g.barbadense_cottongen_reftransV1_0098068, g.barbadense_cottongen_reftransV1_0098068 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1B_DICDI (Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.012e-28 Identity = 85/247 (34.41%), Postives = 134/247 (54.25%), Query Frame = 1 Query: 571 LEHVVKEGKEIRVRNRQRK--LYTNSPGYKWPSYKQTMWSHIVFEHPA---TFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELT--AVKDNTELRKLLIETTSKSIIVIEDIDCSL-----DLTGQRKKKGGKAMADDXXX-XXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272 +++++E KE+ + + K +YT S G W F HP ++ L+ K + II+D+ F + ++Y G ++RGYLLYGPPGTGKS+ I A+A L + L L +V D T L +LL +SII++EDID ++ DL+ + +++ + + S +SG S +T SGLLN +DG+ ++ G R++ TTN++EKLD LIR GR+D IE+ C Sbjct: 165 FQNLIEEAKEMALEKEEGKTLIYT-SMGTDWRR----------FGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSD-TSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVSSGGSALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLC 397
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_SCHPO (Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.870e-25 Identity = 68/190 (35.79%), Postives = 108/190 (56.84%), Query Frame = 1 Query: 694 FEHPAT---FGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELT--AVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMD 1248 F HP + ++ LE + KK I +D+ F + ++Y G ++RGYLLYGPPG+GK++ + A+A L+YD+ L L + D+ L LL K+++++ED+D + Q +++ G+ ++ VT SGLLN +DG+ S+ ER+I TTN+ EKLDPAL+R GR+D Sbjct: 198 FGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDD-RLNHLLSNVPPKAVVLLEDVDSAF----QGRERSGEV-----------------GFHANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVD 363
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_XENLA (Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 5.939e-23 Identity = 63/189 (33.33%), Postives = 100/189 (52.91%), Query Frame = 1 Query: 718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDV-YDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSL---DLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272 ++ LE ++I++D+ F E+ ++Y+ G ++RGYLLYGPPG GKS+ I A+A L Y + + + L LL +SII++ED+D + DL Q + G ++T SGLLN +DG+ A R++ TTN++++LDPALIR GR+D + +C Sbjct: 190 SVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRDLNKQNP--------------------TAYQGMGRLTFSGLLNALDGV--ASTEARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHC 356
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1A_DICDI (Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum GN=bcs1la PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.426e-22 Identity = 67/187 (35.83%), Postives = 105/187 (56.15%), Query Frame = 1 Query: 709 TFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK-DNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELS 1266 + ++ L D K ++IED+ +F ++ +Y G ++RGYLLYG PG GKS++I A+A LN D+ + L++ D+ ++ LL KSI++IEDID + K+ D+ + + +T SGLLN +DG+ S G R++ TTN +E LD ALIR GR+D I++S Sbjct: 185 SLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAF-----------KSHRDNVDSNNNNSNNN-----NSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVS 353
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_DANRE (Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 3.452e-22 Identity = 62/187 (33.16%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELT--AVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272 ++ LE + I++D+ F + ++Y G ++RGYLLYGPPG GKS+ I A+A L Y + + L+ ++ D+ L LL +SII++ED+D + + A G ++T SGLLN +DG+ A R++ TTN++E+LDPAL+R GR+D + +C Sbjct: 190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDD-RLNHLLSVAPQQSIILLEDVDAAFVSRELLPTENPLAY----------------QGMGRLTFSGLLNALDGV--ASSEARIVFMTTNFIERLDPALVRPGRVDLKQYVGHC 357
