g.barbadense_cottongen_reftransV1_0098040, g.barbadense_cottongen_reftransV1_0098040 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0098040
Unique Nameg.barbadense_cottongen_reftransV1_0098040
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2758
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Dt06chromosomeg.barbadense_cottongen_reftransV1_0098040:1..2758 .
Dt06:30849309..30856275 -
n/a
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: RH39_ORYSJ (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 461.455 bits (1186), Expect = 6.234e-149
Identity = 213/249 (85.54%), Postives = 232/249 (93.17%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGG R+R QEDSLN P+DMVVGTPGR+L HI DGNMVYGDIKYLVLDEADTMFD+GFGPDIRKFL PLKNRA KP  QGFQT+LVTATMTKAVQKLIDEEF+GI HLRT+T  K++A+ARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP E+RVENLNKF++++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+
Sbjct:  203 VFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSI 451          

HSP 2 Score: 174.096 bits (440), Expect = 3.384e-44
Identity = 93/162 (57.41%), Postives = 115/162 (70.99%), Query Frame = 2
Query:  323 KHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            +H +LLERLR RHLK    +P+++P    +     G    A +  + ++ + +  DSFEELGL EEVM A+ EMGI  PTEIQC+G+P VL   SVVLGSHTGSGKTLAY+LPLVQLLRRDEA+LGM  KPRRPRAVVLCPTREL+EQV     ++   + F
Sbjct:   60 RHELLLERLRQRHLKG---VPAATPRPAQREKGRGGGGGGAQELQQKRRVEVV--DSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARF 216          

HSP 3 Score: 102.064 bits (253), Expect = 5.851e-21
Identity = 73/171 (42.69%), Postives = 95/171 (55.56%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSG--KEPTIAKSV---------KSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSE-----GKKLKVVGFRGQASS 2317
            IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA++KNESLE+LT +NVRR     + T  KG+   L K  N K + + V+   ++S   K+ T ++           KST+  K             +      + + R  G   +     G KL VVGFRG++S 
Sbjct:  451 IDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEAMKKNESLEALTTNNVRRAAVNPQYTSTKGRPSAL-KVVNQKGR-RGVALQTKSSRIVKDTTSSRRRSPIRSQPRSKSTSSGKAKPVRSAKPSKSSSPSPKVAKSRPRPEGRKGDALNKLGSKLSVVGFRGRSSG 619          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: RH39_ARATH (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana GN=RH39 PE=2 SV=2)

HSP 1 Score: 453.366 bits (1165), Expect = 6.444e-146
Identity = 211/249 (84.74%), Postives = 230/249 (92.37%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            V+ VAKSISHHARFRS +VSGG R+R QEDSLNN IDMVVGTPGR+LQHI++GNMVYGDI YLVLDEADTMFDRGFGP+IRKFL PL  RALK + QGFQT+LVTATMT AVQKL+DEEFQGIEHLRTSTLHKKIA+ARHDFIKL G E+KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVP EQRVENL KFK ++GDCPTLVCTDLAARGLDLDV+HVVMFDFP NS+
Sbjct:  205 VYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSI 453          

HSP 2 Score: 185.267 bits (469), Expect = 6.368e-48
Identity = 127/216 (58.80%), Postives = 148/216 (68.52%), Query Frame = 2
Query:  161 MAATSRTLLFVSLLSSPKHFS----YYPFL---KPSRVFRGFKPFCSA------PSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769
            M   SRT+L +SL SS   FS     +PFL   KP R    F+P  SA      P+      DPD LKH++LLERLR RHLK SAK P   PS       V+G E E+      +KK K + ++F+ELGLSEEVMGA++E+ IEVPTEIQCIGIP V+E KSVVLGSHTGSGKTLAY+LP+VQL+R DEA LG  TKPRRPR VVLCPTRELSEQV
Sbjct:    1 MVGASRTILSLSLSSSLFTFSKIPHVFPFLRLHKP-RFHHAFRPLYSAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPS------SVVGVEEES----SIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQV 205          

HSP 3 Score: 135.961 bits (341), Expect = 8.230e-32
Identity = 80/167 (47.90%), Postives = 108/167 (64.67%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVK----LFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXS------LETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSK 2323
            IDYLHRTGRTARMGAKGKVTSLV++KD +LA RIEEA+R NESLESLT DNVRRD ART IT++KG++VK    + K  N ++K  + S   R++G +  + KS  S+              S      L+T  + ++  + ++      GKKL VVGFRG++SS++
Sbjct:  453 IDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQRNSRDKPSSSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGSRSIAARGKTGSDRRPGKKLSVVGFRGKSSSAR 619          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.121e-26
Identity = 71/252 (28.17%), Postives = 129/252 (51.19%), Query Frame = 3
Query:  996 KSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            K     +R R+T V GG     Q   L+  +++ + TPGR++  ++ G      + YLVLDEAD M D GF P IRK +G      ++P     QT++ +AT  K V+ L  +  Q    +   ++           ++++    K + +++ +E  +  K N++++F  T   +  +  FL ++    ++ HG+    +R   L++FK+  G  P +V TD+A+RG+D+ ++ HV+ +D+P NS   I  I
Sbjct:  228 KKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPDR---QTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 469          

HSP 2 Score: 31.5722 bits (70), Expect = 1.121e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R GA G   +L
Sbjct:  464 DYIHRIGRTGRAGAMGTAITL 484          

HSP 3 Score: 57.3806 bits (137), Expect = 4.584e-7
Identity = 36/94 (38.30%), Postives = 48/94 (51.06%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769
            ++F+E G    VM  V+  G   PT IQ  G P  L  + VV  + TGSGKTL Y LP +  +        +L     P  +VL PTREL+ Q+
Sbjct:  134 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQP----LLAPGDGPIVLVLAPTRELAVQI 223          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.248e-26
Identity = 74/246 (30.08%), Postives = 123/246 (50.00%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L   +++ + TPGR++  I+ G      + YLVLDEAD M D GF P IRK LG      ++P     QT + +AT  K V+ L  +       +   +L           ++++    K + + + LE  +  K N++++F  T   +  +  FL ++    ++ HG+    +R   LN+FK+  G  P +V TD+A+RG+D+ ++ HV  +D+P NS   I  I
Sbjct:  249 SRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILG-----QIRPDR---QTCMWSATWPKEVRALASDYLNDFIQVNIGSLELSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRI 484          

HSP 2 Score: 32.3426 bits (72), Expect = 1.248e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R G KG   +L
Sbjct:  479 DYIHRIGRTGRAGQKGTAITL 499          

