g.barbadense_cottongen_reftransV1_0098040, g.barbadense_cottongen_reftransV1_0098040 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: ROK1_ASHGO (ATP-dependent RNA helicase ROK1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ROK1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 9.231e-26 Identity = 74/284 (26.06%), Postives = 136/284 (47.89%), Query Frame = 3 Query: 888 KE*RNPLFDSYSPTLLTSFLFVTRLMLVAF*VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGI--EHLRTSTLHKKIASA--RHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLD-VNHVVMFDFPLNS 1724 KE N +FD S FL R + VA ++KS++ A+ ++ +VS + D+++ TP R++ + ++ +KYL+ DEAD +FD+ F L S +L +AT+ +V++L Q I + +R HK+ A+ + E KL A+ Q+++ + + V++F ++ ++A+ H L ++++ H E QR + + +FKS GD L+CTD+ ARG+D +N V+ +D P ++ Sbjct: 204 KELANQIFDECSKLAQRIFLEKKRPLSVAL----LSKSLA--AKLKNQIVS------------DKKYDIIISTPLRLIDIVKSESLDLSAVKYLIFDEADKLFDKTFVEQTDDILSAC-------SHPNISKVLFSATLPSSVEELA----QSIMTDPVRVIIGHKEAANTNIEQKLVFCGNEEGKLVAIRQLIQEGMFRPP-VIIFLESITRAKALFHELLYDKLNVDVIHAERTQVQREKIIERFKS--GDLWCLICTDVLARGIDFKGINLVINYDVPRSA 455 HSP 2 Score: 58.9214 bits (141), Expect = 9.231e-26 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 2 Query: 491 SFEEL----GLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVL 772 SFE+L L + ++ + E PT IQC IP L+ + +V + TGSGKTLA+++PL+Q + D+A+ G K +++ PT+EL+ Q+ Sbjct: 120 SFEDLVTRFKLDKRLLSNLIENNFTEPTPIQCEAIPISLQNRDIVACAPTGSGKTLAFLIPLLQQVISDKAV-GTGVK-----GLIISPTKELANQIF 211
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_ASPFU (ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp2 PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 9.867e-26 Identity = 73/249 (29.32%), Postives = 129/249 (51.81%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARH---DFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK + ++P QT + +AT K V++L + + ++ SA H ++++ K + +++ LE + + N+ ++F T + + FL ++ ++ HG+ ++R LN+FK+ G P +V TD+A+RG+D+ D+ HV+ +D+P NS I I Sbjct: 221 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIVS-----QIRPD---RQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMD---LSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRSNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRI 456 HSP 2 Score: 33.113 bits (74), Expect = 9.867e-26 Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSLVAKKD 1933 DY+HR GRT R GAKG + ++ Sbjct: 451 DYIHRIGRTGRAGAKGTAITFFTTEN 476 HSP 3 Score: 59.3066 bits (142), Expect = 1.134e-7 Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G + V+ V+ G E PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P ++L PTREL+ Q+ Sbjct: 121 ENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLILAPTRELAVQI 210
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_CHAGB (ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=DBP2 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.726e-25 Identity = 69/248 (27.82%), Postives = 125/248 (50.40%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSL---AKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK +G ++P QT + +AT K V+ L + + ++ ++++ K + +++ LE + N++++F T + + FL ++ ++ HG+ +R L++FK+ G P +V TD+A+RG+D+ ++ HV+ +D+P NS I I Sbjct: 236 SRIRNTCVYGGVPKGPQTRDLSRGVEVCIATPGRLIDMLESGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPD---RQTCMWSATWPKEVRALASDFLTDFIQVNIGSMDLAANHRITQVVEVVNESEKRDKMIKHLEKIMEDKESQNKILIFTGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 473 HSP 2 Score: 33.113 bits (74), Expect = 1.726e-25 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R GAKG + Sbjct: 468 DYIHRIGRTGRAGAKGTAITF 488 HSP 3 Score: 58.151 bits (139), Expect = 2.446e-7 Identity = 38/99 (38.38%), Postives = 50/99 (50.51%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P +VL PTREL+ Q+ Sbjct: 136 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 225
