g.barbadense_cottongen_reftransV1_0097969, g.barbadense_cottongen_reftransV1_0097969 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0097969
Unique Name	g.barbadense_cottongen_reftransV1_0097969
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	3062

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Dt09	chromosome	g.barbadense_cottongen_reftransV1_0097969:1..3062 . Dt09:38623283..38629146 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_PICGU (NADH-cytochrome b5 reductase 1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.159e-54
Identity = 68/138 (49.28%), Postives = 92/138 (66.67%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            +KK    L P+ F++F L+++T+LS+N   ++F LP  T  LGLPIGQH+S  G   NG +VV+ YTP + D +LGYF+L+IK Y QG +S H      GD++ V+GPKG F Y P  V   GM+AGGTGI PM+QV 
Sbjct:   31 NKKNGPVLKPDVFQKFPLIEKTRLSHNTCIYRFGLPKSTDRLGLPIGQHISI-GATINGKEVVRSYTPISRDDELGYFDLLIKTYEQGNISRHVDSKSVGDHIEVRGPKGFFTYTPNMVEHLGMIAGGTGIAPMYQVL 167

HSP 2 Score: 94.3597 bits (233), Expect = 4.159e-54
Identity = 53/104 (50.96%), Postives = 68/104 (65.38%), Query Frame = 2

Query:  758 EVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            +V  AIL NP DKT I L+YANV  EDILL+ ELD     +P+R  V+YVLN  PE W+G VGF++ E+++ H P   +D  +L CGPPPM  AM  +   LGY
Sbjct:  165 QVLTAILTNPDDKTKISLVYANVTEEDILLRAELDLFAKEHPDRFKVHYVLNNAPENWNGSVGFVTPEIMEKHLPNKDQDGYLLLCGPPPMISAMKKNAVTLGY 268

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPNC (NADH-cytochrome b5 reductase 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 9.754e-54
Identity = 64/138 (46.38%), Postives = 93/138 (67.39%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            S KP+  L+P +F+ F L ++  +S+NV  ++FALP PT +LGLPIGQH+S       G +VV+ YTP + D++ GYF+L++K YPQG +S +   ++ G  + V+GPKG   Y P   R  GM+AGGTGITPM+Q+ 
Sbjct:   48 SNKPRKVLNPGDFQHFTLKEKNDISHNVTVYRFALPRPTDILGLPIGQHISL-AATIGGKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLEVGQTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMYQII 184

HSP 2 Score: 92.4337 bits (228), Expect = 9.754e-54
Identity = 50/109 (45.87%), Postives = 71/109 (65.14%), Query Frame = 2

Query:  758 EVARAILEN-PK----DKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++ +AI+ N P+    D T + LI+ANV   D +L ++  E  ++  +   +YYVLN PPEGW GGVGF++ +MI+   PAP+ DIK+L CGPPPM  AM    E+LGY
Sbjct:  182 QIIKAIIRNRPRNGGNDTTQVDLIFANVN-PDDILMKDELEQLAKEDDGFRIYYVLNNPPEGWTGGVGFVTPDMIKERLPAPSSDIKVLLCGPPPMVSAMKKATESLGY 289

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_PICST (NADH-cytochrome b5 reductase 1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=CBR1 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 9.762e-54
Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            SKK    L P+ F++F L+++T++S+N + ++F LP  T  LGLPIGQH+S  G    G +VV+ YTP + D +LGYF+L+IK Y  G +S H    + G+Y+ ++GPKG F Y P  V++FGM+AGGTGI PM+Q+ 
Sbjct:   31 SKKNTPVLKPDTFQKFPLIEKTRVSHNSSVYRFGLPKSTDRLGLPIGQHISI-GATIGGKEVVRSYTPISTDDELGYFDLLIKTYENGNISKHVDSKKVGEYVEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQII 167

HSP 2 Score: 92.4337 bits (228), Expect = 9.762e-54
Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 2

Query:  758 EVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++  AIL NP DKT I LIYANV   DILLK ELD+    +P+  SV+YVLN+ PE W G VGF++ E+I    P  ++D  +L CGPPPM  AM      LG+
Sbjct:  165 QIITAILRNPADKTKISLIYANVTESDILLKSELDKWAEEHPDNFSVHYVLNEAPENWKGSVGFVTPEIIDSKLPKASDDSNLLLCGPPPMISAMKKAAVGLGF 268

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_LODEL (NADH-cytochrome b5 reductase 1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.985e-53
Identity = 61/132 (46.21%), Postives = 90/132 (68.18%), Query Frame = 1