HSP 3 Score: 56.9954 bits (136), Expect = 6.540e-7
Identity = 38/99 (38.38%), Postives = 50/99 (50.51%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G    VM  V+  G   PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  +VL PTREL+ Q+
Sbjct:  149 ETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 238          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.281e-26
Identity = 77/249 (30.92%), Postives = 126/249 (50.60%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARH---DFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L   +++ + TPGR++  I+ G      + YLVLDEAD M D GF P IRK LG      ++P     QT + +AT  K V+ L  +       +   +L     SA H     ++++    K + + + LE  +  K N++++F  T   +  +  FL ++    ++ HG+    +R   LN+FK+  G  P +V TD+A+RG+D+ ++ HV  +D+P NS   I  I
Sbjct:  202 SRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILG-----QIRPDR---QTCMWSATWPKEVRALASDYLNEFIQVNIGSLE---LSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKT--GKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRI 437          

HSP 2 Score: 32.3426 bits (72), Expect = 1.281e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R G KG   +L
Sbjct:  432 DYIHRIGRTGRAGQKGTAITL 452          

HSP 3 Score: 56.9954 bits (136), Expect = 6.497e-7
Identity = 38/99 (38.38%), Postives = 50/99 (50.51%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G    VM  V+  G   PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  +VL PTREL+ Q+
Sbjct:  102 ETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 191          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.560e-26
Identity = 71/246 (28.86%), Postives = 127/246 (51.63%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L+  +++ + TPGR++  ++ G      + YLVLDEAD M D GF P IRK +       ++P     QT + +AT  K V++L  +       +   ++           ++++    K + +++ LE  +  +GN+ ++F  T   +  +  FL ++    ++ HG+   ++R   LN+FK+  G  P +V TD+A+RG+D+ D+ HV+ +D+P NS   I  I
Sbjct:  219 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIS-----QIRPD---RQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT--GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRI 454          

HSP 2 Score: 33.113 bits (74), Expect = 1.560e-26
Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSLVAKKD 1933
            DY+HR GRT R GAKG   +    ++
Sbjct:  449 DYIHRIGRTGRAGAKGTAITFFTTEN 474          

HSP 3 Score: 59.3066 bits (142), Expect = 1.321e-7
Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G  + V+  V+  G E PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  ++L PTREL+ Q+
Sbjct:  119 ENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLILAPTRELAVQI 208          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DDX3_DROME (ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.913e-26
Identity = 82/254 (32.28%), Postives = 127/254 (50.00%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHL---RTSTLHKKIASARHDFIKLLGSENKLEALLQVLE-----PSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLD-VNHVVMFDFP 1715
            +F  AK  ++ +R R  ++ GG     Q   L+    ++V TPGR+   I  G +   +I++LVLDEAD M D GF P IR+ +  L    + P+GQ  QT++ +AT  K +Q+L  +       L   R  +  + I       I  +   +K   LL +L      P   K +  ++F  T   + +++ FL +      + HG+   ++R E L  F+S  GDCP LV T +AARGLD+  V HV+ FD P
Sbjct:  394 IFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLN---MPPTGQ-RQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQT----ILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRS--GDCPILVATAVAARGLDIPHVKHVINFDLP 637          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dbp2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.642e-26
Identity = 73/249 (29.32%), Postives = 130/249 (52.21%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARH---DFIKLLGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L+  +++ + TPGR++  ++ G      + YLVLDEAD M D GF P IRK +       ++P     QT + +AT  K V++L  +       +   ++     SA H     ++++    K + +++ LE  +  + N++++F  T   +  +  FL ++    ++ HG+   ++R   LN+FK+  G  P +V TD+A+RG+D+ D+ HV+ +D+P NS   I  I
Sbjct:  225 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIS-----QIRPD---RQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMD---LSANHRITQIVEVVSDFEKRDKMIKHLEKIMEDRSNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKA--GKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRI 460          

HSP 2 Score: 33.113 bits (74), Expect = 2.642e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R GAKG   + 
Sbjct:  455 DYIHRIGRTGRAGAKGTAITF 475          

HSP 3 Score: 59.6918 bits (143), Expect = 7.854e-8
Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G  + V+  V+  G E PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  +VL PTREL+ Q+
Sbjct:  125 ETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLVLAPTRELAVQI 214          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DRS1_CANAL (ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DRS1 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.105e-26
Identity = 84/269 (31.23%), Postives = 133/269 (49.44%), Query Frame = 3
Query:  918 YSPTLLTSFLFVTRLMLVAF*VFSVAKSISHHAR-FRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDG-NMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFP 1715
            Y P+  T  + +T    +A  V+   K +SHH       +  GG  LR QE+ L    D+V+ TPGR++ HI +  +    DI+ LV+DEAD M + GF  ++ + L      +L P  +  QT+L +ATM   +Q LI    Q    +         +     F+++   +    ALL  L   ++  +RV+VF     ++  +   LG   +     HG +  EQR++N+  FKS   + P L+CTDLAARGLD+  +  V+ +D P
Sbjct:  194 YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEIL------SLIPKHKR-QTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQLKPALLYQLLKGVS--SRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKS--LEVPVLICTDLAARGLDIPKIELVINYDMP 451          

HSP 2 Score: 63.5438 bits (153), Expect = 6.287e-9
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 2
Query:  491 SFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPR-RPRAVVLCPTRELSEQV 769
            SF+ L LS  V+  + E+    PT IQ   IP  L  K +V G+ TGSGKT AYM+P+++ L         L KP    + ++L PTREL+ QV
Sbjct:  131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERL---------LYKPSTSTKVIILTPTRELALQV 215          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Match: DBP2_MAGO7 (ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.730e-26
Identity = 69/248 (27.82%), Postives = 127/248 (51.21%), Query Frame = 3
Query: 1014 ARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSL---AKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL-DVNHVVMFDFPLNSVSNISLI 1745
            +R R+T V GG     Q   L+  +++ + TPGR++  ++ G      + YLVLDEAD M D GF P IRK +G      ++P     QT++ +AT  K V+ +  +  Q    +   +L           ++++    K + +++ +E  +      N++++F  T   +  +  FL ++    ++ HG+    +R   L++FK+  G  P +V TD+A+RG+D+ ++ HV+ +D+P NS   I  I
Sbjct:  225 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG-----QIRPD---RQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 462          

