g.barbadense_cottongen_reftransV1_0098060, g.barbadense_cottongen_reftransV1_0098060 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0098060
Unique Nameg.barbadense_cottongen_reftransV1_0098060
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3566
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: KMT2B_HUMAN (Histone-lysine N-methyltransferase 2B OS=Homo sapiens GN=KMT2B PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 5.521e-7
Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 2
Query: 2036 QCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAI-NLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLH 2389
            QCA CL   + ++       Y G +             +H NC  W+  V+ END ++ N+ A ++R R+++C  C   GA +GC   SC   FH  CA+  S C +  D+  + C  H
Sbjct: 1580 QCALCLKYGDADSKEAGRLLYIGQNE-----------WTHVNCAIWSAEVFEENDGSLKNVHAAVARGRQMRCELCLKPGATVGCCLSSCLSNFHFMCAR-ASYCIFQ-DDKKVFCQKH 1685          
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: PHF11_BOVIN (PHD finger protein 11 OS=Bos taurus GN=PHF11 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 9.777e-7
Identity = 38/113 (33.63%), Postives = 57/113 (50.44%), Query Frame = 2
Query: 2123 YNGGSKVIHSHKNCTEWAPNVY-------FENDKAINLEA---ELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAK---LVSQCRWDVDNFVILCPLHASSK--LPNEK 2416
            Y   S+ I +H+NC  ++  +          ND+  ++E+   E+ R RK+KC+ CG KGA +GC  KSC K +H  CAK    V Q       + + C  HA  +  LP+ K
Sbjct:   58 YFAQSENIAAHENCLLYSSALVECEDYDPSNNDRNFDVESVKKEIKRGRKLKCTFCGKKGATVGCDLKSCFKNYHFFCAKNDHAVLQADGRTGIYKVFCQQHADPQNDLPSVK 170          
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: V7BPN4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G167200g PE=4 SV=1)

HSP 1 Score: 535.028 bits (1377), Expect = 2.600e-166
Identity = 255/416 (61.30%), Postives = 312/416 (75.00%), Query Frame = 2
Query: 1955 SESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202
            +++S  K   L +   L KCE++    QC FCLS EE+E SG MVHY +G  VP DY GG KV H H+NCTEWAPNVYF+ D AINLEAE+SRSR+I+CS CGLKGAALGCYEKSCR++FHVPCAK  S CRWD  NFV+LCPLHASS LP E S SQ     R+ +G      N  P  D  + ++      S  K+VLCCS L+V+EKEI+S+FE ++ VTVLK WDS++TH+IAST+ENGAC+RTLK+LMGILEGKWIL ++W+KAC+K M  V E +YEI +DVHGIRDGPRLGRLR+ NKQPKLFDG KFY MGDF PSYKG LQD+++AAGG ILHRKP+SGD  + LL +  +   IIYS+ELP KC PS    I  +R  +AE LASSTG+K  +N+W+L+SI+ACKL
Sbjct:  691 NDASKEKHCSLTDKTVLRKCESLVKSYQCLFCLSSEESEVSGPMVHYLDGKPVPADYEGGFKVTHCHRNCTEWAPNVYFDGDNAINLEAEISRSRRIRCSFCGLKGAALGCYEKSCRRSFHVPCAKWTSLCRWDTQNFVMLCPLHASSMLPCEGSGSQ----ERSKKGPGRDGKNHGPSLD--TTRQTRADHRSYKKIVLCCSALSVQEKEIVSKFESVSKVTVLKNWDSSVTHVIASTEENGACRRTLKVLMGILEGKWILKVEWIKACMKEMNPVGEERYEINVDVHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFIPSYKGYLQDLVVAAGGIILHRKPVSGDQKSMLLDTHPYQTLIIYSLELPDKCKPSNTDTICRQRCHDAEVLASSTGSKVATNTWILNSIAACKL 1100          