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_YEAST (Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 3.949e-22 Identity = 72/230 (31.30%), Postives = 124/230 (53.91%), Query Frame = 1 Query: 571 LEHVVKEGKEIRVRNRQRK--LYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK-DNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVF-TTNYVEKLDPALIRRGRMD 1248 + ++ E K+I ++ + K +YT S G +W + Q ++ ++ L+ K+ I++D+ F ++ ++Y+ G ++RGYLLYGPPG+GK++ I A+A L+Y++ L L+ + L L+ +SI+++EDID + + Q ++G +S VT SGLLN +DG+ S+ E I F TTN+ EKLD A++R GR+D Sbjct: 184 FDDILNEAKDIALKTTEGKTVIYT-SFGPEWRKFGQPKAKRML-------PSVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAFNKRSQTGEQG---------------------FHSSVTFSGLLNALDGVTSS---EETITFMTTNHPEKLDAAIMRPGRID 381
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_BOVIN (Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.388e-21 Identity = 70/248 (28.23%), Postives = 117/248 (47.18%), Query Frame = 1 Query: 718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDV-YDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSL---DLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFD--AIDGLMKEVKITPADVAENLM-----PKSPLDDAE 1428 ++ LE + I+ D+ F ++ ++Y G ++RGYLLYGPPG GKS+ I A+A L + + + + L LL +S++++ED+D + DL + K G ++T SGLLN +DG+ A R++ TTN++++LDPALIR GR+D + +C + + + + L + A L +I+PA V M P + +AE Sbjct: 190 SVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAENPIK--------------------YQGLGRLTFSGLLNALDGV--ASTEARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPGQATSLAENFADRVLQATTQISPAQVQGYFMLYKNDPAGAIQNAE 415
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_MOUSE (Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.355e-20 Identity = 60/189 (31.75%), Postives = 97/189 (51.32%), Query Frame = 1 Query: 718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDV-YDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSL---DLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272 ++ L+ I++D+ F ++ ++Y G ++RGYLLYGPPG GKS+ I A+A L + + + + L LL +S++++ED+D + DL + K G ++T SGLLN +DG+ A R++ TTNY+++LDPALIR GR+D + YC Sbjct: 190 SVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPIK--------------------YQGLGRLTFSGLLNALDGV--ASTEARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYC 356
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_HUMAN (Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.164e-20 Identity = 60/189 (31.75%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDV-YDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSL---DLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272 ++ L+ I+ D+ F ++ ++Y G ++RGYLLYGPPG GKS+ I A+A L + + + + L LL +S++++ED+D + DL + K G ++T SGLLN +DG+ A R++ TTN+V++LDPALIR GR+D + YC Sbjct: 190 SVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVK--------------------YQGLGRLTFSGLLNALDGV--ASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYC 356
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: YL572_MIMIV (Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L572 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.633e-16 Identity = 56/152 (36.84%), Postives = 85/152 (55.92%), Query Frame = 1 Query: 865 MIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSK-SIIVIEDIDCSLDLTGQRKKKG---------------GKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272 MI A++ ++ L L ++D+ EL LL K +I+V+EDIDC+ + R K+ K +AD K+ ++V SK+TLSG+LN +DG++++ G R+++ TTN+ E LDPALIRRGR+D IE S C Sbjct: 1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEEETVVEKVTDDKSTLENKILADQLKKVEKV---------SKLTLSGILNSLDGIFNSEG--RIVIMTTNHSEVLDPALIRRGRIDMQIEFSNC 141
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: F6HV43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02060 PE=3 SV=1) HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0 Identity = 303/459 (66.01%), Postives = 368/459 (80.17%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGD--RLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQE-KRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXX--XXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPK--SPLDDAEKCLWSLIQAL 1458 M EM+ +GS A MF+WA+ RQY PY+LR Y EKY+H ++++ PYI+I++ EFT + R KRSEAY A+E YLSANSS AKRLKA++ KDS ++VLSMD++E+VTDEF+G K+WW ++K + +++YP + KRYY+LTFHK+YR++I G+YL HV+KEGK I VRNRQRKLYTN+P W YK+++WSH+ FEHPATF T+A+E KK+EI+ DL F KE+Y++IGKAWKRGYLL+GPPGTGKS+MIAAMANLLNYD+YDLELT+VKDNTELRKLLIETTSKSI+VIEDIDCSLDLTGQRKKK K D+E + K + G S SKVTLSGLLNFIDGLWSACG ERLIVFTTN+VEKLDPALIRRGRMDKHIELSYC FE FKVLAKNYL L++H LF +I L++E +TPADVAENLMPK S D CL +LIQAL Sbjct: 3 MAEMFAELGSLAAGAMFLWAMFRQYFPYQLRPYIEKYSHNLVSFVYPYIQITVQEFTENSFRRKRSEAYAAIENYLSANSSTRAKRLKADIVKDSQSVVLSMDDHEEVTDEFKGVKLWWASNKNPPPMQTISFYPAADGKRYYKLTFHKQYRDLIVGSYLNHVIKEGKAIAVRNRQRKLYTNNPSQNWYGYKKSVWSHVTFEHPATFETLAMESKKKEEIVNDLTIFRTRKEYYSKIGKAWKRGYLLHGPPGTGKSSMIAAMANLLNYDIYDLELTSVKDNTELRKLLIETTSKSILVIEDIDCSLDLTGQRKKKKEKEEEDEESKDNPILKKGKEGESKESKVTLSGLLNFIDGLWSACGEERLIVFTTNHVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEETNMTPADVAENLMPKSISTDDPGTACLENLIQAL 461
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: B9RUJ6_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0853490 PE=3 SV=1) HSP 1 Score: 608.601 bits (1568), Expect = 0.000e+0 Identity = 290/464 (62.50%), Postives = 364/464 (78.45%), Query Frame = 1 Query: 100 TMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPE-QEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQR----------KKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 ++ EMWT +GS IA MF WA+ +QY PY+ R Y ++YT ++ Y PY++I+ HE+TG+RLKRSE Y ++ YLSA SS TAKRLKA++ KD +L+LSMD++E++TDE+ G KVWW +SK ++ +++YPE +E+RY++LT H+R+R++IT +Y++HV+KEGK I +RNRQRKLYTN+P W +K + WSH+VFEHPATF T+ + KK+EI DL+ FS+ KE+YA+IGKAWKRGYLLYGPPGTGKSTMIAAMAN LNYDVYDLELT VKDN+ELRKLLIETTSKSIIVIEDIDCSLDLTGQR + D ++K+ E+ N G SKVTLSGLLNFIDG+WSACGGER+IVFTTNYVEKLDPALIRRGRMDKHIE+SYC FE FKVLAKNYL +E+H L+ I L++E +TPADVAENLMPKS +D + CL +LI AL Sbjct: 2 SIVEMWTNLGSAIAGIMFAWAMFQQYFPYQFRGYLDRYTRKLVAYVYPYLQITFHEYTGERLKRSELYANIQNYLSATSSTTAKRLKADVVKDGQSLILSMDDHEEITDEYNGIKVWWASSKTTPKSQTISWYPEAEERRYFKLTVHRRHRDIITTSYIDHVLKEGKTISIRNRQRKLYTNNPSQNWYGWKASKWSHVVFEHPATFDTLGMATKKKQEIKNDLIKFSKGKEYYAKIGKAWKRGYLLYGPPGTGKSTMIAAMANFLNYDVYDLELTTVKDNSELRKLLIETTSKSIIVIEDIDCSLDLTGQRKPKKEKDDDDDDNDDEKKKDPVSKKKKKDEDESNKG-SKVTLSGLLNFIDGIWSACGGERIIVFTTNYVEKLDPALIRRGRMDKHIEMSYCCFEAFKVLAKNYLDVESHELYGKISKLLEETNMTPADVAENLMPKSDEEDEDTCLKNLIAAL 464
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: F6HV47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02100 PE=3 SV=1) HSP 1 Score: 606.29 bits (1562), Expect = 0.000e+0 Identity = 297/454 (65.42%), Postives = 358/454 (78.85%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPE-QEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDD-AEKCLWSLIQAL 1458 M EMW GS +A MF+W + +QY P++ R Y EKY+ ++++ PYI+I+ EF+ DR KRSEAYVA+E YLS N+S AKRLKA++ KDS +LVLSMD+ E+VTDEF+G K+WW + K T+ ++YP EKR+Y+LTFHK +REM G+YL HV+KEGK I VRNRQRKLYTN+P KW Y++T+WSH+ FEHPA F T+A+EP KK+EI+ DL FS KE+Y++IGKAWKRGYLLYGPPGTGKSTMIAAMANLL+YD+YDLELT+VK NTELR LLIET +KSIIVIEDIDCSLDLTGQRKKK + +++K+ E+ G S SKVTLSGLLN IDGLWS CG ERLI+FTTNYVEKLDPALIRRGRMDKHIELSYC