g.barbadense_cottongen_reftransV1_0098060, g.barbadense_cottongen_reftransV1_0098060 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: BRCA1_HUMAN (Breast cancer type 1 susceptibility protein OS=Homo sapiens GN=BRCA1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.841e-12 Identity = 48/171 (28.07%), Postives = 87/171 (50.88%), Query Frame = 2 Query: 2543 KLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRD--GPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFII 3049 ++ + SGLT EE ++ +F + +T+ TH++ TD C+RTLK +GI GKW+++ WV IK K+++E +E+ DV R+ GP+ R +++ K+F G + G F L+ ++ G +++ K +S + LG+ PI ++ Sbjct: 1649 RMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRAR---ESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVV--KELS----SFTLGTGVHPIVVV 1810
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: BRCA1_GORGO (Breast cancer type 1 susceptibility protein homolog OS=Gorilla gorilla gorilla GN=BRCA1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.745e-12 Identity = 48/171 (28.07%), Postives = 86/171 (50.29%), Query Frame = 2 Query: 2543 KLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRD--GPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFII 3049 ++ + SGLT EE ++ +F + +T+ TH++ TD C+RTLK +GI GKW+++ WV IK K+++E +E+ DV R+ GP+ R +++ K+F G G F L+ ++ G +++ K +S + LG+ PI ++ Sbjct: 1649 RMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKEGKMLNEHDFEVRGDVVNGRNHQGPKRAR---ESQDRKIFRGLDICCYGPFTNMPTDQLEWMVQLCGASVV--KELS----SFTLGTGVHPIVVV 1810
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: BRCA1_MACMU (Breast cancer type 1 susceptibility protein homolog OS=Macaca mulatta GN=BRCA1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.714e-11 Identity = 48/171 (28.07%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 2543 KLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRD--GPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFII 3049 ++ L SGLT EE ++ +F + + + TH++ TD C+RTLK +GI GKW+++ WV IK K+++E +E+ DV R+ GP+ R ++ K+F G + G F L+ ++ G +++ K +S + LG+ PI ++ Sbjct: 1649 RMSLVVSGLTPEEFMLVYKFARRYHIALTNLISEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRAR---ESPDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVV--KELS----SFTLGTGFHPIVVV 1810
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: BRCA1_CANFA (Breast cancer type 1 susceptibility protein homolog OS=Canis familiaris GN=BRCA1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.268e-11 Identity = 40/129 (31.01%), Postives = 68/129 (52.71%), Query Frame = 2 Query: 2543 KLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRD--GPRLGR--LRLQNKQPKLFDGCKFYIMGDF 2917 ++ + SGLT +E ++ +F + +++ TH+I TD C+RTLK +GI GKW+++ WV IK K++DE +E+ DV R+ GP+ R +++ K+F G + G F Sbjct: 1652 RISMVASGLTPKEFMLVHKFARKHHISLTNLISEETTHVIMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKILDEHDFEVRGDVVNGRNHQGPKRARESQDRESQDRKIFRGLEICCYGPF 1780
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: TRX_DROME (Histone-lysine N-methyltransferase trithorax OS=Drosophila melanogaster GN=trx PE=1 SV=4) HSP 1 Score: 68.5514 bits (166), Expect = 3.873e-10 Identity = 56/177 (31.64%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 1868 EDQQQQGGNANISLERVSEKVHGRTTVGNSES-SIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAI-NLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHA 2392 ED Q GG VS V+ + +ES S V +PL C I +++ CL + SGE + G L Y G +H+ NC W+ V+ E D ++ N+ + ++R R IKC+ CG +GA +GC +SC + +H PCA+ + C + D + CP HA Sbjct: 1685 EDLQDTGG--------VSASVYNEHSTSQAESRSGVLDIPLEEVDDFGSC-GIKMRLDTRMCLFCRK---SGEGL---SGEEARLLYCGHDCWVHT--NCAMWSAEVFEEIDGSLQNVHSAVARGRMIKCTVCGNRGATVGCNVRSCGEHYHYPCARSI-DCAFLTDK-SMYCPAHA 1842
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: TRX_DROVI (Histone-lysine N-methyltransferase trithorax OS=Drosophila virilis GN=trx PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.672e-10 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 2 Query: 2153 HKNCTEWAPNVYFENDKAI-NLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKL 2404 H NC W+ V+ E D ++ N+ + ++R R IKC+ CG +GA +GC KSC + +H PCA+ + C + D + CP HA + L Sbjct: 1738 HINCAMWSAEVFEEIDGSLQNVHSAVARGRMIKCTVCGNRGATVGCNVKSCGEHYHYPCARTID-CAFLTDK-SMYCPAHARNAL 1820
