g.barbadense_cottongen_reftransV1_0097969, g.barbadense_cottongen_reftransV1_0097969 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0097969
Unique Name	g.barbadense_cottongen_reftransV1_0097969
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	3062

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Dt09	chromosome	g.barbadense_cottongen_reftransV1_0097969:1..3062 . Dt09:38623283..38629146 +		n/a

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_DEBHA (NADH-cytochrome b5 reductase 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.044e-56
Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            S+K    L P +F++F L+++T++S+N   ++F LP  T  LGLPIGQH++  G   N  +VV+ YTP + D +LGYF+L+IK Y  G +S H    + G+ + ++GPKG F Y PG V +FGM+AGGTGITPM+Q+ 
Sbjct:   31 SRKNAPVLKPNDFQKFPLIEKTRVSHNTCVYRFGLPRSTDRLGLPIGQHIAI-GATINDKEVVRSYTPISTDDELGYFDLLIKAYENGNISRHVESKKIGETIDIRGPKGFFTYTPGMVESFGMIAGGTGITPMYQIL 167

HSP 2 Score: 100.523 bits (249), Expect = 9.044e-56
Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 2

Query:  758 EVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++  AIL NP+DKT + L+YANV  +DILLKEEL+++   +P+R  +YYVLN PPE W GGVGF++ E++  H P  +E   +L CGPPPM  AM      LGY
Sbjct:  165 QILTAILRNPEDKTKVSLVYANVTEDDILLKEELNKMAREHPDRFKIYYVLNTPPENWTGGVGFVTPEIMDKHLPKASEATNLLLCGPPPMISAMKKAAVGLGY 268

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPFU (NADH-cytochrome b5 reductase 1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 9.897e-56
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1

Query:  232 KKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNG-DDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
             KP+  L+P EF+EF L ++  +S+NV  ++FALP PT +LGLPIGQH+S     +    +VV+ YTP + D++ GYF+L++K YPQG +S +   ++ GD + V+GPKG   Y P   R  GM+AGGTGITPM Q+ 
Sbjct:   51 NKPRKVLNPTEFQEFVLKEKIDVSHNVCIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQII 188

HSP 2 Score: 98.5969 bits (244), Expect = 9.897e-56
Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 2

Query:  752 VIEVARAILEN-PK----DKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++++ +A++ N P+    D T + LI+ANV  +DILLKEELD L +  P+  ++YYVLN PP+GW GGVGF++ EMI+ H PAPA D+KIL CGPPPM  AM    E+LGY
Sbjct:  184 MLQIIKAVIRNRPRNGGNDTTKLDLIFANVNPDDILLKEELDMLAAEDPD-FNIYYVLNNPPQGWTGGVGFVTPEMIKEHLPAPASDVKILLCGPPPMISAMKKATESLGY 293

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_CANAL (NADH-cytochrome b5 reductase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.053e-55
Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            SKK    L P+EF++F L+++ ++S+N A ++F LP  T  LGLPIGQH+S  G   +G +VV+ YTP + D  LG+F+L+IK Y  G +S H      G+++ ++GPKG F Y P  V++FGM+AGGTGI PM+Q+ 
Sbjct:   41 SKKHTPVLKPDEFQKFPLIEKIRVSHNSAIYRFGLPKSTDRLGLPIGQHISI-GATIDGKEVVRSYTPISTDDQLGHFDLLIKTYENGNISRHVAGKNVGEHIEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQII 177

HSP 2 Score: 101.293 bits (251), Expect = 2.053e-55
Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 2

Query:  758 EVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++  AIL+NP+DKT IHL+YANV   DILLKEELD   +R+P+R+ ++YVLN+ P  W G VGF++ E+I  H P  + D  +L CGPPPM  AM      LG+
Sbjct:  175 QIITAILKNPEDKTKIHLVYANVTESDILLKEELDNFAARHPDRLKIHYVLNEAPANWQGSVGFVTPEIIDTHLPKASNDTNLLLCGPPPMVSAMKKAAVELGF 278