HSP 2 Score: 219.935 bits (559), Expect = 2.998e-65
Identity = 133/269 (49.44%), Postives = 161/269 (59.85%), Query Frame = 2
Query:  329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTSADSGKRVKNDLNCCERMDNQGANKGR------------GSREAKSTETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENNLG---EKGEQILSPFFWLREE-DVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSKEEVHGNRDH---LNLFDSEMFEWTQGACSPELLSSPDKMQVADTYE 1078
            CI+KSMKS   CPVCK+P  RREVRPAPHMDNLVSIYK+MEVASG NIFVTQ+      +D  K+ + + +   +++  G++KG                   + E+S     KPSFP  KRV VPQ  LSET M   K G  L E  +++  +    + E+      EK   +LSPFFWLREE D E  SQ +D DQ +  + P  PSFSD+KDSDDE  S       R H   +NLFDSEMFEWTQ  CSPEL SSP KMQV DTYE
Sbjct:   36 CIVKSMKSAFACPVCKIPFTRREVRPAPHMDNLVSIYKNMEVASGINIFVTQNVSQGKLSDVEKQCEGNAD-SGKVEAGGSHKGHVQEKKTRKIKKVKKTVQTNMESSGSGFAKPSFPAKKRVLVPQNILSETPMKNLKLGDSLNEFNKEKEGVEKVSVMESERPLQIEKSVPVLSPFFWLREEKDGETLSQPADEDQIIDCSTPNPPSFSDLKDSDDEHTSNVAPFDERQHQISVNLFDSEMFEWTQRPCSPELFSSPSKMQVMDTYE 303          

HSP 3 Score: 59.3066 bits (142), Expect = 2.998e-65
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 3
Query:  102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209
            MGD   LE+MG+ELKCPIC SL +SAVSLTCNH+FC
Sbjct:    1 MGD---LERMGKELKCPICWSLFDSAVSLTCNHLFC 33          
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: V7BSD2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G167200g PE=4 SV=1)

HSP 1 Score: 535.028 bits (1377), Expect = 2.648e-166
Identity = 255/416 (61.30%), Postives = 312/416 (75.00%), Query Frame = 2
Query: 1955 SESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202
            +++S  K   L +   L KCE++    QC FCLS EE+E SG MVHY +G  VP DY GG KV H H+NCTEWAPNVYF+ D AINLEAE+SRSR+I+CS CGLKGAALGCYEKSCR++FHVPCAK  S CRWD  NFV+LCPLHASS LP E S SQ     R+ +G      N  P  D  + ++      S  K+VLCCS L+V+EKEI+S+FE ++ VTVLK WDS++TH+IAST+ENGAC+RTLK+LMGILEGKWIL ++W+KAC+K M  V E +YEI +DVHGIRDGPRLGRLR+ NKQPKLFDG KFY MGDF PSYKG LQD+++AAGG ILHRKP+SGD  + LL +  +   IIYS+ELP KC PS    I  +R  +AE LASSTG+K  +N+W+L+SI+ACKL
Sbjct:  693 NDASKEKHCSLTDKTVLRKCESLVKSYQCLFCLSSEESEVSGPMVHYLDGKPVPADYEGGFKVTHCHRNCTEWAPNVYFDGDNAINLEAEISRSRRIRCSFCGLKGAALGCYEKSCRRSFHVPCAKWTSLCRWDTQNFVMLCPLHASSMLPCEGSGSQ----ERSKKGPGRDGKNHGPSLD--TTRQTRADHRSYKKIVLCCSALSVQEKEIVSKFESVSKVTVLKNWDSSVTHVIASTEENGACRRTLKVLMGILEGKWILKVEWIKACMKEMNPVGEERYEINVDVHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFIPSYKGYLQDLVVAAGGIILHRKPVSGDQKSMLLDTHPYQTLIIYSLELPDKCKPSNTDTICRQRCHDAEVLASSTGSKVATNTWILNSIAACKL 1102          

HSP 2 Score: 215.312 bits (547), Expect = 8.992e-64
Identity = 133/271 (49.08%), Postives = 161/271 (59.41%), Query Frame = 2