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: TCF20_MOUSE (Transcription factor 20 OS=Mus musculus GN=Tcf20 PE=1 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 2.774e-9 Identity = 34/93 (36.56%), Postives = 47/93 (50.54%), Query Frame = 2 Query: 2111 VPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLH 2389 +PLD N H+ C WA +Y + L+ L +R++KCS C GA LGCY K C +H PCA + + C +NF + CP H Sbjct: 1872 LPLDSN----EFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCA-IDADCLLHEENFSVRCPKH 1959
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: TCF20_HUMAN (Transcription factor 20 OS=Homo sapiens GN=TCF20 PE=1 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 2.887e-9 Identity = 40/121 (33.06%), Postives = 52/121 (42.98%), Query Frame = 2 Query: 2066 TEASGEMVHYYEGSSVPLDYNGG-------------SKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLH 2389 TE S E SVP GG S H+ C WA +Y + L+ L +R++KCS C GA LGCY K C +H PCA + + C +NF + CP H Sbjct: 1813 TEGSSEKTVLDSKPSVPTTSEGGPELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCA-IDADCLLHEENFSVRCPKH 1932
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: PHF11_HUMAN (PHD finger protein 11 OS=Homo sapiens GN=PHF11 PE=1 SV=3) HSP 1 Score: 57.3806 bits (137), Expect = 3.388e-7 Identity = 37/135 (27.41%), Postives = 67/135 (49.63%), Query Frame = 2 Query: 2123 YNGGSKVIHSHKNCTEWAPNVY-------FENDKAINLEA---ELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAK---LVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQLLIHHNEIP 2488 Y S+ I +H+NC ++ + D++ ++E+ E+ R RK+KC C +GA +GC K+C K +H CAK V Q + +LC HA + + ++ G++++R + L +H + P Sbjct: 58 YFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQPP 192
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Match: KMT2B_MOUSE (Histone-lysine N-methyltransferase 2B OS=Mus musculus GN=Kmt2b PE=1 SV=3) HSP 1 Score: 58.151 bits (139), Expect = 5.520e-7 Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 2 Query: 2036 QCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAI-NLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLH 2389 QCA CL + ++ Y G + +H NC W+ V+ END ++ N+ A ++R R+++C C GA +GC SC FH CA+ S C + D+ + C H Sbjct: 1586 QCALCLKYGDADSKEAGRLLYIGQNE-----------WTHVNCAIWSAEVFEENDGSLKNVHAAVARGRQMRCELCLKPGATVGCCLSSCLSNFHFMCAR-ASYCIFQ-DDKKVFCQKH 1691
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: B9SYJ0_RICCO (Brca1 associated ring domain, putative OS=Ricinus communis GN=RCOM_1288560 PE=4 SV=1) HSP 1 Score: 763.837 bits (1971), Expect = 0.000e+0 Identity = 482/996 (48.39%), Postives = 619/996 (62.15%), Query Frame = 2 Query: 329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTSADSGKRVKNDLNC--------CE-RMDNQGANKGRGSREA--KSTETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDES-----KMSSDILKENNL-GEKGEQILSPFFWLR-EEDVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSK----EEVHGNRDHLNLFDSEMFEWTQGACSPELLSSP--DKMQVAD--TYEPASQGA-STAEPCNNGTCKITGHDASEEMLPNIESLRIQCVSSNKIRSCKSKELGKKQRKTAQKNIADRTSSHISGDHVNLGKGSEDFNKKQKDDCSSSSYLAKTRKNCKVAGLDHHVTEPMASHFSAK--APKQEDTPLAAIVGMGKCGDENENLRMVKRCRKITAXXXXXXXXXXXXXXXXXXXXDTPKEVLTVCGQANEYMIQQKSSLPVPLAHENAAEQFR-KGLSKHTREVKL-APTLKSEKNSGC--KKKIKVYFSDDMKSWLPEDQQQQGGNANI----SLERVSEKVHGRTTVGNSESSIVK------------KLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQ-GIRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSN 3166 CI+KSMKSGS+CPVCKVP +RREVR APHMDNLV+IYKSME ASGF IFVTQD P S K ++ + NC C+ ++NQ K +GSR+ + E SDPI+ KPSFPT KRVQVPQ S+T EK +E+ DE+ K SS EN + EKGE + SPFFWLR EED+E+ SQ + G Q L ITPP +P+FSD+KDSDDE SK EEV G + + FDSEMFEWTQ ACSPEL S+P KM VAD + P++ G ST N G A + ML ++ ++++C + L +K ++T QK H N G S DFNK +K + S + T L H P++ + + K+ D L + VG +C D++ + K C KI+ C+ + KK+KL + D I++ ++ P E + + K +S+ R+ +L + L SE N KK +KV+F + + D Q+ N + S+E V++ V R T ++ I+ KL ANG AL C+ ++ K +C+FCLS EE+EASGEMVHYY G V Y GG KVIHSH+NC EWAPNVYFE+D AINLEAEL+RSR+IKC CCGLKGAALGCYEKSCRK+FHV CAK++ QCRWD DNFV LCPLHASSKLPNE S +Q IRK+ + Q N++ + D VS WN+ + + L+LCCSGLTVEE+EI+SEF++L+GVTV K WD ++TH+IASTD NGACKRTLKILMGILEGKWILNI+WVKAC+ AMK V E +E+ +D+HGIRDGPRLGR+R+ KQPK+F+G +FY MGDF SYKG +QD++ A GGTILHRKP+ PGA SP+ FIIYS ELP KCD KK MIL+RR+ +AEALAS T AKA+++ Sbjct: 39 