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis (strain RS) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.286e-55
Identity = 69/139 (49.64%), Postives = 92/139 (66.19%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGK-DQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            S KP+  L+P EF+ F L  +T +S+NV  ++FALP PT +LGLPIGQH+S          ++V+ YTP + D D GYF+L++K YPQG +S H   ++ GD + V+GPKG   Y P  VR  GM+AGGTGITPM QV 
Sbjct:   49 SNKPRKVLNPTEFQNFVLKDKTIVSHNVCIYRFALPRPTDILGLPIGQHISLAATIPGQSKEIVRSYTPISSDDDAGYFDLLVKSYPQGNISKHLTTLRIGDKMKVRGPKGAMVYTPNMVRHIGMIAGGTGITPMLQVI 187

HSP 2 Score: 91.6633 bits (226), Expect = 2.286e-55
Identity = 51/111 (45.95%), Postives = 73/111 (65.77%), Query Frame = 2

Query:  752 VIEVARAILEN-PK----DKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            +++V +AI++  P+    D T I LI+ANV   D +L +E  +  ++  +   +YYVLN PPE W+GGVGF++ +MI+   PAPA DIK+L CGPPPM  AM    E+LGY
Sbjct:  183 MLQVIKAIIKGRPRNGGNDTTQIDLIFANVN-PDDILLKEELDQLAKEDDAFRIYYVLNNPPEKWNGGVGFVTPDMIKAKLPAPAGDIKVLICGPPPMVSAMKKATESLGY 292

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPOR (NADH-cytochrome b5 reductase 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.485e-55
Identity = 66/139 (47.48%), Postives = 95/139 (68.35%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNG-DDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            S KP+  L+P EF+ F L ++ ++S+NVA ++FALP PT +LGLPIGQH+S     +    +VV+ YTP + D++ GYF+L++K YPQG +S +   ++ GD + V+GPKG   Y P   R  GM+AGGTGITPM Q+ 
Sbjct:   33 SGKPRKVLNPTEFQNFVLKEKNEISHNVAIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDNMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQII 171

HSP 2 Score: 95.1301 bits (235), Expect = 2.485e-55
Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 2

Query:  752 VIEVARAILEN-PK----DKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++++ +AI+ N P+    D T + LI+ANV  EDILLKEEL++L  +  +   VYYVLN PPEGW GGVGF++ +MI+   PAPA+DIKI+ CGPPPM  AM    E+LGY
Sbjct:  167 MLQIIKAIIRNRPRNGGNDTTQVDLIFANVNPEDILLKEELEQLV-KEDDGFRVYYVLNNPPEGWTGGVGFVTPDMIKERLPAPAQDIKIMLCGPPPMISAMKKATESLGY 276

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_LACBS (NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) GN=MCR1.1 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.517e-55
Identity = 69/137 (50.36%), Postives = 88/137 (64.23%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQV 639
            S +PK  LDP  +KEF L K+ Q+S N A + F LP    VLGLPIGQH+S    D NG ++V+ YTP +  +  G FEL+IK Y +G +S H   ++ GD L VKGPKG FKY PG     GM+AGGTG+ PM Q+
Sbjct:   55 STRPK-PLDPSIWKEFPLQKKNQVSPNTAIYTFKLPHAEDVLGLPIGQHISVSA-DINGKNIVRSYTPISRQNARGRFELIIKTYEKGNISRHVASLKIGDTLRVKGPKGNFKYTPGLTAHLGMIAGGTGLAPMIQI 189

HSP 2 Score: 102.834 bits (255), Expect = 3.517e-55
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 2

Query:  752 VIEVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAE-DIKILRCGPPPMNKAMAAHLEALGY 1069
            +I++ RAIL+NP D+T+I LIYANV  EDILL+ ELD L   Y +R +++YVLN PP GW GGVGF++KE I+   P P E + KIL CGPPPM  AM  +LE + Y
Sbjct:  186 MIQIVRAILQNPPDRTNITLIYANVNEEDILLRAELDALAMGYESRFNLFYVLNNPPSGWTGGVGFVTKEHIKDLLPNPNESNSKILICGPPPMVTAMKKNLEEIKY 292

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_NEUCR (NADH-cytochrome b5 reductase 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.987e-55
Identity = 73/139 (52.52%), Postives = 93/139 (66.91%), Query Frame = 1

Query:  238 PKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGD----DVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            PK  L P  F+EF+L ++T +S+NVA ++F LPTP SVLGLPIGQH+S     +  D    ++V+ YTP + D   GYF+L+IK YP G +S H   +Q G  + VKGPKG F Y P  VR FGM+AGGTGITPM QV 
Sbjct:   54 PKKVLKPAVFQEFELKEKTIISHNVAIYRFKLPTPDSVLGLPIGQHISIGAAIEQPDGSTKEIVRSYTPISGDHQPGYFDLLIKSYPTGNISKHMASLQVGQTIRVKGPKGAFVYTPNMVRHFGMVAGGTGITPMLQVI 192