Query:  329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTSADSGKRVKNDLNCCERMDNQGANKGR------------GSREAKSTETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENNLG---EKGEQILSPFFWLREE-DVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSKEEVHGNRDH---LNLFDSEMFEWTQGACSPELLSSPDKM--QVADTYE 1078
            CI+KSMKS   CPVCK+P  RREVRPAPHMDNLVSIYK+MEVASG NIFVTQ+      +D  K+ + + +   +++  G++KG                   + E+S     KPSFP  KRV VPQ  LSET M   K G  L E  +++  +    + E+      EK   +LSPFFWLREE D E  SQ +D DQ +  + P  PSFSD+KDSDDE  S       R H   +NLFDSEMFEWTQ  CSPEL SSP KM  QV DTYE
Sbjct:   36 CIVKSMKSAFACPVCKIPFTRREVRPAPHMDNLVSIYKNMEVASGINIFVTQNVSQGKLSDVEKQCEGNAD-SGKVEAGGSHKGHVQEKKTRKIKKVKKTVQTNMESSGSGFAKPSFPAKKRVLVPQNILSETPMKNLKLGDSLNEFNKEKEGVEKVSVMESERPLQIEKSVPVLSPFFWLREEKDGETLSQPADEDQIIDCSTPNPPSFSDLKDSDDEHTSNVAPFDERQHQISVNLFDSEMFEWTQRPCSPELFSSPSKMQLQVMDTYE 305          

HSP 3 Score: 59.6918 bits (143), Expect = 8.992e-64
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 3
Query:  102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209
            MGD   LE+MG+ELKCPIC SL +SAVSLTCNH+FC
Sbjct:    1 MGD---LERMGKELKCPICWSLFDSAVSLTCNHLFC 33          
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: K7MAH0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 537.724 bits (1384), Expect = 3.426e-164
Identity = 257/419 (61.34%), Postives = 314/419 (74.94%), Query Frame = 2
Query: 1955 SESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKR---RNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202
            +++S  K  PL +  AL KCE+   K QC FCLS EE+E SG MVHY +G  V  DY GGSKV H H+NCTEWAPNVYF+ D AINLEAE+SRSR+IKCS CGLKGAALGCYEKSCR++FHVPCA   SQCRWD  NFV+LCPLHASS LP E S SQ   K+      +   L H      N   +  + +       K+VLCCS L+V+E+E++SEFE+++   VLK WDS++TH+IASTDENGAC+RTLK+L+GILEGKWILNI+W+KAC+K M  VDE +YEI +D+HGIRDGPRLGRLR+ NKQPKLF G KFY+MGDF PSYKG LQD+L+AAGG ILHRKP+SGD  +    +  +   IIYS+ELP KC P KK  I S+R+ +AE LASSTG+K  SN+W+L+SI+ACKL
Sbjct: 1012 NDTSKEKHCPLMDQTALRKCESHVTKYQCIFCLSSEESETSGPMVHYLDGRPVTADYEGGSKVTHCHRNCTEWAPNVYFDGDNAINLEAEISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCANWTSQCRWDTQNFVMLCPLHASSMLPCEGSGSQKRSKKCAASEGKNHGLKHDT---TNQSRAAHRSYK------KIVLCCSALSVQEREVVSEFERVSKAAVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGPVDEERYEINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYVMGDFIPSYKGYLQDLLVAAGGIILHRKPVSGDQESTSPDTHPYQTLIIYSLELPDKCKPLKKDTICSQRRHDAEVLASSTGSKVASNTWILNSIAACKL 1421          

HSP 2 Score: 233.032 bits (593), Expect = 2.004e-68
Identity = 138/270 (51.11%), Postives = 167/270 (61.85%), Query Frame = 2
Query:  329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTSADSGKRVKNDLNCCERMDNQGANKGRGSREAK------------STETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENNL---GEKGEQILSPFFWLREE-DVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSK----EEVHGNRDHLNLFDSEMFEWTQGACSPELLSSPDKMQVADTYE 1078
