g.barbadense_cottongen_reftransV1_0098068, g.barbadense_cottongen_reftransV1_0098068 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0098068
Unique Nameg.barbadense_cottongen_reftransV1_0098068
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1928
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1B_DICDI (Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.012e-28
Identity = 85/247 (34.41%), Postives = 134/247 (54.25%), Query Frame = 1
Query:  571 LEHVVKEGKEIRVRNRQRK--LYTNSPGYKWPSYKQTMWSHIVFEHPA---TFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELT--AVKDNTELRKLLIETTSKSIIVIEDIDCSL-----DLTGQRKKKGGKAMADDXXX-XXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272
             +++++E KE+ +   + K  +YT S G  W            F HP       ++ L+  K + II+D+  F  + ++Y   G  ++RGYLLYGPPGTGKS+ I A+A  L   +  L L   +V D T L +LL     +SII++EDID ++     DL+ +       +++    + +      S +SG S +T SGLLN +DG+ ++ G  R++  TTN++EKLD  LIR GR+D  IE+  C
Sbjct:  165 FQNLIEEAKEMALEKEEGKTLIYT-SMGTDWRR----------FGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSD-TSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVSSGGSALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLC 397          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_SCHPO (Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.870e-25
Identity = 68/190 (35.79%), Postives = 108/190 (56.84%), Query Frame = 1
Query:  694 FEHPAT---FGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELT--AVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMD 1248
            F HP +     ++ LE + KK I +D+  F  + ++Y   G  ++RGYLLYGPPG+GK++ + A+A  L+YD+  L L    + D+  L  LL     K+++++ED+D +     Q +++ G+                    ++ VT SGLLN +DG+ S+   ER+I  TTN+ EKLDPAL+R GR+D
Sbjct:  198 FGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDD-RLNHLLSNVPPKAVVLLEDVDSAF----QGRERSGEV-----------------GFHANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVD 363          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_XENLA (Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.939e-23
Identity = 63/189 (33.33%), Postives = 100/189 (52.91%), Query Frame = 1
Query:  718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDV-YDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSL---DLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272
            ++ LE    ++I++D+  F E+ ++Y+  G  ++RGYLLYGPPG GKS+ I A+A  L Y +       +   +  L  LL     +SII++ED+D +    DL  Q                      +   G  ++T SGLLN +DG+  A    R++  TTN++++LDPALIR GR+D    + +C
Sbjct:  190 SVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRDLNKQNP--------------------TAYQGMGRLTFSGLLNALDGV--ASTEARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHC 356          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1A_DICDI (Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum GN=bcs1la PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.426e-22
Identity = 67/187 (35.83%), Postives = 105/187 (56.15%), Query Frame = 1
Query:  709 TFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK-DNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELS 1266
            +  ++ L  D K ++IED+ +F  ++ +Y   G  ++RGYLLYG PG GKS++I A+A  LN D+  + L++   D+ ++  LL     KSI++IEDID +            K+  D+          +     + +T SGLLN +DG+ S  G  R++  TTN +E LD ALIR GR+D  I++S