HSP 2 Score: 33.113 bits (74), Expect = 5.730e-26
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2
Query: 1856 DYLHRTGRTARMGAKGKVTSL 1918
            DY+HR GRT R GAKG   + 
Sbjct:  457 DYIHRIGRTGRAGAKGTAITF 477          

HSP 3 Score: 57.7658 bits (138), Expect = 3.479e-7
Identity = 37/99 (37.37%), Postives = 50/99 (50.51%), Query Frame = 2
Query:  488 DSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKP-----RRPRAVVLCPTRELSEQV 769
            ++F+E G    VM  V+  G   PT IQ  G P  L  + VV  + TGSGKTL Y LP         AI+ +  +P       P  ++L PTREL+ Q+
Sbjct:  125 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---------AIVHINAQPLLAPGDGPIVLILAPTRELAVQI 214          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: F6HJE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02530 PE=4 SV=1)

HSP 1 Score: 477.248 bits (1227), Expect = 6.642e-153
Identity = 226/249 (90.76%), Postives = 236/249 (94.78%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGRLR QEDSLN PIDMVVGTPGRVLQHI++GNMVYG+IKYLVLDEADTMFDRGFGPDIRKFL PLKNRA K   QGFQT+LVTATMTKAVQKLIDEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFLGENQI TVNYHGEVP EQRVENL KFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+
Sbjct:  212 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNIPIDMVVGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKSDDQGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLKKFKTEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 460          

HSP 2 Score: 206.453 bits (524), Expect = 3.518e-53
Identity = 119/192 (61.98%), Postives = 135/192 (70.31%), Query Frame = 2
Query:  245 SRVFRGFKPFCSAPSPILTTIDPDD----LKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            +RVF GFKP   + S   T I+ D     ++HS+LLE+LR RHLK SAK P +    PP  L   G+E E       KK K  M  SFEELGLSEEVM AVRE GI VPTEIQCIG+P VLE +SVVLGSHTGSGKTLAYMLPLVQLLRRDEA+ G+L KPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:   40 TRVFLGFKPISCSSSSSTTAIEADQALQPMRHSILLEKLRFRHLKDSAKSPQTRS--PP--LSTGGKEGEPGSMKSQKKPK--MVSSFEELGLSEEVMAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLLRRDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 225          

HSP 3 Score: 137.887 bits (346), Expect = 1.795e-30
Identity = 75/109 (68.81%), Postives = 83/109 (76.15%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKA-------VSASVRTSGKEPTIAKSVK 2158
            IDYLHRTGRTARMGAKGKVTSLVAKKDLLLA RIEEAIRKNESLE+LT DN+RRD AR +I+EQK KN  L K S  KNKTK         +AS +TSG++    KS K
Sbjct:  460 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKTKVESMKSSSKAASTQTSGRKTLGGKSGK 568          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A059BSP8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02678 PE=4 SV=1)

HSP 1 Score: 479.945 bits (1234), Expect = 7.636e-153
Identity = 224/249 (89.96%), Postives = 239/249 (95.98%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGR+R QEDSLNNPIDMVVGTPGR+LQHI++GN+VYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALK  G GFQT+LVTATMT AVQKL+DEEFQGIEHLRTSTLHKKIASARHDFIK+ GSENKLE+LLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVP EQRVENL KFK++DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+
Sbjct:  290 VFRVAKSISHHARFRSTMVSGGGRIRPQEDSLNNPIDMVVGTPGRLLQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKSDGLGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIASARHDFIKISGSENKLESLLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLHENQISTVNYHGEVPAEQRVENLKKFKNEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 538          

HSP 2 Score: 181.03 bits (458), Expect = 3.037e-44
Identity = 104/169 (61.54%), Postives = 119/169 (70.41%), Query Frame = 2
Query:  320 LKHSMLLERLRTRHLKHS-----AKLPSSSPSMPPQNLPVLGQETEAYDXX-XXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            +KH+MLLERLR RHLK +     ++ P S         P    + EA +   + +KKK  M  SFEELGLSEEVM AVRE  IEVPTEIQC+GIP VLE KSVVLGSHTGSGKTLAY+LPLVQLLRRDE + G L KPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:  139 MKHTMLLERLRMRHLKDAPNPQQSRTPESEGGSKMARRP----KEEALEVEGEKRKKKAAMVGSFEELGLSEEVMRAVRETAIEVPTEIQCLGIPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEELYGRLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 303          

HSP 3 Score: 138.658 bits (348), Expect = 2.310e-30
Identity = 96/187 (51.34%), Postives = 117/187 (62.57%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTK----------AVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNR--SVGG----------------SSEGKKLKVVGFRGQASS-SKR 2326
            IDYLHRTGRTARMGAKGKVTSLVAKKD LLA RIEEAIRKNESLE+LTVDNVRRD AR+RI+EQKGKN KL K S+ + K K            +AS +  G++    K++K+++ AKP++         + A+   + K  R  SVG                  S+  KL VVGFRG+ SS SKR
Sbjct:  538 IDYLHRTGRTARMGAKGKVTSLVAKKDHLLATRIEEAIRKNESLEALTVDNVRRDIARSRISEQKGKNTKLSKVSDQRYKGKPAATRSSNSHTKAASSQIPGRKTAGTKALKTSSSAKPARVA-------KPARAVKISKVTRPFSVGKSAKSSTKSSSNGRKQTQSKSGKLSVVGFRGRNSSLSKR 717          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: M5VNC9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002766mg PE=4 SV=1)

HSP 1 Score: 475.322 bits (1222), Expect = 3.358e-152
Identity = 223/249 (89.56%), Postives = 237/249 (95.18%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF V+K +SHHARFRSTMVSGGGRLR QEDSLNNPI+MVVGTPGRVLQHI+DGN+VYGDIKY+VLDEADTMFDRGFGPDIRKFL PLK+RA KP GQGFQT+LV+ATMTKAVQ LIDEEFQGI HLRTS+LHKKIASARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTL+SSRAVDHFL ENQISTVNYHGEVP EQRVENL KFKSDDGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+
Sbjct:  215 VFRVSKFVSHHARFRSTMVSGGGRLRPQEDSLNNPIEMVVGTPGRVLQHIEDGNLVYGDIKYVVLDEADTMFDRGFGPDIRKFLVPLKHRASKPDGQGFQTVLVSATMTKAVQTLIDEEFQGILHLRTSSLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLSSSRAVDHFLNENQISTVNYHGEVPAEQRVENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 463          