            C+ KSMKS S CPVCK+P  RREVRPAPHMDNLVSIYK+ME ASG NIF TQ+AP+   +D  K+ + D N   +M+  G + GR   +              S E+S     KPSFP  KRVQVPQ  LSET M   K G  L E+ +++       + E+      EK   +LSPFFWLREE D ER SQ +D D+ +  + P  PSFSD+KDSDDE  S     +EV  N+  +NLFDSEMFEWTQ  C+PEL SSP KMQV DTYE
Sbjct:  477 CVFKSMKSASACPVCKIPFTRREVRPAPHMDNLVSIYKNMEAASGVNIFETQNAPVTNLSDGEKQCEVDAN-SGKMEAGGTHTGRPREKKTRKKKESKKTVQASMESSGSDFAKPSFPAKKRVQVPQNLLSETPMKSLKIGVSLSEINKEKEGTEKVPVMESERPLQREKDNPVLSPFFWLREEKDGERLSQQTDDDEIIDGSTPNPPSFSDLKDSDDEIPSNVAPMDEVQ-NKGSVNLFDSEMFEWTQRPCTPELFSSPSKMQVMDTYE 744          

HSP 3 Score: 56.9954 bits (136), Expect = 2.004e-68
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 3
Query:  102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209
            MGD   LE+M REL CPIC SLL+SAVSLTCNH+FC
Sbjct:  442 MGD---LERMARELICPICWSLLDSAVSLTCNHLFC 474          
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: K7MAG9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 537.724 bits (1384), Expect = 3.599e-164
Identity = 257/419 (61.34%), Postives = 314/419 (74.94%), Query Frame = 2
Query: 1955 SESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKR---RNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202
            +++S  K  PL +  AL KCE+   K QC FCLS EE+E SG MVHY +G  V  DY GGSKV H H+NCTEWAPNVYF+ D AINLEAE+SRSR+IKCS CGLKGAALGCYEKSCR++FHVPCA   SQCRWD  NFV+LCPLHASS LP E S SQ   K+      +   L H      N   +  + +       K+VLCCS L+V+E+E++SEFE+++   VLK WDS++TH+IASTDENGAC+RTLK+L+GILEGKWILNI+W+KAC+K M  VDE +YEI +D+HGIRDGPRLGRLR+ NKQPKLF G KFY+MGDF PSYKG LQD+L+AAGG ILHRKP+SGD  +    +  +   IIYS+ELP KC P KK  I S+R+ +AE LASSTG+K  SN+W+L+SI+ACKL
Sbjct: 1014 NDTSKEKHCPLMDQTALRKCESHVTKYQCIFCLSSEESETSGPMVHYLDGRPVTADYEGGSKVTHCHRNCTEWAPNVYFDGDNAINLEAEISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCANWTSQCRWDTQNFVMLCPLHASSMLPCEGSGSQKRSKKCAASEGKNHGLKHDT---TNQSRAAHRSYK------KIVLCCSALSVQEREVVSEFERVSKAAVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGPVDEERYEINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYVMGDFIPSYKGYLQDLLVAAGGIILHRKPVSGDQESTSPDTHPYQTLIIYSLELPDKCKPLKKDTICSQRRHDAEVLASSTGSKVASNTWILNSIAACKL 1423          

HSP 2 Score: 228.024 bits (580), Expect = 6.590e-67
Identity = 138/272 (50.74%), Postives = 167/272 (61.40%), Query Frame = 2
Query:  329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTSADSGKRVKNDLNCCERMDNQGANKGRGSREAK------------STETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENNL---GEKGEQILSPFFWLREE-DVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSK----EEVHGNRDHLNLFDSEMFEWTQGACSPELLSSPDKM--QVADTYE 1078