Sbjct:  185 SLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAF-----------KSHRDNVDSNNNNSNNN-----NSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVS 353          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_DANRE (Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 3.452e-22
Identity = 62/187 (33.16%), Postives = 100/187 (53.48%), Query Frame = 1
Query:  718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELT--AVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272
            ++ LE    + I++D+  F  + ++Y   G  ++RGYLLYGPPG GKS+ I A+A  L Y +  + L+  ++ D+  L  LL     +SII++ED+D +         +   A                  G  ++T SGLLN +DG+  A    R++  TTN++E+LDPAL+R GR+D    + +C
Sbjct:  190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDD-RLNHLLSVAPQQSIILLEDVDAAFVSRELLPTENPLAY----------------QGMGRLTFSGLLNALDGV--ASSEARIVFMTTNFIERLDPALVRPGRVDLKQYVGHC 357          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_YEAST (Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 3.949e-22
Identity = 72/230 (31.30%), Postives = 124/230 (53.91%), Query Frame = 1
Query:  571 LEHVVKEGKEIRVRNRQRK--LYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVK-DNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVF-TTNYVEKLDPALIRRGRMD 1248
             + ++ E K+I ++  + K  +YT S G +W  + Q     ++        ++ L+   K+ I++D+  F ++ ++Y+  G  ++RGYLLYGPPG+GK++ I A+A  L+Y++  L L+     +  L  L+     +SI+++EDID + +   Q  ++G                      +S VT SGLLN +DG+ S+   E  I F TTN+ EKLD A++R GR+D
Sbjct:  184 FDDILNEAKDIALKTTEGKTVIYT-SFGPEWRKFGQPKAKRML-------PSVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAFNKRSQTGEQG---------------------FHSSVTFSGLLNALDGVTSS---EETITFMTTNHPEKLDAAIMRPGRID 381          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_BOVIN (Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.388e-21
Identity = 70/248 (28.23%), Postives = 117/248 (47.18%), Query Frame = 1
Query:  718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDV-YDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSL---DLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFD--AIDGLMKEVKITPADVAENLM-----PKSPLDDAE 1428
            ++ LE    + I+ D+  F ++ ++Y   G  ++RGYLLYGPPG GKS+ I A+A  L + +       +   +  L  LL     +S++++ED+D +    DL  +   K                      G  ++T SGLLN +DG+  A    R++  TTN++++LDPALIR GR+D    + +C       + + +   +   L +  A   L    +I+PA V    M     P   + +AE
Sbjct:  190 SVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAENPIK--------------------YQGLGRLTFSGLLNALDGV--ASTEARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPGQATSLAENFADRVLQATTQISPAQVQGYFMLYKNDPAGAIQNAE 415          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_MOUSE (Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.355e-20
Identity = 60/189 (31.75%), Postives = 97/189 (51.32%), Query Frame = 1
Query:  718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDV-YDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSL---DLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272
            ++ L+      I++D+  F ++ ++Y   G  ++RGYLLYGPPG GKS+ I A+A  L + +       +   +  L  LL     +S++++ED+D +    DL  +   K                      G  ++T SGLLN +DG+  A    R++  TTNY+++LDPALIR GR+D    + YC
Sbjct:  190 SVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPIK--------------------YQGLGRLTFSGLLNALDGV--ASTEARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYC 356          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: BCS1_HUMAN (Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.164e-20
