g.barbadense_cottongen_reftransV1_0098020, g.barbadense_cottongen_reftransV1_0098020 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PARN_ARATH (Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana GN=PARN PE=1 SV=2) HSP 1 Score: 390.578 bits (1002), Expect = 9.001e-121 Identity = 198/343 (57.73%), Postives = 252/343 (73.47%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKT 2457 +E K + +R AE KI +A+GFR VIDLL+SE KLIVGHNC LDIAHV+SKF+ PLPSTAE+FV+ +N +FP I+DTKILLN + L ++MK+SSTSLSSAFS LCP+I + + V ++V +D +R SNWN+G KHEAGYDAFMTGC+FAQAC+HLG DF+ HS ++ QNEKL+K++N LYLSW GDIIDLRTG+ SN K ++NI+L+W FP KLK I++CICK G SV Y +D +AVFV F +ELV DFL LK LE S+ +S LHPLS++LEGGNT AA YE YKEIC+S +S+V+F+DQAE VG+K +T Sbjct: 312 KEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVDTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCSNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTRGDIIDLRTGH-------SNADNWRVSKFKYENIVLIWNFPRKLKARGIKECICKAFGSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAADYEAYKEICSSHVSEVMFSDQAETVGVKSRT 647 HSP 2 Score: 368.622 bits (945), Expect = 1.584e-112 Identity = 189/314 (60.19%), Postives = 228/314 (72.61%), Query Frame = 3 Query: 87 MNTTRHWPQRAFILSRALSRA------FSDTPSPTFPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGESTSE-ELVVYTDSESDKARLM 1007 M + WP R+ + S + S A + + + FPLKHVTRSNFE+ L +LRS V+AADFVAID+EMTGVTSAPWR+S EFDR+D+RYLKVKDSAEKFAV+QFGVCPFRWDS QSF+++PHNFFVF RQE+ D ++EFLCQTTSMDFLAKYQFDFN CIHEGISYLSR +E+EA KRL G+ I S ET +L LVR+ADVLF RM+K L EWR LL + ++ + NQ TVF MRPALSL GFTSHQL ++ V RKHF DL Y+ N +S+S ++VVYTDS+SDK LM Sbjct: 1 MRRHKRWPLRSLVCSFSSSAAETVTTSTAASATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFFVFPRQELTFDPPAHEFLCQTTSMDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSG---ETEELKLVRLADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIVVYTDSDSDKENLM 311
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PARNL_ARATH (Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana GN=At3g25430 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.830e-31 Identity = 85/281 (30.25%), Postives = 139/281 (49.47%), Query Frame = 3 Query: 174 FPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVF-----FKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGESTSEELV--VYTDSESDK 995 + +K V +SNF L E+R+ + ++DF+A+ ++ TG +A W D YLK K +AE++ +LQF +CPF K HP+NF +F R E+ SY F CQ + + +A+ FDFN CI+EGISYLSR QE ++ +P ++ S + + VAD +F R++ R+ WR + + + DDL R + + R L++D + Q+ LI + + D+ + +S + V V+ S+ DK Sbjct: 24 WSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSK--LTVHPYNFHLFPRDELKCGMPSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASKFLSENP----ILADSVTVSSSP----ATVADTVFVGRIRSRVKNWRQSCIDS-----GSKTGDDDLVSSLRRLVLGSEQYGSRLCLTIDVCSERQVQLILEMLTEFSDDVVPLLVASKSRGTQAVRTVFMSSKEDK 289 HSP 2 Score: 62.3882 bits (150), Expect = 1.536e-8 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 1 Query: 1486 GFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIID 1653 GFR V+D +SS K +V N + D +H+KFL PLPS ++F S ++ FP+++D Sbjct: 309 GFREVVDFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSSLSSAFPNVVD 364
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PARN_DANRE (Poly(A)-specific ribonuclease PARN OS=Danio rerio GN=parn PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 8.817e-23 Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 3 Query: 186 HVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFE--FDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTS--YEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKG 632 VTR NF+ L E+ + V+ ADF++ID E TG++ P + D + RY K++ + F + QFGVC FR+D + ++I NF++F + P RTS +F+CQ++S+DFLA FDFN GI YL++ +E + R++ +G Sbjct: 2 EVTRQNFKEVLPEVCNAVQEADFISIDGEFTGISDGPSVSALTNGLDTPEERYTKLRKHSMNFLLFQFGVCTFRYDQNQSTYITKAFNFYIFPK---PFSRTSPDIKFICQSSSIDFLASQGFDFNKVFRSGIPYLNQEEECQLREQYEERRG 151 HSP 2 Score: 80.4925 bits (197), Expect = 4.289e-14 Identity = 74/272 (27.21%), Postives = 118/272 (43.38%), Query Frame = 1 Query: 1471 INAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNA--------DYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEK-LQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELV 2259 +N AVGF VI +S KL+VGHN +LD+ H +F PLP ++F FP ++DTK++ + + +L K+ + CPE ++S + ++ HEAGYDAF+TG F ++LG F L P +++ K L+ N L+L +ID+ N +SG ++ K ++ +L FP + K S + + G V +D T+ FV S+ E V Sbjct: 262 LNDAVGFSRVIRAISKSGKLVVGHNMLLDVMHTIHQFCGPLPEELDDFKEVAMTVFPRLLDTKLMASTQPFKEIIHNTSLAELHKQLRQKPFRPPTTECPE-----------------------GLQSYDTSTEQLHEAGYDAFITGLCFISMANYLG-SF-LTPPKSHISARSKLLEPFYNKLFLM----RVIDIPYLN----MSGPDLQPK-------RDHVLYVTFPKEWKTSDLYQ-LFSAFGNIQVSW---VDDTSAFVSLSQTEQV 489
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PARN_XENLA (Poly(A)-specific ribonuclease PARN OS=Xenopus laevis GN=parn PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.784e-21 Identity = 51/141 (36.17%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 186 HVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFE--FDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTS--YEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQE 596 +TRSNF+ L ++ + ADF+AID E +G++ P + FD + RY K+K + +F + QFG+C F +D+ + ++ NF++F + P +R S +F+CQ++S+DFLA FDFN GI YL++ +E Sbjct: 2 EITRSNFKDTLPKVYKAIEEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYTKLKKHSMEFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPK---PFNRNSPDKKFVCQSSSIDFLANQGFDFNKVFRNGIPYLNQEEE 139 HSP 2 Score: 76.6406 bits (187), Expect = 6.397e-13 Identity = 80/291 (27.49%), Postives = 128/291 (43.99%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMK--INAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNAD-----------YTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKL-QKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELV 2259 E + + Q++A+ + ++ AVGF +I +SS KL+VGHN +LD+ H +F LP EF N FP ++DTK++ + + L++++K + + A GF +S N S HEAGYDA++TG F ++LG F L P + ++ K+ + N L+L I+D+ N L G ++ +P R N+L + FP + K S + G V ID T+ FV S+ E V Sbjct: 247 ERKRMEQQKQAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMASTNPFKEIIYNTSLAELEKRLKEAPFKPPKV------DSAEGF--------------------QSYNTASEQLHEAGYDAYITGLCFISMANYLG-SF-LSPPKDYVSCRSKIVRPFFNKLFLM----RIMDIPYLN----LEGPDL--QPKR----DNVLHV-TFPKEWKTSDLYQLFS-AFGNIQVSW---IDDTSAFVSLSQPEQV 490
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PARN_HUMAN (Poly(A)-specific ribonuclease PARN OS=Homo sapiens GN=PARN PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.804e-21 Identity = 54/147 (36.73%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 186 HVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFE--FDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTS--YEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKR 614 + RSNF+S L ++ + ADF AID E +G++ P + FD + RY K+K + F + QFG+C F++D +I NF+VF + P +R+S +F+CQ++S+DFLA FDFN GI YL++ +E + R++ Sbjct: 2 EIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHSMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPK---PFNRSSPDVKFVCQSSSIDFLASQGFDFNKVFRNGIPYLNQEEERQLREQ 145 HSP 2 Score: 73.559 bits (179), Expect = 5.068e-12 Identity = 77/291 (26.46%), Postives = 126/291 (43.30%), Query Frame = 1 Query: 1429 EEVKTDHQRRA--EMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNAD-----------YTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKL-QKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELV 2259 E + + Q+ A + ++N AVGF VI +++ KL++GHN +LD+ H +F PLP+ EF FP ++DTK++ + L++++K + + E A GF SY+ S HEAGYDA++TG F ++LG F L P +++ KL + N L+L ++D+ N L G ++ K ++ +L FP + K S + + I ID T+ FV S+ E V Sbjct: 248 ERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV------ESAEGFP----SYDTA----------------SEQLHEAGYDAYITGLCFISMANYLG-SF-LSPPKIHVSARSKLIEPFFNKLFLM----RVMDIPYLN----LEGPDLQPK-------RDHVLHVTFPKEWKTS----DLYQLFSAFGNIQISWIDDTSAFVSLSQPEQV 491
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PARN_BOVIN (Poly(A)-specific ribonuclease PARN OS=Bos taurus GN=PARN PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 4.474e-21 Identity = 54/147 (36.73%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 186 HVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFE--FDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTS--YEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKR 614 + RSNF+S L ++ + ADF AID E +G++ P + FD + RY K+K + F + QFG+C F++D +I NF+VF + P +R+S +F+CQ++S+DFLA FDFN GI YL++ +E + R++ Sbjct: 2 EIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKHSMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPK---PFNRSSPDVKFVCQSSSIDFLASQGFDFNKVFRNGIPYLNQEEERQLREQ 145 HSP 2 Score: 74.7146 bits (182), Expect = 2.235e-12 Identity = 77/291 (26.46%), Postives = 126/291 (43.30%), Query Frame = 1 Query: 1429 EEVKTDHQRRA--EMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNAD-----------YTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKL-QKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELV 2259 E + + Q+ A + ++N AVGF VI +++ KL++GHN +LD+ H +F PLP+ EF FP ++DTK++ + L++++K + + E A GF SY+ S HEAGYDA++TG F ++LG F L P +++ KL + N L+L ++D+ N L G ++ K ++ +L FP + K S + + I ID T+ FV S+ E V Sbjct: 248 ERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV------ESAEGFP----SYDTA----------------SEQLHEAGYDAYITGLCFISMANYLG-SF-LSPPKSHVSARSKLIEPFFNKLFLM----RVMDIPYLN----LEGPDLQPK-------RDHVLHVTFPKEWKTS----DLYQLFSAFGNIQISWIDDTSAFVSLSQPEQV 491
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PARN_PONAB (Poly(A)-specific ribonuclease PARN OS=Pongo abelii GN=PARN PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.756e-20 Identity = 52/147 (35.37%), Postives = 84/147 (57.14%), Query Frame = 3 Query: 186 HVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFE--FDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRT--SYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKR 614 + RSNF+ L ++ + ADF AID E +G++ P + FD + RY K+K + F + QFG+C F++D +I NF+VF + P +R+ +F+CQ++S+DFLA FDFN GI YL++ +E + R++ Sbjct: 2 EIIRSNFKCNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHSMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPK---PFNRSPPDVKFVCQSSSIDFLASQGFDFNKVFRNGIPYLNQEEERQLREQ 145 HSP 2 Score: 73.559 bits (179), Expect = 5.112e-12 Identity = 78/291 (26.80%), Postives = 126/291 (43.30%), Query Frame = 1 Query: 1429 EEVKTDHQRRA--EMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNAD-----------YTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKL-QKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELV 2259 E + + Q+ A + ++N AVGF VI +++ KL++GHN +LD+ H +F PLP+ EF FP ++DTK++ + L++++K + S E A GF SY+ S HEAGYDA++TG F ++LG F L P +++ KL + N L+L ++D+ N L G ++ K ++ +L FP + K S + + I ID T+ FV S+ E V Sbjct: 248 ERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFSPPKV------ESAEGFP----SYDTA----------------SEQLHEAGYDAYITGLCFISMANYLG-SF-LSPPKIHVSARSKLIEPFFNKLFLM----RVMDIPYLN----LEGPDLQPK-------RDHVLHVTFPKEWKTS----DLYQLFSAFGNIQISWIDDTSAFVSLSQPEQV 491
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PARN_MOUSE (Poly(A)-specific ribonuclease PARN OS=Mus musculus GN=Parn PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.019e-19 Identity = 52/148 (35.14%), Postives = 83/148 (56.08%), Query Frame = 3 Query: 186 HVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFE--FDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTS--YEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRL 617 + RSNF+ L ++ + ADF AID E +G++ P + FD + RY K+K + F + QFG+C F++D + NF+VF + P R+S +F+CQ++S+DFLA FDFN GI YL++ +E + R++ Sbjct: 2 EIIRSNFKINLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTSGFDTPEERYQKLKKHSMDFLLFQFGLCAFKYDHTDSKHVTKSFNFYVFPK---PFSRSSPDVKFVCQSSSIDFLASQGFDFNKVFCSGIPYLNQEEERQLREQF 146 HSP 2 Score: 70.8626 bits (172), Expect = 4.084e-11 Identity = 73/280 (26.07%), Postives = 117/280 (41.79%), Query Frame = 1 Query: 1456 RAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNAD-----------YTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKL-QKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELV 2259 + + ++N AVGF VI +++ KL+VGHN +LD+ H +F PLP+ EF FP ++DTK++ + L++++K + E A GF S + S HEAGYDA++TG F ++LG L P ++ KL + N L+L ++D+ N L G ++ K ++ +L FP + K S + + I ID T+ FV S+ E V Sbjct: 252 KEQEELNDAVGFSRVIHAIANSGKLVVGHNMLLDVMHTIHQFYCPLPADLNEFKEMAICVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFDPPKV------ESAEGFP--------------------SYDTASEQLHEAGYDAYITGLCFISMANYLGS--LLSPPKMCVSARSKLIEPFFNKLFLM----RVMDIPYLN----LEGPDLQPK-------RDHVLHVTFPKEWKTS----DLYQLFSAFGNIQISWIDDTSAFVSLSQPEQV 484
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: PNDC1_PONAB (Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 OS=Pongo abelii GN=PNLDC1 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.375e-8 Identity = 44/155 (28.39%), Postives = 68/155 (43.87%), Query Frame = 1 Query: 1477 AAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLN---ADYTLQR-----KMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHL 1917 +A GF +L K +VGHN ++D+ H+H KF PLP + ++F ++ FP +IDTK + + R K+ S + PEI H + E +V+ + HEA YDAF+ G V + +HL Sbjct: 234 SARGFSAFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPVLIDTKSVTKDIWKEMNFPRVSNLSKVYEVLNSDLNPTKNSGPEIVHA-----------SRCEKYVE--------TKCPHEAAYDAFLCGSVLLKV-AHL 368
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Match: YGS9_SCHPO (Uncharacterized protein C29A10.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A10.09c PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 5.606e-8 Identity = 42/136 (30.88%), Postives = 69/136 (50.74%), Query Frame = 3 Query: 201 NFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDI---RYLKVKDSAEKFAVLQFGVC-PFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQE 596 NF L EL HV +A +V+ID E +G+ F + + RY ++ S+ ++ +LQ G+ + ++ K S I N + E+ L R +F + +S+ FL + FDFN + EG+ YLSR +E Sbjct: 7 NFLETLKELEKHVDSAHYVSIDCEFSGLL-----RDFNLNNKNTLQDRYELLRKSSIRYTILQIGITFIYLQNNGKSSCIPVNINVSPLVKDELHLKR---DFCSEASSIKFLIQQGFDFNKQLTEGVPYLSRIEE 134
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: B9GFM7_POPTR (CAF1 family ribonuclease family protein OS=Populus trichocarpa GN=POPTR_0001s37710g PE=4 SV=2) HSP 1 Score: 464.537 bits (1194), Expect = 3.962e-147 Identity = 238/347 (68.59%), Postives = 283/347 (81.56%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNV-LSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELL 2466 +EV D++R+AEMKI AA+GFRHVIDLLSSE KLIVGHNC LD+AH+HSKFL PLP AEEFV VNK FP IIDTKILLN + L+++MK+S TSLSSAF LCP+IA + L++ VKVEV VD+ RSS+W SG KHEAGYDAFMTGCVFAQAC+ LGIDF+L+SPSENL NE+LQKH NLLYLSWINGDIIDL TG+R+AE ++K ILF+NI+L+WGFPSKLK ++I+D I K GPTSV +D+TAVFVQFSK +LV+DFL +KETLE+SNDA S LHPLS +L GGNT AASYETYK+IC+SPISK+LFADQAEAVGI+WKT+L+ Sbjct: 299 KEVMDDYRRQAEMKIKAAIGFRHVIDLLSSEKKLIVGHNCFLDLAHIHSKFLGPLPLEAEEFVYSVNKCFPYIIDTKILLNTNNILKQRMKKSKTSLSSAFLSLCPQIAFASNESCNLTFSSSVKVEVQVDDTRSSSWISGVKHEAGYDAFMTGCVFAQACNLLGIDFKLYSPSENLACNERLQKHANLLYLSWINGDIIDLSTGHRTAESLRCRDLKKSQTGILFENIVLIWGFPSKLKTAVIKDRISKVFGPTSVTSICRLDETAVFVQFSKLKLVADFLVVKETLERSNDAFSVLHPLSTIL-GGNTCAASYETYKDICSSPISKLLFADQAEAVGIRWKTKLV 644 HSP 2 Score: 397.512 bits (1020), Expect = 1.325e-121 Identity = 193/295 (65.42%), Postives = 236/295 (80.00%), Query Frame = 3 Query: 126 LSRALSRAFSDTPSPTFPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQ-EEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGEST-SEELVVYTDSESDKARL 1004 L ALSRA+ T S +FPLKHVT+SNFE+A+ +L++H++AADFVAID+EMTGVTSAPWRES EFDRFD++YLKVKDSAEKFAV+Q GVCPFRWD L+ SFIAHPHNFF+F RQE+P+D +SYEFLCQTTS+DFLAKY FDFN CI +G+SYLSRGQEDEA + L L + + + D+PLV + D+LF+ERMK RL EWRD LL++ GG Q E +D NQQF+ +F+KMRPALSL+GFTS QL LI+ VT+KHFKDL V GES+ S++LVVYTDSESD+ L Sbjct: 9 LRTALSRAYYCTFSSSFPLKHVTQSNFETAVADLKTHLKAADFVAIDLEMTGVTSAPWRESLEFDRFDVKYLKVKDSAEKFAVVQLGVCPFRWDPLRLSFIAHPHNFFIFPRQEVPIDSSSYEFLCQTTSIDFLAKYHFDFNVCIRQGVSYLSRGQEDEALRLL------NLRYENELSEQARDVPLVSITDILFSERMKNRLREWRDGLLKDTSGGSQLEGSFLNDSNQQFQNIFYKMRPALSLNGFTSRQLRLIQSVTKKHFKDLASVRVEGESSCSQQLVVYTDSESDRDLL 297
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: W9R1C8_9ROSA (Poly(A)-specific ribonuclease PARN OS=Morus notabilis GN=L484_018210 PE=4 SV=1) HSP 1 Score: 466.848 bits (1200), Expect = 6.913e-147 Identity = 235/351 (66.95%), Postives = 286/351 (81.48%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNR-SAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELLPSDK 2478 +EV +H++RAE KI AAVGFRHV+DLLSSE KLIVGHNC LDIAHV++KF+ PLPSTAEEFVS V+KYFP IIDTKILLN L+++MK+S TSLSSAF+LLCP I+ F + E VKVEV VD++RSS+WNSGAKH+AGYDAFMTGC+FAQAC ++GIDF+LHSPSE+L +NEKLQKH+NLLYLSW N DIIDL GN+ +A + S +K Y ++F+N++L+WGFPS+LK IR+C KT G TSV Y +D TAVFVQFSK +LVSDFL+L ETLE++ND IS LHPLS+LL+GGNTRAA+YETYK+IC +PISKVLFADQAEA G K KT+ + S K Sbjct: 331 KEVNNEHRKRAEKKIQAAVGFRHVVDLLSSERKLIVGHNCFLDIAHVYNKFIGPLPSTAEEFVSSVSKYFPHIIDTKILLNTHQVLRQRMKKSKTSLSSAFTLLCPHISLSFA----ALESYVKVEVEVDDLRSSSWNSGAKHDAGYDAFMTGCIFAQACGYIGIDFKLHSPSESLAENEKLQKHINLLYLSWTNADIIDLTNGNKVTASVEYSQ--KKRYSNVVFENVVLIWGFPSELKARHIRECFSKTFGVTSVTFVYQMDPTAVFVQFSKTKLVSDFLSLMETLEKNNDPISVLHPLSELLKGGNTRAATYETYKQICGTPISKVLFADQAEAFGAKRKTDFVESSK 675 HSP 2 Score: 354.755 bits (909), Expect = 9.994e-105 Identity = 182/304 (59.87%), Postives = 224/304 (73.68%), Query Frame = 3 Query: 174 FPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIP-LDRTSYEFLCQTTSMDFLAKYQFDFNACIHE---------------GISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGEST-SEELVVYTDSESDKARLMVRHNTSVRK 1034 FP K VTRSNFE+AL ELR HVRAADFVA+D+EM+GVTSAPWRES FDR D+ YLKVK SAEKFAV+QFGVCPFRWDS KQ+F+A+PHNF++F RQE+P +DR+SYEF+ QT S+DFLA+YQFDFNACI E GISYLSR QEDEA +RL S D+ +N ++ D+PLV +AD+LF+ERMK RL EW D LLQ R Q + +D Q+F+T+FF M PA++L GFTSHQL LI++V RK+FKDLTYV G++ S+ LVVYTDS+ D+ L+ N RK Sbjct: 36 FPQKLVTRSNFEAALAELRRHVRAADFVAVDLEMSGVTSAPWRESLGFDRSDVLYLKVKHSAEKFAVIQFGVCPFRWDSSKQTFVAYPHNFYIFPRQELPTIDRSSYEFIWQTGSIDFLARYQFDFNACIREEMLSVCEFEPNWVISGISYLSRRQEDEALRRLNSGDEDESSATCYNSKDAGDIPLVAMADILFSERMKNRLSEWHDWLLQPRNREFQFQGSSNDSKQKFQTLFFMMWPAVNLIGFTSHQLRLIQLVVRKNFKDLTYVHVKGDNVFSQHLVVYTDSKDDRDLLIKEVNNEHRK 339
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: A0A067K130_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22700 PE=4 SV=1) HSP 1 Score: 463.766 bits (1192), Expect = 2.147e-146 Identity = 250/412 (60.68%), Postives = 302/412 (73.30%), Query Frame = 1 Query: 1393 CDDSSPLPGSM*EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNV-LSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELLPSDKEESHDNTRSHLESAMDSPQAVEKSKSRNTEDVVNDSSNKRFCDDIIDSF 2625 C +S + ++VK + + +AEMKI AVGFRHVIDLLSS KLIVGHNC LDIAH++SKF PLP TAEEFV+ VNK+FP I+DTKILLNA+ L R+MK+S TSLSSAF LLCPEIA G + ++++ V VEV VD+ R S +SG KHEAGYDAFMTGCVFAQACSHLGIDF L S+NL NEKLQKH+NLLYLSW NGDII+LRTGNR AE +N I+K + KILF+NI+L+W FPS LK S IR+CICK G SV Y +D+TAV VQFSK+ELVSDFL LKE L++SND IS HPLS+LLEGGNT AA YETYKEIC+SP SKVLFADQA AVGI +T+L+ S + + + AV+KSK+ + + S + C ++IDSF Sbjct: 292 CTESEDDKDLLMKQVKDECREKAEMKIKDAVGFRHVIDLLSSAQKLIVGHNCFLDIAHIYSKFFGPLPLTAEEFVASVNKHFPHIVDTKILLNANDVLLRRMKKSRTSLSSAFRLLCPEIALGSNDSSDIAFDRQVNVEVQVDDTRFSKLSSGVKHEAGYDAFMTGCVFAQACSHLGIDFDLQLSSDNLAHNEKLQKHVNLLYLSWFNGDIINLRTGNRIAESLVTNNIKKRHTKILFENIVLIWRFPSTLKASEIRECICKVFGQNSVTSIYKVDETAVLVQFSKSELVSDFLVLKEELDRSNDVISVFHPLSKLLEGGNTCAAEYETYKEICSSPFSKVLFADQAAAVGIGSQTKLVESKV----------VAQSQEQETAVKKSKAVKQRVIDDLLSGQSSCTEVIDSF 693 HSP 2 Score: 402.519 bits (1033), Expect = 4.388e-123 Identity = 201/307 (65.47%), Postives = 243/307 (79.15%), Query Frame = 3 Query: 96 TRHWPQRAFILSRALSRAFSDTPSPT-FPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISP-KGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGESTS-EELVVYTDSESDKARLM 1007 ++ WP RA LSRALSR +S + S + FPLKHVT+SNFESAL +L+SHV AADF+AID+EMTG+TSAPWRES E+DRFD+RYLK KDSAEKFA++QFGVCPFRWDS + SFIAHPHNFF+F RQE+ D SYEFLCQTTSMDFLAKYQFDFNACI+EG+SYLSRGQE+EA +RL S + D ++ NL + DLPL V ++LF+ERM KRL EWRD LL+ GG Q + ++ QQ +T+F+KMRPAL L GFTSHQL LI+MV +KHFKDL YV N ES+ ++LVV T+SE DK LM Sbjct: 2 SKQWPLRA--LSRALSRVYSSSSSSSSFPLKHVTKSNFESALAKLKSHVGAADFIAIDLEMTGITSAPWRESLEYDRFDVRYLKAKDSAEKFAIVQFGVCPFRWDSHRHSFIAHPHNFFIFPRQELATDGPSYEFLCQTTSMDFLAKYQFDFNACIYEGVSYLSRGQEEEALRRLYSRYESDGML---DNLNDVRDLPLASVTNILFSERMTKRLREWRDGLLREGNGGFQFQGSFNNSRQQLQTIFYKMRPALCLSGFTSHQLKLIQMVVKKHFKDLAYVHVNVESSCLQQLVVCTESEDDKDLLM 303
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: K7LAC6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 443.736 bits (1140), Expect = 2.420e-141 Identity = 229/390 (58.72%), Postives = 286/390 (73.33%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELLP---SDKEESHDNTRSHLESAMDSPQAVEKSKSRNTEDVVNDSS 2589 ++VK ++ R E KI AAVGFRHVIDLLSSE KLIVG+NC LDIAHV+SKF+ PLP + +EFV+ VNK FP I+DT ILLN + Q KMKRS SL+SAF+L CP+IA G L VKV+V VD RS +WN G KHEAGYDAFMTGC+FAQ CS LGIDF+L S L NEKLQK++N LYLSWI+GDIIDL TGN+ A+ S S+ ++K Y ILF+NI+++WGFPSKLK + +R+CI K GPTSV+ + +D TA FVQFSK ELVSDFL +K++LE+S+ AIS LHPLS+LLEGGNT AA+Y+TY EIC SP+S+ LFADQA+ VGIKWKT+L + + E H+N + + VEK+K + + N SS Sbjct: 96 KKVKEENHRAEEKKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGSPDEFVASVNKCFPHIVDTIILLNTNLMFQEKMKRSRKSLASAFTLFCPQIAAGSRSTDLGSLSHVKVDVEVDGSRSCSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLRDSSNQLALNEKLQKYVNRLYLSWIHGDIIDLNTGNKVADSSPSHSLKKRYPTILFENIVIIWGFPSKLKANEVRECISKAFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSDGAISVLHPLSKLLEGGNTCAANYDTYNEICGSPLSEGLFADQAKKVGIKWKTKLTECKVASRGEEHENPSLQANDVNTAMKNVEKTKPNTIDQLGNASS 485 HSP 2 Score: 98.5969 bits (244), Expect = 4.300e-18 Identity = 51/99 (51.52%), Postives = 69/99 (69.70%), Query Frame = 3 Query: 720 MKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGE-STSEELVVYTDSESDKARLMVR 1013 MK + GEWRD L Q + Q + + D +F+ FF+M PAL L+GFTSHQL LI++V RKHFKDL+YV N E S S++LVVYTDS+ D+ L+++ Sbjct: 1 MKNKFGEWRDGLFQEQNQEDQIQGISKD--SKFQVTFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSETSGSQQLVVYTDSK-DELNLLLK 96
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: A0A068UZK7_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_76 OS=Coffea canephora GN=GSCOC_T00038750001 PE=4 SV=1) HSP 1 Score: 444.121 bits (1141), Expect = 9.321e-139 Identity = 224/345 (64.93%), Postives = 272/345 (78.84%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTEL 2463 +E+K + AEMKI AA+GFRHVIDLLSSE KLIVGHN LDIAH++ KF+ PLPSTA+E V + K+FP I+DTK+LLNA Q+ +K+SSTSLS AF+LLCP+IA G + L+ + VKVEV VD RS NWNSGAKHEAGYDAFMTGCVFAQACSHLG+DF L+ S +L+ +EKLQ+++NLLYLSWINGDIIDL+TG R + S + + KILF N +LLWGFP+KLK S IR+C CK G +S+ Y +D+TAVF+QFSK ELVSDFL LKETLE+SND IS LHPLS++L+GG TRAASYE YK+IC+S ISKV FADQAEAVGI+W +L Sbjct: 313 KELKDCLCKEAEMKIKAAIGFRHVIDLLSSEKKLIVGHNSFLDIAHIYRKFIGPLPSTAKECVISIQKFFPYIVDTKVLLNASTVCQKILKKSSTSLSKAFALLCPQIASGVKTSGLADKRLVKVEVQVDNKRSLNWNSGAKHEAGYDAFMTGCVFAQACSHLGVDFTLNPSSVDLSHHEKLQEYINLLYLSWINGDIIDLKTGERKTDSICSKGFKAHHSKILFSNTVLLWGFPAKLKASEIRECFCKVFGSSSITFIYHLDKTAVFIQFSKEELVSDFLVLKETLERSNDPISVLHPLSKVLQGGRTRAASYEVYKQICSSTISKVFFADQAEAVGIEWNAKL 657 HSP 2 Score: 387.111 bits (993), Expect = 3.148e-117 Identity = 181/279 (64.87%), Postives = 220/279 (78.85%), Query Frame = 3 Query: 171 TFPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGESTSEELVVYTDSESDKARLM 1007 TF +K+VT+SNFESAL +LR +V+ ADFVA+D+EMTGVTSAPWRESFE DRFDI+YLKVKDSAEKFA +QFGVCPFRW+ +QSF+AHPHNF++F RQEI D TSYEFLCQTTS++FLAKYQFDFN CI EG+SYLSR QE EA RL + D+L+ S RE D LVRVAD+LF+ER+K ++ EW D LL +R G Q K +D QQ +T+FFKMRPAL L GFTSHQL LI++V + HF+DL Y C GES+S++L+VY DS SD+ LM Sbjct: 34 TFAIKNVTKSNFESALNDLRLYVKDADFVAVDLEMTGVTSAPWRESFELDRFDIQYLKVKDSAEKFAAVQFGVCPFRWEPHRQSFVAHPHNFYIFPRQEIKGDDTSYEFLCQTTSINFLAKYQFDFNLCIREGVSYLSRSQEKEALGRLNARYKDRLLDSSSCWREGVDTKLVRVADILFSERLKNKIAEWHDGLLGDRNGASQTWKTSNDSKQQLKTIFFKMRPALDLTGFTSHQLRLIQLVVKNHFEDLVYACVAGESSSQQLIVYADSASDRDLLM 312
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: A0A059BR37_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02044 PE=4 SV=1) HSP 1 Score: 444.891 bits (1143), Expect = 9.350e-139 Identity = 238/415 (57.35%), Postives = 307/415 (73.98%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELLPSD--KEES---HDNTRSHLESAMDS--PQAVEKSKSRNTEDVVNDSSNKRFCDDIIDSFL--KVEKIR 2646 +EV+ +++R E+KI++AVGFRHVIDLLSSE KLIVGHNC LD+AH++ KF LP TAEEFVS N++ P I+DTK+LLN+ L+ M+RS TSLSS+F LCP+IA G+T L+ + CVKVEV VD++R+S+WN+GAKHEAGYDAFMTGCVFAQACSHLGI F HS SE L ++E L+K++N LYLSW N DIID TG+ + GS + + Y K L + I+L+WGFP KLK I++CICK GPTSV Y +D+T VFVQF +AELVSDFL +KETLE+++DAIS L+PL ++LEGGNT AA YETYKEIC+SP+SKV F+DQA A GIKWKT+LL S+ EE + S LE+A+DS + KSK ++D + SS+ C I+DS +VE++R Sbjct: 322 KEVEDENRRGEELKIHSAVGFRHVIDLLSSEQKLIVGHNCFLDVAHIYRKFFGELPFTAEEFVSSANEHLPYIVDTKVLLNSSDILKYWMRRSKTSLSSSFVRLCPQIALGYTSTDLASKACVKVEVQVDDLRASSWNAGAKHEAGYDAFMTGCVFAQACSHLGIKFHPHSSSEILARDEILEKYVNRLYLSWNNRDIIDFSTGSVTGNSVGSTYLNQ-YSKFLCEKIILIWGFPPKLKAREIKECICKVFGPTSVTSVYSLDKTTVFVQFKEAELVSDFLVMKETLERNDDAISILNPLWRVLEGGNTCAADYETYKEICSSPVSKVYFSDQARAAGIKWKTKLLKSEVPGEEGIRKQGDANSSLENAVDSIMDKTNLKSKKSASDDTNHRSSS---CGAILDSLCAHEVERVR 732 HSP 2 Score: 358.607 bits (919), Expect = 2.988e-106 Identity = 181/317 (57.10%), Postives = 226/317 (71.29%), Query Frame = 3 Query: 126 LSRALSRAF--------SDTPSP-TFPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPL-------------DRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGESTS-EELVVYTDSESDKARLM 1007 LSRALSRA S P+P TFP+K+VTRSNFE AL LR HVRAAD+VA+D+EMTGVTSAPWRESFEFDR+D+RYLKVKDSAEKFAV+QFGVCPFRWD + F+AHPHNF++F RQE+ D ++YEFLCQT S+DFLAKYQFDFN CI EGISYLSR QE+E + L + H +E D+PL+ +ADVLF+ER+K R+ EW D+LL +R Q + +D QQ +T+F++ RPAL+L GFT+HQL LI+ VTR HF+D+ YVC N ++ + L+VYTD +DK LM Sbjct: 10 LSRALSRALTTTTATAGSQAPTPSTFPIKNVTRSNFEPALESLREHVRAADYVAVDLEMTGVTSAPWRESFEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDPQELCFVAHPHNFYIFPRQELSFDVYIFPRQELSFDDPSAYEFLCQTASVDFLAKYQFDFNMCIREGISYLSREQENELLRHLEESSCSRNKH-----KEFRDVPLISIADVLFSERIKNRIKEWHDELLHDRNCELQFNESSNDSKQQLQTIFYRTRPALALSGFTAHQLRLIQQVTRNHFEDIVYVCMNVQNACVQPLLVYTDGNTDKDLLM 321
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: K7LAC5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 442.965 bits (1138), Expect = 3.021e-138 Identity = 229/390 (58.72%), Postives = 286/390 (73.33%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELLP---SDKEESHDNTRSHLESAMDSPQAVEKSKSRNTEDVVNDSS 2589 ++VK ++ R E KI AAVGFRHVIDLLSSE KLIVG+NC LDIAHV+SKF+ PLP + +EFV+ VNK FP I+DT ILLN + Q KMKRS SL+SAF+L CP+IA G L VKV+V VD RS +WN G KHEAGYDAFMTGC+FAQ CS LGIDF+L S L NEKLQK++N LYLSWI+GDIIDL TGN+ A+ S S+ ++K Y ILF+NI+++WGFPSKLK + +R+CI K GPTSV+ + +D TA FVQFSK ELVSDFL +K++LE+S+ AIS LHPLS+LLEGGNT AA+Y+TY EIC SP+S+ LFADQA+ VGIKWKT+L + + E H+N + + VEK+K + + N SS Sbjct: 309 KKVKEENHRAEEKKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGSPDEFVASVNKCFPHIVDTIILLNTNLMFQEKMKRSRKSLASAFTLFCPQIAAGSRSTDLGSLSHVKVDVEVDGSRSCSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLRDSSNQLALNEKLQKYVNRLYLSWIHGDIIDLNTGNKVADSSPSHSLKKRYPTILFENIVIIWGFPSKLKANEVRECISKAFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSDGAISVLHPLSKLLEGGNTCAANYDTYNEICGSPLSEGLFADQAKKVGIKWKTKLTECKVASRGEEHENPSLQANDVNTAMKNVEKTKPNTIDQLGNASS 698 HSP 2 Score: 356.295 bits (913), Expect = 1.448e-105 Identity = 182/302 (60.26%), Postives = 215/302 (71.19%), Query Frame = 3 Query: 126 LSRALSRAFSDTP-----SPTFPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGE-STSEELVVYTDSESDKARLMVR 1013 LSRAL+RA S P FP K VT +NFE +L ELR HVR +DFVAID+EMTGVTSAPWRES FDR D+RYLKV+DSA KFAV+QFGVCPFRWD SF+AHPHNF+VF RQEI EFLCQTTSMDFLAKYQFDFNACIHEGISYLSR QE EA + L S L+ D+PL+ AD+LFT RMK + GEWRD L Q + Q + + D +F+ FF+M PAL L+GFTSHQL LI++V RKHFKDL+YV N E S S++LVVYTDS+ D+ L+++ Sbjct: 11 LSRALARALSSATITTHCGPAFPSKTVTTANFEPSLAELRHHVRCSDFVAIDLEMTGVTSAPWRESLAFDRSDVRYLKVRDSAAKFAVVQFGVCPFRWDPSNHSFVAHPHNFYVFPRQEIAGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQEREALRSLNSTYDSSEWSDIGKLKNVRDIPLLSTADILFTARMKNKFGEWRDGLFQEQNQEDQIQGISKD--SKFQVTFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSETSGSQQLVVYTDSK-DELNLLLK 309
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: A5BKV2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007764 PE=4 SV=1) HSP 1 Score: 439.499 bits (1129), Expect = 7.114e-137 Identity = 240/419 (57.28%), Postives = 293/419 (69.93%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELLPSDK--EESHDNTRSHLESAMDSP-QAVEKSKSRNTEDVVNDSSNKRFC-DDIIDSFL----KVEKIRRTTNL 2661 +EVK +R AEMKI AVGFRHVIDLLSSE KLIVGHNC+LDIAH+++KF PLP TAE+FVS ++KYFP +IDTKILLN + L+ MK STSLS AFS LCP+IA + L+++P V+VEV VD+MRSSNWNSGAKHEAGYDAFMTGCVFAQACS+LGIDF+ HS S NL N+ LQKH+N LY SW+NGDIIDL TGNR A + +++ Y KILF NI+++WGFPS+L IR+CI K GP SV Y +D+TAVFVQFSK ELV+DFL P + SYETYKEIC+SPISKV+FADQA+AVGIKWKT+L+ S + + D + S A D+ +KSK+R EDV++D S+ R +IIDS K+ K RTTNL Sbjct: 316 KEVKDGLRREAEMKIKTAVGFRHVIDLLSSEQKLIVGHNCLLDIAHIYNKFFGPLPLTAEDFVSSIHKYFPYMIDTKILLNTNNVLKHLMKNGSTSLSKAFSSLCPQIASSSKNSGLAFKPWVEVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSNLGIDFKKHSSSANLAHNKNLQKHVNHLYFSWVNGDIIDLSTGNRIAATAVCYNLKRRYPKILFSNIVIVWGFPSQLSSKKIRECISKVFGPISVTMIYHLDETAVFVQFSKPELVADFL--------------FCIPSQYCWKVETLVLPSYETYKEICSSPISKVMFADQAKAVGIKWKTKLIESKEKVKTQEDESFSKENGATDAASDPADKSKTRKIEDVIDDLSDDRISGSEIIDSLYAAQTKLSKHIRTTNL 720 HSP 2 Score: 410.609 bits (1054), Expect = 6.171e-126 Identity = 199/324 (61.42%), Postives = 246/324 (75.93%), Query Frame = 3 Query: 99 RHWPQRAFILSRALSRAF------------SDTPSPTFPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGESTSEELVVYTDSESDKARLMVRHNTSVRK 1034 + WP F LS +L+R S T SPTF LK+VT+SNFES+L +LR HVR ADFVAID+EMTGVTSAPWRESFEFDRFD++YLKVKDSAEKFAV+QFGVCPFRWDS + F+AHPHNF+VF RQE+P+D SYEFLCQTTS+DFLAKYQFDFNACI+EG+SYLSR QE+E + L S D++ N++E D PLV VADVLF+ERMK R EWR +LLQ+R GG Q + +D+ QQF+T+FFKMRPAL L+GFT+HQL LI++V +KHFKDL Y+ +G+ + EL+VY DS++DK LM +R+ Sbjct: 2 KQWPLLRF-LSESLTRTLAAHSAYTLRFLSSATASPTFALKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSAEKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVFPRQELPVDGPSYEFLCQTTSIDFLAKYQFDFNACIYEGVSYLSREQENEMLRCLNSECDDEMSLLWRNMKEVRDTPLVSVADVLFSERMKNRFNEWRKELLQDRKGGSQFLETSNDMKQQFQTIFFKMRPALILNGFTAHQLRLIQLVIKKHFKDLVYIRSSGDGSYSELIVYIDSDNDKNLLMKEVKDGLRR 324
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: K7MQH2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 431.795 bits (1109), Expect = 1.405e-134 Identity = 225/398 (56.53%), Postives = 287/398 (72.11%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELLP---SDKEESHDNTRSHLESAMDSPQAVEKSKSRNTEDVVNDSSNKRFCDDI 2613 ++VK ++ R EMKI AAVGFRHVIDLLSSE KLIVG+NC LDIAHV+SKF+ PLP T EEFV+ V+K FP I+DTKILL+ + Q KMKRS SL+SAF+ CP+IA G L VKV V VD+ RS +W+ G KHEAGYDAFMTGC+FAQ CS LGIDF+LH S+ L NEKLQK++N LYLSW++ DIIDL TGN+ A+ S ++ ++ Y KI+F+NI+++WGF SKLK + IR+CI K GPTSV+ + +D TA FVQFSK ELVSDFL +K++LE+S AIS LHPLS+LLEGGNT A+Y+TY+EIC S +S+ LFADQAEAVGIKWKT+L + + + H+N S D+ V K+ R + ++ N C + Sbjct: 270 KKVKEENHRAEEMKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGTPEEFVASVSKCFPHIVDTKILLSTNLMFQEKMKRSRKSLASAFTSFCPQIAAGSRSTDLGSLSHVKVNVEVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLHDSSKPLALNEKLQKYVNRLYLSWMHRDIIDLNTGNKVADSSLRSLTKR-YPKIMFENIVIIWGFSSKLKANEIRECISKVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSGGAISVLHPLSKLLEGGNTCGANYDTYREICGSSLSEGLFADQAEAVGIKWKTKLTEYKVASRGKEHENP-----SVQDNVNTVMKNVERTKPNTIDQLGNAPSCGQV 661 HSP 2 Score: 299.286 bits (765), Expect = 4.850e-85 Identity = 152/262 (58.02%), Postives = 184/262 (70.23%), Query Frame = 3 Query: 126 LSRALSRAFSDTPSPT-----FPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRM 896 LSRA +RA + T FP K VT +NFE +L ELR HVR +DFVAID+EMTGVTSAPWRE EFDR D+RYLKV+DSA KFAV+QFGVCPFRWD SF+A+PHNF+VF RQ++ EFLCQTTSMDFLAKYQFDFNACIHEGISYLSR QE +A + L S D L++ D+PL+ AD+LFT RMK + EWRD L Q + Q + + +D +F+ FF+M PAL L+ FTSHQL LI++ Sbjct: 11 LSRAFARALGSATTATQCGVAFPSKTVTTANFEPSLAELRRHVRTSDFVAIDLEMTGVTSAPWRELLEFDRSDVRYLKVRDSATKFAVVQFGVCPFRWDPSNHSFVAYPHNFYVFPRQQLAGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQERKALRSLNSTY-DSEWSDIGKLKDVRDIPLLSAADILFTARMKNKFSEWRDGLFQEQNQEDQIQGISND--SKFQVTFFEMHPALRLNRFTSHQLKLIQL 269
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Match: K7MQH1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 431.795 bits (1109), Expect = 3.889e-134 Identity = 225/398 (56.53%), Postives = 287/398 (72.11%), Query Frame = 1 Query: 1429 EEVKTDHQRRAEMKINAAVGFRHVIDLLSSENKLIVGHNCILDIAHVHSKFLAPLPSTAEEFVSCVNKYFPSIIDTKILLNADYTLQRKMKRXXXXXXXXXXXXCPEIAHGFTRNVLSYEPCVKVEVHVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQACSHLGIDFQLHSPSENLTQNEKLQKHMNLLYLSWINGDIIDLRTGNRSAELSGSNMIRKPYRKILFKNILLLWGFPSKLKPSMIRDCICKTLGPTSVICTYGIDQTAVFVQFSKAELVSDFLNLKETLEQSNDAISHLHPLSQLLEGGNTRAASYETYKEICASPISKVLFADQAEAVGIKWKTELLP---SDKEESHDNTRSHLESAMDSPQAVEKSKSRNTEDVVNDSSNKRFCDDI 2613 ++VK ++ R EMKI AAVGFRHVIDLLSSE KLIVG+NC LDIAHV+SKF+ PLP T EEFV+ V+K FP I+DTKILL+ + Q KMKRS SL+SAF+ CP+IA G L VKV V VD+ RS +W+ G KHEAGYDAFMTGC+FAQ CS LGIDF+LH S+ L NEKLQK++N LYLSW++ DIIDL TGN+ A+ S ++ ++ Y KI+F+NI+++WGF SKLK + IR+CI K GPTSV+ + +D TA FVQFSK ELVSDFL +K++LE+S AIS LHPLS+LLEGGNT A+Y+TY+EIC S +S+ LFADQAEAVGIKWKT+L + + + H+N S D+ V K+ R + ++ N C + Sbjct: 308 KKVKEENHRAEEMKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGTPEEFVASVSKCFPHIVDTKILLSTNLMFQEKMKRSRKSLASAFTSFCPQIAAGSRSTDLGSLSHVKVNVEVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLHDSSKPLALNEKLQKYVNRLYLSWMHRDIIDLNTGNKVADSSLRSLTKR-YPKIMFENIVIIWGFSSKLKANEIRECISKVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSGGAISVLHPLSKLLEGGNTCGANYDTYREICGSSLSEGLFADQAEAVGIKWKTKLTEYKVASRGKEHENP-----SVQDNVNTVMKNVERTKPNTIDQLGNAPSCGQV 699 HSP 2 Score: 334.724 bits (857), Expect = 1.303e-97 Identity = 173/302 (57.28%), Postives = 214/302 (70.86%), Query Frame = 3 Query: 126 LSRALSRAFSDTPSPT-----FPLKHVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVLQFGVCPFRWDSLKQSFIAHPHNFFVFARQEIPLDRTSYEFLCQTTSMDFLAKYQFDFNACIHEGISYLSRGQEDEARKRLISPKGDQLIHPSHNLRETTDLPLVRVADVLFTERMKKRLGEWRDDLLQNRVGGPQEEKVPDDLNQQFRTVFFKMRPALSLDGFTSHQLSLIRMVTRKHFKDLTYVCFNGE-STSEELVVYTDSESDKARLMVR 1013 LSRA +RA + T FP K VT +NFE +L ELR HVR +DFVAID+EMTGVTSAPWRE EFDR D+RYLKV+DSA KFAV+QFGVCPFRWD SF+A+PHNF+VF RQ++ EFLCQTTSMDFLAKYQFDFNACIHEGISYLSR QE +A + L S D L++ D+PL+ AD+LFT RMK + EWRD L Q + Q + + +D +F+ FF+M PAL L+ FTSHQL LI+++ RKHFKDL+YV N E S S++LVVYTD + D+ L+++ Sbjct: 11 LSRAFARALGSATTATQCGVAFPSKTVTTANFEPSLAELRRHVRTSDFVAIDLEMTGVTSAPWRELLEFDRSDVRYLKVRDSATKFAVVQFGVCPFRWDPSNHSFVAYPHNFYVFPRQQLAGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQERKALRSLNSTY-DSEWSDIGKLKDVRDIPLLSAADILFTARMKNKFSEWRDGLFQEQNQEDQIQGISND--SKFQVTFFEMHPALRLNRFTSHQLKLIQLLIRKHFKDLSYVSVNSEASGSQQLVVYTDLK-DELNLLLK 308 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 11
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BLAST of g.barbadense_cottongen_reftransV1_0098020 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098020 ID=g.barbadense_cottongen_reftransV1_0098020; Name=g.barbadense_cottongen_reftransV1_0098020; organism=Gossypium barbadense; type=contig; length=2872bpback to top |