            C+ KSMKS S CPVCK+P  RREVRPAPHMDNLVSIYK+ME ASG NIF TQ+AP+   +D  K+ + D N   +M+  G + GR   +              S E+S     KPSFP  KRVQVPQ  LSET M   K G  L E+ +++       + E+      EK   +LSPFFWLREE D ER SQ +D D+ +  + P  PSFSD+KDSDDE  S     +EV  N+  +NLFDSEMFEWTQ  C+PEL SSP KM  QV DTYE
Sbjct:  477 CVFKSMKSASACPVCKIPFTRREVRPAPHMDNLVSIYKNMEAASGVNIFETQNAPVTNLSDGEKQCEVDAN-SGKMEAGGTHTGRPREKKTRKKKESKKTVQASMESSGSDFAKPSFPAKKRVQVPQNLLSETPMKSLKIGVSLSEINKEKEGTEKVPVMESERPLQREKDNPVLSPFFWLREEKDGERLSQQTDDDEIIDGSTPNPPSFSDLKDSDDEIPSNVAPMDEVQ-NKGSVNLFDSEMFEWTQRPCTPELFSSPSKMQLQVMDTYE 746          

HSP 3 Score: 56.9954 bits (136), Expect = 6.590e-67
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 3
Query:  102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209
            MGD   LE+M REL CPIC SLL+SAVSLTCNH+FC
Sbjct:  442 MGD---LERMARELICPICWSLLDSAVSLTCNHLFC 474          
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: A0A059CCE7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00242 PE=4 SV=1)

HSP 1 Score: 511.531 bits (1316), Expect = 6.405e-164
Identity = 250/417 (59.95%), Postives = 315/417 (75.54%), Query Frame = 2
Query: 1955 SESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIR-KRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202
            SE  I +KL  ++ + L KC TI   +QCAFC S E +EASGEMVHY  G  VP DYNGGS++IHSHKNCTEWAPNVYF + KAINLEAE+ RSR+IKC CCG+KGAALGCYEKSCRK+FHV CA  ++QCRWD  NFV+LCPLH SS+LP E    Q ++   +  R QL+  H+E     + +   K   C S +K+VLCCS LT  E+E +S+F + +  TV+++W+  +TH+IASTDENGACKRT K+LMGILEGKWIL+++W+KAC++AM+ ++E +YEI  D+HG+R+GP+LGR R+ N QPKLFDG KFY MGDF+PSYKG LQD+++AAGGT+LHRKPI  D  A L  S A   FIIYS+E+P KC  S+  MI+ RR  +AEALA STGAK  SNSW+L SI+ACKL
Sbjct:  160 SELPIAEKLQDSDEMVLRKCGTIPRDVQCAFCQSSECSEASGEMVHYSNGEPVPADYNGGSRIIHSHKNCTEWAPNVYFVDGKAINLEAEVLRSRRIKCCCCGIKGAALGCYEKSCRKSFHVTCAMKIAQCRWDTVNFVLLCPLHFSSRLPIEIPRPQEMKSSSKEERSQLV--HDENDKEHQHASSSKRIYCGSHDKIVLCCSALTKAEREAVSQFGRASRATVVQKWNPTVTHVIASTDENGACKRTFKVLMGILEGKWILSVEWIKACMEAMEHINEERYEINADIHGMRNGPQLGRQRVINMQPKLFDGLKFYFMGDFDPSYKGYLQDLVVAAGGTVLHRKPIPCDELAPLPPSIA-STFIIYSLEMPDKCGLSRD-MIIKRRLSSAEALARSTGAKVASNSWLLDSIAACKL 572          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 22
Match NameE-valueIdentityDescription
KMT2B_HUMAN5.521e-730.25Histone-lysine N-methyltransferase 2B OS=Homo sapi... [more]
PHF11_BOVIN9.777e-733.63PHD finger protein 11 OS=Bos taurus GN=PHF11 PE=2 ... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V7BPN4_PHAVU2.600e-16661.30Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
V7BSD2_PHAVU2.648e-16661.30Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
K7MAH0_SOYBN3.426e-16461.34Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7MAG9_SOYBN3.599e-16461.34Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A059CCE7_EUCGR6.405e-16459.95Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 748..830