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP3_USTMA (ATP-dependent RNA helicase DBP3 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=DBP3 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.673e-25 Identity = 84/248 (33.87%), Postives = 127/248 (51.21%), Query Frame = 3 Query: 1041 GGGRLRSQEDSLNN--PIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL------------------GENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLN 1721 GG + Q LN P+ +VVGTPGRVL DG++ + YLVLDEAD M D+GF PDIR +G K+R +G T + +AT AV+ L + G +R + ++++ R ++E ++VL AK R+ F ++N+ R+ D L G ++S + HG++ +R+ +L +FKS + P LV TD+AARGLD+ +V HVV + FPL Sbjct: 275 GGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEADRMLDKGFEPDIRAIIGMCKSRE-----EGRHTSMFSATWPPAVRGLAESFMNG--PVRVTVGSDELSANR-----------RVEQTVEVLADGYAKERRLNDFLRSVNAQRSKDKILIFALYKKEAQRIEQTLRRGGFKVSGI--HGDLGQNERIASLERFKS--AETPLLVATDVAARGLDIPNVEHVVNYTFPLT 500
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_NEUCR (ATP-dependent RNA helicase dbp2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=drh-1 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.308e-25 Identity = 69/248 (27.82%), Postives = 126/248 (50.81%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSL---AKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK +G ++P QT++ +AT K V+ L + + ++ ++++ K + +++ LE + N++++F T + + FL ++ ++ HG+ +R L++FK+ G P +V TD+A+RG+D+ ++ HV+ +D+P NS I I Sbjct: 232 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPD---RQTLMWSATWPKEVRNLAADFLTDFIQVNIGSMDLAANHRITQIVEVVSESEKRDRMIKHLEKIMEGRENQNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 469 HSP 2 Score: 33.113 bits (74), Expect = 3.308e-25 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R GAKG + Sbjct: 464 DYIHRIGRTGRAGAKGTAITF 484 HSP 3 Score: 58.151 bits (139), Expect = 2.956e-7 Identity = 35/94 (37.23%), Postives = 48/94 (51.06%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP + + +L P ++L PTREL+ Q+ Sbjct: 132 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQP----LLAPGDGPIVLILAPTRELAVQI 221
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DDX4_PIG (Probable ATP-dependent RNA helicase DDX4 OS=Sus scrofa GN=DDX4 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.282e-25 Identity = 80/252 (31.75%), Postives = 129/252 (51.19%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLH---KKIASARHDFIKL---LGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLD-VNHVVMFDFP 1715 ++ A+ S R+ ++ GG +L + +++ TPGR++ I + IKYLVLDEAD M D GFGP+++K + + PS + QT++ +AT + +Q+L E L+++ L ++ A D + +G +K E LL++L R MVF T + + FL + +IST + HG+ +R + L F+ G CP LV T +AARGLD++ V HV+ FD P Sbjct: 379 IYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLI----SCPGMPSKEQRQTLMFSATFPEEIQRLA------AEFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKLLEILRN--IGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRF--GKCPVLVATSVAARGLDIENVQHVINFDLP 616
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DDX4_MOUSE (Probable ATP-dependent RNA helicase DDX4 OS=Mus musculus GN=Ddx4 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 8.458e-25 Identity = 79/252 (31.35%), Postives = 128/252 (50.79%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLH---KKIASARHDF---IKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLD-VNHVVMFDFP 1715 ++ A+ S R+ ++ GG + + +++ TPGR++ I + +KYLVLDEAD M D GFGP+++K + + PS + QT+L +AT + +Q+L + L++S L ++ A D I +G +K E L+++L R MVF T + + FL + +IST + HG+ +R + L F+ G CP LV T +AARGLD++ V HV+ FD P Sbjct: 354 IYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLI----SCPGMPSKEQRQTLLFSATFPEEIQRLAG------DFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRN--IGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRC--GKCPVLVATSVAARGLDIENVQHVINFDLP 591