CIVKSMKSGSNCPVCKVPYQRREVRAAPHMDNLVNIYKSMEAASGFQIFVTQDPP------STKLLEGNTNCRREDIQRICQDTVENQRMGKRKGSRKKFKSNLEFSDPIAAKPSFPTKKRVQVPQSLPSKTPTRNEK-----LEIKSDENIRDGFKNSSLAQNENPVPSEKGEPVFSPFFWLRDEEDIEKLSQHTVGSQFLDITPPHVPAFSDIKDSDDEYPSKLSPEEEVCGKSNDADFFDSEMFEWTQRACSPELYSTPFKHKMTVADEDSSIPSTLGPKSTNTQIVNDKSNRRGRTARKAMLKKCAKKDVE----QELKACFN--LKRKTKETMQKEA-----------HENKG-DSLDFNKNRKSRKKTVSGTSSTE-------LKHESVLPVSLRGESLNLSDKRLDADLPSSVGENQC-DKDFKRNITKICGKISTLCRRAHSLRSKKRKLESIIND----------------IEENDAVQNPEDEEESPSKIDGKNVSEVKRKCQLHSSALSSENNRKLRQKKNMKVFFHGISEDGILTDHQEGQSNTSTKETQSIEMVTD-VFTRQTQFIEKAQIIPGSRIQNNPVMLGKLDRANGAALQSCQALSRKTRCSFCLSSEESEASGEMVHYYNGRPVAASYGGGYKVIHSHRNCAEWAPNVYFEDDTAINLEAELTRSRRIKCCCCGLKGAALGCYEKSCRKSFHVTCAKMIPQCRWDTDNFVTLCPLHASSKLPNEDSLTQERIRKKCIPKRQQSNQCNQVDLKD-VSTCPSWNSSLTPDNLILCCSGLTVEEREIVSEFQRLSGVTVFKNWDLSVTHVIASTDVNGACKRTLKILMGILEGKWILNIEWVKACMNAMKPVQEDPFEVLVDIHGIRDGPRLGRIRILKKQPKIFEGLQFYFMGDFVASYKGYIQDLIFAGGGTILHRKPL---PGAEGASSPS--TFIIYSTELPDKCDIKKKDMILNRRKADAEALASETEAKALAD 974 HSP 2 Score: 73.9442 bits (180), Expect = 5.943e-10 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209 MGDP HLEKMG ELKCPICLSLLNSAVSLTCNH+FC Sbjct: 1 MGDPIHLEKMGTELKCPICLSLLNSAVSLTCNHIFC 36
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: M5WNS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000720mg PE=4 SV=1) HSP 1 Score: 743.421 bits (1918), Expect = 0.000e+0 Identity = 480/1005 (47.76%), Postives = 617/1005 (61.39%), Query Frame = 2 Query: 329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTSADSGKRVKND--------LNCCERMDNQGANKGRGSREAKST-ETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENN-LGEKGEQILSPFFWLREEDVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSK----EEVHGNRDHL-NLFDSEMFEWTQGACSPELLSSPDKMQVADTYE-PASQGASTAEPCNNGTCKITGHDA-------SEEMLPNIESL-RIQCVSSNKIRSCKSKELGKKQRKTAQKNIADR---TSSHISGDHVNLG---KGSEDFNKKQ--KDDCSSSSYLAKTRKNCKVAGLDHHVTEPMASHFSAKAPKQED------TPLAAIVGMGKCGDENENLRMVKRCRKITAXXXXXXXXXXXXXXXXXXXXDTPKEVLTVCGQANEYMIQQKSSLPVPLAHENAAEQFRKGLSKHTREVKLA--------PTLKSEKNSGCKKKIKVYFSDDMKSWLPEDQQQQGGNANISLERVSEKVHGRTTVGNSESSIVKKLP-LANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202 CI+KSMKSGS+CPVCK+P RRRE+RPAPHMDNLVSIYKSMEVASG NIFVTQ+AP S+D + ++D +C +R + Q + +G+GSR+ KS + S +SVKPSFPT KRVQVPQ PLSET PEK G L++ + SK SS LK L E GE +LSPFFWLR++D E SQ +DGDQ L +PP +P+FSD+KDS+DE ++ EVHG ++ +LFDSEMFEWTQ CSPEL SP KMQV D+ + Q E N K+ H A S + N+ L I + S EL K+ R+T +NI+ R TS G V++ KGS+ F ++ K++ SS + ++K K + + T S +A Q + T +G + G + + K C ++ A+ Q + +KQK+ + +EV V QAN+ S + + A +F K R KL T+ S+ NS DD + E GN N + + +EK+ G V ++ S V+KLP L N + L +CE I KIQCAFCLS EE+EASGE+VHYY G V +D+NGG KVIH+H+ CTEW SR+IKCSCC +KGAALGCYE+SCRK+FHV CAKL+ +CRWD+DNFV+LCPLHASSKLPNE SESQ R++ N R Q H + + + ++ C S KLVLCCS LT E+E +S FE+L+G TVLK WDS++TH+IAS DENGAC+RTLK+LMGILEG+WIL+++W+ ACI+AMKLV+E YEI +D++GIRDGPRLGRLRLQNKQPKLFDG KFY MGDF PSYKG LQD++IAAGGTILHRKP+ A SP FIIYS+E P + PSK IL RRQ +A+ALASS GA A SNSW+L+SI+ACKL Sbjct: 39 CIVKSMKSGSNCPVCKIPYRRREIRPAPHMDNLVSIYKSMEVASGINIFVTQNAPSTKSSDGKLQAQDDGHDEQDIPKHCQDRDEKQKSLRGKGSRKTKSNLKNSGSLSVKPSFPTKKRVQVPQCPLSETPTRPEKTVGKLMD---ERSKHSSTTLKGRPVLNEVGEPMLSPFFWLRDKDEENLSQHTDGDQ-LTDSPPNVPTFSDIKDSEDEYSARLTPPGEVHGKSSNVADLFDSEMFEWTQRECSPELFQSPSKMQVPDSDDIDRVQEKELKEISQNK--KLDAHSAKNARSRNSRQSSGNMYFLPDIPPAGAKDNSQVVSNELNKQGRQT--RNISKRKCATSHTDPGADVSVNVNSKGSKVFYEEPVCKNNSSSLAKISKRSKKEHPSVVAMKPTSENVHVLSTEAETQNNGDDKGITESPTSLGKSEGGSAPPSKKAGKICNEVNAKSQMHCPVRSRKQKMVSMPNKMLEEVSEVQKQANKDTTTDLSLINLSTVDNKKASEFGNKSRKLQRGAKLCDRELKNKKATVSSDGNS----------KDDTFVRVGEGH----GNVNENGNQPTEKIEGNCDVP-TDRSPVQKLPSLTNNLVLQRCEAIPSKIQCAFCLSSEESEASGEIVHYYNGKPVAVDHNGGLKVIHAHRICTEW--------------------SRRIKCSCCEIKGAALGCYERSCRKSFHVTCAKLMPECRWDIDNFVMLCPLHASSKLPNESSESQARRRKSNPRKQSNAEHYKAAVKQDNTMPPDRKFCGSSKKLVLCCSSLTNAERESVSGFERLSGFTVLKNWDSSVTHVIASVDENGACRRTLKVLMGILEGRWILSMEWINACIEAMKLVNEEPYEINVDIYGIRDGPRLGRLRLQNKQPKLFDGFKFYFMGDFVPSYKGYLQDLVIAAGGTILHRKPVPEGQKAFSASSPKCQTFIIYSLEQPEQGHPSKG-TILDRRQSDAKALASSAGAMAASNSWILNSIAACKL 999 HSP 2 Score: 71.2478 bits (173), Expect = 4.520e-9 Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 3 Query: 102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209 M P+HLEKMGRELKCPICLSLLNSAVSL CNHVFC Sbjct: 1 METPAHLEKMGRELKCPICLSLLNSAVSLNCNHVFC 36
