPY ++R+FEKYTH IM+YF PYI+IS HE+ GDRLKRSEAY AVEAYLSAN+SK+AKRLKAEMGKDS+NLVL+MDEYE+VTD++ G KVWWV++KV+S TR PM+YYPEQEKR+Y+LTFH + R+ IT +YL+HV++EGKEIR+RNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATF TMA+EP+KKKEIIEDLVTFS+SK+FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL YDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKG K+ D D RKE KEE G+SG SKVTLSGLLNFIDG+WSACGGERLIVFTTNYVEKLDPALIRRGRMDKHI+LSYC F+GFKVLA NYLKLETHPLFD I+ L+ EVKITPADVAENLMPKSPLDD KCL +LI Sbjct: 3 MSEMWATMGSTLASFMFLWTIMRQYCPYGVQRFFEKYTHRIMSYFYPYIRISFHEYMGDRLKRSEAYAAVEAYLSANTSKSAKRLKAEMGKDSSNLVLTMDEYERVTDDYDGVKVWWVSNKVMSPTRSPMSYYPEQEKRFYKLTFHSKNRDTITESYLKHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFDTMAMEPEKKKEIIEDLVTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLAYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGDKSSWDEDEAEKDVIGRKEAKEEGGSSGCSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIQLSYCTFDGFKVLANNYLKLETHPLFDTIESLIGEVKITPADVAENLMPKSPLDDPHKCLSNLI 458
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: A0A0B2QB57_GLYSO (Putative mitochondrial chaperone BCS1-B OS=Glycine soja GN=glysoja_006923 PE=3 SV=1) HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0 Identity = 373/456 (81.80%), Postives = 415/456 (91.01%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATR-PMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMAD------DXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLI 1449 M+EMW TMGST+ASFMF+W I+RQYCPY ++R+FEKYTH IM+YF PYI+IS HE+ GDRLKRSEAY AVEAYLSAN+SK+AKRLKAEMGKDS+NLVL+MDEYE+VTD++ G KVWWV++KV+S TR PM+YYPEQEKR+Y+LTFH + R+ IT +YL+HV++EGKEIR+RNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATF TMA+EP+KKKEIIEDLVTFS+SK+FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL YDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKG K+ D D RKE KEE G+SG SKVTLSGLLNFIDG+WSACGGERLIVFTTNYVEKLDPALIRRGRMDKHI+LSYC F+GFKVLA NYLKLETHPLFD I+ L+ EVKITPADVAENLMPKSPLDD KCL +LI Sbjct: 3 MSEMWATMGSTLASFMFLWTIMRQYCPYGVQRFFEKYTHRIMSYFYPYIRISFHEYMGDRLKRSEAYAAVEAYLSANTSKSAKRLKAEMGKDSSNLVLTMDEYERVTDDYDGVKVWWVSNKVMSPTRSPMSYYPEQEKRFYKLTFHSKNRDTITESYLKHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFDTMAMEPEKKKEIIEDLVTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLAYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGDKSSWDEDEAEKDVIGRKEAKEEGGSSGCSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIQLSYCTFDGFKVLANNYLKLETHPLFDTIESLIGEVKITPADVAENLMPKSPLDDPHKCLSNLI 458 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098068 ID=g.barbadense_cottongen_reftransV1_0098068; Name=g.barbadense_cottongen_reftransV1_0098068; organism=Gossypium barbadense; type=contig; length=1928bpback to top |