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DDX4_BOVIN (Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus GN=DDX4 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.113e-24 Identity = 79/252 (31.35%), Postives = 129/252 (51.19%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLH---KKIASARHDF---IKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLD-VNHVVMFDFP 1715 ++ A+ S R+ ++ GG +L + +++ TPGR++ I + +KYLVLDEAD M D GFGP+++K + + PS + QT++ +AT + +Q+L E L+++ L ++ A D I +G +K E L+++L R MVF T + + FL + +IST + HG+ +R + L F+ G CP LV T +AARGLD++ V HV+ FD P Sbjct: 383 IYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLI----SCPGMPSKEQRQTLMFSATFPEEIQRLAG------EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRN--IGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRC--GKCPVLVATSVAARGLDIENVQHVINFDLP 620
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DED1_MAGO7 (ATP-dependent RNA helicase DED1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DED1 PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.413e-24 Identity = 76/261 (29.12%), Postives = 130/261 (49.81%), Query Frame = 3 Query: 936 TSFLFVTRLMLVAF*VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFP 1715 TS + LV+ ++ ++ ++ + R +V GG + SQ + D++V TPGR++ I+ G + +IKYLVLDEAD M D GF P IR+ + P+ Q QT++ +AT +Q+L + + L + + +++ ++K+ LL +L S G ++F T ++ + FL + + HG+ +R L F++ G CP LV T +AARGLD+ +V HV+ +D P Sbjct: 276 TSLILAPTRELVSQ-IYDESRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIV----EGEDMPNVQDRQTLMFSATFPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLDLL--STHGGGLTLIFVETKRNADELSDFLQNQNLPATSIHGDRTQRERERALEMFRT--GRCPILVATAVAARGLDIPNVTHVINYDLP 527
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DDX4_MACFA (Probable ATP-dependent RNA helicase DDX4 OS=Macaca fascicularis GN=DDX4 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.507e-24 Identity = 79/252 (31.35%), Postives = 129/252 (51.19%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLH---KKIASARHDF---IKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLD-VNHVVMFDFP 1715 ++ A+ S R+ ++ GG +L + +++ TPGR++ I + IKYLVLDEAD M D GFGP+++K + + PS + QT++ +AT + +Q+L E L+++ L ++ A D + +G +K E L+++L R MVF T + + FL + +IST + HG+ +R + L F+ G CP LV T +AARGLD++ V HV+ FD P Sbjct: 382 IYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLI----SCPGMPSKEQRQTLMFSATFPEEIQRLA------AEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRN--IGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRC--GKCPVLVATSVAARGLDIENVQHVINFDLP 619
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: F6HJE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02530 PE=4 SV=1) HSP 1 Score: 477.248 bits (1227), Expect = 6.642e-153 Identity = 226/249 (90.76%), Postives = 236/249 (94.78%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLN PIDMVVGTPGRVLQHI++GNMVYG+IKYLVLDEADTMFDRGFGPDIRKFL PLKNRA K QGFQT+LVTATMTKAVQKLIDEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFLGENQI TVNYHGEVP EQRVENL KFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 212 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNIPIDMVVGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKSDDQGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLKKFKTEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 460 HSP 2 Score: 206.453 bits (524), Expect = 3.518e-53 Identity = 119/192 (61.98%), Postives = 135/192 (70.31%), Query Frame = 2 Query: 245 SRVFRGFKPFCSAPSPILTTIDPDD----LKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 +RVF GFKP + S T I+ D ++HS+LLE+LR RHLK SAK P + PP L G+E E KK K M SFEELGLSEEVM AVRE GI VPTEIQCIG+P VLE +SVVLGSHTGSGKTLAYMLPLVQLLRRDEA+ G+L KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 