FE FKVLAKNYL L++H LF +I L++E +TPADVAENLMPKS D CL SLIQAL Sbjct: 1 MGEMWAKPGSLVAGAMFLWVMFQQYTPHQFRSYIEKYSQKLVSFVYPYIQITFQEFSEDRFKRSEAYVAIENYLSVNASTRAKRLKADVIKDSQSLVLSMDDREEVTDEFKGVKLWWASHKNPPKTQTFSFYPAADEKRFYKLTFHKNHREMFVGSYLNHVMKEGKAIEVRNRQRKLYTNNPSDKWHGYRRTLWSHVAFEHPARFETLAMEPKKKEEIVNDLTIFSRRKEYYSKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLDYDIYDLELTSVKSNTELRMLLIETRNKSIIVIEDIDCSLDLTGQRKKK-KETNEEEKKDPIRKMEKEGESKESKVTLSGLLNVIDGLWSTCGEERLIIFTTNYVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEETNMTPADVAENLMPKSVTGDPGTTCLESLIQAL 453
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: W9QX89_9ROSA (Putative mitochondrial chaperone BCS1-B OS=Morus notabilis GN=L484_010477 PE=3 SV=1) HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0 Identity = 292/457 (63.89%), Postives = 362/457 (79.21%), Query Frame = 1 Query: 109 EMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYP-EQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNS------GNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 + + +GS + MF WAI +QY PY+LR Y EKY+H ++ Y PYI++ ++FTG+RL RSEAY A++ YLS NSS AKRLKA++ K +LVLSMD++E+V D F+G K+WW + K T+ ++++P E+RYYRLTFHKR+R++I G YL+HV+KEGK I+VRNRQRKLYTN+ Y WSH+VFEHPATF T+A+EP+KKKEII+DL+ FS++++FYARIG+AWKRGYLLYGPPGTGKSTMIAAMANLLNYD+YDLELTAVKDNTELR+LLIET+SKSIIVIEDIDCSL+LTGQRKK+ K +D+ + + + + S S+VTLSGLLNFIDGLWSACGGERLIVFTTNY EKLDPALIR+GRMDKHIELSYCGFE FKVLAKNYL++E H LF I L+ + KITPADVAE+LMPK+ DAE L SL++ L Sbjct: 9 DTFAQLGSLVGGLMFFWAIFQQYFPYQLRTYLEKYSHRLVNYVYPYIQVRFNDFTGERLMRSEAYSAIQNYLSVNSSMQAKRLKADIVKKGQSLVLSMDDHEEVADVFKGVKLWWASGKNTPKTQSVSFFPTSDERRYYRLTFHKRHRDLIIGPYLKHVLKEGKAIKVRNRQRKLYTNNGAY---------WSHVVFEHPATFQTLAMEPEKKKEIIDDLIAFSQAEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLNYDIYDLELTAVKDNTELRRLLIETSSKSIIVIEDIDCSLELTGQRKKEKKKEKKEDQDQEGKDQNKEKPSKEDRDGKGSQVTLSGLLNFIDGLWSACGGERLIVFTTNYKEKLDPALIRKGRMDKHIELSYCGFEAFKVLAKNYLQVEEHSLFPTISNLLGDTKITPADVAEHLMPKTIFGDAEISLNSLVKGL 456
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: Q75NU0_TOBAC (Putative ATPase OS=Nicotiana tabacum GN=NtAAA1 PE=2 SV=1) HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0 Identity = 293/453 (64.68%), Postives = 360/453 (79.47%), Query Frame = 1 Query: 103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXX-XXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458 + + W +G++IASF+F+W +IR+YCP EL R +K+T I ++F P+I+ISI EF + LK +AY AVEAYLS + +K AK+L+AE LVLSMDE+E+VTDEF GAK+ W++ K+V R Y PE E++YY++TFHK+YR+M+T YLEHV+K GKEI++RNR+RKLYTN + +T WSHIVFEHPATF ++A+E +KK+EI++DL+ F ESK+FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL+YDVYDLELT+V+DNTELR+LL ET+SKSIIVIEDIDCSLDLTGQRKKK K + + K+ + S+VTLSGLLNFIDGLWSAC GER+IVFTTNYV+KLDPAL RRGRMDKHIELSYC FEGF+VLAKNYL L+ HPLF+ I+ LMKE KI PADVAE+LMP SP +DA KCL LI AL Sbjct: 7 LLQSWGGLGTSIASFIFMWDMIRRYCPPELIRASDKWTRRIRSFFYPFIQISISEFMSNNLKPHDAYAAVEAYLSVHLAKEAKKLRAETVHGGGKLVLSMDEHERVTDEFGGAKIQWISGKIVQ--RESKYLPEVERKYYKVTFHKKYRDMVTDTYLEHVIKTGKEIQMRNRKRKLYTNG-------HNKTTWSHIVFEHPATFDSLAMEAEKKREIVDDLLMFRESKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLDYDVYDLELTSVRDNTELRRLLAETSSKSIIVIEDIDCSLDLTGQRKKKQEKPPEEKTSKTKKEVPRKDTEESGSRVTLSGLLNFIDGLWSACSGERIIVFTTNYVDKLDPALTRRGRMDKHIELSYCSFEGFEVLAKNYLLLDEHPLFEPIEMLMKETKIIPADVAESLMPSSPKEDAGKCLLKLIDAL 450 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
Pagesback to top
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098068 ID=g.barbadense_cottongen_reftransV1_0098068; Name=g.barbadense_cottongen_reftransV1_0098068; organism=Gossypium barbadense; type=contig; length=1928bpback to top |