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: A0A072V4U2_MEDTR (Breast cancer susceptibility-like protein, putative OS=Medicago truncatula GN=MTR_2g018880 PE=4 SV=1) HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0 Identity = 432/1010 (42.77%), Postives = 582/1010 (57.62%), Query Frame = 2 Query: 329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTSADSGKRVKNDLNCCER----------MDNQGANKGRGSREAKSTETSD---------PIS--VKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENNLG-EKGEQILSPFFWLREE-DVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSKE----EVHGNRDHLNLFDSEMFEWTQGACSPELLSSPDKMQVADTYE----------PASQGASTAEPCNNGTCKITGHDASEEMLPNIESLRIQCVSSNKIRSCKSKELGKKQRKTAQKNIADRTSS-HISGDHVNLGKG--SEDFNKKQKDDCSSSSYLAKTRKNCKVAGL--DHHVTEPMASHFSAKAPKQEDTPLAAIVGMGKCGD----------ENENLRMVKRCRKITAXXXXXXXXXXXXXXXXXXXXDTPKEVLTVCGQANEYMIQQKSSLPVPLAHENAAEQFRKGLSKHTREVKLAPTLKSEKNSGCKKKIKVYFSDDMKSWLPEDQQQQGGNANISLERVSEKVHGRTTVGNSESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202 CI KSMKS S CPVCK+P RREVRPAPH+DNLV+IYK+ME ASG N+F TQ+ S D + D E+ + + + R ++ K++ S P S KPSFP KRVQVPQ LSET + K GG + +V ++ ++ +S + +G EK +Q+ PFFWLREE D ER S +D DQ + P PSFSD+KD+DDE K+ EV N+ ++LFDSE FEWTQ CSPEL SSP K QV DT E + ++ + CN G+ +E +LP + S + SS+ + K K+ RK +K+ D + D +N+ S+ ++ D +S L K+ K K T P+A S I+G+ GD E++ ++ KI + Q + K + + D P+++ +V Q E SSL + + RK S +R K P++ +E+ S K K+ F K+ ++ + G+ N G ++SS K L + L KC + + QCAFCLS EE+EASG MVHY++ V D+ GG KVIH H+NCTEWAPNVYFE+D AINLEAE+SRSR+IKC CGLKGAALGC+EKSCR++FHVPCAK +CRWD++NFV+LCPLHA S LP E S SQ K+ + + +D S + + S K+VLCCS L+V+EKE++SEFE+++ VTVLK WDS +TH+IASTDENGAC+RTLK+L+GILEGKWIL+I+W+KAC+K + VDE +YE+ +D+HGI+DGPRLGRLR+ NKQPKLFDG KFY MGDF PSYKG LQD++IAAGG +LHRKP+S D L IIYS+ELP K +P +K I S+R+ +AEALA T +K SN+W+L+SI+ CKL Sbjct: 36 CIFKSMKSASSCPVCKIPFTRREVRPAPHIDNLVTIYKNMEAASGINLFGTQNPTATKSPDDEMQGGGDAESGEKGIGGTHENHAEEEKTPTRKRSRKKLKTSTISSEKLKTSRKSPASNRAKPSFPAKKRVQVPQDILSETPLRNLKTGGSITQVNKEGTQEASIKRNVSAIGSEKRDQVKEPFFWLREEQDGERLSAQTDEDQIIEGPTPIPPSFSDLKDADDESPLKQAPSDEVQ-NKPSVDLFDSEFFEWTQKPCSPELFSSPIKTQVEDTDEIDENIEEWVAALQEKQTSVDACNTNFENPNGNQLAEALLPGLSS---EIRSSDDLNG--KKNSTKRSRKAREKSRQDHIRELNCLSDEINMDADITSKVIEEQSLDYKHKASNLKKSNKRGKKVSFVTSTESTPPIACTVSN------------ILGVQNIGDRKTAKNSYTSESKQDNEMQFPEKIAGKRQVRRSGKQRLDVVD----DPPEDLTSVQNQCKELAGSASSSLRLQMDSNRNTVNTRKRKSSLSR--KSTPSV-TERKSTKKSKLSPEFISRTKNG---EEIKPTGSTN----------PGTDVRPLNDSSKEKHCSLTDQPVLRKCVSHAKEYQCAFCLSSEESEASGPMVHYFDEKPVTADFEGGPKVIHCHRNCTEWAPNVYFEDDNAINLEAEISRSRRIKCGFCGLKGAALGCFEKSCRRSFHVPCAKWTPECRWDMENFVMLCPLHAPSLLPCESSGSQHNSKKHTAKKVKICSRK----HDTTSQSQIAHG--SHKKIVLCCSALSVQEKEVVSEFERVSKVTVLKTWDSGVTHVIASTDENGACRRTLKVLLGILEGKWILSIEWIKACMKETRPVDEERYEVNVDIHGIKDGPRLGRLRVVNKQPKLFDGYKFYFMGDFIPSYKGYLQDLVIAAGGIVLHRKPVSADQNEILPTMNQHRTLIIYSLELPAKSNPLEKDAIFSQRRCDAEALARPTCSKVASNTWILNSIAGCKL 1001 HSP 2 Score: 64.6994 bits (156), Expect = 4.542e-7 Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 3 Query: 102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209 MGD LEKMGRELKCPICL LL+SAVSLTCNH+FC Sbjct: 1 MGD---LEKMGRELKCPICLGLLHSAVSLTCNHLFC 33
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: A5AT78_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016807 PE=4 SV=1) HSP 1 Score: 699.508 bits (1804), Expect = 0.000e+0 Identity = 443/988 (44.84%), Postives = 568/988 (57.49%), Query Frame = 2 Query: 416 MDNLVSIYKSMEVASGFNIFVTQDAP-LDTSADS--------GKRVKNDLNCC---------ERMDNQGANKGRGSREAKST--ETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKEN-NLGEKGEQILSPFFWLRE-EDVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSKEEVHGNRD-HLNL---FDSEMFEWTQGACSPELLSSPDKMQVADTYE----------PASQGASTAEPCNNGTCKITGHDASEEMLPNIESLRIQCVSSNKIRSCK-------SKELGKKQRKTAQKNIADRTSSHISGDHVNLGKGSEDFNKKQKDDCSSSSYL-AKTRKNCKVAGLDHHVTEPMASHFSAKAP-----KQED----TPLAAIVGMGKCGDENENLRMV-KRCRKITAXXXXXXXXXXXXXXXXXXXXDTPKEVLTVCGQANEYMIQQKSSLPVPLAHENAAEQFRKGLSKHTREVKLAPTLKSEKNSGCKKKIKVYFSDDMKSWLPEDQQQQGGNANISLERV----SEKVHGRTTVGNSESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQG-IRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202 MD+LVSIYKSME ASG N+FVTQ+AP S D+ ++ + D NC ER NQ KG+G + + T E S KPSFP KRVQVPQYPLSET P K GGL E+++ K +S +L E L + GE + SPFFWLRE EDVE SQ DGD L + P +PSFSD+K SDDE S+ G D N+ FDSE+FEWTQ ACSPEL SSP +MQV D+ E P SQ A+ E T +TG + E ++R+ +SS + ++ SK+ G+K K QK A R + + G H+N EDF Q D SS L KT K C+ A D++ T + S+ + Q+D T L A + DEN NL+ +RC + Q Q + K QKL + D ++ Q N M + +P+A + A + SKH R + K +K KK+KV D K L +D Q+ G+ +S + + + + V + S+ K L +G AL KCE+I KI CAFC S +++EASGEMVHY+ G + D+NGGS +IHSH+NCTEWAPNVYFE+ A+NL+AEL+RSR+I C