Identity = 60/189 (31.75%), Postives = 96/189 (50.79%), Query Frame = 1
Query:  718 TMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDV-YDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSL---DLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272
            ++ L+      I+ D+  F ++ ++Y   G  ++RGYLLYGPPG GKS+ I A+A  L + +       +   +  L  LL     +S++++ED+D +    DL  +   K                      G  ++T SGLLN +DG+  A    R++  TTN+V++LDPALIR GR+D    + YC
Sbjct:  190 SVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVK--------------------YQGLGRLTFSGLLNALDGV--ASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYC 356          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Match: YL572_MIMIV (Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L572 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.633e-16
Identity = 56/152 (36.84%), Postives = 85/152 (55.92%), Query Frame = 1
Query:  865 MIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSK-SIIVIEDIDCSLDLTGQRKKKG---------------GKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYC 1272
            MI A++      ++ L L  ++D+ EL  LL     K +I+V+EDIDC+ +    R K+                 K +AD  K+ ++V         SK+TLSG+LN +DG++++ G  R+++ TTN+ E LDPALIRRGR+D  IE S C
Sbjct:    1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEEETVVEKVTDDKSTLENKILADQLKKVEKV---------SKLTLSGILNSLDGIFNSEG--RIVIMTTNHSEVLDPALIRRGRIDMQIEFSNC 141          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: F6HV43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02060 PE=3 SV=1)

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 303/459 (66.01%), Postives = 368/459 (80.17%), Query Frame = 1
Query:  103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGD--RLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQE-KRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXX--XXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPK--SPLDDAEKCLWSLIQAL 1458
            M EM+  +GS  A  MF+WA+ RQY PY+LR Y EKY+H ++++  PYI+I++ EFT +  R KRSEAY A+E YLSANSS  AKRLKA++ KDS ++VLSMD++E+VTDEF+G K+WW ++K     + +++YP  + KRYY+LTFHK+YR++I G+YL HV+KEGK I VRNRQRKLYTN+P   W  YK+++WSH+ FEHPATF T+A+E  KK+EI+ DL  F   KE+Y++IGKAWKRGYLL+GPPGTGKS+MIAAMANLLNYD+YDLELT+VKDNTELRKLLIETTSKSI+VIEDIDCSLDLTGQRKKK  K   D+E +      K + G S  SKVTLSGLLNFIDGLWSACG ERLIVFTTN+VEKLDPALIRRGRMDKHIELSYC FE FKVLAKNYL L++H LF +I  L++E  +TPADVAENLMPK  S  D    CL +LIQAL
Sbjct:    3 MAEMFAELGSLAAGAMFLWAMFRQYFPYQLRPYIEKYSHNLVSFVYPYIQITVQEFTENSFRRKRSEAYAAIENYLSANSSTRAKRLKADIVKDSQSVVLSMDDHEEVTDEFKGVKLWWASNKNPPPMQTISFYPAADGKRYYKLTFHKQYRDLIVGSYLNHVIKEGKAIAVRNRQRKLYTNNPSQNWYGYKKSVWSHVTFEHPATFETLAMESKKKEEIVNDLTIFRTRKEYYSKIGKAWKRGYLLHGPPGTGKSSMIAAMANLLNYDIYDLELTSVKDNTELRKLLIETTSKSILVIEDIDCSLDLTGQRKKKKEKEEEDEESKDNPILKKGKEGESKESKVTLSGLLNFIDGLWSACGEERLIVFTTNHVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEETNMTPADVAENLMPKSISTDDPGTACLENLIQAL 461          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: B9RUJ6_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0853490 PE=3 SV=1)

HSP 1 Score: 608.601 bits (1568), Expect = 0.000e+0
Identity = 290/464 (62.50%), Postives = 364/464 (78.45%), Query Frame = 1
Query:  100 TMTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPE-QEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQR----------KKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458