HSP 2 Score: 92.0485 bits (227), Expect = 7.987e-55
Identity = 53/108 (49.07%), Postives = 77/108 (71.30%), Query Frame = 2

Query:  752 VIEVARAILEN--PKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            +++V RAI+      D+T++ LI+ANV  +DILLKE+LD L ++    + V+YVL++PPEGW GGVGF+++EM++   P PA D+KIL CGPPPM   +    EALG+
Sbjct:  188 MLQVIRAIVRGRAAGDRTEVDLIFANVTAQDILLKEDLDALVAQ-DKGIRVHYVLDRPPEGWTGGVGFVTQEMVEKLLPKPASDVKILLCGPPPMISGLKKATEALGF 294

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 8.896e-55
Identity = 67/137 (48.91%), Postives = 94/137 (68.61%), Query Frame = 1

Query:  235 KPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNG-DDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            K +  L+P EF+EF L ++T +S+NV+ ++FALP PT +LGLPIGQH+S     +    +VV+ YTP + D++ GYF+L++K YPQG +S H   ++ GD + V+GPKG   Y P   R  GM+AGGTGITPM QV 
Sbjct:   52 KARKVLNPTEFQEFVLKEKTDISHNVSIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKHLTTLKVGDVMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQVI 188

HSP 2 Score: 92.0485 bits (227), Expect = 8.896e-55
Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 2

Query:  752 VIEVARAILEN-PK----DKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            +++V +AI+ N P+    D T + LI+ANV  EDILLKEELD+L +   +  ++YYVLN PP+GW GGVGF++ EMI+   PAPA D+K+L CGPPPM  AM    E+LG+
Sbjct:  184 MLQVIKAIIRNRPRNGGTDITKVDLIFANVNPEDILLKEELDKLAAEDED-FNIYYVLNNPPQGWTGGVGFVTPEMIKERLPAPASDVKVLLCGPPPMISAMKKATESLGF 293

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_EMENI (NADH-cytochrome b5 reductase 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.059e-54
Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNG-DDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQVF 642
            S KP+  L+P EF+ F L ++  +S+NV  ++FALP PT +LGLPIGQH+S     +    +VV+ YTP + D++ GYF+L++K YPQG +S +   ++ GD + V+GPKG   Y P   R  GM+AGGTGITPM Q+ 
Sbjct:   51 SSKPRKVLNPNEFQNFVLKEKNDISHNVTIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKVGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQII 189

HSP 2 Score: 93.9745 bits (232), Expect = 1.059e-54
Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = 2

Query:  752 VIEVARAILEN-PK----DKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++++ +AI+ N P+    D T + LI+ANV  +DILLK+EL++L +   +   +YYVLN PPEGW GGVGF++ +MI+   PAPA DIKIL CGPPPM  AM    E+LGY
Sbjct:  185 MLQIIKAIIRNRPRNGGNDTTQVDLIFANVNPDDILLKDELEKLAAE-DDGFRIYYVLNNPPEGWTGGVGFVTPDMIKERLPAPASDIKILLCGPPPMVSAMKKATESLGY 294

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Match: NCB5R_KLULA (NADH-cytochrome b5 reductase 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.816e-54
Identity = 72/138 (52.17%), Postives = 99/138 (71.74%), Query Frame = 1

Query:  229 SKKPKVCLDPEEFKEFKLVKRTQLSYNVAKFKFALPTPTSVLGLPIGQHMSCRGKDQNGDDVVKPYTPTTLDSD-LGYFELVIKMYPQGRMSHHFREMQEGDYLAVKGPKGRFKYQPGQVRAFGMLAGGTGITPMFQV 639
            SKK K  LD E+ +EF LV +T L++N A ++F LP  T VLGLPIGQH+S +  + NG D+++ YTPT+LDSD +G+FEL+IK Y +G +S HF ++  GD + V+GPKG + YQP      GM+AGGTGI PM+Q+
Sbjct:   27 SKKDKPVLDKEKLQEFPLVAKTVLTHNTAIYRFGLPKSTQVLGLPIGQHISVQA-NINGKDILRSYTPTSLDSDAVGHFELLIKSYEKGNISKHFAQLNIGDKIKVRGPKGFYHYQPNMNEEIGMIAGGTGIAPMYQI 163