HSP 2 Score: 196.052 bits (497), Expect = 1.453e-49
Identity = 116/214 (54.21%), Postives = 145/214 (67.76%), Query Frame = 2
Query:  206 SPKHFSYYPFLKPSRVFRGFKPFCSAPSPILT----TIDPDD-----LKHSMLLERLRTRHLKHSAK-LPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV-----LVTHPAMIWTS 802
            + K FS     K + V  GF+P C+A +  ++     I+ ++     LKHS+LLE+LR RHLK SAK   S++P+ P Q      Q  +   K + KKK+++  ++F  LGL+EEV+ AVREMGIE PTEIQCIGIP VLE K+VVLGSHTGSGKTLAYMLPL QLLRRDEA  G+  KPRRPRAVVLCPTRELSEQV      V+H A   ++
Sbjct:   25 AAKRFSLIKLPKTTGVLTGFRPLCTATTTTISIPESAIEAEEQETQPLKHSLLLEKLRLRHLKSSAKPQTSANPNGPAQR-----QSEDGLGKPENKKKREV--ENFGGLGLTEEVLAAVREMGIEAPTEIQCIGIPAVLEGKTVVLGSHTGSGKTLAYMLPLAQLLRRDEAENGIQMKPRRPRAVVLCPTRELSEQVFRVSKFVSHHARFRST 231          

HSP 3 Score: 134.42 bits (337), Expect = 3.065e-29
Identity = 90/176 (51.14%), Postives = 110/176 (62.50%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGG-----------SSEGKKLKVVGFRGQAS-SSKRESFTPS 2344
            IDYLHRTGRTARMGAKGKVTSLVAKK+L+LA RIEEAI+KNESLESL+VD+VRRD AR+RI   KG    L + SN KNK+++ SA  +        +KSVK +  +   K     S S + + + +  +K  S G             S   KL VVGFRG+AS S KRES   S
Sbjct:  463 IDYLHRTGRTARMGAKGKVTSLVAKKNLMLANRIEEAIKKNESLESLSVDSVRRDIARSRIAPLKG---NLVRVSNQKNKSRSASAPAKFGKASFQASKSVKPSNASTSRKASSSASSSRKGSSSPSNSRKAPSSGKRQPESRRSSVVKSTASKLSVVGFRGRASWSDKRESVASS 635          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: I1JDA7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 473.781 bits (1218), Expect = 1.556e-151
Identity = 226/249 (90.76%), Postives = 234/249 (93.98%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFR TMVSGGGRLR QEDSLNNPID+VVGTPGRVLQHI++GNMVYGDIKYLVLDEADTMFDRGFGPDIRKF+GPLKNRA KP G GFQTILVTATMTKAVQ LIDEEF GI HLRTSTLHKKI+SARHDFIKL GSENKLEALLQVLEPSLAKGNRVMVFCNTL+SSRAVDHFLGENQIS VNYHGEVP EQRVENL KFKSD  DCPTLVCTDLAARGLDLDV+HVVMFDFPLNS+
Sbjct:  222 VFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDVVVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFIGPLKNRASKPDGLGFQTILVTATMTKAVQNLIDEEFLGIVHLRTSTLHKKISSARHDFIKLAGSENKLEALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHFLGENQISAVNYHGEVPAEQRVENLRKFKSDGDDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSI 470          

HSP 2 Score: 195.282 bits (495), Expect = 2.190e-49
Identity = 115/193 (59.59%), Postives = 133/193 (68.91%), Query Frame = 2
Query:  230 PFLKPSRVFRGFKPFCSAPSPILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            P  KP  +FR F+P CS  +      D    KHS+LLERLR+RHL+ +AK   ++P   P+    +     A       K+KK    SFEELGLSEEVMGAVREMGIEVPTEIQ IGIP VLEEKSVVLGSHTGSGKTLAY+LPL QLLRRDE + G+L KPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:   51 PLPKPLPLFRRFRPLCSVSAAAPEAAD---AKHSILLERLRSRHLRDAAK---AAPE--PRKKEKVAAAAAAAAAAAEAKEKKKAVASFEELGLSEEVMGAVREMGIEVPTEIQSIGIPAVLEEKSVVLGSHTGSGKTLAYLLPLAQLLRRDEQLNGILLKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 235          

HSP 3 Score: 119.398 bits (298), Expect = 2.120e-24
Identity = 77/163 (47.24%), Postives = 97/163 (59.51%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRI-TEQKGKNVKLFKTSNLKNKTKAVSASVRT-SGKEPTIAKSVKSTXX--XXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRE 2329
            IDYLHRTGRTARMGAKGKVTSLVAKKDL LA +IE+A+RKNESLE++T ++VRRD ART+  + +KGK+ +L K S +  K+ +   S    SG +      VKS               + SL  A T   +         S   KL VVGFRG+ SSS  +
Sbjct:  470 IDYLHRTGRTARMGAKGKVTSLVAKKDLDLASKIEDALRKNESLEAITKESVRRDIARTQNQSTEKGKSKRLVKVSKVMGKSGSRFGSGNNGSGMKSGKGSPVKSMKKGIQVSKSGKSSSANSLRKASTEKRQSSKMVSATKSTNSKLNVVGFRGKNSSSNNK 632          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: A0A068TXU1_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_6 OS=Coffea canephora GN=GSCOC_T00034653001 PE=4 SV=1)

HSP 1 Score: 468.774 bits (1205), Expect = 2.352e-151
Identity = 220/249 (88.35%), Postives = 235/249 (94.38%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            V+ VAKSISHHARFRSTMVSGGGRLR QEDSLN PID++VGTPGRVLQHI++GNMVYGDI+YLVLDEADTMFDRGFGPDIRKFLGPLKNRA K  G GFQT+LV+ATMTKAVQKL+DEEFQGI HLRTSTLHKKIASARHDFIKL GSENKLEALLQVLEPSL+KGNRVMVFCNTLNSSRAVDHFL EN ISTVNYHGEVP E+RVENL KFKS+DGDCPTLVCTDLAARGLDLDV+HV+MFDFPL S+
Sbjct:   82 VYRVAKSISHHARFRSTMVSGGGRLRPQEDSLNTPIDLIVGTPGRVLQHIEEGNMVYGDIRYLVLDEADTMFDRGFGPDIRKFLGPLKNRASKHDGLGFQTVLVSATMTKAVQKLVDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHFLHENGISTVNYHGEVPAEERVENLEKFKSEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLTSI 330          