            ++ EMWT +GS IA  MF WA+ +QY PY+ R Y ++YT  ++ Y  PY++I+ HE+TG+RLKRSE Y  ++ YLSA SS TAKRLKA++ KD  +L+LSMD++E++TDE+ G KVWW +SK    ++ +++YPE +E+RY++LT H+R+R++IT +Y++HV+KEGK I +RNRQRKLYTN+P   W  +K + WSH+VFEHPATF T+ +   KK+EI  DL+ FS+ KE+YA+IGKAWKRGYLLYGPPGTGKSTMIAAMAN LNYDVYDLELT VKDN+ELRKLLIETTSKSIIVIEDIDCSLDLTGQR               +   D   ++K+  E+  N G SKVTLSGLLNFIDG+WSACGGER+IVFTTNYVEKLDPALIRRGRMDKHIE+SYC FE FKVLAKNYL +E+H L+  I  L++E  +TPADVAENLMPKS  +D + CL +LI AL
Sbjct:    2 SIVEMWTNLGSAIAGIMFAWAMFQQYFPYQFRGYLDRYTRKLVAYVYPYLQITFHEYTGERLKRSELYANIQNYLSATSSTTAKRLKADVVKDGQSLILSMDDHEEITDEYNGIKVWWASSKTTPKSQTISWYPEAEERRYFKLTVHRRHRDIITTSYIDHVLKEGKTISIRNRQRKLYTNNPSQNWYGWKASKWSHVVFEHPATFDTLGMATKKKQEIKNDLIKFSKGKEYYAKIGKAWKRGYLLYGPPGTGKSTMIAAMANFLNYDVYDLELTTVKDNSELRKLLIETTSKSIIVIEDIDCSLDLTGQRKPKKEKDDDDDDNDDEKKKDPVSKKKKKDEDESNKG-SKVTLSGLLNFIDGIWSACGGERIIVFTTNYVEKLDPALIRRGRMDKHIEMSYCCFEAFKVLAKNYLDVESHELYGKISKLLEETNMTPADVAENLMPKSDEEDEDTCLKNLIAAL 464          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: F6HV47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02100 PE=3 SV=1)

HSP 1 Score: 606.29 bits (1562), Expect = 0.000e+0
Identity = 297/454 (65.42%), Postives = 358/454 (78.85%), Query Frame = 1
Query:  103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPE-QEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDD-AEKCLWSLIQAL 1458
            M EMW   GS +A  MF+W + +QY P++ R Y EKY+  ++++  PYI+I+  EF+ DR KRSEAYVA+E YLS N+S  AKRLKA++ KDS +LVLSMD+ E+VTDEF+G K+WW + K    T+  ++YP   EKR+Y+LTFHK +REM  G+YL HV+KEGK I VRNRQRKLYTN+P  KW  Y++T+WSH+ FEHPA F T+A+EP KK+EI+ DL  FS  KE+Y++IGKAWKRGYLLYGPPGTGKSTMIAAMANLL+YD+YDLELT+VK NTELR LLIET +KSIIVIEDIDCSLDLTGQRKKK  +   +++K+     E+ G S  SKVTLSGLLN IDGLWS CG ERLI+FTTNYVEKLDPALIRRGRMDKHIELSYC FE FKVLAKNYL L++H LF +I  L++E  +TPADVAENLMPKS   D    CL SLIQAL
Sbjct:    1 MGEMWAKPGSLVAGAMFLWVMFQQYTPHQFRSYIEKYSQKLVSFVYPYIQITFQEFSEDRFKRSEAYVAIENYLSVNASTRAKRLKADVIKDSQSLVLSMDDREEVTDEFKGVKLWWASHKNPPKTQTFSFYPAADEKRFYKLTFHKNHREMFVGSYLNHVMKEGKAIEVRNRQRKLYTNNPSDKWHGYRRTLWSHVAFEHPARFETLAMEPKKKEEIVNDLTIFSRRKEYYSKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLDYDIYDLELTSVKSNTELRMLLIETRNKSIIVIEDIDCSLDLTGQRKKK-KETNEEEKKDPIRKMEKEGESKESKVTLSGLLNVIDGLWSTCGEERLIIFTTNYVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEETNMTPADVAENLMPKSVTGDPGTTCLESLIQAL 453          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: W9QX89_9ROSA (Putative mitochondrial chaperone BCS1-B OS=Morus notabilis GN=L484_010477 PE=3 SV=1)

HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0
Identity = 292/457 (63.89%), Postives = 362/457 (79.21%), Query Frame = 1
Query:  109 EMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYP-EQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXXXXSGNS------GNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458
            + +  +GS +   MF WAI +QY PY+LR Y EKY+H ++ Y  PYI++  ++FTG+RL RSEAY A++ YLS NSS  AKRLKA++ K   +LVLSMD++E+V D F+G K+WW + K    T+ ++++P   E+RYYRLTFHKR+R++I G YL+HV+KEGK I+VRNRQRKLYTN+  Y         WSH+VFEHPATF T+A+EP+KKKEII+DL+ FS++++FYARIG+AWKRGYLLYGPPGTGKSTMIAAMANLLNYD+YDLELTAVKDNTELR+LLIET+SKSIIVIEDIDCSL+LTGQRKK+  K   +D+ +  + + +   S        S+VTLSGLLNFIDGLWSACGGERLIVFTTNY EKLDPALIR+GRMDKHIELSYCGFE FKVLAKNYL++E H LF  I  L+ + KITPADVAE+LMPK+   DAE  L SL++ L