HSP 2 Score: 87.4261 bits (215), Expect = 1.816e-54
Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 2

Query:  758 EVARAILENPKDKTDIHLIYANVAYXXXXXXXXXXXXTSRYPNRMSVYYVLNQPPEGWDGGVGFISKEMIQVHCPAPAEDIKILRCGPPPMNKAMAAHLEALGY 1069
            ++ ++I  N  DKT + L+Y N   EDILLK+ELD    R P++  VYY+L++ PE W GGVG+I+ + ++   PAPAE +++L CGPPPM  ++  +   LGY
Sbjct:  162 QIMKSIFANDSDKTKVSLVYGNQTEEDILLKKELDAFVERKPDQFKVYYLLDKAPEAWTGGVGYITVDTMKERLPAPAEGVQLLVCGPPPMVSSIKRNAVTLGY 265

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A0A0LPE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G009770 PE=4 SV=1)

HSP 1 Score: 496.123 bits (1276), Expect = 2.378e-161
Identity = 274/432 (63.43%), Postives = 328/432 (75.93%), Query Frame = -1

Query: 1428 RRLTVSAAH--PHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSRK-------TLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2696
            RR  V+AA   P + GR LRVAV+GGGPAG SAAE LA GG+ETFLFER     KPCGGAIPLCMV EF +P  LIDR VTKMK+ISPSN+ VD G ++L+ HE I M+RREVLDA+LR RA   GA +I  LV  LE+P +  +PY++H+T  + +K       TL VD ++GADGANS+VAK I AG+Y  AIAFQERI++PD+KM YY+NLAEMYVG+DVSPDFY WVFPKCDHVAVGTGTV  K DIK +Q   + R K+KI GGK+I+VEAHPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIYFAAKSGRMC E IV  SE G+ M+ E DL R+YL +WDK Y  T++ LD+LQ+VFY SN AREA VE+   EYVQ+MTFDSYLYKK+  G+  +DLK+   T GSL+R   + R+M   +L
Sbjct:   36 RRFYVAAAKTSPKIAGRNLRVAVVGGGPAGGSAAETLARGGVETFLFERKLDNCKPCGGAIPLCMVGEFDLPLDLIDRRVTKMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRDRAAENGANVINGLVMKLELPKNQNAPYVLHYTAYDGKKGGVGEKMTLEVDAVIGADGANSRVAKAIDAGDYDYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQIATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLAGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVEESDL-RKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVVPGNPLDDLKLAVNTIGSLVRANALKREMEKVSL 465

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A078EB26_BRANA (BnaA07g31590D protein OS=Brassica napus GN=BnaA07g31590D PE=4 SV=1)

HSP 1 Score: 495.352 bits (1274), Expect = 4.109e-161
Identity = 272/455 (59.78%), Postives = 334/455 (73.41%), Query Frame = -1

Query: 1428 KTPSSQLSIKKHKPCFLK------PRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHT-------VNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2753
            ++P+ Q++   H P  L         ++T S A P L  R LRVAVIGGGPAG +AAE LA GGIET L ER     KPCGGAIPLCMV EF++P  +IDR VTKMK+ISPSN+ VD G ++L+ HE I M+RREVLD +LR RAE +GA +I  L   +++P +  SPY++H+T           +KT+ VD ++GADGANS+VAK I AG+Y  AIAFQERIR+PD+KM YY++LAEMYVG+DVSPDFY WVFPKCDHVAVGTGTV  K DIK +Q   + R K+KI GGK+I+VEAHPIPEHPRP R+  RVALVGDAAGYVTKCSGEGIYFAAKSGRMC E IV  S+ G+ MI E DL R+YL +WDK Y+ T+R LD+LQ+VFY SN AREA VE+ G EYVQ+MTFDSYLYK++A G   EDLK+   T GS+ R   + R++   N+
Sbjct:   14 QSPTDQITFVSHVPSSLSRSQRRTSLKVTASRASPKLANRSLRVAVIGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMKMISPSNIAVDIG-RTLKEHEYIGMVRREVLDQYLRERAEKSGATVINGLFLKMDLPENWDSPYVLHYTEYDGKTGATGQKKTMEVDAVIGADGANSRVAKSIGAGDYDYAIAFQERIRIPDDKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNGKKMIDESDL-RKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCGDEYVQKMTFDSYLYKRVAPGSPLEDLKLAVNTIGSVFRANALRREIEKLNV 466