HSP 2 Score: 142.895 bits (359), Expect = 2.049e-32
Identity = 68/82 (82.93%), Postives = 73/82 (89.02%), Query Frame = 2
Query:  524 MGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769
            MGA+ E+ I VPTEIQCIGIP VL  KSVVLGSHTGSGKTLAYMLPLVQLLRRDEA+ G+L +PRRPRAVVLCPTREL EQV
Sbjct:    1 MGALEELSISVPTEIQCIGIPAVLAGKSVVLGSHTGSGKTLAYMLPLVQLLRRDEALNGILMRPRRPRAVVLCPTRELCEQV 82          

HSP 3 Score: 131.339 bits (329), Expect = 8.616e-29
Identity = 86/175 (49.14%), Postives = 108/175 (61.71%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPT------------------IAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGG-----SSEGKKLKVVGFRGQ 2308
            IDYLHRTGRTARMGAKGKVTSLVAKKD +LA RIEEAI KNESLESL+V +V+RD AR RI EQKGK+VKL K S  K+K  A +AS ++SG +                      ++ +++  +K      KVSK+   A +S  +  ++   G     SS   KL VVGFRG+
Sbjct:  330 IDYLHRTGRTARMGAKGKVTSLVAKKDQILATRIEEAILKNESLESLSVGSVQRDIARARINEQKGKSVKLLKAS--KHKKTATAASAKSSGADSKAKPKKGLSKNGAGGKVDLTKRTFRTSPGSKSVTATAKVSKNFSGANSSKAKVSHKEFQGRKPDVSSSRSKLNVVGFRGR 502          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: W9R456_9ROSA (DEAD-box ATP-dependent RNA helicase 39 OS=Morus notabilis GN=L484_002724 PE=4 SV=1)

HSP 1 Score: 472.626 bits (1215), Expect = 3.810e-151
Identity = 221/249 (88.76%), Postives = 233/249 (93.57%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGRLR QEDSLN  IDMVVGTPGR+LQHI DGN+VYGDIKY+VLDEADTMFD GFGPDIRKFLGPLKNRA KP GQGFQT+LV ATMTKAVQ LIDEEFQGI HLRTSTLHKK+ASARHDFIKL GSENKLEALLQVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQ STVNYHGEVP EQRVENL KFK++DGDCPTLVC+DLAARGLDLDV+HV+MFDFPLNS+
Sbjct:  221 VFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNGAIDMVVGTPGRILQHIQDGNIVYGDIKYVVLDEADTMFDHGFGPDIRKFLGPLKNRASKPDGQGFQTVLVAATMTKAVQNLIDEEFQGIVHLRTSTLHKKVASARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLSENQTSTVNYHGEVPAEQRVENLKKFKTEDGDCPTLVCSDLAARGLDLDVDHVIMFDFPLNSI 469          

HSP 2 Score: 185.652 bits (470), Expect = 4.998e-46
Identity = 133/237 (56.12%), Postives = 158/237 (66.67%), Query Frame = 2
Query:  146 MQKAMMAATSRTLLFVSLLS---------SPKHFSYYPFLKPSRVFRGFKPFCSAPSPILTT-------IDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            MQ AM  AT++TLL +SL S         + K FS     KP+R++ GF+P  ++ +   T        I P  LKHS+LLERLR RHLK SAK   +  S    +   +G E         KKK+K++  SFEELGLS+EVMGAVREMGIEVPTEIQ IGIP VLE KSVVLGSHTGSGKTLAYMLPLVQL+R+DEA+ GML KPRRPRAVVLCPTRELSEQV     ++   + F
Sbjct:    1 MQLAMGGATAKTLLTISLSSHLSSLSRFSAAKRFSLLRPPKPTRIYPGFRPLRTSATTTETETVDTDDTIQP--LKHSILLERLRLRHLKDSAKPQETKTSTKKNSDENVGLEKLKESGYGDKKKQKVVG-SFEELGLSDEVMGAVREMGIEVPTEIQSIGIPAVLEGKSVVLGSHTGSGKTLAYMLPLVQLMRQDEAMFGMLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARF 234          

HSP 3 Score: 129.413 bits (324), Expect = 1.017e-27
Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVS 2107
            IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA+RKNESLESL+V++VRRD AR RITEQKGKN KL K +  +++  A S
Sbjct:  469 IDYLHRTGRTARMGAKGKVTSLVAKKDVALATRIEEAMRKNESLESLSVNSVRRDIARARITEQKGKNEKLIKVAKQRSRDSAKS 553          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: M0U4C7_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 465.692 bits (1197), Expect = 1.752e-150
Identity = 216/249 (86.75%), Postives = 233/249 (93.57%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTM+SGGGRLR QEDSL+ PIDMVVGTPGR+LQHI+DGNMVYGDIK+LVLDEADTMFD+GFGPDIRKFLGPLKNRA KP   GFQT+LVTATMTKAVQ L+DEEFQGI HLRTS+  KK+ASARHDFIKL G+ENKLEALLQVLEPSL+KGNRVMVFCNTLNSSRAVDHFL ENQI TVNYHGEVP E+RVENL KFKS+DGDCPTLVCTDLAARGLDLDV+HV+MFDFPLNS+
Sbjct:   76 VFRVAKSISHHARFRSTMISGGGRLRPQEDSLSEPIDMVVGTPGRILQHINDGNMVYGDIKFLVLDEADTMFDQGFGPDIRKFLGPLKNRAAKPGDHGFQTVLVTATMTKAVQNLVDEEFQGIIHLRTSSFQKKVASARHDFIKLSGAENKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHFLTENQIFTVNYHGEVPAEERVENLRKFKSEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSI 324          

HSP 2 Score: 130.954 bits (328), Expect = 1.085e-28
Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 2
Query:  542 MGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            M I VPTEIQCI +P VLE KSVVLGSHTGSGKTLAYMLP+VQL+R+DEA+ G+L +PRRPRAVVLCPTREL EQV     ++   + F
Sbjct:    1 MEISVPTEIQCIAVPAVLEGKSVVLGSHTGSGKTLAYMLPIVQLMRQDEALSGVLMRPRRPRAVVLCPTRELCEQVFRVAKSISHHARF 89          

HSP 3 Score: 114.39 bits (285), Expect = 2.146e-23
Identity = 74/165 (44.85%), Postives = 102/165 (61.82%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAVSASVRTSGKEPTIAKSVKS-TXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGGSSEGKKLKVVGFRGQASSSKRESFTPS 2344
            IDYLHRTGRTARMGAKGKVTSLVAKKD+ LA RIEEA++KNESLE+L+ ++VRRD   ++  +QK K   +   S+ K   KA SA    +  +   + S KS T  A        V    E  + + +++  +SV       KL VVGFRG++S+ +++S  P+
Sbjct:  324 IDYLHRTGRTARMGAKGKVTSLVAKKDIPLATRIEEAMKKNESLEALSANSVRRDAFISKQIDQKYKAKVILTKSSSKAGKKATSAQKSVAASKGKASASTKSKTTVAISKPIKSPVGGKREPTRGNKLQQGRKSVITRIPKSKLSVVGFRGRSSAGRKQSPKPT 488          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: K4DG05_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc12g056740.1 PE=4 SV=1)

HSP 1 Score: 468.774 bits (1205), Expect = 1.069e-149
Identity = 219/249 (87.95%), Postives = 234/249 (93.98%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTMVSGGGRLR QED L +PIDM+VGTPGRVLQHI++GNMVYGDI+YLVLDEADTMFDRGFGPDIRKFL PLKNRA K   +GFQT+LVTATMTKAVQKL+DEEFQGIEHLRTS+LHKKIASARHDFIKL GSENK+EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL E QISTVNYHGEVP EQRVENL KFKS++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+
Sbjct:  204 VFRVAKSISHHARFRSTMVSGGGRLRPQEDCLASPIDMIVGTPGRVLQHIEEGNMVYGDIRYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKTDDEGFQTVLVTATMTKAVQKLVDEEFQGIEHLRTSSLHKKIASARHDFIKLSGSENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLNETQISTVNYHGEVPAEQRVENLAKFKSNEGDCPTLVCTDLAARGLDLDVDHVIMFDFPKNSI 452          

HSP 2 Score: 170.629 bits (431), Expect = 4.426e-41
Identity = 127/226 (56.19%), Postives = 149/226 (65.93%), Query Frame = 2
Query:  161 MAATSRTLLFVSLLSSPKHF--SYYPFL-KPSRVFRGFKPFCS----APSPILTTIDPDDL---KHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            M  T R LL +SLL  P  F  +  P L +P RV+ GF+P  S    APS      + D L   KHS+LLERLR RHL+ S K P+S          ++ ++ E  D G  K KKK +A SFEELGL+EEVMGA+ EMGI  PTEIQ IGIP V+E KSVVLGSHTGSGKTLAYMLP+VQLLRRDE + GML KPRRPRAVVLCPTREL EQV     ++   + F
Sbjct:    1 MGVTGRALLNLSLL--PFRFPLTRNPLLPQPRRVYLGFRPLSSTTTTAPSYAAVAEEEDALQPVKHSILLERLRLRHLRESPK-PNSEIKQ------LVRKQVEVDDGGVKKSKKKAVASSFEELGLTEEVMGALGEMGISEPTEIQSIGIPAVIEGKSVVLGSHTGSGKTLAYMLPIVQLLRRDEELDGMLMKPRRPRAVVLCPTRELCEQVFRVAKSISHHARF 217          

HSP 3 Score: 125.946 bits (315), Expect = 1.526e-26
Identity = 85/172 (49.42%), Postives = 100/172 (58.14%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNKTKAV---SASV-------RTSGKEPTIAKSVKSTXXXXXXXXXXXXXXSLETAKTS-AVRKKNRSVGGSSEG---------KKLKVVGFRGQ 2308
            IDYLHRTGRTARMGAKGKVTSL+AKKDLLLA  IEEAI+KNESLESL+VD ++RD AR+RITEQK K  K  K SN + K  A    S+SV       + S K     +S K+T   +          +    K +  V KK  S  G             KKL VVGFRG+
Sbjct:  452 IDYLHRTGRTARMGAKGKVTSLIAKKDLLLANCIEEAIKKNESLESLSVDGIKRDNARSRITEQKDKREKSVKVSNSRGKATASTGKSSSVTRKTIDSKRSAKTTDSKRSPKTTDSKRSPGTKFGKVPAKSKPKIAMKVSKKTSSSTGKRRVDSRSSSVSTKKLNVVGFRGR 623          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: M1C4K2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023195 PE=4 SV=1)

HSP 1 Score: 467.233 bits (1201), Expect = 4.442e-149
Identity = 219/249 (87.95%), Postives = 233/249 (93.57%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            VF VAKSISHHARFRSTM+SGGGRLR QED L +PIDM+VGTPGRVLQHI++GNMVYGDIKYLVLDEADTMFDRGFGPDIRKFL PL NRA K   QGFQT+LVTATMTKAVQKL+DEEFQGIEHLRTS+LHKKIASARHDFIKL GSENK+EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL E QISTVNYHGEVP EQRVENL KFKS++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+
Sbjct:  206 VFRVAKSISHHARFRSTMISGGGRLRPQEDCLASPIDMIVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLNNRASKTGDQGFQTVLVTATMTKAVQKLVDEEFQGIEHLRTSSLHKKIASARHDFIKLSGSENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLNETQISTVNYHGEVPAEQRVENLAKFKSNEGDCPTLVCTDLAARGLDLDVDHVIMFDFPKNSI 454          

HSP 2 Score: 167.933 bits (424), Expect = 3.806e-40
Identity = 125/228 (54.82%), Postives = 146/228 (64.04%), Query Frame = 2
Query:  161 MAATSRTLLFVSLLSSPKHFSYYPFL-KPSRVFRGFKPFCS----APS-------PILTTIDPDDLKHSMLLERLRTRHLKHSAKLPSSSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQVLVTHPAMIWTSEF 808
            M  T R LL +SLL      +  P L  P RV+ GF+P  S    APS            + P  +KHS+LLERLR RHLK S K P+S          ++ ++ E  D G  K KKK +A SFEELGL+EEVMGA+ EMGI  PTEIQ IGIP V+E KSVVLGSHTGSGKTLAYMLP+VQLLRRDE + GML KPRRPRAVVLCPTREL EQV     ++   + F
Sbjct:    1 MGVTGRALLNLSLLPFRFPLTRNPLLPHPRRVYLGFRPLSSTITTAPSYAAAAAAEEEDALQP--VKHSILLERLRLRHLKESPK-PNSEIKQ------LVRKQAEVDDGGVKKSKKKAVASSFEELGLTEEVMGALGEMGISEPTEIQSIGIPAVIEGKSVVLGSHTGSGKTLAYMLPMVQLLRRDEELDGMLMKPRRPRAVVLCPTRELCEQVFRVAKSISHHARF 219          

HSP 3 Score: 123.635 bits (309), Expect = 7.338e-26
Identity = 61/80 (76.25%), Postives = 68/80 (85.00%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTSNLKNK 2092
            IDYLHRTGRTARMGAKGKVTSL+AKKDLLLA  IEEAI+KNESLESL+VD ++RD AR+RITEQK K  K  K SN + K
Sbjct:  454 IDYLHRTGRTARMGAKGKVTSLIAKKDLLLANCIEEAIKKNESLESLSVDGIKRDNARSRITEQKDKREKSVKVSNSRGK 533          
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Match: K3XFN8_SETIT (Uncharacterized protein OS=Setaria italica GN=Si000707m.g PE=4 SV=1)

HSP 1 Score: 462.996 bits (1190), Expect = 1.172e-147
Identity = 213/249 (85.54%), Postives = 232/249 (93.17%), Query Frame = 3
Query:  981 VFSVAKSISHHARFRSTMVSGGGRLRSQEDSLNNPIDMVVGTPGRVLQHIDDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKPSGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLLGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPPEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVNHVVMFDFPLNSV 1727
            V+ VAKSISHHARFRSTMVSGG RLR QEDSLN P+DMVVGTPGR+L HI DGNMVYGDIKYLVLDEADTMFD+GFGPDIRKFL PLKNRA KP  QGFQT+LVTATMTKAVQKLIDEEF+GI HLRTST  K++A+ARHDFIKL GSENKLEALLQVLEPSLAKGN++MVFCNTLNSSRAVDHFL ENQISTVNYHGEVP E+RVENLNKF++++GDCPTLVCTDLAARGLDLDV+HV+MFDFP NS+
Sbjct:  192 VYRVAKSISHHARFRSTMVSGGTRLRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRATKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTSTFQKRVATARHDFIKLTGSENKLEALLQVLEPSLAKGNKIMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSI 440          

HSP 2 Score: 165.622 bits (418), Expect = 1.741e-39
Identity = 84/127 (66.14%), Postives = 100/127 (78.74%), Query Frame = 2
Query:  389 SSPSMPPQNLPVLGQETEAYDXXXXXXXXXIMADSFEELGLSEEVMGAVREMGIEVPTEIQCIGIPFVLEEKSVVLGSHTGSGKTLAYMLPLVQLLRRDEAILGMLTKPRRPRAVVLCPTRELSEQV 769
             SP++PP+     G E  +    +G++ +   A+SFEELGL EEVM A+ EMGI  PTEIQC+G+P VL+  SVVLGSHTGSGKTLAY+LPLVQLLRRDEA+LGM  KPRRPRAVVLCPTREL+EQV
Sbjct:   68 GSPNLPPRGKAARGGERTSQHPQQGRRVEA--AESFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLDGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQV 192          

HSP 3 Score: 103.219 bits (256), Expect = 2.137e-19
Identity = 77/178 (43.26%), Postives = 103/178 (57.87%), Query Frame = 2
Query: 1853 IDYLHRTGRTARMGAKGKVTSLVAKKDLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKTS------NLKNKTKAV--SASVRTSGKE--------PTIAKSVKSTXXXXXXXXXXXXXXSLETAKTSAVRKKNRSVGG--SSEGKKLKVVGFRGQASSSKRES 2332
            IDYLHRTGRTARMGAKGKVTSLVAKK++ LA +IEEA++KNESLE+LT +NVRR  A  +    KG+  +  KTS      N K +   V  S S RT            P I    K +A  + +K +   + S++ +K+ A     ++ G   +  G KL VVGFRG++S    +S
Sbjct:  440 IDYLHRTGRTARMGAKGKVTSLVAKKNVALATKIEEAMKKNESLEALTTNNVRR-AANPQSASTKGRTSRSAKTSSALKVVNQKGRRGVVLSSKSSRTPKDTTSTRRRLPPKIQPKAKKSAAPQKAKLVKPANNSVKVSKSKAKPAGRKAKGDILNKLGTKLSVVGFRGRSSGKSAQS 616          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
RH39_ORYSJ6.234e-14985.54DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sa... [more]
RH39_ARATH6.444e-14684.74DEAD-box ATP-dependent RNA helicase 39 OS=Arabidop... [more]
DBP2_GIBZE1.121e-2628.17ATP-dependent RNA helicase DBP2 OS=Gibberella zeae... [more]
DBP2_SCLS11.248e-2630.08ATP-dependent RNA helicase dbp2 OS=Sclerotinia scl... [more]
DBP2_BOTFB1.281e-2630.92ATP-dependent RNA helicase dbp2 OS=Botryotinia fuc... [more]
DBP2_NEOFI1.560e-2628.86ATP-dependent RNA helicase dbp2 OS=Neosartorya fis... [more]
DDX3_DROME1.913e-2632.28ATP-dependent RNA helicase bel OS=Drosophila melan... [more]
DBP2_ASPCL2.642e-2629.32ATP-dependent RNA helicase dbp2 OS=Aspergillus cla... [more]
DRS1_CANAL5.105e-2631.23ATP-dependent RNA helicase DRS1 OS=Candida albican... [more]
DBP2_MAGO75.730e-2627.82ATP-dependent RNA helicase DBP2 OS=Magnaporthe ory... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0098040 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
F6HJE2_VITVI6.642e-15390.76Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A059BSP8_EUCGR7.636e-15389.96Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
M5VNC9_PRUPE3.358e-15289.56Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
I1JDA7_SOYBN1.556e-15190.76Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A068TXU1_COFCA2.352e-15188.35Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
W9R456_9ROSA3.810e-15188.76DEAD-box ATP-dependent RNA helicase 39 OS=Morus no... [more]
M0U4C7_MUSAM1.752e-15086.75Uncharacterized protein OS=Musa acuminata subsp. m... [more]
K4DG05_SOLLC1.069e-14987.95Uncharacterized protein OS=Solanum lycopersicum GN... [more]
M1C4K2_SOLTU4.442e-14987.95Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K3XFN8_SETIT1.172e-14785.54Uncharacterized protein OS=Setaria italica GN=Si00... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 163..230
e-value: 5.6E-8
score: 42.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 134..231
e-value: 1.8E-18
score: 66.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 134..243
score: 11.868
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 131..235
e-value: 1.7E-25
score: 88.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..114
e-value: 5.8E-26
score: 90.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..233
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 3..98
e-value: 1.5E-18
score: 67.1
NoneNo IPR availablePANTHERPTHR24031:SF247DEAD-BOX ATP-DEPENDENT RNA HELICASE 39coord: 1..232
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..232
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..109
score: 16.495

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0098040 ID=g.barbadense_cottongen_reftransV1_0098040; Name=g.barbadense_cottongen_reftransV1_0098040; organism=Gossypium barbadense; type=contig; length=2758bp
CTACTCCCAAAGTCCCAAGAGAAAATGGATGATATTGGGACCTTACCTCC
CTAGTGCCTTGAAAGCTTCGCTAATGCTGCAAACAAATACAAAGTAGCAG
CAGGGAAAACAAAACCAAAAACTATATCTGGCCTCACAGAACATGATGCA
GAAAGCTATGATGGCTGCTACTTCAAGAACTCTCCTTTTTGTCTCTCTTC
TTTCCTCTCCCAAACATTTCTCTTACTACCCTTTTCTCAAACCCTCTAGG
GTTTTTCGAGGGTTTAAGCCTTTCTGCTCTGCCCCATCCCCAATCCTCAC
CACCATTGATCCTGACGACTTGAAACACTCCATGCTACTTGAAAGGCTTA
GAACCAGACATCTCAAACATTCTGCGAAACTCCCATCCTCATCACCCTCT
ATGCCTCCACAAAACCTGCCTGTTTTGGGTCAAGAGACCGAGGCTTATGA
TAAGGGGAAAGGGAAAAAGAAGAAGAAAATTATGGCCGATAGTTTTGAGG
AGTTGGGTTTGAGTGAAGAAGTGATGGGTGCTGTTAGAGAGATGGGGATT
GAAGTTCCTACTGAGATTCAGTGTATCGGGATTCCTTTTGTATTGGAAGA
GAAAAGTGTGGTTTTGGGTTCTCATACTGGCTCTGGCAAGACTCTTGCAT
ACATGTTGCCACTTGTTCAGTTGCTGAGGCGGGATGAGGCAATATTAGGC
ATGCTAACAAAGCCCAGGCGTCCACGAGCCGTTGTTCTATGCCCCACAAG
AGAGCTGTCTGAGCAGGTTTTGGTTACTCACCCTGCTATGATTTGGACCT
CCGAATTTGTTCTATATTTATAGACTTTGACTTTTATCACTTGGGAGCAT
CCAAGATGAAAGTCTCTTGCACAGTTTTGAGTGAGAGAAAGAATAGAGGA
ATCCTCTTTTCGACTCTTACTCTCCCACTCTGCTCACTTCTTTTCTTTTT
GTTACTAGATTAATGTTAGTGGCTTTTTAGGTTTTTAGTGTGGCAAAGTC
TATTAGCCATCATGCAAGATTTAGGTCTACTATGGTCAGTGGGGGAGGCC
GGTTAAGATCACAAGAGGACTCTTTGAATAACCCAATTGACATGGTAGTT
GGGACCCCTGGTAGGGTCCTTCAACATATTGATGACGGGAACATGGTTTA
TGGTGACATCAAATACTTGGTTTTGGATGAGGCTGACACTATGTTTGACC
GTGGCTTTGGTCCTGACATTCGCAAGTTTCTTGGTCCATTAAAAAATCGT
GCTCTAAAACCCAGTGGCCAAGGATTTCAAACTATTTTAGTGACAGCTAC
AATGACAAAGGCTGTGCAGAAACTGATTGATGAGGAATTTCAAGGAATAG
AACATCTACGAACATCAACACTGCACAAGAAAATAGCATCTGCTCGTCAT
GATTTCATCAAACTTTTGGGTTCTGAAAACAAGCTGGAAGCATTACTGCA
GGTTCTTGAGCCAAGTTTAGCTAAGGGGAACAGAGTAATGGTGTTTTGTA
ATACATTAAATTCTAGCCGTGCTGTTGATCATTTTCTTGGTGAAAATCAG
ATCTCTACTGTAAATTACCATGGCGAGGTGCCTCCAGAACAAAGGGTTGA
AAACCTGAACAAGTTCAAGAGTGATGATGGAGACTGTCCCACATTGGTTT
GCACGGACTTGGCTGCTAGAGGGCTGGACTTGGATGTTAATCATGTTGTC
ATGTTTGATTTCCCTTTAAACTCTGTAAGCAACATTTCTTTGATCAACTT
GTTTGGGTCTTAGCTTGCCCTTCTCTCAAACCTGAACTCCTTTGCTTTTG
TGCCCCCTTTCTTTATGGTTCTATTTTTTCTCACTTCTGTTTGGCCTTTT
AGATCGACTACCTTCATCGCACTGGAAGAACTGCACGAATGGGTGCCAAA
GGGAAAGTAACAAGTTTGGTGGCTAAAAAGGACTTATTGTTGGCAGAAAG
GATAGAGGAGGCAATAAGAAAGAATGAGAGTTTGGAATCTCTTACAGTTG
ATAATGTCCGAAGGGATACTGCAAGGACTCGGATTACCGAGCAGAAGGGG
AAGAATGTTAAACTGTTTAAGACGTCGAATCTGAAAAACAAGACCAAAGC
TGTGTCTGCATCTGTGCGGACATCAGGGAAAGAACCCACAATTGCAAAGT
CGGTAAAATCTACTGCTCCAGCCAAACCTTCAAAGAAAATAGTTAAGGTC
TCAAAAAGTTTGGAGACTGCAAAAACATCTGCCGTACGAAAGAAAAACAG
GTCAGTTGGTGGGAGTTCTGAAGGCAAAAAACTGAAGGTTGTTGGATTTA
GGGGACAAGCTTCCTCGAGCAAGAGAGAATCGTTTACACCAAGTTGATTG
TGGTCAAAGTTTGGAATTCTGCAAATGGCTTTTAACATGTTATCAATCAA
TAGTTGAAAAAAAAAATCATGTTAAATTCATATCTCTCTTATCTTAGCAC
TTAGAATTGATTGCAACACATCTATATTTGTTTTTCCACTTTGCACCCTT
AAAGGTTAGCTGAGGATGTCTTAGTGGGAGTTTATATTAGCCTGTTGTGC
AGAAAATTCATACATGGATTGGGGATAGAGATTTAAGGGTTCCCCCCCCC
CCCTCCTGTATGGATGGGTATTGATTTTGTTCCATTACGACTGTTAATGC
AACGCATAGAATTCAGTAGTGCTTAGGGTTATAAATATACCAGGAGGAGG
TTTGTTTTTACAGGATATTCTGATATTTTGAACATTTTCTATCAATTATG
TTGACAGG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C-like
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding