g.barbadense_cottongen_reftransV1_0097969, g.barbadense_cottongen_reftransV1_0097969 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0097969
Unique Name	g.barbadense_cottongen_reftransV1_0097969
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	3062

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Dt09	chromosome	g.barbadense_cottongen_reftransV1_0097969:1..3062 . Dt09:38623283..38629146 +		n/a

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_PICGU (NADH-cytochrome b5 reductase 1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.159e-54
Identity = 68/138 (49.28%), Postives = 92/138 (66.67%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            +KK    L P+ F++F L+++T+LS+N   ++F LP  T  LGLPIGQH+S  G   NG +VV+ YTP + D +LGYF+L+IK Y QG +S H      GD++ V+GPKG F Y P  V   GM+AGGTGI PM+QV 
Sbjct:   31 NKKNGPVLKPDVFQKFPLIEKTRLSHNTCIYRFGLPKSTDRLGLPIGQHISI-GATINGKEVVRSYTPISRDDELGYFDLLIKTYEQGNISRHVDSKSVGDHIEVRGPKGFFTYTPNMVEHLGMIAGGTGIAPMYQVL 167

HSP 2 Score: 94.3597 bits (233), Expect = 4.159e-54
Identity = 53/104 (50.96%), Postives = 68/104 (65.38%), Query Frame = 2

Query:  758 EVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            +V  AIL NP DKT I L+YANV  EDILL+ ELD     +P+R  V+YVLN  PE W+G VGF++ E+++ H P   +D  +L CGPPPM  AM  +   LGY
Sbjct:  165 QVLTAILTNPDDKTKISLVYANVTEEDILLRAELDLFAKEHPDRFKVHYVLNNAPENWNGSVGFVTPEIMEKHLPNKDQDGYLLLCGPPPMISAMKKNAVTLGY 268

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPNC (NADH-cytochrome b5 reductase 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 9.754e-54
Identity = 64/138 (46.38%), Postives = 93/138 (67.39%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            S KP+  L+P +F+ F L ++  +S+NV  ++FALP PT +LGLPIGQH+S       G +VV+ YTP + D++ GYF+L++K YPQG +S +   ++ G  + V+GPKG   Y P   R  GM+AGGTGITPM+Q+ 
Sbjct:   48 SNKPRKVLNPGDFQHFTLKEKNDISHNVTVYRFALPRPTDILGLPIGQHISL-AATIGGKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLEVGQTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMYQII 184

HSP 2 Score: 92.4337 bits (228), Expect = 9.754e-54
Identity = 50/109 (45.87%), Postives = 71/109 (65.14%), Query Frame = 2

Query:  758 EVARAILEN-PK----DKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++ +AI+ N P+    D T + LI+ANV   D +L ++  E  ++  +   +YYVLN PPEGW GGVGF++ +MI+   PAP+ DIK+L CGPPPM  AM    E+LGY
Sbjct:  182 QIIKAIIRNRPRNGGNDTTQVDLIFANVN-PDDILMKDELEQLAKEDDGFRIYYVLNNPPEGWTGGVGFVTPDMIKERLPAPSSDIKVLLCGPPPMVSAMKKATESLGY 289

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_PICST (NADH-cytochrome b5 reductase 1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=CBR1 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 9.762e-54
Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            SKK    L P+ F++F L+++T++S+N + ++F LP  T  LGLPIGQH+S  G    G +VV+ YTP + D +LGYF+L+IK Y  G +S H    + G+Y+ ++GPKG F Y P  V++FGM+AGGTGI PM+Q+ 
Sbjct:   31 SKKNTPVLKPDTFQKFPLIEKTRVSHNSSVYRFGLPKSTDRLGLPIGQHISI-GATIGGKEVVRSYTPISTDDELGYFDLLIKTYENGNISKHVDSKKVGEYVEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQII 167

HSP 2 Score: 92.4337 bits (228), Expect = 9.762e-54
Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 2

Query:  758 EVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++  AIL NP DKT I LIYANV   DILLK ELD+    +P+  SV+YVLN+ PE W G VGF++ E+I    P  ++D  +L CGPPPM  AM      LG+
Sbjct:  165 QIITAILRNPADKTKISLIYANVTESDILLKSELDKWAEEHPDNFSVHYVLNEAPENWKGSVGFVTPEIIDSKLPKASDDSNLLLCGPPPMISAMKKAAVGLGF 268

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_LODEL (NADH-cytochrome b5 reductase 1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.985e-53
Identity = 61/132 (46.21%), Postives = 90/132 (68.18%), Query Frame = 1

Query:  247 CLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
             L P++F++F L+ +TQ+S+N A ++F LP PT  L LPIGQH+S  G   +G +VV+ YTP +L    G+F+L+IK Y  G +S H  E Q GD++ ++GPKG F Y P   ++ G++AGGTGI PM+Q+ 
Sbjct:   53 ALIPDKFQKFPLISKTQVSHNSAIYRFGLPNPTDTLNLPIGQHISI-GTIIDGKEVVRSYTPISLGDQQGHFDLLIKTYENGNISRHVAEKQVGDFVEIRGPKGFFTYTPNMKKSLGLIAGGTGIAPMYQII 183

HSP 2 Score: 96.6709 bits (239), Expect = 2.985e-53
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 2

Query:  758 EVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++  AI+ NP+DKT +HL+YANV   DILL++EL++    +P+R+ +++VLN+ PEGW    GF++ E+I  H P P+ D  +L CGPPPM  AM     +LG+
Sbjct:  181 QIITAIMNNPEDKTKVHLLYANVTENDILLRDELEQYAKEHPDRLKIHHVLNEAPEGWQHLTGFVTPELIDKHLPKPSADTNLLLCGPPPMISAMKKAAVSLGF 284

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_MAGO7 (NADH-cytochrome b5 reductase 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.199e-53
Identity = 70/139 (50.36%), Postives = 95/139 (68.35%), Query Frame = 1

Query:  235 KPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGK----DQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQV 639
            KPK  LDP +F+EF+L ++T +S+NVA ++  LP+P+S+LGLPIGQH+S        D +  +VV+ YTP + D   GY +L+IK YP G +S +   +  G  + V+GPKG F YQP  VR FGM+AGGTGITPM QV
Sbjct:   52 KPKKVLDPTKFQEFELKEKTIISHNVAIYRIQLPSPSSILGLPIGQHISIGADIPQPDGSSKEVVRSYTPISGDEQPGYVDLLIKSYPTGNISKYMAGLSVGQSIRVRGPKGAFVYQPNMVRHFGMIAGGTGITPMLQV 190

HSP 2 Score: 88.1965 bits (217), Expect = 5.199e-53
Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 2

Query:  752 VIEVARAILEN--PKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            +++V RAI+      D T + LI+ANV  EDILLKE+LD L +       V+YVL++PPEGW GGVGF++++MI    P PA+D+KIL CGPPPM   +    EALG+
Sbjct:  187 MLQVVRAIVRGRAAGDTTQVDLIFANVTKEDILLKEDLDALAAE-DKGFRVHYVLDRPPEGWTGGVGFVTQDMITKWLPKPADDVKILLCGPPPMVSGLKKATEALGF 293

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: K4AYM1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g088310.2 PE=4 SV=1)

HSP 1 Score: 600.127 bits (1546), Expect = 0.000e+0
Identity = 290/381 (76.12%), Postives = 337/381 (88.45%), Query Frame = -1

Query: 1437 IETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAA 2579
            IETFLFERSP+TAKPCGGAIPLCM+DEFSIP +LIDR V++M+I+SPSNL VDFG K+L+ HE I MLRREVLD+FLR RAES+GA L+ +LVT+L +P SSL PY+IH+T++N +  LAVD I+GADGANS+VAK IKAGNYT AIAFQERI+LP++KM YY+NLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVC K +IK +Q  I+ R K+KI+GGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGR+CGE IV+ASEGG+ MI+EDDLKREYL +WD KY +TF+FLD+LQ+VFYG+N AREALVE+ G EYVQRMTFDSYLYKKLA G+RWED KM   T  SL+RC I+GR++ A
Sbjct:   63 IETFLFERSPATAKPCGGAIPLCMLDEFSIPLNLIDRRVSQMRIVSPSNLVVDFG-KTLKPHEFIAMLRREVLDSFLRQRAESSGANLLKALVTNLVVPTSSLEPYVIHYTMDNCQHQLAVDAIIGADGANSRVAKSIKAGNYTTAIAFQERIKLPEDKMGYYENLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSKSNIKSFQHAIRARAKSKIEGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRICGEAIVKASEGGDSMINEDDLKREYLRKWDDKYFTTFKFLDVLQKVFYGNNAAREALVELCGDEYVQRMTFDSYLYKKLASGNRWEDAKMAMNTISSLVRCNIMGREVEA 442

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A022RDX6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a026544mg PE=4 SV=1)

HSP 1 Score: 584.334 bits (1505), Expect = 0.000e+0
Identity = 319/450 (70.89%), Postives = 367/450 (81.56%), Query Frame = -1

Query: 1443 MAASQL---QNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDM 2783
            MAA  L    +PL + +     K  KP  +K R  T +          LR AVIGGGPAGSSAAEALA+GGIET++FERSP  AKPCGGAIPLCM+DEFSIP HLIDR VT+MKIISPSNLTVDFG K+LR +E I M+RREVLD FLR RAE  GA LI +LVT++E+P S  SPYIIH+  NN++ TLAVDVI+GADGANSKVAK IKAG+YTCAIAFQERI+LP++KM+YY+NLAEMYVG+D SPDFY WVFPKCDHVAVGTGTVC KQ+IK +Q  I+ RVK+KI+GGK+IKVEAHPIPEHPRP+RVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASE G  MI E DL+REYL +WD +Y  TF+FLD+LQ+VFYGSN  REALVE+ G EYVQRMTFDSYLYK+LAK +  ED KM   T GSL+R  +VGR++
Sbjct:    1 MAAHTLTPVHHPLHSLTQTFKSKTFKPQTVKCRSATTTITS------NLRAAVIGGGPAGSSAAEALATGGIETYIFERSPQAAKPCGGAIPLCMLDEFSIPSHLIDRKVTQMKIISPSNLTVDFG-KTLRPNEFISMVRREVLDNFLRLRAEERGATLIKALVTNIELPLSEKSPYIIHYISNNTQNTLAVDVIIGADGANSKVAKSIKAGDYTCAIAFQERIKLPEDKMKYYENLAEMYVGDDASPDFYGWVFPKCDHVAVGTGTVCSKQNIKQFQGAIRNRVKSKIEGGKIIKVEAHPIPEHPRPIRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASENGRKMIGEGDLRREYLRKWDDEYFCTFKFLDVLQKVFYGSNAGREALVELCGKEYVQRMTFDSYLYKRLAKRNPLEDAKMAVDTIGSLIRSGVVGREV 443

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: W9QUY5_9ROSA (Geranylgeranyl diphosphate reductase OS=Morus notabilis GN=L484_022548 PE=4 SV=1)

HSP 1 Score: 584.334 bits (1505), Expect = 0.000e+0
Identity = 312/414 (75.36%), Postives = 356/414 (85.99%), Query Frame = -1

Query: 1431 LNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNS---RKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFN 2663
            ++GRKLR AVIGGGPAGSSAAEALA+GG+ETFLFER+PS AKPCGGAIPLCM+DEF IP HLIDR V++M+I SPSNL VDFG K+L  HE I MLRREVLD+FLR+RAES+GA LI SLVT LEIP S+ SPY+IH+   +    ++ +AVDV+VGADGANS+VAK I AG+Y  AIAFQERI+LPDEKM+YY++LAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTV  K+DIK YQ+ I++R   KI GGKVIKVEAHPIPEHPR VRV+GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGG  MI E DL+REYL EWD KYV+TF+ LDLLQ VFYGSN AREALVE+   EYVQRM+F+SYLYKK+A+G+RW+D KM+F T GSL+RCKIVGR     N
Sbjct:   14 ISGRKLRAAVIGGGPAGSSAAEALAAGGVETFLFERAPSGAKPCGGAIPLCMLDEFQIPSHLIDRRVSRMRIFSPSNLEVDFG-KTLLPHEFIAMLRREVLDSFLRSRAESSGATLITSLVTDLEIPESNNSPYVIHYIAGDRSGRKEKIAVDVVVGADGANSRVAKAIGAGDYAYAIAFQERIKLPDEKMKYYEDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVRAKRDIKSYQRAIRERAGPKISGGKVIKVEAHPIPEHPRAVRVQGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGTRMIGEGDLRREYLKEWDGKYVATFKVLDLLQSVFYGSNAAREALVELCDDEYVQRMSFESYLYKKIAEGNRWKDAKMLFDTVGSLIRCKIVGRKREVLN 426

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A059DA45_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_B03789 PE=4 SV=1)

HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0
Identity = 301/405 (74.32%), Postives = 359/405 (88.64%), Query Frame = -1

Query: 1440 RKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMA 2654
            RKLR AVIGGGPAGSSAAE+LASGG+ETFLFERSPS+AKPCGGAIPLCM+DEF +PH L+DRHVT+M++ISPSN+TVDFG K+LR HE I MLRREVLD+FLR+RAES GA+LI  LVT LE+P SS SPY++H+T   S+++LAVDV+VGADGANS+VAK I AG Y+ AIAFQERIRLPDEKM+YY+NLAEMY+G+DVSPDFYAWVFPKCDHVAVGTGTV  K++IK YQ+GI++R + KI+GG+VIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIV+ASEGG  M+ E+DL+REYL +WD +YVST+R LDLL++VFYGSN  REA+VE+ G EYVQR++ +SY+YK+L +GDRWE +KM   T  +L+RCKI+  +M 
Sbjct:    1 RKLRAAVIGGGPAGSSAAESLASGGVETFLFERSPSSAKPCGGAIPLCMLDEFDLPHSLVDRHVTEMRVISPSNITVDFG-KTLRPHEFIAMLRREVLDSFLRSRAESRGAELITGLVTDLELPRSSSSPYVVHYTSGGSKRSLAVDVVVGADGANSRVAKSIGAGEYSYAIAFQERIRLPDEKMKYYENLAEMYLGDDVSPDFYAWVFPKCDHVAVGTGTVRSKREIKAYQRGIRERARPKIEGGQVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGARMVGEEDLRREYLRQWDDRYVSTYRVLDLLEKVFYGSNWGREAMVELCGGEYVQRVSLESYMYKRLVEGDRWEGVKMAASTVATLVRCKIMSGEMG 404

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: G7K2X2_MEDTR (Pyridine nucleotide-disulfide oxidoreductase OS=Medicago truncatula GN=MTR_5g087700 PE=4 SV=1)

HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0
Identity = 320/449 (71.27%), Postives = 370/449 (82.41%), Query Frame = -1

Query: 1428 LSIKKHKPCFL----KPRR----LTVSAAH---PHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSP-STAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRK-TLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2735
            L I+   P F     KP++    +T+SA++   P + GRKLR AVIGGGPAGSSAAEALASGG+ETFLFER+P ST KPCGGAIPLCM++EF IPHHLIDRHVT+M+I SPSN+ VDFG K+L+ +E I MLRREVLD+FLR+RA SAGA+ I  LVT L++P S  SPY I++T   S K +LAVDV++GADGANS+VAK I AG+YTCAIAFQERI+L DEKM+YY+NLAEMY+G+DVSPDFYAWVFPKCDHVAVGTGTV  K DIK+YQ+ I++R  +KI GGKVIKVEAHPIPEHPRP+RVRGRVALVGDAAGYVTKCSGEGIYFAA SGRMCG G+VRASEGGE MI+E DL REYL EWD KYV+TFRFLDLLQRVFYGSN +REALVE+ G EYVQRMTFDSYLYKKLA G   +D+K+   T GSL+RC  VG  M    L
Sbjct:    3 LKIQTFSPSFSVPTSKPKQHFHSITISASNSTRPSIAGRKLRAAVIGGGPAGSSAAEALASGGVETFLFERNPPSTPKPCGGAIPLCMLEEFDIPHHLIDRHVTQMRIFSPSNIAVDFG-KTLKPNEFIAMLRREVLDSFLRSRAVSAGAEHISGLVTSLDVPTSPNSPYTINYTNKTSSKNSLAVDVVIGADGANSRVAKSISAGDYTCAIAFQERIKLSDEKMKYYENLAEMYIGDDVSPDFYAWVFPKCDHVAVGTGTVRSKHDIKLYQRAIRERAMSKIDGGKVIKVEAHPIPEHPRPIRVRGRVALVGDAAGYVTKCSGEGIYFAAMSGRMCGNGVVRASEGGEKMINECDLMREYLKEWDAKYVNTFRFLDLLQRVFYGSNASREALVELCGDEYVQRMTFDSYLYKKLAHGRVCDDVKLFMNTIGSLIRCNDVGTRMKGLIL 450

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: K7KB36_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0
Identity = 319/452 (70.58%), Postives = 375/452 (82.96%), Query Frame = -1

Query: 1428 ASQLQNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSP-STAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVN-NSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2777
            A+++Q     P+  +   K KP +LK    T+ A+   ++GRKLR AVIGGGPAGSSAAEALASGG+ETFLFER+P S AKPCGGAIPLCM++EF IP+HLIDRHVT M+I SPSN+ VDFG K+L+ HE I MLRREVLD+FLR+RA +AGA  I  LVT L++PAS  +PY +H+T N +SR++LAVDV++GADGANS+VAK I AG+Y CAIAFQERI+LPDEKM YY+NLAEMYVG+DVSPDFYAWVFPKCDHVAVGTGTV  K+DIK+YQ+GI++RVK KI GGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGR+CG G+VRASEGG+ MI E DL+REYL  WD +Y +TFRFLDLLQRVFYGSN  REALVE+ G EYVQRMTF+SYLYKKLA+G   +  K+   T GSL+R K+V   M +F L
Sbjct:    2 AAKIQTSFCLPTFSIPTSKPKP-YLK--SFTIKASK-SISGRKLRAAVIGGGPAGSSAAEALASGGVETFLFERNPPSVAKPCGGAIPLCMLEEFDIPNHLIDRHVTHMRIFSPSNIAVDFG-KTLKPHEFIAMLRREVLDSFLRSRAHAAGATAISGLVTALDLPASPDAPYTVHYTANGSSRRSLAVDVVIGADGANSRVAKAIGAGDYACAIAFQERIKLPDEKMAYYENLAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTVRSKKDIKLYQRGIRERVKPKINGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRVCGNGVVRASEGGDRMIDECDLRREYLKPWDAEYANTFRFLDLLQRVFYGSNACREALVELCGDEYVQRMTFESYLYKKLARGRVLDHAKLFMNTLGSLVRSKVVQTSMESFIL 448

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: V7BAT1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G208000g PE=4 SV=1)

HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0
Identity = 314/443 (70.88%), Postives = 370/443 (83.52%), Query Frame = -1

Query: 1455 ASQLQNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSP-STAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNS-RKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIV 2777
            A+++Q     PS  +   K KP +LK    TVSA+   ++GRKLR AVIGGGPAGSSAAEALASGG+ETFLFER+P S AKPCGGAIPLCM++EF+IPHHLIDR VT+M+I SPSN+ VDFG K+L+ HE I MLRREVLD+FLR+RA SAGA  +  LVT L++PA+  +PY IH+T N S R++LAVDV++GADGANS+VA+ I AG+Y CAIAFQERI LPDEKM +Y+NLAEMYVG+DVSPDFYAWVFPKCDHVAVGTGTV  K+DIKMYQ+GI++RV  KI GGKVIKVEAHPIPEHPRP+RV+GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCG  +V+ASEGGE MI E DL+REYL  WD ++ +TFRFLDLLQRVFYGSN  REALVE+ G EYVQRMTF+SYLYKKLA G   +D K++  T GSL+R K++
Sbjct:   27 AAKIQTSFCFPSFSIPTSKPKP-YLK--SFTVSASK-SISGRKLRAAVIGGGPAGSSAAEALASGGVETFLFERNPPSVAKPCGGAIPLCMLEEFNIPHHLIDRQVTQMRIFSPSNIAVDFG-KTLKPHEFIAMLRREVLDSFLRSRAHSAGATAVTGLVTGLDLPAAPAAPYTIHYTTNGSPRRSLAVDVVIGADGANSRVARSIGAGDYACAIAFQERITLPDEKMAHYENLAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTVRSKKDIKMYQRGIRERVMPKINGGKVIKVEAHPIPEHPRPIRVKGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGNAVVKASEGGERMIDECDLRREYLKPWDTEFSTTFRFLDLLQRVFYGSNACREALVELCGDEYVQRMTFESYLYKKLAPGRPLDDAKLLINTIGSLVRSKVM 464

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: B9HQE7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s15940g PE=4 SV=2)

HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0
Identity = 289/362 (79.83%), Postives = 325/362 (89.78%), Query Frame = -1

Query: 1428 MVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPAS-SLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2510
            M+DEFSIP HLIDRHVT+MKIISPSNLTVDFGSK+L++HE IPMLRREVLD+FLR+RA+S GAQ I  LVT +E+P   S  PY+IHHT+NN +++LAVD+IVGADGANS+VAK I AGNY CAIAFQERI+LPDEKMEYY NLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGT C ++DIK+YQ+GI++RVK KIKGG+VIKVEAHPIPE PRP RVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGE IV+ASEGGE M+SE+DLKREYL EWD KYV+TFRFLDLLQRVFYGSN  REALVE+ G EYVQRMTFDSYLYKK+A GDRW+D+K+V  TFGS MRCK+VGR+M A  L
Sbjct:    1 MIDEFSIPLHLIDRHVTRMKIISPSNLTVDFGSKTLKSHEFIPMLRREVLDSFLRSRAQSNGAQFITGLVTDIEVPDFLSSKPYVIHHTINNCKRSLAVDLIVGADGANSRVAKIINAGNYRCAIAFQERIKLPDEKMEYYHNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTACARRDIKVYQRGIRERVKEKIKGGRVIKVEAHPIPEQPRPRRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGERMVSEEDLKREYLREWDNKYVNTFRFLDLLQRVFYGSNVGREALVELCGDEYVQRMTFDSYLYKKMASGDRWDDVKLVLNTFGSFMRCKVVGREMEALKL 362

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: M4CVA5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra008152 PE=4 SV=1)

HSP 1 Score: 496.508 bits (1277), Expect = 1.310e-161
Identity = 274/465 (58.92%), Postives = 340/465 (73.12%), Query Frame = -1

Query: 1428 SFQNTKMAASQLQNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHT-------VNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2801
            SF   + ++++  N +    S LS+ + +       R+T S A P+L  RKLRVAVIGGGPAG +AAE LA GGIET L ER     KPCGGAIPLCMV EF++P  +IDR VTKMK+ISPSN+ VD G ++L+ HE I M+RREVLD  LR RAE +GA +I  L   +++P +  +PY++H+T           +KT+ VD ++GADGANS+VAK I AG+Y  AIAFQERIR+PD+KM YY++LAEMYVG+DVSPDFY WVFPKCDHVAVGTGTV  K DIK +Q   + R K+KI GGK+I+VEAHPIPEHPRP R+  RVALVGDAAGYVTKCSGEGIYFAAKSGRMC E IV  S+ G+ MI E DL R+YL +WDK Y+ T+R LD+LQ+VFY SN AREA VE+ G EYVQ+MTFDSYLYK++A G   EDLK+   T GS+ R   + R++   N+
Sbjct:    8 SFTGLRQSSTEQTNFISNVPSSLSLPQRRTSL----RVTASRASPNLANRKLRVAVIGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMKMISPSNIAVDIG-RTLKEHEYIGMVRREVLDQCLRERAEKSGATVINGLFLKMDLPENWDTPYVLHYTEYDGKTGATGQKKTMEVDAVIGADGANSRVAKSIGAGDYDYAIAFQERIRIPDDKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNGKKMIDESDL-RKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCGDEYVQKMTFDSYLYKRVAPGSPLEDLKLAVNTIGSVFRANALRREIEKLNV 466

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: T1RR19_CUCME (Geranylgeranyl hydrogenase OS=Cucumis melo GN=GGPR PE=4 SV=1)

HSP 1 Score: 496.123 bits (1276), Expect = 2.137e-161
Identity = 274/432 (63.43%), Postives = 327/432 (75.69%), Query Frame = -1

Query: 1428 RRLTVSAAH--PHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSR-------KTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2696
            RR  V+AA   P + GR LRVAV+GGGPAG SAAE LA GG+ETFLFER     KPCGGAIPLCMV EF +P  LIDR VTKMK+ISPSN+ VD G ++L+ HE I M+RREVLDA+LR RA   GA +I  LV  LE+P    +PY++H+T  + +       KTL VD ++GADGANS+VAK I AG+Y  AIAFQERI++PD+KM YY+NLAEMYVG+DVSPDFY WVFPKCDHVAVGTGTV  K DIK +Q   + R K+KI GGK+I+VEAHPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIYFAAKSGRMC E IV  SE G+ M+ E DL R+YL +WDK Y  T++ LD+LQ+VFY SN AREA VE+   EYVQ+MTFDSYLYK++  G+  EDLK+   T GSL+R   + R+M   +L
Sbjct:   36 RRFYVAAAKTSPKIAGRNLRVAVVGGGPAGGSAAETLARGGVETFLFERKLDNCKPCGGAIPLCMVGEFDLPLDLIDRRVTKMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRNRAAENGANVINGLVMKLELPKDQNAPYVLHYTAYDGKVGGVGEKKTLEVDAVIGADGANSRVAKAIDAGDYDYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQIATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLAGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVEESDL-RKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALKREMEKVSL 465

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
NCB5R_PICGU	4.159e-54	49.28	NADH-cytochrome b5 reductase 1 OS=Meyerozyma guill...	[more]
NCB5R_ASPNC	9.754e-54	46.38	NADH-cytochrome b5 reductase 1 OS=Aspergillus nige...	[more]
NCB5R_PICST	9.762e-54	47.10	NADH-cytochrome b5 reductase 1 OS=Scheffersomyces ...	[more]
NCB5R_LODEL	2.985e-53	46.21	NADH-cytochrome b5 reductase 1 OS=Lodderomyces elo...	[more]
NCB5R_MAGO7	5.199e-53	50.36	NADH-cytochrome b5 reductase 1 OS=Magnaporthe oryz...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
K4AYM1_SOLLC	0.000e+0	76.12	Uncharacterized protein OS=Solanum lycopersicum GN...	[more]
A0A022RDX6_ERYGU	0.000e+0	70.89	Uncharacterized protein OS=Erythranthe guttata GN=...	[more]
W9QUY5_9ROSA	0.000e+0	75.36	Geranylgeranyl diphosphate reductase OS=Morus nota...	[more]
A0A059DA45_EUCGR	0.000e+0	74.32	Uncharacterized protein (Fragment) OS=Eucalyptus g...	[more]
G7K2X2_MEDTR	0.000e+0	71.27	Pyridine nucleotide-disulfide oxidoreductase OS=Me...	[more]
K7KB36_SOYBN	0.000e+0	70.58	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
V7BAT1_PHAVU	0.000e+0	70.88	Uncharacterized protein OS=Phaseolus vulgaris GN=P...	[more]
B9HQE7_POPTR	0.000e+0	79.83	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
M4CVA5_BRARP	1.310e-161	58.92	Uncharacterized protein OS=Brassica rapa subsp. pe...	[more]
T1RR19_CUCME	2.137e-161	63.43	Geranylgeranyl hydrogenase OS=Cucumis melo GN=GGPR...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00420	RNGMNOXGNASE	coord: 309..324 score: 44.58 coord: 188..203 score: 38.33 coord: 47..69 score: 43.91
None	No IPR available	GENE3D	3.30.9.10		coord: 203..352 e-value: 7.6E-32 score: 109.4
None	No IPR available	PANTHER	PTHR10617:SF118	SUBFAMILY NOT NAMED	coord: 33..454
None	No IPR available	PANTHER	PTHR10617	ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE	coord: 33..454
IPR011777	Geranylgeranyl reductase family	TIGRFAM	TIGR02032	TIGR02032	coord: 48..344 e-value: 2.2E-54 score: 183.1
IPR002938	FAD-binding domain	PFAM	PF01494	FAD_binding_3	coord: 46..81 e-value: 5.9E-5 score: 22.4
IPR010253	Geranylgeranyl reductase, plant/prokaryotic	TIGRFAM	TIGR02023	TIGR02023	coord: 47..439 e-value: 3.1E-141 score: 468.8
IPR016040	NAD(P)-binding domain	GENE3D	3.40.50.720		coord: 140..202 e-value: 8.1E-13 score: 48.0 coord: 45..95 e-value: 8.1E-13 score: 48.0
IPR011774	Geranylgeranyl reductase, plant/cyanobacteria	TIGRFAM	TIGR02028	TIGR02028	coord: 46..439 e-value: 5.3E-197 score: 652.3
IPR023753	FAD/NAD(P)-binding domain	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 45..209 coord: 305..416

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0097969 ID=g.barbadense_cottongen_reftransV1_0097969; Name=g.barbadense_cottongen_reftransV1_0097969; organism=Gossypium barbadense; type=contig; length=3062bp
CCAAACCAAAACTTTCAATAAAGGACGAATCTTAAACAGAACAGAACTGG
GATCTGCTATAAAATCCTTTTATAATCTTTGTCTTTTCGTAGTTCCAAAA
CATTGGGTCTGAAAAAATTTAAAAGAGAGAAAAAAATGGAGCATTTTCAA
TCGCACAGGGTAGAAATAGTAAGCATAGCTGTTGCCGTGGCTACTGTTGG
TGCTGCTACTGCTTACTATTTATATGTTTCCAAGAAACCCAAAGTTTGCT
TGGACCCGGAAGAATTCAAAGAATTCAAACTTGTAAAACGCACTCAACTC
AGTTACAATGTGGCTAAGTTTAAGTTTGCTCTTCCCACACCAACATCGGT
TTTGGGGCTTCCAATTGGACAACATATGAGTTGCAGAGGAAAAGATCAGA
ATGGCGACGATGTTGTCAAGCCATATACTCCAACAACTTTGGATTCAGAT
TTAGGGTACTTTGAACTAGTCATAAAGATGTACCCTCAAGGAAGGATGTC
CCACCACTTCCGGGAGATGCAGGAAGGTGATTACTTAGCTGTTAAGGGAC
CCAAGGGACGCTTCAAGTATCAACCTGGCCAAGTTAGAGCATTTGGTATG
CTGGCTGGGGGCACTGGCATCACCCCGATGTTCCAGGTTTTTTATTTTAG
AATCTACGAGCTCAGCTACTTCGGATGACTTTTTGTCTTCTCACCTTGCA
CAAGACTTTCTTGTTAATTTTTCATTTAATAATTGCGTAACTTTCTCATA
TGTTATTGAGGTTGCTAGAGCCATATTGGAAAACCCGAAAGACAAGACTG
ACATTCATCTTATTTATGCCAATGTCGCTTATGAGGACATTCTGTTAAAG
GAAGAGCTGGATGAGCTCACCAGTAGATATCCCAATCGTATGAGCGTGTA
CTATGTTCTGAATCAGCCTCCTGAAGGATGGGATGGTGGAGTTGGGTTCA
TATCCAAGGAAATGATTCAAGTCCACTGCCCTGCTCCTGCTGAAGATATT
AAGATATTGAGGTGTGGACCGCCTCCGATGAACAAGGCTATGGCTGCCCA
TCTTGAAGCTCTCGGGTACATTTCCGAAATGCAATTCCAGTTTTAAGTCT
CCGCTCTAACGTCATTGATGGCCAGTAATTTTATTAAATGAACTCAACAA
GTAATGCCCAAATCACCAAAAGAAACTCGGATCTTTGGTTTGTGATATGG
TTTAGACTTGAGGCTCACAGCTTTACTGCTAAAATAATCGTTGGGATGGA
GAGAACATTTCAGATTTTATGCTGTATTATTCATCACAGCTGTTTACAAG
CAAAATTTTGCTCTAAAAATATATATATATAATATGAAAGATTTCGGTAC
CGATGTTGAAATAAATTAAGGGAAGAGTATATTGTTTGAGTTAATAACAA
AATTTGCATTTATTCATGAAAAAGTTGCAAGTTGAAGGCAGCCATGTCTC
TACCAACAATCTTACATCTCATTAAACTCCCAAAAGTACCGAAAACCATC
TTAAGATCTTCCCATCTATCTCCCTTCGCTAACTTCTTATACAAGTAACT
ATCAAAAGTCATCCTTTGCACATACTCACTCCCACGAACTTCAACCAATG
CTTCCCTTGCTTCATTACTCCCATAAAACACCCTTTGCAACAAATCCAAG
AACCTAAATGTACTCACATACTTTTTGTCCCATTCCATCAAATACTCCCT
TTTCAAATCATCTTCACTTATCATCCATTCTCCACCCTCCGATGCTCTTA
CTATTCCTTCCCCACACATCCTCCCCGATTTGGCCGCAAAATAAATGCCT
TCACCTGAGCACTTCGTAACATACCCCGCCGCGTCCCCTACTAGTGCCAC
GCGTCCTCTTACTCTTACCGGTCGGGGATGTTCCGGGATTGGGTGGGCCT
CCACTTTGATCACTTTTCCGCCCTTGATCTTGTTTTTAACCCTTTGTTTG
ATCCCTTGCTGGTACATTTTAATATCCTGTTTCCCGCACACCGTCCCAGT
CCCCACTGCCACGTGGTCGCATTTGGGGAATACCCACGCGTAAAAATCGG
GTGACACGTCATTTCCCACGTACATTTCCGCGAGGTTTTGGTAATACTCC
ATTTTCTCGTCTGGTAATCTGATTCGCTCTTGGAATGCTATGGCGCACGT
GTAGTTGCCGGCTTTTATGAATTTAGCCACTTTGCTGTTGGCTCCGTCCG
CGCCGACGATCACATCGACGGCTAGGGTTTTACGGGAGTTGTTGACTGTG
TGGTGGATGATGTAGGGAGACAAGGAGGAGGCAGGGATTTCGAGATGGGT
GACGAGGGAAGGGATTAGTTGGGCGCCGGCGGATTCGGCCCGGGTGCGGA
GGAAGGCATCGAGGACCTCGCGGCGGAGCATGGGGATGGATTCGTGGGCG
CGAAGGGATTTGGATCCGAAATCGACAGTGAGATTTGAGGGGGAAATGAT
TTTCATCTTGGTGACGTGGCGGTCGATGAGGTGGTGAGGGATGGAGAATT
CATCGACCATGCAGAGAGGTATAGCGCCGCCGCAGGGTTTGGCGGTGGAA
GGGCTACGTTCGAAGAGAAACGTCTCGATTCCGCCTGAAGCTAGGGCTTC
CGCGGCGGAGGAGCCAGCTGGACCTCCACCTATCACGGCGACCCGTAGTT
TTCGGCCGTTAAGGTGGGGATGGGCAGCTGAGACAGTTAAACGCCGGGGT
TTAAGAAAACAGGGTTTATGTTTTTTGATCGAGAGCTGAGAAGATGGGGT
TTTGAGAGGGTTTTGGAGTTGGGAAGCTGCCATTTTTGTGTTTTGGAAGC
TAAACCCTAATCTTGGAGTAAAGAGAGAGAGTGTGTGAAAAAGCTTGGGA
CTTGGTTTAACTTCACATTGGTTTTAACATTAATTAGTGAGTTGTGGGGG
TTGGTGTAGTGTAGTAGATTAGTGAGGTTACTTTTTGTTTGTTTATATTA
AAAAATTACACTCTTAACAAAGTCGTTCTTGCGTTTGATGTTTGTAATAA
TAAGATGCTCTTTACTCTGGTAGTGGATGCAAAATAGCAGATAAAGCCAA
AGAAATAAAAAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR011777	Geranylgeranyl_Rdtase_fam
IPR002938	FAD-bd
IPR010253	BchP_ChlP_pln/prok
IPR016040	NAD(P)-bd_dom
IPR011774	Geranylgeranyl_Rdtase_pln/cyn
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	obsolete oxidation-reduction process
GO:0015995	chlorophyll biosynthetic process
GO:0015979	photosynthesis
GO:0051188	obsolete cofactor biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
GO:0071949	FAD binding
GO:0045550	geranylgeranyl reductase activity
GO:0016491	oxidoreductase activity

Search form

g.barbadense_cottongen_reftransV1_0097969, g.barbadense_cottongen_reftransV1_0097969 (contig) Gossypium barbadense

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