g.barbadense_cottongen_reftransV1_0098040, g.barbadense_cottongen_reftransV1_0098040 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: RH39_ORYSJ (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica GN=Os01g0184500 PE=2 SV=1) HSP 1 Score: 461.455 bits (1186), Expect = 6.234e-149 Identity = 213/249 (85.54%), Postives = 232/249 (93.17%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGG R+R QEDSLN P+DMVVGTPGR+L HI DGNMVYGDIKYLVLDEADTMFD+GFGPDIRKFL PLKNRA KP QGFQT+LVTATMTKAVQKLIDEEF+GI HLRT+T K++A+ARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP E+RVENLNKF++++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+ Sbjct: 203 VFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSI 451 HSP 2 Score: 174.096 bits (440), Expect = 3.384e-44 Identity = 93/162 (57.41%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 323 KHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 +H +LLERLR RHLK +P+++P + G A + + ++ + + DSFEELGL EEVM A+ EMGI PTEIQC+G+P VL SVVLGSHTGSGKTLAY+LPLVQLLRRDEA+LGM KPRRPRAVVLCPTREL+EQV ++ + F Sbjct: 60 RHELLLERLRQRHLKG---VPAATPRPAQREKGRGGGGGGAQELQQKRRVEVV--DSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARF 216 HSP 3 Score: 102.064 bits (253), Expect = 5.851e-21 Identity = 73/171 (42.69%), Postives = 95/171 (55.56%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSG--KEPTIAKSV---------KSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSE-----GKKLKVVGFRGQASS 2317 IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA++KNESLE+LT +NVRR + T KG+ L K N K + + V+ ++S K+ T ++ KST+ K + + + R G + G KL VVGFRG++S Sbjct: 451 IDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEAMKKNESLEALTTNNVRRAAVNPQYTSTKGRPSAL-KVVNQKGR-RGVALQTKSSRIVKDTTSSRRRSPIRSQPRSKSTSSGKAKPVRSAKPSKSSSPSPKVAKSRPRPEGRKGDALNKLGSKLSVVGFRGRSSG 619
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: RH39_ARATH (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana GN=RH39 PE=2 SV=2) HSP 1 Score: 453.366 bits (1165), Expect = 6.444e-146 Identity = 211/249 (84.74%), Postives = 230/249 (92.37%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 V+ VAKSISHHARFRS +VSGG R+R QEDSLNN IDMVVGTPGR+LQHI++GNMVYGDI YLVLDEADTMFDRGFGP+IRKFL PL RALK + QGFQT+LVTATMT AVQKL+DEEFQGIEHLRTSTLHKKIA+ARHDFIKL G E+KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVP EQRVENL KFK ++GDCPTLVCTDLAARGLDLDV+HVVMFDFP NS+ Sbjct: 205 VYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSI 453 HSP 2 Score: 185.267 bits (469), Expect = 6.368e-48 Identity = 127/216 (58.80%), Postives = 148/216 (68.52%), Query Frame = 2 Query: 161 MAATSRTLLFVSLLSSPKHFS----YYPFL---KPSRVFRGFKPFCSA------PSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769 M SRT+L +SL SS FS +PFL KP R F+P SA P+ DPD LKH++LLERLR RHLK SAK P PS V+G E E+ +KK K + ++F+ELGLSEEVMGA++E+ IEVPTEIQCIGIP V+E KSVVLGSHTGSGKTLAY+LP+VQL+R DEA LG TKPRRPR VVLCPTRELSEQV Sbjct: 1 MVGASRTILSLSLSSSLFTFSKIPHVFPFLRLHKP-RFHHAFRPLYSAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPS------SVVGVEEES----SIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQV 205 HSP 3 Score: 135.961 bits (341), Expect = 8.230e-32 Identity = 80/167 (47.90%), Postives = 108/167 (64.67%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVK----LFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXS------LETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSK 2323 IDYLHRTGRTARMGAKGKVTSLV++KD +LA RIEEA+R NESLESLT DNVRRD ART IT++KG++VK + K N ++K + S R++G + + KS S+ S L+T + ++ + ++ GKKL VVGFRG++SS++ Sbjct: 453 IDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQRNSRDKPSSSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGSRSIAARGKTGSDRRPGKKLSVVGFRGKSSSAR 619