Sbjct:    9 DTFAQLGSLVGGLMFFWAIFQQYFPYQLRTYLEKYSHRLVNYVYPYIQVRFNDFTGERLMRSEAYSAIQNYLSVNSSMQAKRLKADIVKKGQSLVLSMDDHEEVADVFKGVKLWWASGKNTPKTQSVSFFPTSDERRYYRLTFHKRHRDLIIGPYLKHVLKEGKAIKVRNRQRKLYTNNGAY---------WSHVVFEHPATFQTLAMEPEKKKEIIDDLIAFSQAEDFYARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLNYDIYDLELTAVKDNTELRRLLIETSSKSIIVIEDIDCSLELTGQRKKEKKKEKKEDQDQEGKDQNKEKPSKEDRDGKGSQVTLSGLLNFIDGLWSACGGERLIVFTTNYKEKLDPALIRKGRMDKHIELSYCGFEAFKVLAKNYLQVEEHSLFPTISNLLGDTKITPADVAEHLMPKTIFGDAEISLNSLVKGL 456          
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Match: Q75NU0_TOBAC (Putative ATPase OS=Nicotiana tabacum GN=NtAAA1 PE=2 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 293/453 (64.68%), Postives = 360/453 (79.47%), Query Frame = 1
Query:  103 MTEMWTTMGSTIASFMFIWAIIRQYCPYELRRYFEKYTHTIMTYFSPYIKISIHEFTGDRLKRSEAYVAVEAYLSANSSKTAKRLKAEMGKDSNNLVLSMDEYEKVTDEFRGAKVWWVASKVVSATRPMAYYPEQEKRYYRLTFHKRYREMITGAYLEHVVKEGKEIRVRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFGTMALEPDKKKEIIEDLVTFSESKEFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGKAMADDXXXXXXXX-XXSGNSGNSKVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCGFEGFKVLAKNYLKLETHPLFDAIDGLMKEVKITPADVAENLMPKSPLDDAEKCLWSLIQAL 1458
            + + W  +G++IASF+F+W +IR+YCP EL R  +K+T  I ++F P+I+ISI EF  + LK  +AY AVEAYLS + +K AK+L+AE       LVLSMDE+E+VTDEF GAK+ W++ K+V   R   Y PE E++YY++TFHK+YR+M+T  YLEHV+K GKEI++RNR+RKLYTN        + +T WSHIVFEHPATF ++A+E +KK+EI++DL+ F ESK+FYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLL+YDVYDLELT+V+DNTELR+LL ET+SKSIIVIEDIDCSLDLTGQRKKK  K   +   + K+    +      S+VTLSGLLNFIDGLWSAC GER+IVFTTNYV+KLDPAL RRGRMDKHIELSYC FEGF+VLAKNYL L+ HPLF+ I+ LMKE KI PADVAE+LMP SP +DA KCL  LI AL
Sbjct:    7 LLQSWGGLGTSIASFIFMWDMIRRYCPPELIRASDKWTRRIRSFFYPFIQISISEFMSNNLKPHDAYAAVEAYLSVHLAKEAKKLRAETVHGGGKLVLSMDEHERVTDEFGGAKIQWISGKIVQ--RESKYLPEVERKYYKVTFHKKYRDMVTDTYLEHVIKTGKEIQMRNRKRKLYTNG-------HNKTTWSHIVFEHPATFDSLAMEAEKKREIVDDLLMFRESKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLDYDVYDLELTSVRDNTELRRLLAETSSKSIIVIEDIDCSLDLTGQRKKKQEKPPEEKTSKTKKEVPRKDTEESGSRVTLSGLLNFIDGLWSACSGERIIVFTTNYVDKLDPALTRRGRMDKHIELSYCSFEGFEVLAKNYLLLDEHPLFEPIEMLMKETKIIPADVAESLMPSSPKEDAGKCLLKLIDAL 450          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
BCS1B_DICDI1.012e-2834.41Probable mitochondrial chaperone BCS1-B OS=Dictyos... [more]
BCS1_SCHPO3.870e-2535.79Probable mitochondrial chaperone bcs1 OS=Schizosac... [more]
BCS1_XENLA5.939e-2333.33Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=... [more]
BCS1A_DICDI1.426e-2235.83Probable mitochondrial chaperone BCS1-A OS=Dictyos... [more]
BCS1_DANRE3.452e-2233.16Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs... [more]
BCS1_YEAST3.949e-2231.30Mitochondrial chaperone BCS1 OS=Saccharomyces cere... [more]
BCS1_BOVIN5.388e-2128.23Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1... [more]
BCS1_MOUSE1.355e-2031.75Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bc... [more]
BCS1_HUMAN2.164e-2031.75Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BC... [more]
YL572_MIMIV2.633e-1636.84Putative AAA family ATPase L572 OS=Acanthamoeba po... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0098068 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
F6HV43_VITVI0.000e+066.01Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RUJ6_RICCO0.000e+062.50ATP binding protein, putative OS=Ricinus communis ... [more]