Query:  247 CLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
             L P++F++F L+ +TQ+S+N A ++F LP PT  L LPIGQH+S  G   +G +VV+ YTP +L    G+F+L+IK Y  G +S H  E Q GD++ ++GPKG F Y P   ++ G++AGGTGI PM+Q+ 
Sbjct:   53 ALIPDKFQKFPLISKTQVSHNSAIYRFGLPNPTDTLNLPIGQHISI-GTIIDGKEVVRSYTPISLGDQQGHFDLLIKTYENGNISRHVAEKQVGDFVEIRGPKGFFTYTPNMKKSLGLIAGGTGIAPMYQII 183

HSP 2 Score: 96.6709 bits (239), Expect = 2.985e-53
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 2

Query:  758 EVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++  AI+ NP+DKT +HL+YANV   DILL++EL++    +P+R+ +++VLN+ PEGW    GF++ E+I  H P P+ D  +L CGPPPM  AM     +LG+
Sbjct:  181 QIITAIMNNPEDKTKVHLLYANVTENDILLRDELEQYAKEHPDRLKIHHVLNEAPEGWQHLTGFVTPELIDKHLPKPSADTNLLLCGPPPMISAMKKAAVSLGF 284

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_MAGO7 (NADH-cytochrome b5 reductase 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.199e-53
Identity = 70/139 (50.36%), Postives = 95/139 (68.35%), Query Frame = 1

Query:  235 KPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGK----DQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQV 639
            KPK  LDP +F+EF+L ++T +S+NVA ++  LP+P+S+LGLPIGQH+S        D +  +VV+ YTP + D   GY +L+IK YP G +S +   +  G  + V+GPKG F YQP  VR FGM+AGGTGITPM QV
Sbjct:   52 KPKKVLDPTKFQEFELKEKTIISHNVAIYRIQLPSPSSILGLPIGQHISIGADIPQPDGSSKEVVRSYTPISGDEQPGYVDLLIKSYPTGNISKYMAGLSVGQSIRVRGPKGAFVYQPNMVRHFGMIAGGTGITPMLQV 190

HSP 2 Score: 88.1965 bits (217), Expect = 5.199e-53
Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 2

Query:  752 VIEVARAILEN--PKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            +++V RAI+      D T + LI+ANV  EDILLKE+LD L +       V+YVL++PPEGW GGVGF++++MI    P PA+D+KIL CGPPPM   +    EALG+
Sbjct:  187 MLQVVRAIVRGRAAGDTTQVDLIFANVTKEDILLKEDLDALAAE-DKGFRVHYVLDRPPEGWTGGVGFVTQDMITKWLPKPADDVKILLCGPPPMVSGLKKATEALGF 293

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A0D2SW59_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G119200 PE=4 SV=1)

HSP 1 Score: 862.448 bits (2227), Expect = 0.000e+0
Identity = 450/455 (98.90%), Postives = 452/455 (99.34%), Query Frame = -1

Query: 1419 MAASQLQNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNLQLF 2783
            MAASQLQNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVAVIGGGPAGSSAAEALASGGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLR RAESAGAQLIPSLVTHLEIP+SSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRVKNKIKGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMIS+DDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEV GSEYVQRMTFDSYLYKKLAKGDRWEDLKMVF TFGSLMRCKIVGRDMAAFNLQLF
Sbjct:    1 MAASQLQNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVAVIGGGPAGSSAAEALASGGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRNRAESAGAQLIPSLVTHLEIPSSSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRVKNKIKGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISDDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVCGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFATFGSLMRCKIVGRDMAAFNLQLF 455

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A061GZJ6_THECC (Pyridine nucleotide-disulfide oxidoreductase family protein OS=Theobroma cacao GN=TCM_041132 PE=4 SV=1)

HSP 1 Score: 763.451 bits (1970), Expect = 0.000e+0
Identity = 399/452 (88.27%), Postives = 419/452 (92.70%), Query Frame = -1

Query: 1428 MAASQLQNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2783
            MA SQ+QNPL TP SQLSIKKHKP F KPR LT++AAHPHL GRKLR AVIGGGPAGSSAAEALASGGIETFLFERSPSTAKPCGGAIPLCM+DEFSIP HLIDRHVTKMKIISPSN  VDFGSKSLR+HE IPMLRREVLD+FLR RA+SAGAQLIPSLVT LEIP+S  SPYIIHHT N++RKTLAVD+I+GADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVG+DVSPDFYAWVFPKCDHVAVGTGTVC KQDIK+YQ+GIK+RVKNKI GGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGE IVRAS+GGE MI EDDLKREYL EWDKKY STFRFLDLLQRVFYGSN  REALVEV G+EYVQRMTFDSYLYKKLAKGDRWEDLK+V GT GSLMRCKIVGR+M A   
Sbjct:    1 MATSQIQNPLNTPFSQLSIKKHKPWFYKPRHLTITAAHPHLPGRKLRAAVIGGGPAGSSAAEALASGGIETFLFERSPSTAKPCGGAIPLCMIDEFSIPLHLIDRHVTKMKIISPSNNAVDFGSKSLRSHEFIPMLRREVLDSFLRARAQSAGAQLIPSLVTQLEIPSSPFSPYIIHHTTNSNRKTLAVDLIIGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTVCAKQDIKLYQRGIKERVKNKINGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVRASDGGERMIGEDDLKREYLKEWDKKYASTFRFLDLLQRVFYGSNVTREALVEVCGNEYVQRMTFDSYLYKKLAKGDRWEDLKLVLGTIGSLMRCKIVGREMEAIKF 452

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A067L372_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23853 PE=4 SV=1)

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 354/439 (80.64%), Postives = 392/439 (89.29%), Query Frame = -1

Query: 1428 KPCFLKP---------RRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2717
            KP FL P         R +T+ ++   L+GRKLR AVIGGGPAGSSAAE+LA+GGIETFLFERS STAKPCGGAIPLCM+DEFSIP HLIDRHVT+MKIISPSNLTVDFGSK+L+ HESIPMLRREVLD+FLR+RA+S GAQLIP+LVTHLE+P+SS  PYIIHHT+NN+++TLAVDVI+GADGANSKVAK I AGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVG+DVSPDFYAWVFPKCDHVAVGTGTVC K DIK+YQ+GI++RV+ KI GGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGE IV+ASEGGE  + E+DLKR YL EWDKKY STFRFLDLLQRVFYGSN AREALVE+ G EYVQRMTFDSYLYKKLA GDRWED+KM   T GSL+RC+I+GR+M A  +
Sbjct:   10 KPTFLCPLNTRTNSKRRNVTIVSS---LSGRKLRAAVIGGGPAGSSAAESLAAGGIETFLFERSTSTAKPCGGAIPLCMIDEFSIPLHLIDRHVTRMKIISPSNLTVDFGSKTLKPHESIPMLRREVLDSFLRSRAQSNGAQLIPALVTHLEVPSSSTEPYIIHHTINNTKQTLAVDVIIGADGANSKVAKSINAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTVCAKPDIKLYQKGIRERVRQKINGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGEKRVKEEDLKRGYLKEWDKKYYSTFRFLDLLQRVFYGSNMAREALVELCGDEYVQRMTFDSYLYKKLANGDRWEDVKMGLNTIGSLVRCRILGREMEALKV 445

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: B9S6M0_RICCO (Geranylgeranyl hydrogenase, putative OS=Ricinus communis GN=RCOM_1110740 PE=4 SV=1)

HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0
Identity = 345/450 (76.67%), Postives = 395/450 (87.78%), Query Frame = -1

Query: 1428 SQLQNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRK-TLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2774
            S    PL TP+S       K  F KP+ L++++A   ++GRKLR AVIGGGPAGSSAAEALA+GGIETFLFERS STAKPCGGAIPLCM+DEF+IP +LIDRHVT+MKI+SPSNLTVDFGSK+L+ HESIPMLRREVLD+FLR+R +S GA LI  LV H++IP+    PYIIHH +NN+ K  LAVDV++GADGANS+VAK I AGNY+CAIAFQERIRLPD+KMEYY++LAEMYVG+DVSPDFYAWVFPKCDHVAVGTGTVC KQ+IK++Q+GI++RV++KIKGGKVIKVEAHPIPEHPRP RVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIV+ASEGGE M+SE+DLKREYL EWD KYV+TFRFLDLLQRVFYGSN  REALVE+ G EYVQRMTFDSYLYKKLA GDRWED+KMV  TFGSL+RC+IVGR+M    +
Sbjct:   12 STFLCPLYTPTS-------KSTFFKPQTLSITSA---ISGRKLRAAVIGGGPAGSSAAEALAAGGIETFLFERSTSTAKPCGGAIPLCMLDEFNIPLNLIDRHVTRMKIVSPSNLTVDFGSKTLKPHESIPMLRREVLDSFLRSRVQSKGATLIQGLVMHIDIPSLPKEPYIIHHIINNNIKGELAVDVVIGADGANSRVAKSINAGNYSCAIAFQERIRLPDDKMEYYKDLAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTVCSKQNIKVFQRGIRERVRDKIKGGKVIKVEAHPIPEHPRPTRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGEKMVSEEDLKREYLREWDNKYVNTFRFLDLLQRVFYGSNVGREALVELCGDEYVQRMTFDSYLYKKLAGGDRWEDVKMVLNTFGSLVRCRIVGREMEGLKV 451

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A068UZ88_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_77 OS=Coffea canephora GN=GSCOC_T00038973001 PE=4 SV=1)

HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 338/459 (73.64%), Postives = 387/459 (84.31%), Query Frame = -1

Query: 1413 AASQLQNPLKTPSSQLSIKKHKPCF---LKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNLQLFHE 2780
            A + L +PL + S  L  +   P F   LKP    +S+        KLR AV+GGGPAGSSAAE LA+GGIETFLFERSPSTAKPCGGAIPLCM+DEFSIP HLIDR VT+MKIISPSNL VDFG K+L+ HE I MLRREVLD FLR RAES GA LI  LVT++E+P +S S Y+IH+  NNS+K+LAVDV++GADGANSKVAK IKAG+YTCAIAFQERI+LP+EKMEYY+NLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVC K+DIKM+Q GI+ RV+ K  GG+VIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGE IV+ASEGGE MISE+DLKREYL +WD+KY++TFRFLDLLQRVFYGSN AREALVE+ G EYVQRMTF+SYLYKKLA+G+ W+D+KMV  T GSL+RC IVGR +  F+ ++  +
Sbjct:    3 AQTHLFHPLHSLSLPLKTRCKSPDFKPKLKPSTFIISS--------KLRAAVVGGGPAGSSAAETLAAGGIETFLFERSPSTAKPCGGAIPLCMLDEFSIPPHLIDRKVTRMKIISPSNLAVDFG-KTLKPHEFISMLRREVLDDFLRRRAESCGAALIKGLVTNVEVPLTSSSSYVIHYNKNNSQKSLAVDVVIGADGANSKVAKAIKAGDYTCAIAFQERIKLPEEKMEYYENLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSKKDIKMFQHGIRARVRPKTHGGQVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGERMISEEDLKREYLKKWDEKYLTTFRFLDLLQRVFYGSNAAREALVELCGDEYVQRMTFESYLYKKLARGNGWDDIKMVMNTIGSLIRCDIVGRGIEMFDKRVLAQ 452

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: U5GK20_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20660g PE=4 SV=1)

HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0
Identity = 350/456 (76.75%), Postives = 400/456 (87.72%), Query Frame = -1

Query: 1428 MAASQL-QNPLKTPSSQL-SIKKH-KPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPAS-SLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2783
            MAA  L  N L  P+  L ++K H KP   KP  LT++A    ++GRKLR AVIGGGPAGSSAAEALA+GG+ETFLFERSPSTAKPCGGAIPLCM+DEFSIP HL+DRHVT+MKIISPSNLTVDFGS++L++HE IPMLRREVLD+FLR+RA+S GA  I  LVT +E+P   S  PY+IHHT+NN +++LAVD+IVGADGANS+VAK I AGNY+CAIAFQERI+LPDEKMEYY +LAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVC +Q+IK+YQ+GI++RV+ KIKGGKVIKVEAHPIPEHPRP RVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGE IV+ASEGGE MISE+DLKREYL EWD+KYV+TFRFLDLLQ+VFYGS+  REALVE+ G EYVQRMTFDSYLYKKLA GDRW D+K+V  TFGSLMRCK++GR+M A  L
Sbjct:    1 MAALTLTHNLLFAPTPPLKTLKPHQKP---KPYNLTITATS--ISGRKLRAAVIGGGPAGSSAAEALAAGGVETFLFERSPSTAKPCGGAIPLCMIDEFSIPLHLVDRHVTRMKIISPSNLTVDFGSRTLKSHEFIPMLRREVLDSFLRSRAQSNGAHFITGLVTDIEVPDFFSSKPYVIHHTINNRKQSLAVDLIVGADGANSRVAKIIDAGNYSCAIAFQERIKLPDEKMEYYHDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCARQNIKVYQRGIRERVREKIKGGKVIKVEAHPIPEHPRPRRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGEKMISEEDLKREYLREWDRKYVNTFRFLDLLQKVFYGSDVGREALVELCGDEYVQRMTFDSYLYKKLATGDRWGDVKLVLNTFGSLMRCKVLGREMEALKL 451

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: V4U740_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015206mg PE=4 SV=1)

HSP 1 Score: 628.246 bits (1619), Expect = 0.000e+0
Identity = 333/431 (77.26%), Postives = 385/431 (89.33%), Query Frame = -1

Query: 1422 KPRR--LTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASS--LSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNLQL 2702
            KPRR  L ++A  P L GRKLR AVIGGGPAGSSAAEALA+GG+ETFLFERSPSTAKPCGGAIPLCM++EFSIP HLIDRHVT+MKIISPSNLTVDFG+K+L+  E IPMLRREVLD+FLR+RA+S GA L+ +LVT +++P+SS   +PYI+HHT++NS++TLAVDVIVGADGA+S+VAK IKAG YTCAIAFQERI+LPD+KMEYY++LAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTV  KQDIK YQ+GI++RV+ KIKGG+V+KVEAHPIPEHPR VRV GRVALVGDAAGYVTKCSGEGIYFAAKSGR+CGE IV+ASEGG+ MISE DLKREYL +WD +Y+ T+RFLDLLQRVFYGSN  REALVE+ G EYVQRMTFDSYLYKKLA+G R++D+KMV  T GS MRC IVGR+M AF  ++
Sbjct:   24 KPRRACLAITANAP-LPGRKLRAAVIGGGPAGSSAAEALAAGGVETFLFERSPSTAKPCGGAIPLCMLEEFSIPLHLIDRHVTRMKIISPSNLTVDFGAKTLKPDEYIPMLRREVLDSFLRSRAQSRGAHLLHALVTAVDLPSSSSPTAPYIVHHTIDNSKRTLAVDVIVGADGAHSRVAKSIKAGGYTCAIAFQERIKLPDDKMEYYKDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVRAKQDIKFYQRGIRERVRQKIKGGRVMKVEAHPIPEHPRGVRVSGRVALVGDAAGYVTKCSGEGIYFAAKSGRICGEAIVKASEGGDTMISESDLKREYLRKWDDEYLMTYRFLDLLQRVFYGSNVGREALVELCGDEYVQRMTFDSYLYKKLAEGSRFQDVKMVMKTIGSFMRCNIVGREMEAFKFKV 453

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: F6H9Z1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g01740 PE=4 SV=1)

HSP 1 Score: 619.387 bits (1596), Expect = 0.000e+0
Identity = 321/415 (77.35%), Postives = 372/415 (89.64%), Query Frame = -1

Query: 1428 HPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2672
            +P L+GRKLR AVIGGGPAGSSAAE LA+GGIETFLFERSP+++KPCGGAIPLCM++EFSIP  L+DR VT+MKIISPSNLTVDFG K+L+ +E I MLRREVLD+FLR RAESAGA  I +LVT L++P+S  SPY+IH+    SR +LAVDV++GADGANS+VAK IKAG+Y+CAIAFQERI+LP+EKMEYYQ+LAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVC KQ+IK+YQ+GI++RV+ KI GGKVIKVEAHPIPEHPRPVR+RGRVALVGDAAGYVTKCSGEGIYFAAKSG+MC E I++ASEGG  MISE+DL+REYL EWD KY+ T+R LDLL RVFYGSN AREALVE+ G+EYVQRMTF+SYLYK+LA+GD WED KMVF TFGSL+RCKIVGRD+ A  +
Sbjct:   53 NPPLSGRKLRAAVIGGGPAGSSAAETLAAGGIETFLFERSPASSKPCGGAIPLCMLEEFSIPPELVDRRVTRMKIISPSNLTVDFG-KTLKPNEYIAMLRREVLDSFLRRRAESAGATAITALVTSLDLPSSPASPYVIHYNAGGSRHSLAVDVVIGADGANSRVAKSIKAGDYSCAIAFQERIKLPEEKMEYYQDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSKQNIKLYQRGIRERVEPKISGGKVIKVEAHPIPEHPRPVRIRGRVALVGDAAGYVTKCSGEGIYFAAKSGKMCAEAILKASEGGLRMISEEDLRREYLKEWDGKYLVTYRLLDLLHRVFYGSNAAREALVELCGNEYVQRMTFESYLYKRLAEGDGWEDAKMVFNTFGSLIRCKIVGRDVQALRV 466

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A0A0KWS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269180 PE=4 SV=1)

HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0
Identity = 332/452 (73.45%), Postives = 380/452 (84.07%), Query Frame = -1

Query: 1449 MAASQLQNPLKTPSSQLSIK---KHKPCFLKPRRLTVSAAHPHLN----GRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGR 2783
            MAA  LQ       S LS+    KH P   +P  L ++++    N    GRKLR AVIGGGPAGSSAAEALA+GGIET+LFERSPS+AKPCGGA+PLCM++EF IP HLIDRHVT+MK ISPSNL VDFG K+L+AHE IPMLRREVLD+FLR+RA+S GA LI  LV +LE+P SS  PY++H+T  NSRK+LAVDV++GADGANS+VAK I AG+YTCAIAFQERI+LP+EKMEYY+NLAE+YVGNDVSPDFYAWVFPKCDHVAVGTGTVC KQDIK YQ+GI++R K KI GGKV+KVEAHPIPEHPR  RV GRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGE +VRASEGGE MI E DLKREYL EWD KYV TFRFLD+LQRVFYG N  REALVE+ G+EYVQRMTF+SYLYKKLA+G+R ED K+++ T GSL++C IVGR
Sbjct:    1 MAARCLQG-----FSSLSLNPTTKHTPSSRRPPSLLITSSSKSDNAPLIGRKLRAAVIGGGPAGSSAAEALAAGGIETYLFERSPSSAKPCGGALPLCMLNEFDIPAHLIDRHVTRMKFISPSNLAVDFG-KTLKAHEFIPMLRREVLDSFLRSRAQSNGANLIHGLVLNLELPTSSKEPYVVHYTAENSRKSLAVDVVIGADGANSRVAKSIDAGDYTCAIAFQERIKLPEEKMEYYENLAEVYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSKQDIKRYQRGIRERAKRKISGGKVMKVEAHPIPEHPRARRVVGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAVVRASEGGERMIGERDLKREYLREWDAKYVGTFRFLDVLQRVFYGDNAGREALVEMCGNEYVQRMTFESYLYKKLAEGNRLEDAKLMWNTIGSLIKCGIVGR 446

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: M5WHT6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019702mg PE=4 SV=1)

HSP 1 Score: 615.92 bits (1587), Expect = 0.000e+0
Identity = 320/433 (73.90%), Postives = 372/433 (85.91%), Query Frame = -1

Query: 1428 KHKPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERS-PSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2723
            KH+P  ++  +   +  +P + GRKLRVAVIG GPAGSSAAEALA+GG+ETFLFERS PS AKPCGGAIPLCM+DEF IP HLIDRHVT+M+I SPSNL VDFG K+LR  E I MLRREVLD+FLR+RA+S GA LI +LVT LE+P S+ +PY+I +  NNS+K LAVDV++GADGANS+VAK IKAG Y CAIAFQERI+L D+KMEYY++LAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVC KQDIK++Q+ I+ R  +KI GGKVIKVEAHPIPEHPRP RVRGRVALVGDAAGYVTKCSGEGIYFAAKSGR+CG+ IV+ASEGG+ MI+E+DL+REYL EWD KY++TFRFLDLLQ+VFYGS+ AREALVE+ G EYVQRMTF+SYLYKKLA G+RWED KMV  T GSLMRC I+G+ M +  L
Sbjct:   19 KHRPLTIRASKPATT--NPPIAGRKLRVAVIGAGPAGSSAAEALAAGGVETFLFERSGPSAAKPCGGAIPLCMLDEFDIPRHLIDRHVTRMRIFSPSNLAVDFG-KTLRPDEFIAMLRREVLDSFLRSRAQSCGADLISALVTDLEVPTSNDAPYVIRYISNNSQKALAVDVVIGADGANSRVAKSIKAGGYACAIAFQERIKLTDDKMEYYEDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSKQDIKVFQRAIRARANSKISGGKVIKVEAHPIPEHPRPTRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRLCGQAIVKASEGGQRMINEEDLRREYLKEWDAKYITTFRFLDLLQKVFYGSDAAREALVELCGDEYVQRMTFESYLYKKLADGNRWEDAKMVCNTIGSLMRCNILGKKMESLKL 448

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
NCB5R_PICGU	4.159e-54	49.28	NADH-cytochrome b5 reductase 1 OS=Meyerozyma guill...	[more]
NCB5R_ASPNC	9.754e-54	46.38	NADH-cytochrome b5 reductase 1 OS=Aspergillus nige...	[more]
NCB5R_PICST	9.762e-54	47.10	NADH-cytochrome b5 reductase 1 OS=Scheffersomyces ...	[more]
NCB5R_LODEL	2.985e-53	46.21	NADH-cytochrome b5 reductase 1 OS=Lodderomyces elo...	[more]
NCB5R_MAGO7	5.199e-53	50.36	NADH-cytochrome b5 reductase 1 OS=Magnaporthe oryz...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2SW59_GOSRA	0.000e+0	98.90	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GZJ6_THECC	0.000e+0	88.27	Pyridine nucleotide-disulfide oxidoreductase famil...	[more]
A0A067L372_JATCU	0.000e+0	80.64	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
B9S6M0_RICCO	0.000e+0	76.67	Geranylgeranyl hydrogenase, putative OS=Ricinus co...	[more]
A0A068UZ88_COFCA	0.000e+0	73.64	Coffea canephora DH200=94 genomic scaffold, scaffo...	[more]
U5GK20_POPTR	0.000e+0	76.75	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
V4U740_9ROSI	0.000e+0	77.26	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
F6H9Z1_VITVI	0.000e+0	77.35	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A0A0KWS5_CUCSA	0.000e+0	73.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_...	[more]
M5WHT6_PRUPE	0.000e+0	73.90	Uncharacterized protein OS=Prunus persica GN=PRUPE...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00420	RNGMNOXGNASE	coord: 309..324 score: 44.58 coord: 188..203 score: 38.33 coord: 47..69 score: 43.91
None	No IPR available	GENE3D	3.30.9.10		coord: 203..352 e-value: 7.6E-32 score: 109.4
None	No IPR available	PANTHER	PTHR10617:SF118	SUBFAMILY NOT NAMED	coord: 33..454
None	No IPR available	PANTHER	PTHR10617	ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE	coord: 33..454
IPR011777	Geranylgeranyl reductase family	TIGRFAM	TIGR02032	TIGR02032	coord: 48..344 e-value: 2.2E-54 score: 183.1
IPR002938	FAD-binding domain	PFAM	PF01494	FAD_binding_3	coord: 46..81 e-value: 5.9E-5 score: 22.4
IPR010253	Geranylgeranyl reductase, plant/prokaryotic	TIGRFAM	TIGR02023	TIGR02023	coord: 47..439 e-value: 3.1E-141 score: 468.8
IPR016040	NAD(P)-binding domain	GENE3D	3.40.50.720		coord: 140..202 e-value: 8.1E-13 score: 48.0 coord: 45..95 e-value: 8.1E-13 score: 48.0
IPR011774	Geranylgeranyl reductase, plant/cyanobacteria	TIGRFAM	TIGR02028	TIGR02028	coord: 46..439 e-value: 5.3E-197 score: 652.3
IPR023753	FAD/NAD(P)-binding domain	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 45..209 coord: 305..416

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0097969 ID=g.barbadense_cottongen_reftransV1_0097969; Name=g.barbadense_cottongen_reftransV1_0097969; organism=Gossypium barbadense; type=contig; length=3062bp
CCAAACCAAAACTTTCAATAAAGGACGAATCTTAAACAGAACAGAACTGG
GATCTGCTATAAAATCCTTTTATAATCTTTGTCTTTTCGTAGTTCCAAAA
CATTGGGTCTGAAAAAATTTAAAAGAGAGAAAAAAATGGAGCATTTTCAA
TCGCACAGGGTAGAAATAGTAAGCATAGCTGTTGCCGTGGCTACTGTTGG
TGCTGCTACTGCTTACTATTTATATGTTTCCAAGAAACCCAAAGTTTGCT
TGGACCCGGAAGAATTCAAAGAATTCAAACTTGTAAAACGCACTCAACTC
AGTTACAATGTGGCTAAGTTTAAGTTTGCTCTTCCCACACCAACATCGGT
TTTGGGGCTTCCAATTGGACAACATATGAGTTGCAGAGGAAAAGATCAGA
ATGGCGACGATGTTGTCAAGCCATATACTCCAACAACTTTGGATTCAGAT
TTAGGGTACTTTGAACTAGTCATAAAGATGTACCCTCAAGGAAGGATGTC
CCACCACTTCCGGGAGATGCAGGAAGGTGATTACTTAGCTGTTAAGGGAC
CCAAGGGACGCTTCAAGTATCAACCTGGCCAAGTTAGAGCATTTGGTATG
CTGGCTGGGGGCACTGGCATCACCCCGATGTTCCAGGTTTTTTATTTTAG
AATCTACGAGCTCAGCTACTTCGGATGACTTTTTGTCTTCTCACCTTGCA
CAAGACTTTCTTGTTAATTTTTCATTTAATAATTGCGTAACTTTCTCATA
TGTTATTGAGGTTGCTAGAGCCATATTGGAAAACCCGAAAGACAAGACTG
ACATTCATCTTATTTATGCCAATGTCGCTTATGAGGACATTCTGTTAAAG
GAAGAGCTGGATGAGCTCACCAGTAGATATCCCAATCGTATGAGCGTGTA
CTATGTTCTGAATCAGCCTCCTGAAGGATGGGATGGTGGAGTTGGGTTCA
TATCCAAGGAAATGATTCAAGTCCACTGCCCTGCTCCTGCTGAAGATATT
AAGATATTGAGGTGTGGACCGCCTCCGATGAACAAGGCTATGGCTGCCCA
TCTTGAAGCTCTCGGGTACATTTCCGAAATGCAATTCCAGTTTTAAGTCT
CCGCTCTAACGTCATTGATGGCCAGTAATTTTATTAAATGAACTCAACAA
GTAATGCCCAAATCACCAAAAGAAACTCGGATCTTTGGTTTGTGATATGG
TTTAGACTTGAGGCTCACAGCTTTACTGCTAAAATAATCGTTGGGATGGA
GAGAACATTTCAGATTTTATGCTGTATTATTCATCACAGCTGTTTACAAG
CAAAATTTTGCTCTAAAAATATATATATATAATATGAAAGATTTCGGTAC
CGATGTTGAAATAAATTAAGGGAAGAGTATATTGTTTGAGTTAATAACAA
AATTTGCATTTATTCATGAAAAAGTTGCAAGTTGAAGGCAGCCATGTCTC
TACCAACAATCTTACATCTCATTAAACTCCCAAAAGTACCGAAAACCATC
TTAAGATCTTCCCATCTATCTCCCTTCGCTAACTTCTTATACAAGTAACT
ATCAAAAGTCATCCTTTGCACATACTCACTCCCACGAACTTCAACCAATG
CTTCCCTTGCTTCATTACTCCCATAAAACACCCTTTGCAACAAATCCAAG
AACCTAAATGTACTCACATACTTTTTGTCCCATTCCATCAAATACTCCCT
TTTCAAATCATCTTCACTTATCATCCATTCTCCACCCTCCGATGCTCTTA
CTATTCCTTCCCCACACATCCTCCCCGATTTGGCCGCAAAATAAATGCCT
TCACCTGAGCACTTCGTAACATACCCCGCCGCGTCCCCTACTAGTGCCAC
GCGTCCTCTTACTCTTACCGGTCGGGGATGTTCCGGGATTGGGTGGGCCT
CCACTTTGATCACTTTTCCGCCCTTGATCTTGTTTTTAACCCTTTGTTTG
ATCCCTTGCTGGTACATTTTAATATCCTGTTTCCCGCACACCGTCCCAGT
CCCCACTGCCACGTGGTCGCATTTGGGGAATACCCACGCGTAAAAATCGG
GTGACACGTCATTTCCCACGTACATTTCCGCGAGGTTTTGGTAATACTCC
ATTTTCTCGTCTGGTAATCTGATTCGCTCTTGGAATGCTATGGCGCACGT
GTAGTTGCCGGCTTTTATGAATTTAGCCACTTTGCTGTTGGCTCCGTCCG
CGCCGACGATCACATCGACGGCTAGGGTTTTACGGGAGTTGTTGACTGTG
TGGTGGATGATGTAGGGAGACAAGGAGGAGGCAGGGATTTCGAGATGGGT
GACGAGGGAAGGGATTAGTTGGGCGCCGGCGGATTCGGCCCGGGTGCGGA
GGAAGGCATCGAGGACCTCGCGGCGGAGCATGGGGATGGATTCGTGGGCG
CGAAGGGATTTGGATCCGAAATCGACAGTGAGATTTGAGGGGGAAATGAT
TTTCATCTTGGTGACGTGGCGGTCGATGAGGTGGTGAGGGATGGAGAATT
CATCGACCATGCAGAGAGGTATAGCGCCGCCGCAGGGTTTGGCGGTGGAA
GGGCTACGTTCGAAGAGAAACGTCTCGATTCCGCCTGAAGCTAGGGCTTC
CGCGGCGGAGGAGCCAGCTGGACCTCCACCTATCACGGCGACCCGTAGTT
TTCGGCCGTTAAGGTGGGGATGGGCAGCTGAGACAGTTAAACGCCGGGGT
TTAAGAAAACAGGGTTTATGTTTTTTGATCGAGAGCTGAGAAGATGGGGT
TTTGAGAGGGTTTTGGAGTTGGGAAGCTGCCATTTTTGTGTTTTGGAAGC
TAAACCCTAATCTTGGAGTAAAGAGAGAGAGTGTGTGAAAAAGCTTGGGA
CTTGGTTTAACTTCACATTGGTTTTAACATTAATTAGTGAGTTGTGGGGG
TTGGTGTAGTGTAGTAGATTAGTGAGGTTACTTTTTGTTTGTTTATATTA
AAAAATTACACTCTTAACAAAGTCGTTCTTGCGTTTGATGTTTGTAATAA
TAAGATGCTCTTTACTCTGGTAGTGGATGCAAAATAGCAGATAAAGCCAA
AGAAATAAAAAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR011777	Geranylgeranyl_Rdtase_fam
IPR002938	FAD-bd
IPR010253	BchP_ChlP_pln/prok
IPR016040	NAD(P)-bd_dom
IPR011774	Geranylgeranyl_Rdtase_pln/cyn
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	obsolete oxidation-reduction process
GO:0015995	chlorophyll biosynthetic process
GO:0015979	photosynthesis
GO:0051188	obsolete cofactor biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
GO:0071949	FAD binding
GO:0045550	geranylgeranyl reductase activity
GO:0016491	oxidoreductase activity

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g.barbadense_cottongen_reftransV1_0097969, g.barbadense_cottongen_reftransV1_0097969 (contig) Gossypium barbadense

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