e-value: 1.6E-10
score: 50.9
coord: 863..970
e-value: 1.8E-7
score: 40.8
IPR001357BRCT domainGENE3D3.40.50.10190coord: 753..855
e-value: 6.5E-27
score: 93.2
IPR001357BRCT domainPFAMPF00533BRCTcoord: 754..827
e-value: 2.7E-8
score: 34.0
IPR001357BRCT domainGENE3D3.40.50.10190coord: 862..971
e-value: 3.4E-25
score: 88.2
IPR001357BRCT domainPFAMPF16589BRCT_2coord: 863..972
e-value: 1.6E-6
score: 28.3
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 861..976
score: 9.862
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 759..840
score: 13.089
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 754..853
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 863..904
coord: 936..972
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 421..437
e-value: 1.6E-6
score: 27.0
coord: 13..52
e-value: 1.6E-6
score: 27.0
NoneNo IPR availablePFAMPF13771zf-HC5HC2Hcoord: 623..701
e-value: 2.2E-10
score: 40.5
NoneNo IPR availablePANTHERPTHR13763:SF1PROTEIN BREAST CANCER SUSCEPTIBILITY 1 HOMOLOGcoord: 291..972
NoneNo IPR availablePANTHERPTHR13763:SF1PROTEIN BREAST CANCER SUSCEPTIBILITY 1 HOMOLOGcoord: 15..272
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..976
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..21
score: 0.452
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 15..272
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 291..972

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0098060 ID=g.barbadense_cottongen_reftransV1_0098060; Name=g.barbadense_cottongen_reftransV1_0098060; organism=Gossypium barbadense; type=contig; length=3566bp
CTATAACAATCTTCATCCATTCCTATTTCTAATTTCTTCCGTCGCTTATT
CTCTCTCTCTCTTTTCTCTCAAGAAGAAGAAAGGACAATTCATTCCCAAA
AATGGGGGATCCAAGTCACCTCGAGAAAATGGGCAGGGAGCTGAAATGCC
CCATTTGCTTGAGTCTTTTGAACTCTGCCGTTTCGCTCACTTGCAACCAT
GTCTTCTGCAAGTATGTTATATAGTCCTTTAATTCCTTCCACAGTTTCTT
TTTATTTATTTTTGGATCTAATTTTCATCCACTACATTGCAATCCCTGAT
ACCCAAAACTCTGTCACTTTTCAGTGTCTGTATTTTGAAATCAATGAAAT
CGGGTTCCGATTGTCCCGTCTGTAAAGTACCCTGCCGGCGTCGAGAGGTT
CGTCCAGCCCCTCACATGGATAACTTGGTTAGCATCTACAAAAGCATGGA
AGTTGCTTCAGGTTTCAATATATTTGTCACTCAGGACGCGCCTCTGGACA
CTTCAGCAGATTCTGGAAAGCGAGTTAAAAATGATCTCAATTGTTGTGAA
AGAATGGATAATCAGGGAGCAAACAAAGGAAGAGGATCAAGGGAGGCTAA
ATCAACGGAAACTTCTGATCCCATTTCTGTGAAGCCTTCTTTTCCAACCA
ACAAAAGGGTTCAGGTGCCACAATATCCCCTTTCAGAAACATCCATGCTG
CCTGAAAAGAATGGAGGTGGATTGATTGAAGTCACCGAGGATGAATCTAA
AATGAGTTCAGATATTCTGAAGGAGAACAATCTAGGAGAAAAGGGGGAGC
AAATACTTTCGCCCTTTTTCTGGTTGAGGGAGGAGGATGTAGAAAGGCCA
AGTCAGCTTAGTGATGGGGATCAATGTTTGTACATAACACCACCTGGACT
TCCTTCTTTCAGTGATATGAAGGATTCTGATGATGAAGGTTTTTCTAAGG
AGGAGGTGCATGGAAACCGTGATCATCTGAATCTTTTTGATAGTGAAATG
TTTGAATGGACACAGGGAGCTTGTTCCCCAGAACTTCTTTCAAGTCCTGA