40 TRVFLGFKPISCSSSSSTTAIEADQALQPMRHSILLEKLRFRHLKDSAKSPQTRS--PP--LSTGGKEGEPGSMKSQKKPK--MVSSFEELGLSEEVMAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLLRRDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 225 HSP 3 Score: 137.887 bits (346), Expect = 1.795e-30 Identity = 75/109 (68.81%), Postives = 83/109 (76.15%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKA-------VSASVRTSGKEPTIAKSVK 2158 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLA RIEEAIRKNESLE+LT DN+RRD AR +I+EQK KN L K S KNKTK +AS +TSG++ KS K Sbjct: 460 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKTKVESMKSSSKAASTQTSGRKTLGGKSGK 568
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A059BSP8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02678 PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 7.636e-153 Identity = 224/249 (89.96%), Postives = 239/249 (95.98%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGR+R QEDSLNNPIDMVVGTPGR+LQHI++GN+VYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALK G GFQT+LVTATMT AVQKL+DEEFQGIEHLRTSTLHKKIASARHDFIK+ GSENKLE+LLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP EQRVENL KFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 290 VFRVAKSISHHARFRSTMVSGGGRIRPQEDSLNNPIDMVVGTPGRLLQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKSDGLGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIASARHDFIKISGSENKLESLLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLHENQISTVNYHGEVPAEQRVENLKKFKNEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 538 HSP 2 Score: 181.03 bits (458), Expect = 3.037e-44 Identity = 104/169 (61.54%), Postives = 119/169 (70.41%), Query Frame = 2 Query: 320 LKHSMLLERLRTRHLKHS-----AKLPSSSPSMPPQNLPVLGQETEAYDXX-XXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 +KH+MLLERLR RHLK + ++ P S P + EA + + +KKK M SFEELGLSEEVM AVRE IEVPTEIQC+GIP VLE KSVVLGSHTGSGKTLAY+LPLVQLLRRDE + G L KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 139 MKHTMLLERLRMRHLKDAPNPQQSRTPESEGGSKMARRP----KEEALEVEGEKRKKKAAMVGSFEELGLSEEVMRAVRETAIEVPTEIQCLGIPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEELYGRLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 303 HSP 3 Score: 138.658 bits (348), Expect = 2.310e-30 Identity = 96/187 (51.34%), Postives = 117/187 (62.57%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTK----------AVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNR--SVGG----------------SSEGKKLKVVGFRGQASS-SKR 2326 IDYLHRTGRTARMGAKGKVTSLVAKKD LLA RIEEAIRKNESLE+LTVDNVRRD AR+RI+EQKGKN KL K S+ + K K +AS + G++ K++K+++ AKP++ + A+ + K R SVG S+ KL VVGFRG+ SS SKR Sbjct: 538 IDYLHRTGRTARMGAKGKVTSLVAKKDHLLATRIEEAIRKNESLEALTVDNVRRDIARSRISEQKGKNTKLSKVSDQRYKGKPAATRSSNSHTKAASSQIPGRKTAGTKALKTSSSAKPARVA-------KPARAVKISKVTRPFSVGKSAKSSTKSSSNGRKQTQSKSGKLSVVGFRGRNSSLSKR 717
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: M5VNC9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002766mg PE=4 SV=1) HSP 1 Score: 475.322 bits (1222), Expect = 3.358e-152 Identity = 223/249 (89.56%), Postives = 237/249 (95.18%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF V+K +SHHARFRSTMVSGGGRLR QEDSLNNPI+MVVGTPGRVLQHI+DGN+VYGDIKY+VLDEADTMFDRGFGPDIRKFL PLK+RA KP GQGFQT+LV+ATMTKAVQ LIDEEFQGI HLRTS+LHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTL+SSRAVDHFL ENQISTVNYHGEVP EQRVENL KFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 215 VFRVSKFVSHHARFRSTMVSGGGRLRPQEDSLNNPIEMVVGTPGRVLQHIEDGNLVYGDIKYVVLDEADTMFDRGFGPDIRKFLVPLKHRASKPDGQGFQTVLVSATMTKAVQTLIDEEFQGILHLRTSSLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLSSSRAVDHFLNENQISTVNYHGEVPAEQRVENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 463 HSP 2 Score: 196.052 bits (497), Expect = 1.453e-49 Identity = 116/214 (54.21%), Postives = 145/214 (67.76%), Query Frame = 2 Query: 206 SPKHFSYYPFLKPSRVFRGFKPFCSAPSPILT----TIDPDD-----LKHSMLLERLRTRHLKHSAK-LPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV-----LVTHPAMIWTS 802 + K FS K + V GF+P C+A + ++ I+ ++ LKHS+LLE+LR RHLK SAK S++P+ P Q Q + K + KKK+++ ++F LGL+EEV+ AVREMGIE PTEIQCIGIP VLE K+VVLGSHTGSGKTLAYMLPL QLLRRDEA G+ KPRRPRAVVLCPTRELSEQV V+H A ++ Sbjct: 25 AAKRFSLIKLPKTTGVLTGFRPLCTATTTTISIPESAIEAEEQETQPLKHSLLLEKLRLRHLKSSAKPQTSANPNGPAQR-----QSEDGLGKPENKKKREV--ENFGGLGLTEEVLAAVREMGIEAPTEIQCIGIPAVLEGKTVVLGSHTGSGKTLAYMLPLAQLLRRDEAENGIQMKPRRPRAVVLCPTRELSEQVFRVSKFVSHHARFRST 231 HSP 3 Score: 134.42 bits (337), Expect = 3.065e-29 Identity = 90/176 (51.14%), Postives = 110/176 (62.50%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGG-----------SSEGKKLKVVGFRGQAS-SSKRESFTPS 2344 IDYLHRTGRTARMGAKGKVTSLVAKK+L+LA RIEEAI+KNESLESL+VD+VRRD AR+RI KG L + SN KNK+++ SA + +KSVK + + K S S + + + + +K S G S KL VVGFRG+AS S KRES S Sbjct: 463 IDYLHRTGRTARMGAKGKVTSLVAKKNLMLANRIEEAIKKNESLESLSVDSVRRDIARSRIAPLKG---NLVRVSNQKNKSRSASAPAKFGKASFQASKSVKPSNASTSRKASSSASSSRKGSSSPSNSRKAPSSGKRQPESRRSSVVKSTASKLSVVGFRGRASWSDKRESVASS 635
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: I1JDA7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 1.556e-151 Identity = 226/249 (90.76%), Postives = 234/249 (93.98%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFR TMVSGGGRLR QEDSLNNPID+VVGTPGRVLQHI++GNMVYGDIKYLVLDEADTMFDRGFGPDIRKF+GPLKNRA KP G GFQTILVTATMTKAVQ LIDEEF GI HLRTSTLHKKI+SARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTL+SSRAVDHFLGENQIS VNYHGEVP EQRVENL KFKSD DCPTLVCTDLAARGLDLDV+HVVMFDFPLNS+ Sbjct: 222 VFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDVVVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFIGPLKNRASKPDGLGFQTILVTATMTKAVQNLIDEEFLGIVHLRTSTLHKKISSARHDFIKLAGSENKLEALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHFLGENQISAVNYHGEVPAEQRVENLRKFKSDGDDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSI 470 HSP 2 Score: 195.282 bits (495), Expect = 2.190e-49 Identity = 115/193 (59.59%), Postives = 133/193 (68.91%), Query Frame = 2 Query: 230 PFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 P KP +FR F+P CS + D KHS+LLERLR+RHL+ +AK ++P P+ + A K+KK SFEELGLSEEVMGAVREMGIEVPTEIQ IGIP VLEEKSVVLGSHTGSGKTLAY+LPL QLLRRDE + G+L KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 51 PLPKPLPLFRRFRPLCSVSAAAPEAAD---AKHSILLERLRSRHLRDAAK---AAPE--PRKKEKVAAAAAAAAAAAEAKEKKKAVASFEELGLSEEVMGAVREMGIEVPTEIQSIGIPAVLEEKSVVLGSHTGSGKTLAYLLPLAQLLRRDEQLNGILLKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 235 HSP 3 Score: 119.398 bits (298), Expect = 2.120e-24 Identity = 77/163 (47.24%), Postives = 97/163 (59.51%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRI-TEQKGKNVKLFKTSNLKNKTKAVSASVRT-SGKEPTIAKSVKSTXX--XXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRE 2329 IDYLHRTGRTARMGAKGKVTSLVAKKDL LA +IE+A+RKNESLE++T ++VRRD ART+ + +KGK+ +L K S + K+ + S SG + VKS + SL A T + S KL VVGFRG+ SSS + Sbjct: 470 IDYLHRTGRTARMGAKGKVTSLVAKKDLDLASKIEDALRKNESLEAITKESVRRDIARTQNQSTEKGKSKRLVKVSKVMGKSGSRFGSGNNGSGMKSGKGSPVKSMKKGIQVSKSGKSSSANSLRKASTEKRQSSKMVSATKSTNSKLNVVGFRGKNSSSNNK 632