CCG+KGAALGCYEKSCRK+FH PCAKL QCRWD DNFV+LCPLHASSKLPNE S RK+ + +GQ I ++ + ++S ++WN+ S KLVLCCS LTV EK+I+SEFE+L+GVTVLK+W I KAC+KA + V E +YEI ID+HGIRDGPRLGRLRL NKQPKLF+G KFY GDF PSYKG LQD++IAAGGT+LHRKPI G+ GS + FIIYS+ELP KC P K+ I + R+ AEALA STGAK SNSW L+SI+AC++ Sbjct: 1 MDSLVSIYKSMEAASGINVFVTQNAPSTKLSGDTCIPNMRMYKQQTEGDQNCGGQKADNASEERARNQRKLKGKGPKRSLKTNPEDSGLNPAKPSFPGKKRVQVPQYPLSETPKRPAKLDGGLSEMSKGGPKNNSVVLNEKPALNDNGELVFSPFFWLREDEDVENSSQQMDGDLXLSSSLPNVPSFSDIKGSDDEMPSELTPKGKVDTEFNVADPFDSEIFEWTQRACSPELCSSPMEMQVPDSDEFDEIQKGENKPDSQSATKEEEAPR-TENMTGMNCKEGT--GCAAMRLPAMSSPETKNANGQNGIGISKKRGRKSNKKGQKKRAKRGADEVLGIHINAQSVVEDFIPVQDCDKDGSSNLRKKTHKGCEKACFDNNATGAAPENVSSVSVGSKSLNQDDENIITALPASLVKKHVSDENLNLKKRGRRCANVNTQSQKGHTVRSKNQKLESAEDDMLEKGAITPNQINYDMFSHSPCVSLPMADDGKASNRGEKASKHGRIISKV-NQKRDKRLRPSKKLKVSTDDISKYGLIDDTQE--GHTKVSAKSTQPINNNQCNPEVRVLDYSSTAKKALSATSGGALRKCESIPNKISCAFCHSAQDSEASGEMVHYFNGRPIAADHNGGSNIIHSHRNCTEWAPNVYFEDGTAVNLKAELTRSRRITCCCCGIKGAALGCYEKSCRKSFHFPCAKLTPQCRWDTDNFVMLCPLHASSKLPNEISGPPAKTRKKCSTKGQSDIQRAQVAVKHDISTSQRWNSHGSPGKLVLCCSALTVAEKDIVSEFERLSGVTVLKKWGPGI-----------------------------------KACMKAKEPVAEEQYEIGIDIHGIRDGPRLGRLRLLNKQPKLFNGFKFYFFGDFMPSYKGYLQDLVIAAGGTVLHRKPILGNQETLSSGSSIYETFIIYSLELPEKCGPDMKNQIFTCRRSEAEALARSTGAKVASNSWFLNSIAACQV 947
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: B9GJF8_POPTR (BRCT domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s36840g PE=4 SV=1) HSP 1 Score: 618.616 bits (1594), Expect = 0.000e+0 Identity = 310/536 (57.84%), Postives = 380/536 (70.90%), Query Frame = 2 Query: 1640 KEVLTVCGQANEYMIQQKSSLPVPLAHENAAEQFRKGLSKHTREVKLAPTLKSEKNSGCKKKIKVYFSDDMKSWLPEDQQQQGGNANISLERVSEKVHGRTTVGNSESSIVKKL-------PLA--------NGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202 KEV ++ Q ++ LP PL + + + K EVK A + ++ CKK ++V ++ L D Q+ N + +E + G + + V+ LA NG A+ C+ + IQCAFCLS E +EASGEM+HY G V DYNGGS+VIHSHKNC EWAPNVYFE D AINLEAEL+RSR+IKC CCGLKGAALGCYEKSCRK+FHVPCAKL QCRWD +NFVILCPLHAS KLPNE +SQ RK +GQ +N++ ++++ K +C + +KLVLCCS LTV EKEI+SEFE L+GVTVLK WDS++TH+IASTDENG C+RTLK+LMGIL+GKWI+NI+WVKACIKAMKLV+E++YEIT DVHGIRDGPR GRLR+ NKQP +F+G KFY MGDF PSYKG +QD+L+A GGTILHRKPISG G LL S P FI+YS+E+P KCDPSKK+MIL+RRQ +AEALASSTGAKAVSN WVL+SI+ACKL Sbjct: 491 KEVHSIHNQMDKDEHAHDYFLPAPLVEDKKPSEIKGKRGKQGEEVKSALCPEHNQDLKCKKNMEVSLDGIIEDGLVSDHQEGADNVFAEEAQSTENITGNSARATESAEKVQASLNTRILDDLATLRDHCQENGAAILNCK-LNYNIQCAFCLSSEVSEASGEMIHYNNGIPVAADYNGGSRVIHSHKNCAEWAPNVYFEGDNAINLEAELARSRRIKCCCCGLKGAALGCYEKSCRKSFHVPCAKLTHQCRWDTENFVILCPLHASCKLPNESKQSQERRKNCISKGQTPRQYNQVTFKHDINMHKSRKSCLTHDKLVLCCSALTVGEKEIVSEFESLSGVTVLKNWDSSVTHVIASTDENGTCRRTLKVLMGILKGKWIVNIEWVKACIKAMKLVEEMRYEITADVHGIRDGPRNGRLRVLNKQPNIFEGFKFYFMGDFIPSYKGYIQDLLVAGGGTILHRKPISGAQGTLLLDSKP-PTFIMYSLEMPDKCDPSKKNMILNRRQSDAEALASSTGAKAVSNKWVLNSIAACKL 1024 HSP 2 Score: 270.781 bits (691), Expect = 5.197e-86 Identity = 151/269 (56.13%), Postives = 183/269 (68.03%), Query Frame = 2 Query: 329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTS-ADSGKRVKNDLNC--------CERMDNQGANKGRGSREAKSTETS----DPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENN-LGEKGEQILSPFFWLREEDVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEG----FSKEEVHGNRDHL-NLFDSEMFEWTQGACSPELLSSPDKMQVADTYE 1078 CI+KSMKSGSDCPVCKVP RRREVR APHMDNLVSIYKSME+ASGFNIFVTQ+ P T +D K+V +D +C C+ M ++ R K E++ PI+ KPSFPT KRVQVPQ LS TS PEK G E+ +D+ K S + ++N + EKGE++LSPFFWLR+ED E+ SQ +D DQ L ITPP +P+FSD+KDSDDE SK V GN H+ + FDSEMFEWTQ ACSP++ SSP KMQ T E Sbjct: 65 CIVKSMKSGSDCPVCKVPYRRREVRAAPHMDNLVSIYKSMEIASGFNIFVTQNPPPSTKLSDVQKQVGDDTDCGREDIGWICQDMLDEQLKISRQKDSRKLDESNMELCGPITSKPSFPTKKRVQVPQCSLSGTSAQPEKLQTGSREIKKDDFKNDSSVSRKNPVVDEKGERMLSPFFWLRDEDGEKSSQHTDMDQLLDITPPNVPTFSDIKDSDDENPPESSSKGAVCGNESHVADFFDSEMFEWTQRACSPDIFSSPAKMQAEKTTE 333 HSP 3 Score: 78.1814 bits (191), Expect = 5.197e-86 Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 3 Query: 99 KMGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209 KMGDP+HLEKMGRELKCPICLSLL++AVSLTCNHVFC Sbjct: 26 KMGDPTHLEKMGRELKCPICLSLLDTAVSLTCNHVFC 62