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: D7KS23_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476582 PE=4 SV=1)

HSP 1 Score: 495.352 bits (1274), Expect = 4.343e-161
Identity = 275/465 (59.14%), Postives = 341/465 (73.33%), Query Frame = -1

Query: 1428 SFQNTKMAASQLQNPLKTPSSQLSIKKHKPCFLKPRRLTVSAAHPHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHT-------VNNSRKTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2801
            SF   + ++++  N +    S LS+ + +       R+T S A P L+ RKLRVAVIGGGPAG +AAE LA GGIET L ER     KPCGGAIPLCMV EF++P  +IDR VTKMK+ISPSN+ VD G ++L+ HE I M+RREVLDA+LR RAE +GA +I  L   ++ P +  SPY +H+T          ++KT+ VD ++GADGANS+VAK I AG+Y  AIAFQERIR+PDEKM YY++LAEMYVG+DVSPDFY WVFPKCDHVAVGTGTV  K DIK +Q   + R K+KI GGK+I+VEAHPIPEHPRP R+  RVALVGDAAGYVTKCSGEGIYFAAKSGRMC E IV  S+ G+ MI E DL R+YL +WDK Y+ T+R LD+LQ+VFY SN AREA VE+   EYVQ+MTFDSYLYK++A G   ED+K+   T GSL+R   + R++   ++
Sbjct:    9 SFTGLRQSSTEQTNFVSHVPSSLSLPQRRSSL----RVTASRATPKLSNRKLRVAVIGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMKMISPSNIAVDIG-RTLKEHEYIGMVRREVLDAYLRERAEKSGATVINGLFLKMDHPENWDSPYTLHYTEYDGKTGATGTKKTMEVDAVIGADGANSRVAKSIDAGDYDYAIAFQERIRIPDEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNGKKMIDEGDL-RKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 467

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: M5WAG7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005324mg PE=4 SV=1)

HSP 1 Score: 494.967 bits (1273), Expect = 4.927e-161
Identity = 274/442 (61.99%), Postives = 330/442 (74.66%), Query Frame = -1

Query: 1428 KPCFLKP---RRLTVSAAH--PHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSR-------KTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDMAAFNL 2717
            KP  L P   RRL V+AA   P + GR LRVAV+GGGPAG SAAE LA GGIETFL ER     KPCGGAIPLCMV EF +P  +IDR VTKMK+ISPSN+ VD G ++L+ HE I M+RREVLD +LR RA   GA +I  L   +E P    +PY++H+T  + +       K+L VD ++GADGANS+VAK I AG+Y  AIAFQERI++PD+KM YY+NLAEMYVG+DVSPDFY WVFPKCDHVAVGTGTV  K DIK +Q   + R K+KI GGK+++VEAHPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIYFAAKSGRMC E IV  SE G+ M++E DL R+YL +WDK Y  T++ LD+LQ+VFY SN AREA VE+   EYVQ+MTFDSYLYK++  G+ WEDLK+   T GSL+R   + R+M   N+
Sbjct:   27 KPISLNPSIHRRLQVNAAKTSPKVTGRNLRVAVVGGGPAGGSAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDQYLRNRASENGATVINGLFLKMEKPGDGEAPYVLHYTEYDGKVGGAGVKKSLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKILRVEAHPIPEHPRPRRLAGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVNEADL-RKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPWEDLKLAVNTIGSLVRANALRREMEKLNV 466

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Match: A0A0A8K9V3_NICBE (Geranylgeranyl reductase OS=Nicotiana benthamiana GN=chlP PE=2 SV=1)

HSP 1 Score: 494.582 bits (1272), Expect = 7.210e-161
Identity = 270/443 (60.95%), Postives = 335/443 (75.62%), Query Frame = -1

Query: 1443 SSQLSIKKHKPCFLKPRRLTVSAAH--PHLNGRKLRVXXXXXXXXXXXXXXXXXXXGIETFLFERSPSTAKPCGGAIPLCMVDEFSIPHHLIDRHVTKMKIISPSNLTVDFGSKSLRAHESIPMLRREVLDAFLRTRAESAGAQLIPSLVTHLEIPASSLSPYIIHHTVNNSR-------KTLAVDVIVGADGANSKVAKFIKAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCGKQDIKMYQQGIKQRXXXXXXXXXXXXVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVRASEGGEWMISEDDLKREYLMEWDKKYVSTFRFLDLLQRVFYGSNEAREALVEVRGSEYVQRMTFDSYLYKKLAKGDRWEDLKMVFGTFGSLMRCKIVGRDM 2744
            ++ +++ K  P     RRL ++A+   P +NGR LRVAV+GGGPAG +AAE LA GGIETFL ER     KPCGGAIPLCMV EF +P  +IDR VTKMK+ISPSN+ VD G ++L+ HE I M+RREVLDA+LR RA  AGA ++  L   +++P  + +PY++H+T  +S+       +TL VD ++GADGANS+VAK I AG+Y  AIAFQERIR+ D+KM+YY+NLAEMYVG+DVSPDFY WVFPKCDHVAVGTGTV  K DIK +Q   + R  +KI GGK+I+VEAHPIPEHPRP R++ RVALVGDAAGYVTKCSGEGIYFAAKSGRMC E IV  SE G+ M+ E DL R+YL +WDK Y  T++ LD+LQ+VFY SN AREA VE+   EYVQ+MTFDSYLYKK+A G+  EDLK+   T GSL+R   + R+M
Sbjct:   19 NNAITLSKSLPLTQNHRRLRINASKSSPRVNGRNLRVAVVGGGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIG-QTLKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKVTNAPYVLHYTAYDSKTNGAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIRISDDKMKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKITGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSEMGKRMVDESDL-RKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVAPGNPIEDLKLAVNTIGSLVRANALRREM 459

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
NCB5R_DEBHA	9.044e-56	46.38	NADH-cytochrome b5 reductase 1 OS=Debaryomyces han...	[more]
NCB5R_ASPFU	9.897e-56	47.10	NADH-cytochrome b5 reductase 1 OS=Neosartorya fumi...	[more]
NCB5R_CANAL	2.053e-55	46.38	NADH-cytochrome b5 reductase 1 OS=Candida albicans...	[more]
NCB5R_COCIM	2.286e-55	49.64	NADH-cytochrome b5 reductase 1 OS=Coccidioides imm...	[more]
NCB5R_ASPOR	2.485e-55	47.48	NADH-cytochrome b5 reductase 1 OS=Aspergillus oryz...	[more]
NCB5R_LACBS	3.517e-55	50.36	NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor...	[more]
NCB5R_NEUCR	7.987e-55	52.52	NADH-cytochrome b5 reductase 1 OS=Neurospora crass...	[more]
NCB5R_ASPCL	8.896e-55	48.91	NADH-cytochrome b5 reductase 1 OS=Aspergillus clav...	[more]
NCB5R_EMENI	1.059e-54	46.76	NADH-cytochrome b5 reductase 1 OS=Emericella nidul...	[more]
NCB5R_KLULA	1.816e-54	52.17	NADH-cytochrome b5 reductase 1 OS=Kluyveromyces la...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0097969 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0A0LPE1_CUCSA	2.378e-161	63.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_...	[more]
A0A078EB26_BRANA	4.109e-161	59.78	BnaA07g31590D protein OS=Brassica napus GN=BnaA07g...	[more]
D7KS23_ARALL	4.343e-161	59.14	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
M5WAG7_PRUPE	4.927e-161	61.99	Uncharacterized protein OS=Prunus persica GN=PRUPE...	[more]
A0A0A8K9V3_NICBE	7.210e-161	60.95	Geranylgeranyl reductase OS=Nicotiana benthamiana ...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00420	RNGMNOXGNASE	coord: 309..324 score: 44.58 coord: 188..203 score: 38.33 coord: 47..69 score: 43.91
None	No IPR available	GENE3D	3.30.9.10		coord: 203..352 e-value: 7.6E-32 score: 109.4
None	No IPR available	PANTHER	PTHR10617:SF118	SUBFAMILY NOT NAMED	coord: 33..454
None	No IPR available	PANTHER	PTHR10617	ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE	coord: 33..454
IPR011777	Geranylgeranyl reductase family	TIGRFAM	TIGR02032	TIGR02032	coord: 48..344 e-value: 2.2E-54 score: 183.1
IPR002938	FAD-binding domain	PFAM	PF01494	FAD_binding_3	coord: 46..81 e-value: 5.9E-5 score: 22.4
IPR010253	Geranylgeranyl reductase, plant/prokaryotic	TIGRFAM	TIGR02023	TIGR02023	coord: 47..439 e-value: 3.1E-141 score: 468.8
IPR016040	NAD(P)-binding domain	GENE3D	3.40.50.720		coord: 140..202 e-value: 8.1E-13 score: 48.0 coord: 45..95 e-value: 8.1E-13 score: 48.0
IPR011774	Geranylgeranyl reductase, plant/cyanobacteria	TIGRFAM	TIGR02028	TIGR02028	coord: 46..439 e-value: 5.3E-197 score: 652.3
IPR023753	FAD/NAD(P)-binding domain	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 45..209 coord: 305..416