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A068TXU1_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_6 OS=Coffea canephora GN=GSCOC_T00034653001 PE=4 SV=1) HSP 1 Score: 468.774 bits (1205), Expect = 2.352e-151 Identity = 220/249 (88.35%), Postives = 235/249 (94.38%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 V+ VAKSISHHARFRSTMVSGGGRLR QEDSLN PID++VGTPGRVLQHI++GNMVYGDI+YLVLDEADTMFDRGFGPDIRKFLGPLKNRA K G GFQT+LV+ATMTKAVQKL+DEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSL+KGNRVMVFCNTLNSSRAVDHFL EN ISTVNYHGEVP E+RVENL KFKS+DGDCPTLVCTDLAARGLDLDV+HV+MFDFPL S+ Sbjct: 82 VYRVAKSISHHARFRSTMVSGGGRLRPQEDSLNTPIDLIVGTPGRVLQHIEEGNMVYGDIRYLVLDEADTMFDRGFGPDIRKFLGPLKNRASKHDGLGFQTVLVSATMTKAVQKLVDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHFLHENGISTVNYHGEVPAEERVENLEKFKSEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLTSI 330 HSP 2 Score: 142.895 bits (359), Expect = 2.049e-32 Identity = 68/82 (82.93%), Postives = 73/82 (89.02%), Query Frame = 2 Query: 524 MGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769 MGA+ E+ I VPTEIQCIGIP VL KSVVLGSHTGSGKTLAYMLPLVQLLRRDEA+ G+L +PRRPRAVVLCPTREL EQV Sbjct: 1 MGALEELSISVPTEIQCIGIPAVLAGKSVVLGSHTGSGKTLAYMLPLVQLLRRDEALNGILMRPRRPRAVVLCPTRELCEQV 82 HSP 3 Score: 131.339 bits (329), Expect = 8.616e-29 Identity = 86/175 (49.14%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPT------------------IAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGG-----SSEGKKLKVVGFRGQ 2308 IDYLHRTGRTARMGAKGKVTSLVAKKD +LA RIEEAI KNESLESL+V +V+RD AR RI EQKGK+VKL K S K+K A +AS ++SG + ++ +++ +K KVSK+ A +S + ++ G SS KL VVGFRG+ Sbjct: 330 IDYLHRTGRTARMGAKGKVTSLVAKKDQILATRIEEAILKNESLESLSVGSVQRDIARARINEQKGKSVKLLKAS--KHKKTATAASAKSSGADSKAKPKKGLSKNGAGGKVDLTKRTFRTSPGSKSVTATAKVSKNFSGANSSKAKVSHKEFQGRKPDVSSSRSKLNVVGFRGR 502
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: W9R456_9ROSA (DEAD-box ATP-dependent RNA helicase 39 OS=Morus notabilis GN=L484_002724 PE=4 SV=1) HSP 1 Score: 472.626 bits (1215), Expect = 3.810e-151 Identity = 221/249 (88.76%), Postives = 233/249 (93.57%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLN IDMVVGTPGR+LQHI DGN+VYGDIKY+VLDEADTMFD GFGPDIRKFLGPLKNRA KP GQGFQT+LV ATMTKAVQ LIDEEFQGI HLRTSTLHKK+ASARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQ STVNYHGEVP EQRVENL KFK++DGDCPTLVC+DLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 221 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNGAIDMVVGTPGRILQHIQDGNIVYGDIKYVVLDEADTMFDHGFGPDIRKFLGPLKNRASKPDGQGFQTVLVAATMTKAVQNLIDEEFQGIVHLRTSTLHKKVASARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLSENQTSTVNYHGEVPAEQRVENLKKFKTEDGDCPTLVCSDLAARGLDLDVDHVIMFDFPLNSI 469 HSP 2 Score: 185.652 bits (470), Expect = 4.998e-46 Identity = 133/237 (56.12%), Postives = 158/237 (66.67%), Query Frame = 2 Query: 146 MQKAMMAATSRTLLFVSLLS---------SPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTT-------IDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 MQ AM AT++TLL +SL S + K FS KP+R++ GF+P ++ + T I P LKHS+LLERLR RHLK SAK + S + +G E KKK+K++ SFEELGLS+EVMGAVREMGIEVPTEIQ IGIP VLE KSVVLGSHTGSGKTLAYMLPLVQL+R+DEA+ GML KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 1 MQLAMGGATAKTLLTISLSSHLSSLSRFSAAKRFSLLRPPKPTRIYPGFRPLRTSATTTETETVDTDDTIQP--LKHSILLERLRLRHLKDSAKPQETKTSTKKNSDENVGLEKLKESGYGDKKKQKVVG-SFEELGLSDEVMGAVREMGIEVPTEIQSIGIPAVLEGKSVVLGSHTGSGKTLAYMLPLVQLMRQDEAMFGMLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 234 HSP 3 Score: 129.413 bits (324), Expect = 1.017e-27 Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVS 2107 IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA+RKNESLESL+V++VRRD AR RITEQKGKN KL K + +++ A S Sbjct: 469 IDYLHRTGRTARMGAKGKVTSLVAKKDVALATRIEEAMRKNESLESLSVNSVRRDIARARITEQKGKNEKLIKVAKQRSRDSAKS 553
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: M0U4C7_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 465.692 bits (1197), Expect = 1.752e-150 Identity = 216/249 (86.75%), Postives = 233/249 (93.57%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTM+SGGGRLR QEDSL+ PIDMVVGTPGR+LQHI+DGNMVYGDIK+LVLDEADTMFD+GFGPDIRKFLGPLKNRA KP GFQT+LVTATMTKAVQ L+DEEFQGI HLRTS+ KK+ASARHDFIKL G+ENKLEALLQVLEPSL+KGNRVMVFCNTLNSSRAVDHFL ENQI TVNYHGEVP E+RVENL KFKS+DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 76 VFRVAKSISHHARFRSTMISGGGRLRPQEDSLSEPIDMVVGTPGRILQHINDGNMVYGDIKFLVLDEADTMFDQGFGPDIRKFLGPLKNRAAKPGDHGFQTVLVTATMTKAVQNLVDEEFQGIIHLRTSSFQKKVASARHDFIKLSGAENKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHFLTENQIFTVNYHGEVPAEERVENLRKFKSEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 324 HSP 2 Score: 130.954 bits (328), Expect = 1.085e-28 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 542 MGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 M I VPTEIQCI +P VLE KSVVLGSHTGSGKTLAYMLP+VQL+R+DEA+ G+L +PRRPRAVVLCPTREL EQV ++ + F Sbjct: 1 MEISVPTEIQCIAVPAVLEGKSVVLGSHTGSGKTLAYMLPIVQLMRQDEALSGVLMRPRRPRAVVLCPTRELCEQVFRVAKSISHHARF 89 HSP 3 Score: 114.39 bits (285), Expect = 2.146e-23 Identity = 74/165 (44.85%), Postives = 102/165 (61.82%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKS-TXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344 IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA++KNESLE+L+ ++VRRD ++ +QK K + S+ K KA SA + + + S KS T A V E + + +++ +SV KL VVGFRG++S+ +++S P+ Sbjct: 324 IDYLHRTGRTARMGAKGKVTSLVAKKDIPLATRIEEAMKKNESLEALSANSVRRDAFISKQIDQKYKAKVILTKSSSKAGKKATSAQKSVAASKGKASASTKSKTTVAISKPIKSPVGGKREPTRGNKLQQGRKSVITRIPKSKLSVVGFRGRSSAGRKQSPKPT 488
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: K4DG05_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc12g056740.1 PE=4 SV=1) HSP 1 Score: 468.774 bits (1205), Expect = 1.069e-149 Identity = 219/249 (87.95%), Postives = 234/249 (93.98%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QED L +PIDM+VGTPGRVLQHI++GNMVYGDI+YLVLDEADTMFDRGFGPDIRKFL PLKNRA K +GFQT+LVTATMTKAVQKL+DEEFQGIEHLRTS+LHKKIASARHDFIKL GSENK+EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL E QISTVNYHGEVP EQRVENL KFKS++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+ Sbjct: 204 VFRVAKSISHHARFRSTMVSGGGRLRPQEDCLASPIDMIVGTPGRVLQHIEEGNMVYGDIRYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKTDDEGFQTVLVTATMTKAVQKLVDEEFQGIEHLRTSSLHKKIASARHDFIKLSGSENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLNETQISTVNYHGEVPAEQRVENLAKFKSNEGDCPTLVCTDLAARGLDLDVDHVIMFDFPKNSI 452 HSP 2 Score: 170.629 bits (431), Expect = 4.426e-41 Identity = 127/226 (56.19%), Postives = 149/226 (65.93%), Query Frame = 2 Query: 161 MAATSRTLLFVSLLSSPKHF--SYYPFL-KPSRVFRGFKPFCS----APSPILTTIDPDDL---KHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 M T R LL +SLL P F + P L +P RV+ GF+P S APS + D L KHS+LLERLR RHL+ S K P+S ++ ++ E D G K KKK +A SFEELGL+EEVMGA+ EMGI PTEIQ IGIP V+E KSVVLGSHTGSGKTLAYMLP+VQLLRRDE + GML KPRRPRAVVLCPTREL EQV ++ + F Sbjct: 1 MGVTGRALLNLSLL--PFRFPLTRNPLLPQPRRVYLGFRPLSSTTTTAPSYAAVAEEEDALQPVKHSILLERLRLRHLRESPK-PNSEIKQ------LVRKQVEVDDGGVKKSKKKAVASSFEELGLTEEVMGALGEMGISEPTEIQSIGIPAVIEGKSVVLGSHTGSGKTLAYMLPIVQLLRRDEELDGMLMKPRRPRAVVLCPTRELCEQVFRVAKSISHHARF 217 HSP 3 Score: 125.946 bits (315), Expect = 1.526e-26 Identity = 85/172 (49.42%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAV---SASV-------RTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTS-AVRKKNRSVGGSSEG---------KKLKVVGFRGQ 2308 IDYLHRTGRTARMGAKGKVTSL+AKKDLLLA IEEAI+KNESLESL+VD ++RD AR+RITEQK K K K SN + K A S+SV + S K +S K+T + + K + V KK S G KKL VVGFRG+ Sbjct: 452 IDYLHRTGRTARMGAKGKVTSLIAKKDLLLANCIEEAIKKNESLESLSVDGIKRDNARSRITEQKDKREKSVKVSNSRGKATASTGKSSSVTRKTIDSKRSAKTTDSKRSPKTTDSKRSPGTKFGKVPAKSKPKIAMKVSKKTSSSTGKRRVDSRSSSVSTKKLNVVGFRGR 623
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: M1C4K2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023195 PE=4 SV=1) HSP 1 Score: 467.233 bits (1201), Expect = 4.442e-149 Identity = 219/249 (87.95%), Postives = 233/249 (93.57%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTM+SGGGRLR QED L +PIDM+VGTPGRVLQHI++GNMVYGDIKYLVLDEADTMFDRGFGPDIRKFL PL NRA K QGFQT+LVTATMTKAVQKL+DEEFQGIEHLRTS+LHKKIASARHDFIKL GSENK+EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL E QISTVNYHGEVP EQRVENL KFKS++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+ Sbjct: 206 VFRVAKSISHHARFRSTMISGGGRLRPQEDCLASPIDMIVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLNNRASKTGDQGFQTVLVTATMTKAVQKLVDEEFQGIEHLRTSSLHKKIASARHDFIKLSGSENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLNETQISTVNYHGEVPAEQRVENLAKFKSNEGDCPTLVCTDLAARGLDLDVDHVIMFDFPKNSI 454 HSP 2 Score: 167.933 bits (424), Expect = 3.806e-40 Identity = 125/228 (54.82%), Postives = 146/228 (64.04%), Query Frame = 2 Query: 161 MAATSRTLLFVSLLSSPKHFSYYPFL-KPSRVFRGFKPFCS----APS-------PILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 M T R LL +SLL + P L P RV+ GF+P S APS + P +KHS+LLERLR RHLK S K P+S ++ ++ E D G K KKK +A SFEELGL+EEVMGA+ EMGI PTEIQ IGIP V+E KSVVLGSHTGSGKTLAYMLP+VQLLRRDE + GML KPRRPRAVVLCPTREL EQV ++ + F Sbjct: 1 MGVTGRALLNLSLLPFRFPLTRNPLLPHPRRVYLGFRPLSSTITTAPSYAAAAAAEEEDALQP--VKHSILLERLRLRHLKESPK-PNSEIKQ------LVRKQAEVDDGGVKKSKKKAVASSFEELGLTEEVMGALGEMGISEPTEIQSIGIPAVIEGKSVVLGSHTGSGKTLAYMLPMVQLLRRDEELDGMLMKPRRPRAVVLCPTRELCEQVFRVAKSISHHARF 219 HSP 3 Score: 123.635 bits (309), Expect = 7.338e-26 Identity = 61/80 (76.25%), Postives = 68/80 (85.00%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNK 2092 IDYLHRTGRTARMGAKGKVTSL+AKKDLLLA IEEAI+KNESLESL+VD ++RD AR+RITEQK K K K SN + K Sbjct: 454 IDYLHRTGRTARMGAKGKVTSLIAKKDLLLANCIEEAIKKNESLESLSVDGIKRDNARSRITEQKDKREKSVKVSNSRGK 533
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: K3XFN8_SETIT (Uncharacterized protein OS=Setaria italica GN=Si000707m.g PE=4 SV=1) HSP 1 Score: 462.996 bits (1190), Expect = 1.172e-147 Identity = 213/249 (85.54%), Postives = 232/249 (93.17%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 V+ VAKSISHHARFRSTMVSGG RLR QEDSLN P+DMVVGTPGR+L HI DGNMVYGDIKYLVLDEADTMFD+GFGPDIRKFL PLKNRA KP QGFQT+LVTATMTKAVQKLIDEEF+GI HLRTST K++A+ARHDFIKL GSENKLEALLQVLEPSLAKGN++MVFCNTLNSSRAVDHFL ENQISTVNYHGEVP E+RVENLNKF++++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+ Sbjct: 192 VYRVAKSISHHARFRSTMVSGGTRLRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRATKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTSTFQKRVATARHDFIKLTGSENKLEALLQVLEPSLAKGNKIMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSI 440 HSP 2 Score: 165.622 bits (418), Expect = 1.741e-39 Identity = 84/127 (66.14%), Postives = 100/127 (78.74%), Query Frame = 2 Query: 389 SSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769 SP++PP+ G E + +G++ + A+SFEELGL EEVM A+ EMGI PTEIQC+G+P VL+ SVVLGSHTGSGKTLAY+LPLVQLLRRDEA+LGM KPRRPRAVVLCPTREL+EQV Sbjct: 68 GSPNLPPRGKAARGGERTSQHPQQGRRVEA--AESFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLDGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQV 192 HSP 3 Score: 103.219 bits (256), Expect = 2.137e-19 Identity = 77/178 (43.26%), Postives = 103/178 (57.87%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTS------NLKNKTKAV--SASVRTSGKE--------PTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGG--SSEGKKLKVVGFRGQASSSKRES 2332 IDYLHRTGRTARMGAKGKVTSLVAKK++ LA +IEEA++KNESLE+LT +NVRR A + KG+ + KTS N K + V S S RT P I K +A + +K + + S++ +K+ A ++ G + G KL VVGFRG++S +S Sbjct: 440 IDYLHRTGRTARMGAKGKVTSLVAKKNVALATKIEEAMKKNESLEALTTNNVRR-AANPQSASTKGRTSRSAKTSSALKVVNQKGRRGVVLSSKSSRTPKDTTSTRRRLPPKIQPKAKKSAAPQKAKLVKPANNSVKVSKSKAKPAGRKAKGDILNKLGTKLSVVGFRGRSSGKSAQS 616 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098040 ID=g.barbadense_cottongen_reftransV1_0098040; Name=g.barbadense_cottongen_reftransV1_0098040; organism=Gossypium barbadense; type=contig; length=2758bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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