F6HV47_VITVI0.000e+065.42Putative uncharacterized protein OS=Vitis vinifera... [more]
W9QX89_9ROSA0.000e+063.89Putative mitochondrial chaperone BCS1-B OS=Morus n... [more]
Q75NU0_TOBAC0.000e+064.68Putative ATPase OS=Nicotiana tabacum GN=NtAAA1 PE=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 446..484
NoneNo IPR availablePANTHERPTHR23070:SF42SUBFAMILY NOT NAMEDcoord: 1..478
NoneNo IPR availablePANTHERPTHR23070BCS1 AAA-TYPE ATPASEcoord: 1..478
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..501
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 13..30
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 246..399
e-value: 3.8E-9
score: 46.4
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 251..396
e-value: 2.7E-15
score: 56.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 227..393
e-value: 7.7E-38
score: 129.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 107..462
IPR025753AAA-type ATPase, N-terminal domainPFAMPF14363AAA_assoccoord: 35..127
e-value: 7.3E-25
score: 87.0
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 367..386

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0098068 ID=g.barbadense_cottongen_reftransV1_0098068; Name=g.barbadense_cottongen_reftransV1_0098068; organism=Gossypium barbadense; type=contig; length=1928bp
ATCTGCTTACGCAGAAAGGCTACTTTAAAAAGCAAAGAGCAAGGAGTTTG
CAATAAGCCGAGAGCAAAAAAGAAAAAACTGATGGAGATGGTGCCTTCAA
CAATGACAGAGATGTGGACGACAATGGGTTCAACCATTGCCAGTTTCATG
TTCATATGGGCTATTATTCGTCAATATTGCCCTTACGAACTCCGCCGTTA
CTTCGAAAAATACACTCACACCATCATGACCTATTTCTCCCCTTACATCA
AAATCTCCATCCACGAATTCACCGGCGATCGCCTCAAACGCAGCGAGGCT
TACGTCGCCGTTGAAGCTTATCTCAGCGCCAACTCTTCCAAAACAGCTAA
AAGGTTAAAAGCCGAGATGGGAAAAGACAGCAACAACTTAGTTCTCAGCA
TGGACGAATACGAGAAAGTAACCGACGAGTTCCGAGGAGCTAAAGTATGG
TGGGTAGCGAGCAAAGTGGTGTCAGCTACTCGGCCCATGGCGTATTATCC
CGAACAGGAGAAAAGGTATTACAGGCTCACTTTTCATAAACGGTACAGAG
AGATGATAACCGGTGCTTATTTAGAACATGTAGTGAAAGAAGGGAAGGAA
ATTAGAGTGAGGAACAGGCAAAGGAAGCTTTACACAAACAGTCCAGGTTA
TAAATGGCCGAGTTATAAACAAACCATGTGGAGTCACATCGTGTTTGAAC
ATCCAGCTACGTTTGGAACAATGGCGTTGGAACCAGATAAGAAGAAAGAG
ATTATTGAAGATCTTGTTACTTTTAGTGAAAGTAAAGAGTTTTATGCTAG
GATTGGTAAAGCTTGGAAACGTGGGTATCTTCTTTATGGACCACCAGGGA
CTGGGAAATCAACTATGATTGCTGCAATGGCGAATTTGTTGAATTATGAT
GTTTATGATCTTGAACTCACTGCTGTTAAAGATAATACTGAGTTAAGGAA
GCTTTTGATTGAGACAACGAGTAAGTCTATTATAGTGATTGAAGATATAG
ATTGTTCACTTGATCTTACTGGTCAAAGGAAGAAAAAAGGCGGGAAAGCT
ATGGCGGATGATGAGAAAGAGAGGAAAGAGGTAAAAGAAGAAAGTGGTAA
TAGTGGTAACAGCAAAGTGACGCTTTCGGGTTTATTGAATTTTATCGATG
GGCTTTGGTCTGCTTGTGGTGGGGAGAGGTTGATTGTTTTTACTACTAAT
TATGTGGAGAAACTTGATCCTGCATTGATAAGACGGGGCAGGATGGATAA
ACATATTGAGCTTTCTTATTGTGGGTTTGAAGGGTTCAAGGTGCTTGCTA
AGAATTATTTGAAATTGGAAACTCATCCATTGTTTGATGCCATTGATGGG
TTGATGAAAGAGGTTAAGATTACACCTGCTGATGTTGCTGAGAATCTTAT
GCCTAAGTCTCCATTAGATGATGCTGAGAAATGTCTGTGGAGCTTGATTC
AGGCTCTTGAGGAAGCTAAGGAAGAAGCTGAAGCTGAAGCTGAAGCTGCG
ACTGCCAAGAAGGTTGTAGAGCAAAGTCAGGATGGTGGTGGTGTATGCAG
TGAAAATTGTATGGCAGAGAAGGCTTCAGAGTGAGCCAAATTCCAGATTG
ATTTTTAGTGGATTACAGATTCGTGGGCGTGATTGTTAGAAGGGATTCTA
TTTTAGCTGTTAAAAGCAAAGGGTATGTGAGCGCATCAGATTGGAATTTA
TTAGTGTTAATAATAACATAAGCTGTTTTATTTAACAAAACTTGAGCATG
CTATGGATGTTCATTAACTGTAGGAAAACAAGATGCATACATACATACAT
ACATCAATGGCAGAAAATTTGAAGTACTGAATGATCAAAAGGAAATTAAT
GCATTCATACATACATACCAATGGGCCCTGGACTATGTTCTAGGATATAG
GAACAACTCAAAATCTTAAGAAACTATA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
IPR025753AAA_N_dom
IPR003960ATPase_AAA_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding