g.barbadense_cottongen_reftransV1_0098020, g.barbadense_cottongen_reftransV1_0098020 (contig) Gossypium barbadense

BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PNDC1_HUMAN (Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 OS=Homo sapiens GN=PNLDC1 PE=2 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 9.426e-8
Identity = 45/156 (28.85%), Postives = 67/156 (42.95%), Query Frame = 1

Query: 1477 AAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXC---------PEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHL 1917
            +A GF     +L    K +VGHN ++D+ H+H KF  PLP + ++F   ++  FP +IDTK  +  D   +    R S        L           PEI H             + E +V+        +   HEA YDAF+ G V  +  +HL
Sbjct:  234 SARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPVLIDTKS-VTKDIWKEMNFPRVSNLSEVYEVLNSDLNPTKNSGPEIVHA-----------SRCEKYVE--------TKCPHEAAYDAFLCGSVLLKV-AHL 368          

BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: A0A0B2RIN0_GLYSO (Poly(A)-specific ribonuclease PARN OS=Glycine soja GN=glysoja_022537 PE=4 SV=1)

HSP 1 Score: 437.573 bits (1124), Expect = 9.121e-134
Identity = 228/392 (58.16%), Postives = 287/392 (73.21%), Query Frame = 1

Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELL-----PSDKEESHDNTRSHLESAMDSPQAVEKSKSRNTEDVVNDSS 2589
            ++VK ++ R  EMKI AAVGFRHVIDLLSSE KLIVG+NC LDIAHV+SKF+ PLP T EEFV+ VNK FP I+DTKILL+ +   Q KMKRS  SL+SAF+  CP+IA G     L     VKV V VD+ RS +W+ G KHEAGYDAFMTGC+FAQ CS LGIDF+LH  S+ L  NEKLQK++N LYLSW+  DIIDL TGN+ A+ S S+ + K Y KI+F+NI+++WGF SKLK + IR+CI K  GPTSV+  + +D TA FVQFSK ELVSDFL +K++LE+S  AIS LHPLS+LLEGGNT  A+Y+TY+EIC S +S+ LFADQAEAVGIKWKT+L         KE  + + + ++ +AM +   VE++K    + + N  S
Sbjct:  528 KKVKEENHRAEEMKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGTPEEFVASVNKCFPHIVDTKILLSTNLMFQEKMKRSRKSLASAFTSFCPQIAAGSRSTDLGSLSHVKVNVEVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLHDSSKQLALNEKLQKYVNRLYLSWMQRDIIDLNTGNKVADSSLSHSLTKRYPKIMFENIVIIWGFSSKLKANEIRECISKVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSGGAISVLHPLSKLLEGGNTCGANYDTYREICGSSLSEGLFADQAEAVGIKWKTKLTEYKVASRGKEHENPSVQDNVNTAMKN---VERAKPNTIDQLGNAPS 916          

HSP 2 Score: 196.823 bits (499), Expect = 1.570e-48
Identity = 105/195 (53.85%), Postives = 133/195 (68.21%), Query Frame = 3

Query:  432 HPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGE-STSEELVVYTDSESDKARLMVR 1013
            H HNF+VF RQE+       EFLCQTTSMDFLAKYQFDFNACIHEGISYLSR QE +A + L S   D        L++  D+PL+  AD+LFT RMK +  EWRD L Q +    Q + +  D   +F+  FF+M PAL L+GFTSHQL LI+++ RKHFKDL+YV  N E S S++LVVYTD + D+  L+++
Sbjct:  338 HGHNFYVFPRQELAGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQERKALRSLNSTY-DSEWSDIGKLKDVRDIPLLSAADILFTARMKNKFSEWRDGLFQEQNQEDQIQGISKD--SKFQVTFFEMHPALRLNGFTSHQLKLIQLLIRKHFKDLSYVSVNSEASGSQQLVVYTDLK-DELNLLLK 528          

BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: V7BL00_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G058000g PE=4 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 5.745e-133
Identity = 223/355 (62.82%), Postives = 275/355 (77.46%), Query Frame = 1

Query: 1399 DSSPLPGSM*EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTEL 2463
            DS     S+ ++VK ++    +MKI AAVG RHVIDLLSSE KLIVGHNC LD+AHV+SKF+ PLP T EEFV+ VNK FP I+DTKILLN ++ L  KMKRS  SL++AF+  CP+IA G T +       VKVEV VD++RSS+WN G KHEAGYDAFMTGC+FAQ CS LGID++LH  S+ L  +EKLQ ++N LYLSW++GDIIDL TGN+  + S S  +RK Y KILF+NI+++WGFPSKLK + +R+CI K  GPTSV+  + +D TAVFVQFSK ELVSDFL+LK TLE S+ A+  LHPLS+LLEGGNT AA+Y TYKEIC SP+S+ LFADQ +AVGIKWKT+L
Sbjct:  296 DSKDELNSLLKKVKEENHGAEKMKIQAAVGLRHVIDLLSSEQKLIVGHNCFLDLAHVYSKFIGPLPDTPEEFVTSVNKCFPHIVDTKILLNTNFMLHEKMKRSRKSLAAAFTSFCPQIAAGSTSSYPGSLSHVKVEVEVDDVRSSSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDYKLHDSSKQLALDEKLQNYVNRLYLSWMHGDIIDLSTGNKVGDSSPSYSLRKRYPKILFENIVIIWGFPSKLKANEVRECISKVFGPTSVVSVFHLDATAVFVQFSKTELVSDFLSLKNTLEGSDGALLVLHPLSKLLEGGNTCAANYGTYKEICGSPLSECLFADQVKAVGIKWKTKL 650          

HSP 2 Score: 328.946 bits (842), Expect = 1.560e-95
Identity = 172/301 (57.14%), Postives = 218/301 (72.43%), Query Frame = 3

Query:  126 LSRALSRAFSDTPSPT------FPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGESTS-EELVVYTDSESDKARLM 1007
            LSRA++RA    P+ T      FP K VT +NFE +L ELR HVR++DFVAID+EM+G+TSAPWRES EFDR D+RYLKV+DSA KFAV+QFGVCPFRWDS   SF+A+PH+F+VF RQE        EFL QTTSMDFLAKYQFDFNACIHEGISYLSR QE +A + L S   D        L++  D+PL+  AD+LFT RMK +  EWRD LL  +    +++   D  + +F+ +FF+M PAL L+GFTSHQL LI++V RKHFKDL+YV  N E+++ ++LVVYTDS+ +   L+
Sbjct:   10 LSRAVARAL--CPATTTQCDSAFPSKTVTTANFEPSLAELRRHVRSSDFVAIDLEMSGITSAPWRESLEFDRSDVRYLKVRDSATKFAVVQFGVCPFRWDSSNNSFVAYPHSFYVFPRQEHAGLGPCDEFLWQTTSMDFLAKYQFDFNACIHEGISYLSREQERKALRSLNSTY-DSEWSDICKLKDVRDMPLLSAADILFTARMKNKFREWRDGLLHEQ--NLEDQIQGDTGDSKFQEMFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSEASNLQQLVVYTDSKDELNSLL 305          

BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: M1C0A3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022169 PE=4 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 6.774e-133
Identity = 207/343 (60.35%), Postives = 264/343 (76.97%), Query Frame = 1

Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKT 2457
            +EVK   ++ AEMK+ +AVGFRHVIDLLSSE KLIVGHNC LD+AH++SKF+ PLPSTAE++VS + K FP+I+DTKILLNA+   ++ + +S+TSLS AF  +CP IA G   + L+  PCV+VEV VDE RSSNWNSGAKHEAGYDAFMTGC+FAQAC+HLGIDF LH    +L +  KLQ ++N LYLSW++G++IDL +G  + + S S+ ++  Y+ I F +I+LLWG PSKLK   IR  I +  GP SV   Y +D++AVF+QFSK ELVS FL LKETL +++D IS LHPLS +L G NT AA+Y+ Y++IC+S ISK LFADQAEAVGIK KT
Sbjct:  128 KEVKDGLRKEAEMKVESAVGFRHVIDLLSSERKLIVGHNCFLDVAHMYSKFIGPLPSTAEDYVSSLQKLFPTIVDTKILLNANGVFRQTLNKSNTSLSRAFVSICPHIALGIKTSSLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTLHVLGGDLAKETKLQNYINRLYLSWVSGNVIDLSSGKCTPDSSASSNLKSRYQDISFPSIILLWGLPSKLKAREIRAYIAQAFGPNSVSSVYHLDESAVFIQFSKPELVSKFLELKETLSRNSDPISVLHPLSNILNGENTHAATYDVYQQICSSSISKKLFADQAEAVGIKHKT 470          

HSP 2 Score: 123.25 bits (308), Expect = 4.209e-26
Identity = 63/127 (49.61%), Postives = 83/127 (65.35%), Query Frame = 3

Query:  657 NLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGESTS-EELVVYTDSESDKARLMVRHNTSVRK 1034
             L E  D PLVR+ADVLF ERMK  + EWRD LL       + +++  D +Q+F+ VFFK RP L+L  FTS QL +I+ VT+KHFKDL Y+   GE+TS ++L+VYTDS  D+  LM      +RK
Sbjct:   10 GLSEDADFPLVRMADVLFAERMKSTIREWRDSLLSKGSCSSEIKQISTDPSQRFQMVFFKTRPGLALSDFTSRQLRVIKAVTKKHFKDLAYIRVAGEATSPQQLIVYTDSNYDRDLLMKEVKDGLRK 136          

BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: M1C0A5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022169 PE=4 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 6.537e-131
Identity = 202/331 (61.03%), Postives = 256/331 (77.34%), Query Frame = 1

Query: 1465 MKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKT 2457
            MK+ +AVGFRHVIDLLSSE KLIVGHNC LD+AH++SKF+ PLPSTAE++VS + K FP+I+DTKILLNA+   ++ + +S+TSLS AF  +CP IA G   + L+  PCV+VEV VDE RSSNWNSGAKHEAGYDAFMTGC+FAQAC+HLGIDF LH    +L +  KLQ ++N LYLSW++G++IDL +G  + + S S+ ++  Y+ I F +I+LLWG PSKLK   IR  I +  GP SV   Y +D++AVF+QFSK ELVS FL LKETL +++D IS LHPLS +L G NT AA+Y+ Y++IC+S ISK LFADQAEAVGIK KT
Sbjct:    1 MKVESAVGFRHVIDLLSSERKLIVGHNCFLDVAHMYSKFIGPLPSTAEDYVSSLQKLFPTIVDTKILLNANGVFRQTLNKSNTSLSRAFVSICPHIALGIKTSSLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTLHVLGGDLAKETKLQNYINRLYLSWVSGNVIDLSSGKCTPDSSASSNLKSRYQDISFPSIILLWGLPSKLKAREIRAYIAQAFGPNSVSSVYHLDESAVFIQFSKPELVSKFLELKETLSRNSDPISVLHPLSNILNGENTHAATYDVYQQICSSSISKKLFADQAEAVGIKHKT 331          

BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: M1C0A1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022169 PE=4 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 5.646e-130
Identity = 207/343 (60.35%), Postives = 264/343 (76.97%), Query Frame = 1

Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKT 2457
            +EVK   ++ AEMK+ +AVGFRHVIDLLSSE KLIVGHNC LD+AH++SKF+ PLPSTAE++VS + K FP+I+DTKILLNA+   ++ + +S+TSLS AF  +CP IA G   + L+  PCV+VEV VDE RSSNWNSGAKHEAGYDAFMTGC+FAQAC+HLGIDF LH    +L +  KLQ ++N LYLSW++G++IDL +G  + + S S+ ++  Y+ I F +I+LLWG PSKLK   IR  I +  GP SV   Y +D++AVF+QFSK ELVS FL LKETL +++D IS LHPLS +L G NT AA+Y+ Y++IC+S ISK LFADQAEAVGIK KT
Sbjct:  316 KEVKDGLRKEAEMKVESAVGFRHVIDLLSSERKLIVGHNCFLDVAHMYSKFIGPLPSTAEDYVSSLQKLFPTIVDTKILLNANGVFRQTLNKSNTSLSRAFVSICPHIALGIKTSSLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTLHVLGGDLAKETKLQNYINRLYLSWVSGNVIDLSSGKCTPDSSASSNLKSRYQDISFPSIILLWGLPSKLKAREIRAYIAQAFGPNSVSSVYHLDESAVFIQFSKPELVSKFLELKETLSRNSDPISVLHPLSNILNGENTHAATYDVYQQICSSSISKKLFADQAEAVGIKHKT 658          

HSP 2 Score: 363.614 bits (932), Expect = 2.265e-108
Identity = 178/288 (61.81%), Postives = 216/288 (75.00%), Query Frame = 3

Query:  174 FPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGESTS-EELVVYTDSESDKARLMVRHNTSVRK 1034
            F +K+VT+SNFESAL +LR  +R ADFVA+D+EMTGVTSAPWRESF++DR+DI YLKVKDSAEKFAV+QFGVCPFRWDS KQSFIAHPHNF++F RQEIP    S EFLCQTTS+DFLAKYQFDFN C+ EGISYLSR QE EA +R+ S   D+       L E  D PLVR+ADVLF ERMK  + EWRD LL       + +++  D +Q+F+ VFFK RP L+L  FTS QL +I+ VT+KHFKDL Y+   GE+TS ++L+VYTDS  D+  LM      +RK
Sbjct:   37 FDIKNVTKSNFESALKDLRGLLRDADFVAVDLEMTGVTSAPWRESFDYDRYDISYLKVKDSAEKFAVVQFGVCPFRWDSHKQSFIAHPHNFYIFPRQEIPGSNQSREFLCQTTSLDFLAKYQFDFNLCVREGISYLSRSQEKEALERISSIYMDESSDSVFGLSEDADFPLVRMADVLFAERMKSTIREWRDSLLSKGSCSSEIKQISTDPSQRFQMVFFKTRPGLALSDFTSRQLRVIKAVTKKHFKDLAYIRVAGEATSPQQLIVYTDSNYDRDLLMKEVKDGLRK 324