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.121e-26 Identity = 71/252 (28.17%), Postives = 129/252 (51.19%), Query Frame = 3 Query: 996 KSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 K +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK +G ++P QT++ +AT K V+ L + Q + ++ ++++ K + +++ +E + K N++++F T + + FL ++ ++ HG+ +R L++FK+ G P +V TD+A+RG+D+ ++ HV+ +D+P NS I I Sbjct: 228 KKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPDR---QTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 469 HSP 2 Score: 31.5722 bits (70), Expect = 1.121e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R GA G +L Sbjct: 464 DYIHRIGRTGRAGAMGTAITL 484 HSP 3 Score: 57.3806 bits (137), Expect = 4.584e-7 Identity = 36/94 (38.30%), Postives = 48/94 (51.06%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP + + +L P +VL PTREL+ Q+ Sbjct: 134 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQP----LLAPGDGPIVLVLAPTRELAVQI 223
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.248e-26 Identity = 74/246 (30.08%), Postives = 123/246 (50.00%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L +++ + TPGR++ I+ G + YLVLDEAD M D GF P IRK LG ++P QT + +AT K V+ L + + +L ++++ K + + + LE + K N++++F T + + FL ++ ++ HG+ +R LN+FK+ G P +V TD+A+RG+D+ ++ HV +D+P NS I I Sbjct: 249 SRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILG-----QIRPDR---QTCMWSATWPKEVRALASDYLNDFIQVNIGSLELSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRI 484 HSP 2 Score: 32.3426 bits (72), Expect = 1.248e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R G KG +L Sbjct: 479 DYIHRIGRTGRAGQKGTAITL 499 HSP 3 Score: 56.9954 bits (136), Expect = 6.540e-7 Identity = 38/99 (38.38%), Postives = 50/99 (50.51%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P +VL PTREL+ Q+ Sbjct: 149 ETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 238
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 1.281e-26 Identity = 77/249 (30.92%), Postives = 126/249 (50.60%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARH---DFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L +++ + TPGR++ I+ G + YLVLDEAD M D GF P IRK LG ++P QT + +AT K V+ L + + +L SA H ++++ K + + + LE + K N++++F T + + FL ++ ++ HG+ +R LN+FK+ G P +V TD+A+RG+D+ ++ HV +D+P NS I I Sbjct: 202 SRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILG-----QIRPDR---QTCMWSATWPKEVRALASDYLNEFIQVNIGSLE---LSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRI 437 HSP 2 Score: 32.3426 bits (72), Expect = 1.281e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R G KG +L Sbjct: 432 DYIHRIGRTGRAGQKGTAITL 452 HSP 3 Score: 56.9954 bits (136), Expect = 6.497e-7 Identity = 38/99 (38.38%), Postives = 50/99 (50.51%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P +VL PTREL+ Q+ Sbjct: 102 ETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 191
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.560e-26 Identity = 71/246 (28.86%), Postives = 127/246 (51.63%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK + ++P QT + +AT K V++L + + ++ ++++ K + +++ LE + +GN+ ++F T + + FL ++ ++ HG+ ++R LN+FK+ G P +V TD+A+RG+D+ D+ HV+ +D+P NS I I Sbjct: 219 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIS-----QIRPD---RQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRI 454 HSP 2 Score: 33.113 bits (74), Expect = 1.560e-26 Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSLVAKKD 1933 DY+HR GRT R GAKG + ++ Sbjct: 449 DYIHRIGRTGRAGAKGTAITFFTTEN 474 HSP 3 Score: 59.3066 bits (142), Expect = 1.321e-7 Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G + V+ V+ G E PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P ++L PTREL+ Q+ Sbjct: 119 ENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLILAPTRELAVQI 208
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DDX3_DROME (ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.913e-26 Identity = 82/254 (32.28%), Postives = 127/254 (50.00%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHL---RTSTLHKKIASARHDFIKLLGSENKLEALLQVLE-----PSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLD-VNHVVMFDFP 1715 +F AK ++ +R R ++ GG Q L+ ++V TPGR+ I G + +I++LVLDEAD M D GF P IR+ + L + P+GQ QT++ +AT K +Q+L + L R + + I I + +K LL +L P K + ++F T + +++ FL + + HG+ ++R E L F+S GDCP LV T +AARGLD+ V HV+ FD P Sbjct: 394 IFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLN---MPPTGQ-RQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQT----ILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRS--GDCPILVATAVAARGLDIPHVKHVINFDLP 637
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.642e-26 Identity = 73/249 (29.32%), Postives = 130/249 (52.21%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARH---DFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK + ++P QT + +AT K V++L + + ++ SA H ++++ K + +++ LE + + N++++F T + + FL ++ ++ HG+ ++R LN+FK+ G P +V TD+A+RG+D+ D+ HV+ +D+P NS I I Sbjct: 225 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIS-----QIRPD---RQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMD---LSANHRITQIVEVVSDFEKRDKMIKHLEKIMEDRSNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKA--GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRI 460 HSP 2 Score: 33.113 bits (74), Expect = 2.642e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R GAKG + Sbjct: 455 DYIHRIGRTGRAGAKGTAITF 475 HSP 3 Score: 59.6918 bits (143), Expect = 7.854e-8 Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G + V+ V+ G E PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P +VL PTREL+ Q+ Sbjct: 125 ETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 214
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DRS1_CANAL (ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DRS1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.105e-26 Identity = 84/269 (31.23%), Postives = 133/269 (49.44%), Query Frame = 3 Query: 918 YSPTLLTSFLFVTRLMLVAF*VFSVAKSISHHAR-FRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDG-NMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFP 1715 Y P+ T + +T +A V+ K +SHH + GG LR QE+ L D+V+ TPGR++ HI + + DI+ LV+DEAD M + GF ++ + L +L P + QT+L +ATM +Q LI Q + + F+++ + ALL L ++ +RV+VF ++ + LG + HG + EQR++N+ FKS + P L+CTDLAARGLD+ + V+ +D P Sbjct: 194 YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEIL------SLIPKHKR-QTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQLKPALLYQLLKGVS--SRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKS--LEVPVLICTDLAARGLDIPKIELVINYDMP 451 HSP 2 Score: 63.5438 bits (153), Expect = 6.287e-9 Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 2 Query: 491 SFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPR-RPRAVVLCPTRELSEQV 769 SF+ L LS V+ + E+ PT IQ IP L K +V G+ TGSGKT AYM+P+++ L L KP + ++L PTREL+ QV Sbjct: 131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERL---------LYKPSTSTKVIILTPTRELALQV 215
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_MAGO7 (ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.730e-26 Identity = 69/248 (27.82%), Postives = 127/248 (51.21%), Query Frame = 3 Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSL---AKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745 +R R+T V GG Q L+ +++ + TPGR++ ++ G + YLVLDEAD M D GF P IRK +G ++P QT++ +AT K V+ + + Q + +L ++++ K + +++ +E + N++++F T + + FL ++ ++ HG+ +R L++FK+ G P +V TD+A+RG+D+ ++ HV+ +D+P NS I I Sbjct: 225 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPD---RQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 462 HSP 2 Score: 33.113 bits (74), Expect = 5.730e-26 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918 DY+HR GRT R GAKG + Sbjct: 457 DYIHRIGRTGRAGAKGTAITF 477 HSP 3 Score: 57.7658 bits (138), Expect = 3.479e-7 Identity = 37/99 (37.37%), Postives = 50/99 (50.51%), Query Frame = 2 Query: 488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769 ++F+E G VM V+ G PT IQ G P L + VV + TGSGKTL Y LP AI+ + +P P ++L PTREL+ Q+ Sbjct: 125 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLILAPTRELAVQI 214
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: F6HJE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02530 PE=4 SV=1) HSP 1 Score: 477.248 bits (1227), Expect = 6.642e-153 Identity = 226/249 (90.76%), Postives = 236/249 (94.78%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLN PIDMVVGTPGRVLQHI++GNMVYG+IKYLVLDEADTMFDRGFGPDIRKFL PLKNRA K QGFQT+LVTATMTKAVQKLIDEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFLGENQI TVNYHGEVP EQRVENL KFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 212 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNIPIDMVVGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKSDDQGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLKKFKTEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 460 HSP 2 Score: 206.453 bits (524), Expect = 3.518e-53 Identity = 119/192 (61.98%), Postives = 135/192 (70.31%), Query Frame = 2 Query: 245 SRVFRGFKPFCSAPSPILTTIDPDD----LKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 +RVF GFKP + S T I+ D ++HS+LLE+LR RHLK SAK P + PP L G+E E KK K M SFEELGLSEEVM AVRE GI VPTEIQCIG+P VLE +SVVLGSHTGSGKTLAYMLPLVQLLRRDEA+ G+L KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 40 TRVFLGFKPISCSSSSSTTAIEADQALQPMRHSILLEKLRFRHLKDSAKSPQTRS--PP--LSTGGKEGEPGSMKSQKKPK--MVSSFEELGLSEEVMAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLLRRDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 225 HSP 3 Score: 137.887 bits (346), Expect = 1.795e-30 Identity = 75/109 (68.81%), Postives = 83/109 (76.15%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKA-------VSASVRTSGKEPTIAKSVK 2158 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLA RIEEAIRKNESLE+LT DN+RRD AR +I+EQK KN L K S KNKTK +AS +TSG++ KS K Sbjct: 460 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKTKVESMKSSSKAASTQTSGRKTLGGKSGK 568
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A059BSP8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02678 PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 7.636e-153 Identity = 224/249 (89.96%), Postives = 239/249 (95.98%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGR+R QEDSLNNPIDMVVGTPGR+LQHI++GN+VYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALK G GFQT+LVTATMT AVQKL+DEEFQGIEHLRTSTLHKKIASARHDFIK+ GSENKLE+LLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP EQRVENL KFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 290 VFRVAKSISHHARFRSTMVSGGGRIRPQEDSLNNPIDMVVGTPGRLLQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKSDGLGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIASARHDFIKISGSENKLESLLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLHENQISTVNYHGEVPAEQRVENLKKFKNEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 538 HSP 2 Score: 181.03 bits (458), Expect = 3.037e-44 Identity = 104/169 (61.54%), Postives = 119/169 (70.41%), Query Frame = 2 Query: 320 LKHSMLLERLRTRHLKHS-----AKLPSSSPSMPPQNLPVLGQETEAYDXX-XXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 +KH+MLLERLR RHLK + ++ P S P + EA + + +KKK M SFEELGLSEEVM AVRE IEVPTEIQC+GIP VLE KSVVLGSHTGSGKTLAY+LPLVQLLRRDE + G L KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 139 MKHTMLLERLRMRHLKDAPNPQQSRTPESEGGSKMARRP----KEEALEVEGEKRKKKAAMVGSFEELGLSEEVMRAVRETAIEVPTEIQCLGIPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEELYGRLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 303 HSP 3 Score: 138.658 bits (348), Expect = 2.310e-30 Identity = 96/187 (51.34%), Postives = 117/187 (62.57%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTK----------AVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNR--SVGG----------------SSEGKKLKVVGFRGQASS-SKR 2326 IDYLHRTGRTARMGAKGKVTSLVAKKD LLA RIEEAIRKNESLE+LTVDNVRRD AR+RI+EQKGKN KL K S+ + K K +AS + G++ K++K+++ AKP++ + A+ + K R SVG S+ KL VVGFRG+ SS SKR Sbjct: 538 IDYLHRTGRTARMGAKGKVTSLVAKKDHLLATRIEEAIRKNESLEALTVDNVRRDIARSRISEQKGKNTKLSKVSDQRYKGKPAATRSSNSHTKAASSQIPGRKTAGTKALKTSSSAKPARVA-------KPARAVKISKVTRPFSVGKSAKSSTKSSSNGRKQTQSKSGKLSVVGFRGRNSSLSKR 717
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: M5VNC9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002766mg PE=4 SV=1) HSP 1 Score: 475.322 bits (1222), Expect = 3.358e-152 Identity = 223/249 (89.56%), Postives = 237/249 (95.18%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF V+K +SHHARFRSTMVSGGGRLR QEDSLNNPI+MVVGTPGRVLQHI+DGN+VYGDIKY+VLDEADTMFDRGFGPDIRKFL PLK+RA KP GQGFQT+LV+ATMTKAVQ LIDEEFQGI HLRTS+LHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTL+SSRAVDHFL ENQISTVNYHGEVP EQRVENL KFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 215 VFRVSKFVSHHARFRSTMVSGGGRLRPQEDSLNNPIEMVVGTPGRVLQHIEDGNLVYGDIKYVVLDEADTMFDRGFGPDIRKFLVPLKHRASKPDGQGFQTVLVSATMTKAVQTLIDEEFQGILHLRTSSLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLSSSRAVDHFLNENQISTVNYHGEVPAEQRVENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 463 HSP 2 Score: 196.052 bits (497), Expect = 1.453e-49 Identity = 116/214 (54.21%), Postives = 145/214 (67.76%), Query Frame = 2 Query: 206 SPKHFSYYPFLKPSRVFRGFKPFCSAPSPILT----TIDPDD-----LKHSMLLERLRTRHLKHSAK-LPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV-----LVTHPAMIWTS 802 + K FS K + V GF+P C+A + ++ I+ ++ LKHS+LLE+LR RHLK SAK S++P+ P Q Q + K + KKK+++ ++F LGL+EEV+ AVREMGIE PTEIQCIGIP VLE K+VVLGSHTGSGKTLAYMLPL QLLRRDEA G+ KPRRPRAVVLCPTRELSEQV V+H A ++ Sbjct: 25 AAKRFSLIKLPKTTGVLTGFRPLCTATTTTISIPESAIEAEEQETQPLKHSLLLEKLRLRHLKSSAKPQTSANPNGPAQR-----QSEDGLGKPENKKKREV--ENFGGLGLTEEVLAAVREMGIEAPTEIQCIGIPAVLEGKTVVLGSHTGSGKTLAYMLPLAQLLRRDEAENGIQMKPRRPRAVVLCPTRELSEQVFRVSKFVSHHARFRST 231 HSP 3 Score: 134.42 bits (337), Expect = 3.065e-29 Identity = 90/176 (51.14%), Postives = 110/176 (62.50%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGG-----------SSEGKKLKVVGFRGQAS-SSKRESFTPS 2344 IDYLHRTGRTARMGAKGKVTSLVAKK+L+LA RIEEAI+KNESLESL+VD+VRRD AR+RI KG L + SN KNK+++ SA + +KSVK + + K S S + + + + +K S G S KL VVGFRG+AS S KRES S Sbjct: 463 IDYLHRTGRTARMGAKGKVTSLVAKKNLMLANRIEEAIKKNESLESLSVDSVRRDIARSRIAPLKG---NLVRVSNQKNKSRSASAPAKFGKASFQASKSVKPSNASTSRKASSSASSSRKGSSSPSNSRKAPSSGKRQPESRRSSVVKSTASKLSVVGFRGRASWSDKRESVASS 635
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: I1JDA7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 1.556e-151 Identity = 226/249 (90.76%), Postives = 234/249 (93.98%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFR TMVSGGGRLR QEDSLNNPID+VVGTPGRVLQHI++GNMVYGDIKYLVLDEADTMFDRGFGPDIRKF+GPLKNRA KP G GFQTILVTATMTKAVQ LIDEEF GI HLRTSTLHKKI+SARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTL+SSRAVDHFLGENQIS VNYHGEVP EQRVENL KFKSD DCPTLVCTDLAARGLDLDV+HVVMFDFPLNS+ Sbjct: 222 VFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDVVVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFIGPLKNRASKPDGLGFQTILVTATMTKAVQNLIDEEFLGIVHLRTSTLHKKISSARHDFIKLAGSENKLEALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHFLGENQISAVNYHGEVPAEQRVENLRKFKSDGDDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSI 470 HSP 2 Score: 195.282 bits (495), Expect = 2.190e-49 Identity = 115/193 (59.59%), Postives = 133/193 (68.91%), Query Frame = 2 Query: 230 PFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 P KP +FR F+P CS + D KHS+LLERLR+RHL+ +AK ++P P+ + A K+KK SFEELGLSEEVMGAVREMGIEVPTEIQ IGIP VLEEKSVVLGSHTGSGKTLAY+LPL QLLRRDE + G+L KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 51 PLPKPLPLFRRFRPLCSVSAAAPEAAD---AKHSILLERLRSRHLRDAAK---AAPE--PRKKEKVAAAAAAAAAAAEAKEKKKAVASFEELGLSEEVMGAVREMGIEVPTEIQSIGIPAVLEEKSVVLGSHTGSGKTLAYLLPLAQLLRRDEQLNGILLKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 235 HSP 3 Score: 119.398 bits (298), Expect = 2.120e-24 Identity = 77/163 (47.24%), Postives = 97/163 (59.51%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRI-TEQKGKNVKLFKTSNLKNKTKAVSASVRT-SGKEPTIAKSVKSTXX--XXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRE 2329 IDYLHRTGRTARMGAKGKVTSLVAKKDL LA +IE+A+RKNESLE++T ++VRRD ART+ + +KGK+ +L K S + K+ + S SG + VKS + SL A T + S KL VVGFRG+ SSS + Sbjct: 470 IDYLHRTGRTARMGAKGKVTSLVAKKDLDLASKIEDALRKNESLEAITKESVRRDIARTQNQSTEKGKSKRLVKVSKVMGKSGSRFGSGNNGSGMKSGKGSPVKSMKKGIQVSKSGKSSSANSLRKASTEKRQSSKMVSATKSTNSKLNVVGFRGKNSSSNNK 632
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A068TXU1_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_6 OS=Coffea canephora GN=GSCOC_T00034653001 PE=4 SV=1) HSP 1 Score: 468.774 bits (1205), Expect = 2.352e-151 Identity = 220/249 (88.35%), Postives = 235/249 (94.38%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 V+ VAKSISHHARFRSTMVSGGGRLR QEDSLN PID++VGTPGRVLQHI++GNMVYGDI+YLVLDEADTMFDRGFGPDIRKFLGPLKNRA K G GFQT+LV+ATMTKAVQKL+DEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSL+KGNRVMVFCNTLNSSRAVDHFL EN ISTVNYHGEVP E+RVENL KFKS+DGDCPTLVCTDLAARGLDLDV+HV+MFDFPL S+ Sbjct: 82 VYRVAKSISHHARFRSTMVSGGGRLRPQEDSLNTPIDLIVGTPGRVLQHIEEGNMVYGDIRYLVLDEADTMFDRGFGPDIRKFLGPLKNRASKHDGLGFQTVLVSATMTKAVQKLVDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHFLHENGISTVNYHGEVPAEERVENLEKFKSEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLTSI 330 HSP 2 Score: 142.895 bits (359), Expect = 2.049e-32 Identity = 68/82 (82.93%), Postives = 73/82 (89.02%), Query Frame = 2 Query: 524 MGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769 MGA+ E+ I VPTEIQCIGIP VL KSVVLGSHTGSGKTLAYMLPLVQLLRRDEA+ G+L +PRRPRAVVLCPTREL EQV Sbjct: 1 MGALEELSISVPTEIQCIGIPAVLAGKSVVLGSHTGSGKTLAYMLPLVQLLRRDEALNGILMRPRRPRAVVLCPTRELCEQV 82 HSP 3 Score: 131.339 bits (329), Expect = 8.616e-29 Identity = 86/175 (49.14%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPT------------------IAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGG-----SSEGKKLKVVGFRGQ 2308 IDYLHRTGRTARMGAKGKVTSLVAKKD +LA RIEEAI KNESLESL+V +V+RD AR RI EQKGK+VKL K S K+K A +AS ++SG + ++ +++ +K KVSK+ A +S + ++ G SS KL VVGFRG+ Sbjct: 330 IDYLHRTGRTARMGAKGKVTSLVAKKDQILATRIEEAILKNESLESLSVGSVQRDIARARINEQKGKSVKLLKAS--KHKKTATAASAKSSGADSKAKPKKGLSKNGAGGKVDLTKRTFRTSPGSKSVTATAKVSKNFSGANSSKAKVSHKEFQGRKPDVSSSRSKLNVVGFRGR 502
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: W9R456_9ROSA (DEAD-box ATP-dependent RNA helicase 39 OS=Morus notabilis GN=L484_002724 PE=4 SV=1) HSP 1 Score: 472.626 bits (1215), Expect = 3.810e-151 Identity = 221/249 (88.76%), Postives = 233/249 (93.57%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QEDSLN IDMVVGTPGR+LQHI DGN+VYGDIKY+VLDEADTMFD GFGPDIRKFLGPLKNRA KP GQGFQT+LV ATMTKAVQ LIDEEFQGI HLRTSTLHKK+ASARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQ STVNYHGEVP EQRVENL KFK++DGDCPTLVC+DLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 221 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNGAIDMVVGTPGRILQHIQDGNIVYGDIKYVVLDEADTMFDHGFGPDIRKFLGPLKNRASKPDGQGFQTVLVAATMTKAVQNLIDEEFQGIVHLRTSTLHKKVASARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLSENQTSTVNYHGEVPAEQRVENLKKFKTEDGDCPTLVCSDLAARGLDLDVDHVIMFDFPLNSI 469 HSP 2 Score: 185.652 bits (470), Expect = 4.998e-46 Identity = 133/237 (56.12%), Postives = 158/237 (66.67%), Query Frame = 2 Query: 146 MQKAMMAATSRTLLFVSLLS---------SPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTT-------IDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 MQ AM AT++TLL +SL S + K FS KP+R++ GF+P ++ + T I P LKHS+LLERLR RHLK SAK + S + +G E KKK+K++ SFEELGLS+EVMGAVREMGIEVPTEIQ IGIP VLE KSVVLGSHTGSGKTLAYMLPLVQL+R+DEA+ GML KPRRPRAVVLCPTRELSEQV ++ + F Sbjct: 1 MQLAMGGATAKTLLTISLSSHLSSLSRFSAAKRFSLLRPPKPTRIYPGFRPLRTSATTTETETVDTDDTIQP--LKHSILLERLRLRHLKDSAKPQETKTSTKKNSDENVGLEKLKESGYGDKKKQKVVG-SFEELGLSDEVMGAVREMGIEVPTEIQSIGIPAVLEGKSVVLGSHTGSGKTLAYMLPLVQLMRQDEAMFGMLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 234 HSP 3 Score: 129.413 bits (324), Expect = 1.017e-27 Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVS 2107 IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA+RKNESLESL+V++VRRD AR RITEQKGKN KL K + +++ A S Sbjct: 469 IDYLHRTGRTARMGAKGKVTSLVAKKDVALATRIEEAMRKNESLESLSVNSVRRDIARARITEQKGKNEKLIKVAKQRSRDSAKS 553
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: M0U4C7_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 465.692 bits (1197), Expect = 1.752e-150 Identity = 216/249 (86.75%), Postives = 233/249 (93.57%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTM+SGGGRLR QEDSL+ PIDMVVGTPGR+LQHI+DGNMVYGDIK+LVLDEADTMFD+GFGPDIRKFLGPLKNRA KP GFQT+LVTATMTKAVQ L+DEEFQGI HLRTS+ KK+ASARHDFIKL G+ENKLEALLQVLEPSL+KGNRVMVFCNTLNSSRAVDHFL ENQI TVNYHGEVP E+RVENL KFKS+DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+ Sbjct: 76 VFRVAKSISHHARFRSTMISGGGRLRPQEDSLSEPIDMVVGTPGRILQHINDGNMVYGDIKFLVLDEADTMFDQGFGPDIRKFLGPLKNRAAKPGDHGFQTVLVTATMTKAVQNLVDEEFQGIIHLRTSSFQKKVASARHDFIKLSGAENKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHFLTENQIFTVNYHGEVPAEERVENLRKFKSEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 324 HSP 2 Score: 130.954 bits (328), Expect = 1.085e-28 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 542 MGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 M I VPTEIQCI +P VLE KSVVLGSHTGSGKTLAYMLP+VQL+R+DEA+ G+L +PRRPRAVVLCPTREL EQV ++ + F Sbjct: 1 MEISVPTEIQCIAVPAVLEGKSVVLGSHTGSGKTLAYMLPIVQLMRQDEALSGVLMRPRRPRAVVLCPTRELCEQVFRVAKSISHHARF 89 HSP 3 Score: 114.39 bits (285), Expect = 2.146e-23 Identity = 74/165 (44.85%), Postives = 102/165 (61.82%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKS-TXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344 IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA++KNESLE+L+ ++VRRD ++ +QK K + S+ K KA SA + + + S KS T A V E + + +++ +SV KL VVGFRG++S+ +++S P+ Sbjct: 324 IDYLHRTGRTARMGAKGKVTSLVAKKDIPLATRIEEAMKKNESLEALSANSVRRDAFISKQIDQKYKAKVILTKSSSKAGKKATSAQKSVAASKGKASASTKSKTTVAISKPIKSPVGGKREPTRGNKLQQGRKSVITRIPKSKLSVVGFRGRSSAGRKQSPKPT 488
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: K4DG05_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc12g056740.1 PE=4 SV=1) HSP 1 Score: 468.774 bits (1205), Expect = 1.069e-149 Identity = 219/249 (87.95%), Postives = 234/249 (93.98%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTMVSGGGRLR QED L +PIDM+VGTPGRVLQHI++GNMVYGDI+YLVLDEADTMFDRGFGPDIRKFL PLKNRA K +GFQT+LVTATMTKAVQKL+DEEFQGIEHLRTS+LHKKIASARHDFIKL GSENK+EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL E QISTVNYHGEVP EQRVENL KFKS++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+ Sbjct: 204 VFRVAKSISHHARFRSTMVSGGGRLRPQEDCLASPIDMIVGTPGRVLQHIEEGNMVYGDIRYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKTDDEGFQTVLVTATMTKAVQKLVDEEFQGIEHLRTSSLHKKIASARHDFIKLSGSENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLNETQISTVNYHGEVPAEQRVENLAKFKSNEGDCPTLVCTDLAARGLDLDVDHVIMFDFPKNSI 452 HSP 2 Score: 170.629 bits (431), Expect = 4.426e-41 Identity = 127/226 (56.19%), Postives = 149/226 (65.93%), Query Frame = 2 Query: 161 MAATSRTLLFVSLLSSPKHF--SYYPFL-KPSRVFRGFKPFCS----APSPILTTIDPDDL---KHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 M T R LL +SLL P F + P L +P RV+ GF+P S APS + D L KHS+LLERLR RHL+ S K P+S ++ ++ E D G K KKK +A SFEELGL+EEVMGA+ EMGI PTEIQ IGIP V+E KSVVLGSHTGSGKTLAYMLP+VQLLRRDE + GML KPRRPRAVVLCPTREL EQV ++ + F Sbjct: 1 MGVTGRALLNLSLL--PFRFPLTRNPLLPQPRRVYLGFRPLSSTTTTAPSYAAVAEEEDALQPVKHSILLERLRLRHLRESPK-PNSEIKQ------LVRKQVEVDDGGVKKSKKKAVASSFEELGLTEEVMGALGEMGISEPTEIQSIGIPAVIEGKSVVLGSHTGSGKTLAYMLPIVQLLRRDEELDGMLMKPRRPRAVVLCPTRELCEQVFRVAKSISHHARF 217 HSP 3 Score: 125.946 bits (315), Expect = 1.526e-26 Identity = 85/172 (49.42%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAV---SASV-------RTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTS-AVRKKNRSVGGSSEG---------KKLKVVGFRGQ 2308 IDYLHRTGRTARMGAKGKVTSL+AKKDLLLA IEEAI+KNESLESL+VD ++RD AR+RITEQK K K K SN + K A S+SV + S K +S K+T + + K + V KK S G KKL VVGFRG+ Sbjct: 452 IDYLHRTGRTARMGAKGKVTSLIAKKDLLLANCIEEAIKKNESLESLSVDGIKRDNARSRITEQKDKREKSVKVSNSRGKATASTGKSSSVTRKTIDSKRSAKTTDSKRSPKTTDSKRSPGTKFGKVPAKSKPKIAMKVSKKTSSSTGKRRVDSRSSSVSTKKLNVVGFRGR 623