TAAAATGCAGGTTGCAGACACCTATGAACCTGCATCACAGGGTGCAAGTA
CAGCTGAGCCCTGTAATAATGGCACATGCAAGATAACAGGACATGATGCT
TCAGAGGAGATGCTGCCTAATATAGAATCTCTCAGAATCCAGTGTGTTAG
TAGTAATAAGATCAGGAGTTGTAAATCCAAGGAGTTGGGTAAGAAACAGA
GAAAGACTGCCCAAAAGAATATAGCTGACAGAACTAGCAGTCATATTTCT
GGAGATCATGTCAATCTGGGAAAAGGGTCTGAAGATTTTAATAAAAAACA
AAAAGATGACTGTAGTAGTTCTTCATATTTGGCTAAGACTAGGAAAAATT
GTAAGGTGGCTGGTTTGGATCACCATGTAACTGAACCAATGGCATCACAT
TTTTCTGCCAAAGCTCCTAAACAGGAAGACACACCATTGGCTGCCATAGT
GGGTATGGGGAAATGTGGTGATGAAAATGAGAATTTGAGGATGGTAAAAC
GTTGCAGGAAGATCACTGCCCAGTGCCAAAATAAATCTTGTTCAAAGTTG
AAGAAACAAAAACTAAGTTTGGTTAAAGTTGATACCCCTAAAGAAGTTTT
AACCGTTTGCGGGCAGGCAAATGAATATATGATTCAACAGAAGTCTTCTC
TTCCCGTTCCCTTAGCTCATGAAAATGCTGCTGAGCAGTTCAGAAAAGGA
TTGAGTAAACATACTAGAGAAGTAAAGTTGGCTCCGACTTTGAAAAGTGA
AAAAAACTCGGGTTGTAAGAAAAAGATTAAAGTTTATTTTAGTGATGACA
TGAAAAGCTGGTTGCCTGAAGACCAACAGCAGCAGGGAGGAAATGCTAAC
ATTTCTCTAGAGAGAGTAAGTGAAAAGGTTCATGGGAGGACTACTGTTGG
AAATTCAGAGAGCTCAATAGTAAAGAAGTTGCCTCTAGCTAATGGAGTGG
CACTGCATAAATGTGAGACCATTACAATTAAAATACAATGTGCTTTCTGT
CTTTCTATGGAAGAAACTGAGGCTTCTGGAGAGATGGTTCATTACTATGA
AGGCAGTTCTGTTCCTCTAGATTACAATGGTGGCTCCAAGGTCATACATT
CACACAAGAACTGTACTGAATGGGCCCCTAATGTTTATTTTGAAAATGAC
AAGGCAATCAACCTTGAGGCTGAACTCTCCAGAAGTCGAAAAATAAAATG
CTCCTGTTGTGGACTCAAAGGTGCAGCGTTGGGCTGTTATGAAAAAAGTT
GTCGGAAGACTTTCCATGTTCCCTGTGCAAAACTAGTCTCACAATGCCGG
TGGGATGTTGATAACTTTGTAATTTTATGCCCTCTCCATGCCTCCTCTAA
GTTGCCTAATGAAAAGTCAGAGTCCCAAGGAATCCGAAAAAGACGCAATT
TAAGAGGACAGTTGCTGATACACCACAATGAAATTCCTATAAATGATGAA
GTTAGTGTGCAGAAGAAATGGAATACTTGTGAATCAGGCAACAAATTGGT
TCTCTGTTGCTCAGGTCTCACAGTTGAGGAAAAGGAAATCATGTCTGAAT
TTGAGAAATTAGCTGGTGTTACAGTGTTGAAGAGATGGGATTCAAATATT
ACCCATATCATTGCATCCACCGATGAAAATGGAGCATGCAAAAGAACCCT
TAAAATTTTAATGGGTATCTTGGAGGGGAAGTGGATACTGAATATAAAGT
GGGTCAAAGCTTGCATCAAAGCCATGAAACTTGTTGATGAGTTGAAATAT
GAAATAACTATTGATGTTCATGGAATCAGGGATGGTCCCCGACTTGGAAG
GCTGAGACTCCAGAATAAGCAACCAAAGCTTTTTGATGGGTGTAAGTTCT
ATATAATGGGGGATTTTGAACCTTCTTATAAGGGAGATCTACAGGATGTT
TTAATCGCAGCAGGAGGTACCATTCTGCATAGAAAACCCATATCAGGTGA
CCCGGGAGCCCGATTATTGGGTTCCCCTGCATTTCCAATCTTCATAATTT
ATAGCGTCGAGTTGCCTGTCAAGTGTGATCCCAGCAAGAAGCACATGATT
TTAAGCCGCAGGCAATTAAATGCGGAAGCTCTGGCAAGTTCAACTGGAGC
CAAAGCAGTAAGCAATTCTTGGGTTTTGAGCTCCATATCTGCATGCAAAT
TGAGTCTTGGCGAATAATGATACAGATTATAGAACGTTCCTTTCCTTGTA
TGTCTAAGCAGTTCTATAATTTGTATCTTATGTTTAAATATGGCTTATTC
CAGCAATAGGTTTTATATTTTATCGATAGCTTTGACTGCAAGTATGATCA
CTTGTACCTGTTGGGCTATTTTACGGACAGTTTACTCTTATATTGTGTAA
GGCGCAGCAGGCAACTAAAGAAGCGGAATTGTTTTCTGCGCATCCAGTAC
GTGAACTTGATTTTTTTTTTTTTCACTTTTGTGTCTAAGTTTTTTTTTTA
ATTTGGTATTTAAATGACTTTTTAATTTGGGTTAATTTTTTTTTTCAATT
TGATTTTAAATTTGAC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR013083Znf_RING/FYVE/PHD
IPR031099BRCA1-associated
Vocabulary: Biological Process
TermDefinition
GO:0006974DNA damage response
GO:0006281DNA repair