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: A0A0E0L4I8_ORYPU (Uncharacterized protein OS=Oryza punctata PE=4 SV=1) HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0 Identity = 391/1009 (38.75%), Postives = 541/1009 (53.62%), Query Frame = 2 Query: 329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTSAD------SGKRVKNDLNCCERMDNQGANKGRGSREAKSTETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENN----LGEKGEQILSPFFWLREEDVERPSQLSDGDQCLYITP--PGLPSFSDMKDSDDEGFSKEEVHGNRDHLNLFDSEMFEWTQGACSPELLSSPDK--------------------MQVADTYEPASQGASTAEPCNNGTCKITGHDASEEMLPNIESLRIQCVSSNKIRSCKSKELGKKQRKTAQKNIADRTSSHISGDHVNLGKGSEDFNKKQ---KDDCSSSSYLAKTRKNCKVAGLDHHVTEPMASHFSAKAPKQEDTPLAAIVG--MGKCGDENENLRMVKRCRKITAXXXXXXXXXXXXXXXXXXXXDTPKEVLTVCGQANEYMIQQKSSLP---VPLAHENAAEQFRK-GLSKHTREVK--------LAPTLKSEKNSGCKKKIKVYFSDDMKSWLPEDQQQQGGNANISLERVSEKVHGRTTVGNSESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQL--LIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202 C+ +SMKS S CPVCKVP RRRE+RPAPHMDNLVSI+KSME A+G N+ TQ+AP AD SGK K R + K + + + + S P + KPSF TNKR+QV +P SET + E+ +++ E ++ + D+ + N + G LSPFFWLRE++ E + + + TP PSFSD+KDSDDE + LFDSE+FEWTQ CSPEL S+P K M + +++ ++ A+ N K T + N + ++ ++ I+ + + G +RKTA + SS I G + + + N K D S SYL K + V D ++E + PK L I G M ++N R KR R+++ K V G NE I Q +L + NA Q + G K E++ +AP + K C+ K VY +++ +++Q + G GN ++ P A V L KCE T+K+ CAFC + TE SG MVHY G VP ++NGG+ +HSHKNC EWAP+VYFE+D NL EL+RSR+IKC+CCG+KGAALGC+E SCR++FH CAKL+ +CRWD +NFV+LCPLH SSKLPNE SE Q KR+ + ++I N + KW + S K VLCCS L+ EKE++SEF KLAGV + W SN+TH+IASTD +GACKRTLK LM IL G+WI++I WVK C++ M+ +DE K+E+T DVHGI DGPRLGR R+ ++QPKLFDG +FY+ GD+ SY+G LQD+++AAGGT+L RKP+S D L S + I+YS+E + + RRQ +A+AL ++G + VS++WV+ SI+AC L Sbjct: 39 CLTESMKSASTCPVCKVPFRRREMRPAPHMDNLVSIFKSMEAATGTNVVSTQEAPAVKVADGSDCVNSGKHSKRSQKPLARKRKVSSEKEKNTAKDAAASASHP-TTKPSFSTNKRIQVRPFPESETPIRVER----IMKPGEPKNNRNDDVEEGANKAVASAQPGSPSLSPFFWLREQEQEGCTAETLSETLSLDTPLRHNAPSFSDIKDSDDEIPLNTTPNSKAGATELFDSEIFEWTQRPCSPELYSTPLKKQSKAKNKLDQIEEKGDEEDMHIGGSFDKLGHASNAAQLVNT---KATKQKRKKTSPTNKNNAKLSNLAEPCIKKSDANQQGSNRRKTAALKSCQKNSSAI-GRNTSGRRNKASSNSKPIHCSSDYSPESYLPK--EGLDVEAPDKPLSERTQNLEKNSQPKGSARKLE-IAGKTMADTAEKNSEPRS-KRARRMSDHAIA-------------------KPVEVPSGSGNEAEIPQLHTLAKGSIQRKSSNARRQSKICGEQKSKNELENTIPNTATMAPIILHGK---CQNKEAVYTDPSVRTASVKNKQAKFSK--------RPDCFGTENFGN-----LQACP-ARNVLLKKCEVSTLKVSCAFCQTDVITEESGVMVHYQNGKQVPAEFNGGA--VHSHKNCLEWAPDVYFEDDSVFNLTTELARSRRIKCACCGIKGAALGCFEMSCRRSFHFTCAKLIPECRWDNENFVMLCPLHRSSKLPNENSEQQKQPKRKTTFKGITGFSRPSQIGSNQDCGNNWKWPS-GSPRKWVLCCSSLSGSEKELVSEFAKLAGVPISATWSSNVTHVIASTDLSGACKRTLKFLMAILNGRWIVSIDWVKTCMECMEPIDEHKFEVTTDVHGITDGPRLGRCRVIDRQPKLFDGMRFYLHGDYTKSYRGYLQDLVVAAGGTVLQRKPVSRDQQKLLDDSSD--LLIVYSLENQDRAKSKAETKAADRRQADAQALTCASGGRVVSSAWVIDSIAACNL 993 HSP 2 Score: 67.0106 bits (162), Expect = 9.023e-8 Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 3 Query: 102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209 M D LEKMGRELKCPICLSLL+SAVS++CNHVFC Sbjct: 1 MADMGSLEKMGRELKCPICLSLLSSAVSISCNHVFC 36
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: A0A067GIX5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001785mg PE=4 SV=1) HSP 1 Score: 547.354 bits (1409), Expect = 2.162e-174 Identity = 353/780 (45.26%), Postives = 474/780 (60.77%), Query Frame = 2 Query: 323 SVCILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQD-APLDTSAD--SGKRVKNDLNCCERMDNQGANKG-RGSREAKST-ETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENNLGEKGEQILSPFFWLR-EEDVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSK----EEVHGNRDHLNLFDSEMFEWTQGACSPELLSSPDKMQVADT------YEPASQGASTAEPCNNG--TCKITGHDASEEMLPNIESLRIQCVS-SNKIRSCKSKELGKKQRKTAQKNIADRTSSHISGDHVNLGKGSEDFNKKQKDDCSSSSYLAKT---RKNCKVAGL-DHHVTEPMASHFSAKAPKQEDTPLAAIVGMGKCGDENEN-LRMVKRCRKITAXXXXXXXXXXXXXXXXXXXXDTPKEVLTVCGQANEYMIQQKSSLPVPLAHENAAEQFRKGLSKHTREVKL-APTLKSEKNSGCKKKIKVYFSDDMKSWL-PEDQQQQGGNANISLERVSEKVHGRTTVGNSESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEK 2584 + CI+KSMKSGS+CPVCKVP RRE+R APHMDNLVS+YKSMEVASG NIFVTQD + +S D G++V C +++++QG +KG R R +K+T E S + KPS PT KRVQV QYPL ET P K GG ++ T E K SS +++EN + K +LSPFFWLR EED E+ SQ ++ D YITPP +PSFSD+KDS+D S+ EVHG D L+ F+SE+FEWTQ ACSPELL SP K QVAD E A QG++T +NG TC I E ++L + + +N I + K + G+K TAQK A R ++ S + SE+F +KQ S++ + K+ R C + D+ + + + + K + L +G + DE+ + ++ K+C KI +Q + C+K K++K+ +V+ + V V + + + Q S +P + E KG + T + + LK +K K++K FS K L E + Q+G ++ + + E V G + +G +++KL AL KCET+ KIQC+FC S E +EASGEMVHYY G V DYNGGSK+IHSH+NCTEWAPNVYFE+D INLEAEL+RSR+IKC CCGLKGAALGCYEK+CRK+FHVPCAKL+ QCRWD DNFV+LCPLH SS LPNE SQ RK + + +LL HN++ ++S W + E NKLVLCCS LTV E+ Sbjct: 38 NACIVKSMKSGSNCPVCKVPYHRREIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTG--GCQDKVEHQGTSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETD--AYITPPDVPSFSDLKDSEDISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTS-ISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT-FEDADKKESLLKGKTTKTAKKTKTSSNLKCDKELQWNKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIG-----VLEKLHKTQRGALRKCETLAHKIQCSFCHSSENSEASGEMVHYYNGKPVSADYNGGSKIIHSHRNCTEWAPNVYFEDDTVINLEAELARSRRIKCCCCGLKGAALGCYEKTCRKSFHVPCAKLILQCRWDTDNFVMLCPLHTSSNLPNENPGSQESRK-KCISKKLLTQHNKVAFKSDISTN-SWQSWE--NKLVLCCSALTVGEQ 802
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: A0A0B2PH80_GLYSO (Protein BREAST CANCER SUSCEPTIBILITY 1 like OS=Glycine soja GN=glysoja_032801 PE=4 SV=1) HSP 1 Score: 540.036 bits (1390), Expect = 1.722e-169 Identity = 260/431 (60.32%), Postives = 319/431 (74.01%), Query Frame = 2 Query: 1922 EKVHGRTTVGN-SESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKR---RNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202 E +H V + +++S K PL + AL KCE+ K QC FCLS EE+E SG MVHY +G V DY GGSKV H H+NCTEWAPNVYF+ D AINLEAE+SRSR+IKCS CGLKGAALGCYEKSCR++FHVPCA SQCRWD NFV+LCPLHASS LP E S SQ K+ + L H N + + + K+VLCCS L+V+E+E++SEFE+++ VLK WDS++TH+IASTDENGAC+RTLK+L+GILEGKWILNI+W+KAC+K M VDE +YEI +D+HGIRDGPRLGRLR+ NKQPKLF G KFY+MGDF PSYKG LQD+L+AAGG ILHRKP+SGD + + + IIYS+ELP KC P KK I S+R+ +AE LASSTG+K SN+W+L+SI+ACKL Sbjct: 559 ESIHQGPDVRDLNDTSKEKHCPLMDQTALRKCESHVTKYQCIFCLSSEESETSGPMVHYLDGRPVTADYEGGSKVTHCHRNCTEWAPNVYFDGDNAINLEAEISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCANWTSQCRWDTQNFVMLCPLHASSMLPCEGSGSQKRSKKCAASEGKNHGLKHDT---TNQSRAAHRSYK------KIVLCCSALSVQEREVVSEFERVSKAAVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGPVDEERYEINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYVMGDFIPSYKGYLQDLLVAAGGIILHRKPVSGDQESTSPDTHPYQTLIIYSLELPDKCKPLKKDTICSQRRHDAEVLASSTGSKVASNTWILNSIAACKL 980 HSP 2 Score: 234.572 bits (597), Expect = 9.059e-69 Identity = 139/270 (51.48%), Postives = 168/270 (62.22%), Query Frame = 2 Query: 329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDTSADSGKRVKNDLNCCERMDNQGANKGRGSREAK------------STETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENNLG---EKGEQILSPFFWLREE-DVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSK----EEVHGNRDHLNLFDSEMFEWTQGACSPELLSSPDKMQVADTYE 1078 C+ KSMKS S CPVCK+P RREVRPAPHMDNLVSIYK+ME ASG NIF TQ+AP+ +D K+ + D N +M+ G + GR + STE+S KPSFP KRVQVPQ LSET M K G L E+ +++ + E+ EK +LSPFFWLREE D ER SQ +D D+ + + P PSFSD+KDSDDE S +EV N+ +NLFDSEMFEWTQ C+PEL SSP KMQV DTYE Sbjct: 36 CVFKSMKSASACPVCKIPFTRREVRPAPHMDNLVSIYKNMEAASGVNIFETQNAPVTNLSDGEKQCEVDAN-SGKMEAGGTHTGRPREKKTRKKKESKKTVQASTESSGSDFAKPSFPAKKRVQVPQNLLSETPMKSLKIGVSLSEINKEKEGTEKVPVMESERPLQREKDNPVLSPFFWLREEKDGERLSQQTDDDEIIDGSTPNPPSFSDLKDSDDEIPSNVAPMDEVQ-NKGSVNLFDSEMFEWTQRPCTPELFSSPSKMQVMDTYE 303 HSP 3 Score: 56.9954 bits (136), Expect = 9.059e-69 Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 3 Query: 102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209 MGD LE+M REL CPIC SLL+SAVSLTCNH+FC Sbjct: 1 MGD---LERMARELICPICWSLLDSAVSLTCNHLFC 33
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: V7BTN7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G167200g PE=4 SV=1) HSP 1 Score: 535.413 bits (1378), Expect = 2.120e-166 Identity = 255/416 (61.30%), Postives = 312/416 (75.00%), Query Frame = 2 Query: 1955 SESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202 +++S K L + L KCE++ QC FCLS EE+E SG MVHY +G VP DY GG KV H H+NCTEWAPNVYF+ D AINLEAE+SRSR+I+CS CGLKGAALGCYEKSCR++FHVPCAK S CRWD NFV+LCPLHASS LP E S SQ R+ +G N P D + ++ S K+VLCCS L+V+EKEI+S+FE ++ VTVLK WDS++TH+IAST+ENGAC+RTLK+LMGILEGKWIL ++W+KAC+K M V E +YEI +DVHGIRDGPRLGRLR+ NKQPKLFDG KFY MGDF PSYKG LQD+++AAGG ILHRKP+SGD + LL + + IIYS+ELP KC PS I +R +AE LASSTG+K +N+W+L+SI+ACKL Sbjct: 687 NDASKEKHCSLTDKTVLRKCESLVKSYQCLFCLSSEESEVSGPMVHYLDGKPVPADYEGGFKVTHCHRNCTEWAPNVYFDGDNAINLEAEISRSRRIRCSFCGLKGAALGCYEKSCRRSFHVPCAKWTSLCRWDTQNFVMLCPLHASSMLPCEGSGSQ----ERSKKGPGRDGKNHGPSLD--TTRQTRADHRSYKKIVLCCSALSVQEKEIVSKFESVSKVTVLKNWDSSVTHVIASTEENGACRRTLKVLMGILEGKWILKVEWIKACMKEMNPVGEERYEINVDVHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFIPSYKGYLQDLVVAAGGIILHRKPVSGDQKSMLLDTHPYQTLIIYSLELPDKCKPSNTDTICRQRCHDAEVLASSTGSKVATNTWILNSIAACKL 1096 HSP 2 Score: 221.476 bits (563), Expect = 9.949e-66 Identity = 137/275 (49.82%), Postives = 160/275 (58.18%), Query Frame = 2 Query: 329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDT------SADSGKRVKNDLNCCERMDNQGANKGR------------GSREAKSTETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENNLG---EKGEQILSPFFWLREE-DVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSKEEVHGNRDH---LNLFDSEMFEWTQGACSPELLSSPDKMQVADTYE 1078 CI+KSMKS CPVCK+P RREVRPAPHMDNLVSIYK+MEVASG NIFVTQ+ D +ADSGK ++ G++KG + E+S KPSFP KRV VPQ LSET M K G L E +++ + + E+ EK +LSPFFWLREE D E SQ +D DQ + + P PSFSD+KDSDDE S R H +NLFDSEMFEWTQ CSPEL SSP KMQV DTYE Sbjct: 36 CIVKSMKSAFACPVCKIPFTRREVRPAPHMDNLVSIYKNMEVASGINIFVTQNVSQDVEKQCEGNADSGK-----------VEAGGSHKGHVQEKKTRKIKKVKKTVQTNMESSGSGFAKPSFPAKKRVLVPQNILSETPMKNLKLGDSLNEFNKEKEGVEKVSVMESERPLQIEKSVPVLSPFFWLREEKDGETLSQPADEDQIIDCSTPNPPSFSDLKDSDDEHTSNVAPFDERQHQISVNLFDSEMFEWTQRPCSPELFSSPSKMQVMDTYE 299 HSP 3 Score: 59.6918 bits (143), Expect = 9.949e-66 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 3 Query: 102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209 MGD LE+MG+ELKCPIC SL +SAVSLTCNH+FC Sbjct: 1 MGD---LERMGKELKCPICWSLFDSAVSLTCNHLFC 33
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Match: V7BSA9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G167200g PE=4 SV=1) HSP 1 Score: 535.028 bits (1377), Expect = 2.553e-166 Identity = 255/416 (61.30%), Postives = 312/416 (75.00%), Query Frame = 2 Query: 1955 SESSIVKKLPLANGVALHKCETITIKIQCAFCLSMEETEASGEMVHYYEGSSVPLDYNGGSKVIHSHKNCTEWAPNVYFENDKAINLEAELSRSRKIKCSCCGLKGAALGCYEKSCRKTFHVPCAKLVSQCRWDVDNFVILCPLHASSKLPNEKSESQGIRKRRNLRGQLLIHHNEIPINDEVSVQKKWNTCESGNKLVLCCSGLTVEEKEIMSEFEKLAGVTVLKRWDSNITHIIASTDENGACKRTLKILMGILEGKWILNIKWVKACIKAMKLVDELKYEITIDVHGIRDGPRLGRLRLQNKQPKLFDGCKFYIMGDFEPSYKGDLQDVLIAAGGTILHRKPISGDPGARLLGSPAFPIFIIYSVELPVKCDPSKKHMILSRRQLNAEALASSTGAKAVSNSWVLSSISACKL 3202 +++S K L + L KCE++ QC FCLS EE+E SG MVHY +G VP DY GG KV H H+NCTEWAPNVYF+ D AINLEAE+SRSR+I+CS CGLKGAALGCYEKSCR++FHVPCAK S CRWD NFV+LCPLHASS LP E S SQ R+ +G N P D + ++ S K+VLCCS L+V+EKEI+S+FE ++ VTVLK WDS++TH+IAST+ENGAC+RTLK+LMGILEGKWIL ++W+KAC+K M V E +YEI +DVHGIRDGPRLGRLR+ NKQPKLFDG KFY MGDF PSYKG LQD+++AAGG ILHRKP+SGD + LL + + IIYS+ELP KC PS I +R +AE LASSTG+K +N+W+L+SI+ACKL Sbjct: 689 NDASKEKHCSLTDKTVLRKCESLVKSYQCLFCLSSEESEVSGPMVHYLDGKPVPADYEGGFKVTHCHRNCTEWAPNVYFDGDNAINLEAEISRSRRIRCSFCGLKGAALGCYEKSCRRSFHVPCAKWTSLCRWDTQNFVMLCPLHASSMLPCEGSGSQ----ERSKKGPGRDGKNHGPSLD--TTRQTRADHRSYKKIVLCCSALSVQEKEIVSKFESVSKVTVLKNWDSSVTHVIASTEENGACRRTLKVLMGILEGKWILKVEWIKACMKEMNPVGEERYEINVDVHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFIPSYKGYLQDLVVAAGGIILHRKPVSGDQKSMLLDTHPYQTLIIYSLELPDKCKPSNTDTICRQRCHDAEVLASSTGSKVATNTWILNSIAACKL 1098 HSP 2 Score: 216.468 bits (550), Expect = 3.351e-64 Identity = 137/277 (49.46%), Postives = 160/277 (57.76%), Query Frame = 2 Query: 329 CILKSMKSGSDCPVCKVPCRRREVRPAPHMDNLVSIYKSMEVASGFNIFVTQDAPLDT------SADSGKRVKNDLNCCERMDNQGANKGR------------GSREAKSTETSDPISVKPSFPTNKRVQVPQYPLSETSMLPEKNGGGLIEVTEDESKMSSDILKENNLG---EKGEQILSPFFWLREE-DVERPSQLSDGDQCLYITPPGLPSFSDMKDSDDEGFSKEEVHGNRDH---LNLFDSEMFEWTQGACSPELLSSPDKM--QVADTYE 1078 CI+KSMKS CPVCK+P RREVRPAPHMDNLVSIYK+MEVASG NIFVTQ+ D +ADSGK ++ G++KG + E+S KPSFP KRV VPQ LSET M K G L E +++ + + E+ EK +LSPFFWLREE D E SQ +D DQ + + P PSFSD+KDSDDE S R H +NLFDSEMFEWTQ CSPEL SSP KM QV DTYE Sbjct: 36 CIVKSMKSAFACPVCKIPFTRREVRPAPHMDNLVSIYKNMEVASGINIFVTQNVSQDVEKQCEGNADSGK-----------VEAGGSHKGHVQEKKTRKIKKVKKTVQTNMESSGSGFAKPSFPAKKRVLVPQNILSETPMKNLKLGDSLNEFNKEKEGVEKVSVMESERPLQIEKSVPVLSPFFWLREEKDGETLSQPADEDQIIDCSTPNPPSFSDLKDSDDEHTSNVAPFDERQHQISVNLFDSEMFEWTQRPCSPELFSSPSKMQLQVMDTYE 301 HSP 3 Score: 59.6918 bits (143), Expect = 3.351e-64 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 3 Query: 102 MGDPSHLEKMGRELKCPICLSLLNSAVSLTCNHVFC 209 MGD LE+MG+ELKCPIC SL +SAVSLTCNH+FC Sbjct: 1 MGD---LERMGKELKCPICWSLFDSAVSLTCNHLFC 33 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 22
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BLAST of g.barbadense_cottongen_reftransV1_0098060 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098060 ID=g.barbadense_cottongen_reftransV1_0098060; Name=g.barbadense_cottongen_reftransV1_0098060; organism=Gossypium barbadense; type=contig; length=3566bpback to top |