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: M1C4K2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023195 PE=4 SV=1) HSP 1 Score: 467.233 bits (1201), Expect = 4.442e-149 Identity = 219/249 (87.95%), Postives = 233/249 (93.57%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 VF VAKSISHHARFRSTM+SGGGRLR QED L +PIDM+VGTPGRVLQHI++GNMVYGDIKYLVLDEADTMFDRGFGPDIRKFL PL NRA K QGFQT+LVTATMTKAVQKL+DEEFQGIEHLRTS+LHKKIASARHDFIKL GSENK+EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL E QISTVNYHGEVP EQRVENL KFKS++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+ Sbjct: 206 VFRVAKSISHHARFRSTMISGGGRLRPQEDCLASPIDMIVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLNNRASKTGDQGFQTVLVTATMTKAVQKLVDEEFQGIEHLRTSSLHKKIASARHDFIKLSGSENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLNETQISTVNYHGEVPAEQRVENLAKFKSNEGDCPTLVCTDLAARGLDLDVDHVIMFDFPKNSI 454 HSP 2 Score: 167.933 bits (424), Expect = 3.806e-40 Identity = 125/228 (54.82%), Postives = 146/228 (64.04%), Query Frame = 2 Query: 161 MAATSRTLLFVSLLSSPKHFSYYPFL-KPSRVFRGFKPFCS----APS-------PILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808 M T R LL +SLL + P L P RV+ GF+P S APS + P +KHS+LLERLR RHLK S K P+S ++ ++ E D G K KKK +A SFEELGL+EEVMGA+ EMGI PTEIQ IGIP V+E KSVVLGSHTGSGKTLAYMLP+VQLLRRDE + GML KPRRPRAVVLCPTREL EQV ++ + F Sbjct: 1 MGVTGRALLNLSLLPFRFPLTRNPLLPHPRRVYLGFRPLSSTITTAPSYAAAAAAEEEDALQP--VKHSILLERLRLRHLKESPK-PNSEIKQ------LVRKQAEVDDGGVKKSKKKAVASSFEELGLTEEVMGALGEMGISEPTEIQSIGIPAVIEGKSVVLGSHTGSGKTLAYMLPMVQLLRRDEELDGMLMKPRRPRAVVLCPTRELCEQVFRVAKSISHHARF 219 HSP 3 Score: 123.635 bits (309), Expect = 7.338e-26 Identity = 61/80 (76.25%), Postives = 68/80 (85.00%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNK 2092 IDYLHRTGRTARMGAKGKVTSL+AKKDLLLA IEEAI+KNESLESL+VD ++RD AR+RITEQK K K K SN + K Sbjct: 454 IDYLHRTGRTARMGAKGKVTSLIAKKDLLLANCIEEAIKKNESLESLSVDGIKRDNARSRITEQKDKREKSVKVSNSRGK 533
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: K3XFN8_SETIT (Uncharacterized protein OS=Setaria italica GN=Si000707m.g PE=4 SV=1) HSP 1 Score: 462.996 bits (1190), Expect = 1.172e-147 Identity = 213/249 (85.54%), Postives = 232/249 (93.17%), Query Frame = 3 Query: 981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727 V+ VAKSISHHARFRSTMVSGG RLR QEDSLN P+DMVVGTPGR+L HI DGNMVYGDIKYLVLDEADTMFD+GFGPDIRKFL PLKNRA KP QGFQT+LVTATMTKAVQKLIDEEF+GI HLRTST K++A+ARHDFIKL GSENKLEALLQVLEPSLAKGN++MVFCNTLNSSRAVDHFL ENQISTVNYHGEVP E+RVENLNKF++++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+ Sbjct: 192 VYRVAKSISHHARFRSTMVSGGTRLRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRATKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTSTFQKRVATARHDFIKLTGSENKLEALLQVLEPSLAKGNKIMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSI 440 HSP 2 Score: 165.622 bits (418), Expect = 1.741e-39 Identity = 84/127 (66.14%), Postives = 100/127 (78.74%), Query Frame = 2 Query: 389 SSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769 SP++PP+ G E + +G++ + A+SFEELGL EEVM A+ EMGI PTEIQC+G+P VL+ SVVLGSHTGSGKTLAY+LPLVQLLRRDEA+LGM KPRRPRAVVLCPTREL+EQV Sbjct: 68 GSPNLPPRGKAARGGERTSQHPQQGRRVEA--AESFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLDGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQV 192 HSP 3 Score: 103.219 bits (256), Expect = 2.137e-19 Identity = 77/178 (43.26%), Postives = 103/178 (57.87%), Query Frame = 2 Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTS------NLKNKTKAV--SASVRTSGKE--------PTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGG--SSEGKKLKVVGFRGQASSSKRES 2332 IDYLHRTGRTARMGAKGKVTSLVAKK++ LA +IEEA++KNESLE+LT +NVRR A + KG+ + KTS N K + V S S RT P I K +A + +K + + S++ +K+ A ++ G + G KL VVGFRG++S +S Sbjct: 440 IDYLHRTGRTARMGAKGKVTSLVAKKNVALATKIEEAMKKNESLEALTTNNVRR-AANPQSASTKGRTSRSAKTSSALKVVNQKGRRGVVLSSKSSRTPKDTTSTRRRLPPKIQPKAKKSAAPQKAKLVKPANNSVKVSKSKAKPAGRKAKGDILNKLGTKLSVVGFRGRSSGKSAQS 616 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098040 ID=g.barbadense_cottongen_reftransV1_0098040; Name=g.barbadense_cottongen_reftransV1_0098040; organism=Gossypium barbadense; type=contig; length=2758bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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