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0097969 ID=g.barbadense_cottongen_reftransV1_0097969; Name=g.barbadense_cottongen_reftransV1_0097969; organism=Gossypium barbadense; type=contig; length=3062bp
CCAAACCAAAACTTTCAATAAAGGACGAATCTTAAACAGAACAGAACTGG
GATCTGCTATAAAATCCTTTTATAATCTTTGTCTTTTCGTAGTTCCAAAA
CATTGGGTCTGAAAAAATTTAAAAGAGAGAAAAAAATGGAGCATTTTCAA
TCGCACAGGGTAGAAATAGTAAGCATAGCTGTTGCCGTGGCTACTGTTGG
TGCTGCTACTGCTTACTATTTATATGTTTCCAAGAAACCCAAAGTTTGCT
TGGACCCGGAAGAATTCAAAGAATTCAAACTTGTAAAACGCACTCAACTC
AGTTACAATGTGGCTAAGTTTAAGTTTGCTCTTCCCACACCAACATCGGT
TTTGGGGCTTCCAATTGGACAACATATGAGTTGCAGAGGAAAAGATCAGA
ATGGCGACGATGTTGTCAAGCCATATACTCCAACAACTTTGGATTCAGAT
TTAGGGTACTTTGAACTAGTCATAAAGATGTACCCTCAAGGAAGGATGTC
CCACCACTTCCGGGAGATGCAGGAAGGTGATTACTTAGCTGTTAAGGGAC
CCAAGGGACGCTTCAAGTATCAACCTGGCCAAGTTAGAGCATTTGGTATG
CTGGCTGGGGGCACTGGCATCACCCCGATGTTCCAGGTTTTTTATTTTAG
AATCTACGAGCTCAGCTACTTCGGATGACTTTTTGTCTTCTCACCTTGCA
CAAGACTTTCTTGTTAATTTTTCATTTAATAATTGCGTAACTTTCTCATA
TGTTATTGAGGTTGCTAGAGCCATATTGGAAAACCCGAAAGACAAGACTG
ACATTCATCTTATTTATGCCAATGTCGCTTATGAGGACATTCTGTTAAAG
GAAGAGCTGGATGAGCTCACCAGTAGATATCCCAATCGTATGAGCGTGTA
CTATGTTCTGAATCAGCCTCCTGAAGGATGGGATGGTGGAGTTGGGTTCA
TATCCAAGGAAATGATTCAAGTCCACTGCCCTGCTCCTGCTGAAGATATT
AAGATATTGAGGTGTGGACCGCCTCCGATGAACAAGGCTATGGCTGCCCA
TCTTGAAGCTCTCGGGTACATTTCCGAAATGCAATTCCAGTTTTAAGTCT
CCGCTCTAACGTCATTGATGGCCAGTAATTTTATTAAATGAACTCAACAA
GTAATGCCCAAATCACCAAAAGAAACTCGGATCTTTGGTTTGTGATATGG
TTTAGACTTGAGGCTCACAGCTTTACTGCTAAAATAATCGTTGGGATGGA
GAGAACATTTCAGATTTTATGCTGTATTATTCATCACAGCTGTTTACAAG
CAAAATTTTGCTCTAAAAATATATATATATAATATGAAAGATTTCGGTAC
CGATGTTGAAATAAATTAAGGGAAGAGTATATTGTTTGAGTTAATAACAA
AATTTGCATTTATTCATGAAAAAGTTGCAAGTTGAAGGCAGCCATGTCTC
TACCAACAATCTTACATCTCATTAAACTCCCAAAAGTACCGAAAACCATC
TTAAGATCTTCCCATCTATCTCCCTTCGCTAACTTCTTATACAAGTAACT
ATCAAAAGTCATCCTTTGCACATACTCACTCCCACGAACTTCAACCAATG
CTTCCCTTGCTTCATTACTCCCATAAAACACCCTTTGCAACAAATCCAAG
AACCTAAATGTACTCACATACTTTTTGTCCCATTCCATCAAATACTCCCT
TTTCAAATCATCTTCACTTATCATCCATTCTCCACCCTCCGATGCTCTTA
CTATTCCTTCCCCACACATCCTCCCCGATTTGGCCGCAAAATAAATGCCT
TCACCTGAGCACTTCGTAACATACCCCGCCGCGTCCCCTACTAGTGCCAC
GCGTCCTCTTACTCTTACCGGTCGGGGATGTTCCGGGATTGGGTGGGCCT
CCACTTTGATCACTTTTCCGCCCTTGATCTTGTTTTTAACCCTTTGTTTG
ATCCCTTGCTGGTACATTTTAATATCCTGTTTCCCGCACACCGTCCCAGT
CCCCACTGCCACGTGGTCGCATTTGGGGAATACCCACGCGTAAAAATCGG
GTGACACGTCATTTCCCACGTACATTTCCGCGAGGTTTTGGTAATACTCC
ATTTTCTCGTCTGGTAATCTGATTCGCTCTTGGAATGCTATGGCGCACGT
GTAGTTGCCGGCTTTTATGAATTTAGCCACTTTGCTGTTGGCTCCGTCCG
CGCCGACGATCACATCGACGGCTAGGGTTTTACGGGAGTTGTTGACTGTG
TGGTGGATGATGTAGGGAGACAAGGAGGAGGCAGGGATTTCGAGATGGGT
GACGAGGGAAGGGATTAGTTGGGCGCCGGCGGATTCGGCCCGGGTGCGGA
GGAAGGCATCGAGGACCTCGCGGCGGAGCATGGGGATGGATTCGTGGGCG
CGAAGGGATTTGGATCCGAAATCGACAGTGAGATTTGAGGGGGAAATGAT
TTTCATCTTGGTGACGTGGCGGTCGATGAGGTGGTGAGGGATGGAGAATT
CATCGACCATGCAGAGAGGTATAGCGCCGCCGCAGGGTTTGGCGGTGGAA
GGGCTACGTTCGAAGAGAAACGTCTCGATTCCGCCTGAAGCTAGGGCTTC
CGCGGCGGAGGAGCCAGCTGGACCTCCACCTATCACGGCGACCCGTAGTT
TTCGGCCGTTAAGGTGGGGATGGGCAGCTGAGACAGTTAAACGCCGGGGT
TTAAGAAAACAGGGTTTATGTTTTTTGATCGAGAGCTGAGAAGATGGGGT
TTTGAGAGGGTTTTGGAGTTGGGAAGCTGCCATTTTTGTGTTTTGGAAGC
TAAACCCTAATCTTGGAGTAAAGAGAGAGAGTGTGTGAAAAAGCTTGGGA
CTTGGTTTAACTTCACATTGGTTTTAACATTAATTAGTGAGTTGTGGGGG
TTGGTGTAGTGTAGTAGATTAGTGAGGTTACTTTTTGTTTGTTTATATTA
AAAAATTACACTCTTAACAAAGTCGTTCTTGCGTTTGATGTTTGTAATAA
TAAGATGCTCTTTACTCTGGTAGTGGATGCAAAATAGCAGATAAAGCCAA
AGAAATAAAAAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR011777	Geranylgeranyl_Rdtase_fam
IPR002938	FAD-bd
IPR010253	BchP_ChlP_pln/prok
IPR016040	NAD(P)-bd_dom
IPR011774	Geranylgeranyl_Rdtase_pln/cyn
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	obsolete oxidation-reduction process
GO:0015995	chlorophyll biosynthetic process
GO:0015979	photosynthesis
GO:0051188	obsolete cofactor biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
GO:0071949	FAD binding
GO:0045550	geranylgeranyl reductase activity
GO:0016491	oxidoreductase activity

Search form

g.barbadense_cottongen_reftransV1_0097969, g.barbadense_cottongen_reftransV1_0097969 (contig) Gossypium barbadense

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