g.barbadense_cottongen_reftransV1_0097919, g.barbadense_cottongen_reftransV1_0097919 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.352e-22 Identity = 36/81 (44.44%), Postives = 47/81 (58.02%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 E+M G+LE LH G + L+ P R IAI A L +LHH+C I+HRD+K SN+LLD ++ A VSDFG Sbjct: 962 EYMKYGSLEDVLHDRKKTG--------IKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFG 1034 HSP 2 Score: 61.2326 bits (147), Expect = 3.352e-22 Identity = 28/80 (35.00%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 1259 LPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITAC 1498 L ++ + LL+AT+GF + +L+G+G FG VY+ L ++ K++++ G + F AE ET+ +++RNLV L+ C Sbjct: 873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGD-REFTAEMETIGKIKHRNLVPLLGYC 951
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.701e-22 Identity = 75/242 (30.99%), Postives = 114/242 (47.11%), Query Frame = 3 Query: 1494 LARVLIFKEMNSKLQS---EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG*QSSSSLKPQKAAQLG*RELSVSLHQASSVGCFYHKTHITTMFIVLQVHCYMKFC**DEINIIYYFTFALLIF-LISRGTIFSFVEYGMGDMVNGSSC*KCL-QGRGVLVKYLKMEWT-SIISLR-EHCLKDYPKL*SIVWC 2198 L ++L F + K ++ FM NGNLE +H GS I SL +++++ + +AS ++YLH PIVH DLKP+NILLD D AHVSDFG A LG RE + +S F T+ + YM+ F+F +++ L+++ S + DM K + GR +V+ L ME SI+SL+ E ++D+ KL ++C Sbjct: 928 LVKILGFAWESGKTKALVLPFMENGNLEDTIH--------GSAAP--IGSLLEKIDLCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFG----------TARILGFREDGST---TASTSAFEG-----TIGYLAPEFAYMR----KVTTKADVFSFGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMELGDSIVSLKQEEAIEDFLKL--CLFC 1135 HSP 2 Score: 58.5362 bits (140), Expect = 3.701e-22 Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 2 Query: 1277 KSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGAL--KSFMAECETLSNVRYRNLVKLI 1489 K L +ATD F+S N+IG+ S +VY+G L+ +I AVKVL L A K F E +TLS +++RNLVK++ Sbjct: 861 KELEQATDSFNSANIIGSSSLSTVYKGQLEDGTVI-AVKVLNLKEFSAESDKWFYTEAKTLSQLKHRNLVKIL 932
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.763e-22 Identity = 36/81 (44.44%), Postives = 46/81 (56.79%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 E+M G+LE+ LH + G + L+ R IAI A L +LHH C I+HRD+K SN+LLD D A VSDFG Sbjct: 933 EYMKWGSLETVLHEKSSKKGG------IYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFG 1007 HSP 2 Score: 62.003 bits (149), Expect = 3.763e-22 Identity = 32/99 (32.32%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 1202 RVKSEPAVALASSSTNKDLLPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITAC 1498 ++ S P + +T + L ++ + LL+AT+GFS+ ++G+G FG VY+ L ++ K++ + G + FMAE ET+ +++RNLV L+ C Sbjct: 825 KLSSVPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGD-REFMAEMETIGKIKHRNLVPLLGYC 922
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.355e-22 Identity = 36/81 (44.44%), Postives = 47/81 (58.02%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 E+M G+LE LH G + L+ P R IAI A L +LHH+C I+HRD+K SN+LLD ++ A VSDFG Sbjct: 962 EYMKYGSLEDVLHDRKKIG--------IKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFG 1034 HSP 2 Score: 60.8474 bits (146), Expect = 5.355e-22 Identity = 28/80 (35.00%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 1259 LPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITAC 1498 L ++ + LL+AT+GF + +L+G+G FG VY+ L ++ K++++ G + F AE ET+ +++RNLV L+ C Sbjct: 873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGD-REFTAEMETIGKIKHRNLVPLLGYC 951
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.164e-22 Identity = 39/81 (48.15%), Postives = 46/81 (56.79%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFM G+LE LH P G IL +R IA A L +LHH+C I+HRD+K SN+LLD DM A VSDFG Sbjct: 912 EFMQYGSLEEVLHG-PRTG-----EKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFG 986 HSP 2 Score: 60.8474 bits (146), Expect = 6.164e-22 Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 1274 YKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITAC 1498 + L++AT+GFS+ ++IG G FG V++ L + K++ L G + FMAE ETL +++RNLV L+ C Sbjct: 828 FSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGD-REFMAEMETLGKIKHRNLVPLLGYC 901
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: A0A061ERI2_THECC (LRR receptor-like serine/threonine-protein kinase, putative OS=Theobroma cacao GN=TCM_021718 PE=4 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.201e-91 Identity = 101/158 (63.92%), Postives = 126/158 (79.75%), Query Frame = 2 Query: 1091 ESKKVSKTQAYDWITLWTCGTCGTQAKMSLLVVNLLKRVKSEPAVALASSSTNKDLLPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKAPV*VHA*WEF 1564 SKK + ++ + ++ + + G +SLL+VN L+++K EPA+ LAS+S K+LLP+V Y+SL KATDGFSS NLIGAGSFGSVY+GILDQ+E IVAVKVLYLH+ GALKSFMAECETL N+R+RNLVKL+TACSSVDFQGNEFKA V +EF Sbjct: 657 NSKKGTLSRRHKFMIAFLSASVGLVLIVSLLIVNRLRKLKREPALPLASASVKKELLPRVSYESLQKATDGFSSENLIGAGSFGSVYKGILDQNENIVAVKVLYLHQPGALKSFMAECETLRNIRHRNLVKLLTACSSVDFQGNEFKALV-----YEF 809 HSP 2 Score: 151.754 bits (382), Expect = 2.201e-91 Identity = 72/81 (88.89%), Postives = 74/81 (91.36%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFMPNG+LESWLHPVPNAGG+G E DL ILSL QR NIAIDVA ALEYLHHHCQKPIVHRDLKPSNILLD DMTAHVSDFG Sbjct: 808 EFMPNGSLESWLHPVPNAGGDGMEDDLRILSLTQRANIAIDVACALEYLHHHCQKPIVHRDLKPSNILLDNDMTAHVSDFG 888 HSP 3 Score: 36.5798 bits (83), Expect = 2.201e-91 Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 2 Query: 1778 FRLAKFIKLEATE------SSSAGLKGTLGFAAP 1861 F LAKF+ LEA E SSSAGLKGT+G+AAP Sbjct: 887 FGLAKFL-LEAMERSQTNQSSSAGLKGTVGYAAP 919 HSP 4 Score: 78.9518 bits (193), Expect = 5.034e-25 Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 1 Query: 2251 CILVDIKKDQIQDSLKELLKIGVACFREQPRERMKLSDIIKELQLVLRLLIGS 2409 CILV+ KKD +Q+SL E+LKIGVAC EQPRERMKL D+IKELQLV LL+GS Sbjct: 997 CILVETKKDLLQNSLTEILKIGVACSLEQPRERMKLGDVIKELQLVRGLLLGS 1049 HSP 5 Score: 65.4698 bits (158), Expect = 5.034e-25 Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 2 Query: 2054 YG*WFLLLEMFTGKRGTGEIFKDGMDLHNFVKRALPERLSQIV 2182 Y LLLEMFTGKR T E FKDG+DLHNFVK ALPER+ +++ Sbjct: 934 YSYGILLLEMFTGKRPTDETFKDGLDLHNFVKTALPERILEVL 976
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: B9HCL8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s10000g PE=4 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.136e-83 Identity = 77/123 (62.60%), Postives = 100/123 (81.30%), Query Frame = 2 Query: 1172 MSLLVVNLLKRVKSEPAVALASSSTNKDLLPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKAPV 1540 MS+LV+N L++ K+ + +S S+ ++LL +V Y++L KAT GFSS NLIGAGSFGSVYRGILD +E +VAVKVL++ + LKSFMAECE L N+R+RNLVK++TACSSVDFQGN+FKA V Sbjct: 669 MSILVINRLRK-KNRQSSLASSLSSKQELLLKVSYRNLHKATAGFSSANLIGAGSFGSVYRGILDPNETVVAVKVLFMRQRKTLKSFMAECEILKNIRHRNLVKILTACSSVDFQGNDFKALV 790 HSP 2 Score: 118.242 bits (295), Expect = 1.136e-83 Identity = 58/81 (71.60%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFMPNG LESWLH P NG DL ILS QRLNIAIDVA+AL YLH+ C KP+VH DLKPSN+LLD DMTAHV DFG Sbjct: 792 EFMPNGTLESWLHSFPRT--NGINEDLKILSFHQRLNIAIDVAAALNYLHYQCHKPVVHCDLKPSNVLLDNDMTAHVGDFG 870 HSP 3 Score: 65.855 bits (159), Expect = 1.136e-83 Identity = 50/141 (35.46%), Postives = 66/141 (46.81%), Query Frame = 2 Query: 1778 FRLAKFIKLEA------TESSSAGLKGTLGFAAPGIIRWLFLP*NTYNNNVYCFTGTLLHEILLVR*D*YYLLFYFCIAYLSNIQRYHF*FCRVWHGRYG*WFLLLEMFTGKRGTGEIFKDGMDLHNFVKRALPERLSQIV 2182 F LA+FI+ EA ESSS GLKGT+G+AAP + + N +VY + G LL LEMFTGKR T ++F DG+DLHNFVK ALP+++S++V Sbjct: 869 FGLARFIE-EAINPSHRNESSSVGLKGTVGYAAP---EYGMGSKPSMNGDVYSY-GILL----------------------------------------------LEMFTGKRPTDDMFHDGLDLHNFVKTALPDQISEVV 958 HSP 4 Score: 49.6766 bits (117), Expect = 1.136e-83 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 1 Query: 2266 IKKDQIQDSLKELLKIGVACFREQPRERMKLSDIIKELQLVLRLLIGSA 2412 IKKDQ+Q+SL +L+IG+AC E ER + D++ ELQ V R +GS Sbjct: 984 IKKDQMQESLIAILRIGIACSVESINERKNVKDVLTELQNVRRFFLGSG 1032
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: A0A067DJP5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0356912mg PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.688e-68 Identity = 92/160 (57.50%), Postives = 114/160 (71.25%), Query Frame = 2 Query: 1085 PKESKKVSKTQAYDWITLWTCGTCGTQAKMSLLVVNLLKRVKSEPAVALASSSTNKDLLPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKAPV*VHA*WEF 1564 P ESKK K+ + + G G MSLL+++ L+R ++ V + SS+ KDLL V Y+SLLKAT GFSS NLIG GSFGSVY+GILD + +VAVKVL+LH+ GALKSFMAECE L N+R+RNLVK+ITACSS DFQGN+FKA V +EF Sbjct: 201 PSESKKRQKSNGFKLMIPLLSGLVGLVLVMSLLIIDRLRRKRT---VTSSESSSRKDLLLNVSYESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKALV-----YEF 352 HSP 2 Score: 107.457 bits (267), Expect = 2.688e-68 Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFM +G+LESWLHP + + Y ILS QRLNIAI+VASALEYLHHHC+K IVH DLKPSN+LLD DM AHV DFG Sbjct: 351 EFMHHGSLESWLHP--ESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGDFG 429 HSP 3 Score: 31.9574 bits (71), Expect = 2.688e-68 Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 2 Query: 1778 FRLAKFIK--LEATESSSAGLKGTLGFAAP 1861 F L +FI + + + SS GLKGT+G+AAP Sbjct: 428 FGLTRFIPEVISSNQCSSVGLKGTVGYAAP 457
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: W9S300_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015582 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.506e-68 Identity = 76/131 (58.02%), Postives = 98/131 (74.81%), Query Frame = 2 Query: 1148 GTCGTQAKMSLLVVNLLKRVKSEPAVALASSSTNKDLLPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKAPV 1540 G G +S+L+V LK++K +P + SS N++ L V Y +L+KAT GFSS NLIG+GS GSVY+GILD +E +VAVKVLY GAL+SF+ ECE L N+R+RNLVK++TACSSVDFQGN+FKA V Sbjct: 625 GILGLVLLVSILIVVRLKKLKRDPPSSAVSS--NENFLLNVSYGTLVKATGGFSSANLIGSGSSGSVYKGILDPNEKVVAVKVLYTQERGALRSFLTECEALRNIRHRNLVKVLTACSSVDFQGNDFKALV 753 HSP 2 Score: 120.939 bits (302), Expect = 7.506e-68 Identity = 63/85 (74.12%), Postives = 66/85 (77.65%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYD----LLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFMPNG+LESWLHP P EYD L +LSL QRLNIAIDVASALEYLHH CQKPIVH DLKPSNILLD D+TA V DFG Sbjct: 755 EFMPNGSLESWLHPRPR------EYDVDGELRMLSLLQRLNIAIDVASALEYLHHECQKPIVHCDLKPSNILLDNDLTARVGDFG 833 HSP 3 Score: 39.2762 bits (90), Expect = 7.506e-68 Identity = 44/147 (29.93%), Postives = 61/147 (41.50%), Query Frame = 2 Query: 1778 FRLAKFI-----KLEATESSSAGLKGTLGFAAP--GIIRWLFLP*NTYNNNVYCFTGTLLHEILLVR*D*YYLLFYFCIAYLSNIQRYHF*FCRVWHGRYG*WFLLLEMFTGKRGTGEIFKDGMDLHNFVKRALPERLSQIVVHCLV 2197 F LA FI + E +SSS GLK T+G+AAP G+ + +TY +VY + G LL E+ R R T E FKDG+DLH+ VK AL ++S+++ LV Sbjct: 832 FGLATFIPEPVSRSEVQQSSSVGLKVTVGYAAPEYGMGSKV----STY-GDVYSY-GVLLLEMFTGR----------------------------------------------RPTDEKFKDGLDLHDHVKSALSRKISEVLDPMLV 926 HSP 4 Score: 22.7126 bits (47), Expect = 7.506e-68 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3 Query: 1080 SNPKKAKKSQRLKLMI 1127 + PKK K S+ LKLMI Sbjct: 605 TKPKKEKISKGLKLMI 620
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: V4SU95_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010968mg PE=4 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.005e-65 Identity = 83/131 (63.36%), Postives = 104/131 (79.39%), Query Frame = 2 Query: 1172 MSLLVVNLLKRVKSEPAVALASSSTNKDLLPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKAPV*VHA*WEF 1564 MSLL++N L++ ++ V + SS+ KDLL V Y+SLLKAT GFSS NL+GAGSFGSVY+GILD + +VAVKVL+LH+ GALKSFMAECE L N+R+RNLVK+ITACSS DF+GN+FKA V +EF Sbjct: 672 MSLLIINRLRKKRT---VTGSESSSRKDLLLNVSYESLLKATGGFSSANLVGAGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEVLRNIRHRNLVKIITACSSSDFEGNDFKALV-----YEF 794 HSP 2 Score: 105.916 bits (263), Expect = 2.005e-65 Identity = 57/81 (70.37%), Postives = 60/81 (74.07%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFM NG+LE WLHP + + Y ILSL QRLNIAIDVASALEYLH KPIVH DLKPSNILLD DMTAHV DFG Sbjct: 793 EFMHNGSLEIWLHP--ESTSDDLNYSSRILSLLQRLNIAIDVASALEYLHRQYGKPIVHCDLKPSNILLDNDMTAHVGDFG 871 HSP 3 Score: 32.3426 bits (72), Expect = 2.005e-65 Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 2 Query: 1778 FRLAKFIK--LEATESSSAGLKGTLGFAAP 1861 F L +FI + + +SSS GLKGT+G+A P Sbjct: 870 FGLTRFIPEAIRSNQSSSIGLKGTVGYAPP 899 HSP 4 Score: 60.8474 bits (146), Expect = 5.099e-17 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 2 Query: 2054 YG*WFLLLEMFTGKRGTGEIFKDGMDLHNFVKRALPERLSQIV 2182 Y LLLE FTGKR T +IF +G+DLHNFVK ALPE++S+++ Sbjct: 914 YSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVL 956 HSP 5 Score: 56.6102 bits (135), Expect = 5.099e-17 Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 2266 IKKDQIQDSLKELLKIGVACFREQPRERMKLSDIIKELQLV 2388 +K+DQ+Q+SL +LKIGVAC E PRERM +SD++ LQ V Sbjct: 975 LKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKV 1015
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: V4SPD8_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013537mg PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.300e-63 Identity = 91/160 (56.88%), Postives = 113/160 (70.62%), Query Frame = 2 Query: 1085 PKESKKVSKTQAYDWITLWTCGTCGTQAKMSLLVVNLLKRVKSEPAVALASSSTNKDLLPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKAPV*VHA*WEF 1564 P ESKK K+ + + G G MSLL+++ L+R ++ V + SS+ KDLL V Y+SLLKAT GFSS NLIG GSFGSVY+GILD + +V VKVL+LH+ GALKSFMAECE L N+R+RNLVK+ITACSS DFQGN+FKA V +EF Sbjct: 390 PSESKKRQKSNGFKLMIPLLSGLVGLVLVMSLLIIDRLRRKRT---VTSSESSSRKDLLLNVSYESLLKATRGFSSANLIGTGSFGSVYKGILDPDQTVVMVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKALV-----YEF 541 HSP 2 Score: 103.605 bits (257), Expect = 2.300e-63 Identity = 53/81 (65.43%), Postives = 61/81 (75.31%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFM +G+LESWLHP + + Y ILS QRLNIAI+VASALEYLHHHC++ IVH DLKPS +LLD DM AHV DFG Sbjct: 540 EFMHHGSLESWLHP--ESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKRQIVHCDLKPSYVLLDNDMIAHVGDFG 618 HSP 3 Score: 59.3066 bits (142), Expect = 6.380e-13 Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 2 Query: 2054 YG*WFLLLEMFTGKRGTGEIFKDGMDLHNFVKRALPERLSQIVVHCLVQEGE 2209 Y LLLE+FTGKR T ++F +G+DLHNFVK ALP+++ Q++ + GE Sbjct: 661 YSYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDRLFLVGGE 712 HSP 4 Score: 44.2838 bits (103), Expect = 6.380e-13 Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 1 Query: 2263 DIKKDQIQDSLKELLKIGVACFREQPRERMKLS 2361 +IKK QI++SL +LKIGVAC E PRERM +S Sbjct: 721 NIKKGQIRESLIAILKIGVACSVESPRERMDIS 753
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: B9HUK5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s23500g PE=4 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 3.261e-61 Identity = 68/152 (44.74%), Postives = 92/152 (60.53%), Query Frame = 2 Query: 1088 KESKKVSKTQAYDWITLWTCGTCGTQAKMSLLVVNLLKRVKSEPAVALASSSTNKDL-LPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKAPV 1540 KESKK + + CG G ++ L+V ++ V ++S + D+ L ++ Y L +ATD FSS N+IGAGSFGSVYRGIL +VAVKV L GA KSFM EC L N+++RNLVK++ C+ VDF+GN+FKA V Sbjct: 612 KESKKPKTSTKLMLLIAIPCGCLGVFCVIACLLVCCFRK-----TVDKSASEASWDISLRRITYGELFQATDRFSSSNIIGAGSFGSVYRGILASDGAVVAVKVFNLPCKGASKSFMTECAALINIKHRNLVKVLGVCAGVDFEGNDFKALV 758 HSP 2 Score: 98.9821 bits (245), Expect = 3.261e-61 Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFM NG+LE WLHPV + +L +L QRL+I+IDVA+AL+YLHH CQ P+VH DLKPSN+LLD DM +HV DFG Sbjct: 760 EFMVNGSLEEWLHPVHVSNEACEARNL---NLIQRLSISIDVAAALDYLHHGCQVPVVHCDLKPSNVLLDGDMISHVGDFG 837 HSP 3 Score: 56.225 bits (134), Expect = 3.261e-61 Identity = 45/139 (32.37%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 1829 GLKGTLGFAAPGIIRWL--FLP*NTYNNNVYCFTGTLLHEILLVR*D*YYLLFY---------FCIAYLSNIQRYHF*FCRVWHGR-YG*WFLLLEMFTGKRGTGEIFKDGMDLHNFVKRALPERLSQIVVHCLVQEGE 2209 G+KGT+G+AAPG IR + +L V C + L L D ++++ + A ++ I Y +G YG LLLEMFTGKR T +F D ++LH + +LP+R+ +V L++E E Sbjct: 858 GIKGTIGYAAPGNIRIISHYL--------VDC-NSSFLVPFLRSHIDIWHMITFIPAKFHKQSLIFATMNMIAEYGMERKVSTYGDVYGYGILLLEMFTGKRPTHGMFNDELNLHTYAAMSLPDRVVDVVDSILLREVE 987 HSP 4 Score: 35.4242 bits (80), Expect = 3.261e-61 Identity = 13/48 (27.08%), Postives = 28/48 (58.33%), Query Frame = 1 Query: 2263 DIKKDQIQDSLKELLKIGVACFREQPRERMKLSDIIKELQLVLRLLIG 2406 D++ + L ++ +G+AC + P+ERM +S ++ EL + + +G Sbjct: 999 DVRAHKNFQCLTSIINVGLACSADLPKERMAMSTVVAELHRIRDIFLG 1046
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: V4SP28_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011359mg PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.323e-61 Identity = 76/131 (58.02%), Postives = 97/131 (74.05%), Query Frame = 2 Query: 1172 MSLLVVNLLKRVKSEPAVALASSSTNKDLLPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKAPV*VHA*WEF 1564 MSLL++N L++ ++ V + SS+ KDLL V Y+SLLKAT GFSS NL GAGS+ +LD + +VAVKVL+LH+ GALKSFMAECE L N+R+RNLVK+ITACSS DF+GN+FKA V +EF Sbjct: 233 MSLLIINRLRKKRT---VTGSESSSRKDLLLNVSYESLLKATGGFSSANLAGAGSY------VLDPDQTVVAVKVLFLHQRGALKSFMAECEVLRNIRHRNLVKIITACSSSDFEGNDFKALV-----YEF 349 HSP 2 Score: 113.235 bits (282), Expect = 3.323e-61 Identity = 59/81 (72.84%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFM NG+LE WLHP + + Y ILSL QRLNIAIDVASALEYLH HC KPIVH DLKPSNILLD DMTAHV DFG Sbjct: 348 EFMHNGSLEIWLHP--ESTSDDLNYSSRILSLLQRLNIAIDVASALEYLHRHCGKPIVHCDLKPSNILLDNDMTAHVGDFG 426 HSP 3 Score: 31.9574 bits (71), Expect = 3.323e-61 Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 2 Query: 1778 FRLAKFIK--LEATESSSAGLKGTLGFAAP 1861 F L +FI + + +SSS GLKGT+G+A P Sbjct: 425 FGLTRFIPEAIRSNQSSSIGLKGTVGYAPP 454 HSP 4 Score: 60.4622 bits (145), Expect = 2.186e-16 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 2 Query: 2054 YG*WFLLLEMFTGKRGTGEIFKDGMDLHNFVKRALPERLSQIV 2182 Y LLLE FTGKR T +IF +G+DLHNFVK ALPE++S+++ Sbjct: 469 YSYGILLLETFTGKRPTSDIFAEGLDLHNFVKNALPEQISEVL 511 HSP 5 Score: 54.6842 bits (130), Expect = 2.186e-16 Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 1 Query: 2266 IKKDQIQDSLKELLKIGVACFREQPRERMKLSDIIKELQLVLRLLI 2403 +K+DQ+Q+SL +LKIGVAC E PRERM +SD++ LQ V L+ Sbjct: 530 LKQDQVQESLATILKIGVACSVESPRERMDISDVVNNLQKVKSTLL 575
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: V4SLH7_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013853mg PE=4 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.025e-59 Identity = 62/94 (65.96%), Postives = 78/94 (82.98%), Query Frame = 2 Query: 1259 LPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILDQSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKAPV 1540 LP++ Y+SL KATDGFSS LIG GSFGSVY+G+LD+ IVA+KV+ L GA KSFMAEC+ L N+R+RNLV++IT+CSS+DFQGN+FKA V Sbjct: 669 LPKMSYQSLFKATDGFSSTRLIGVGSFGSVYKGVLDEDRTIVAIKVINLQCQGASKSFMAECKALKNIRHRNLVRVITSCSSIDFQGNDFKAIV 762 HSP 2 Score: 111.309 bits (277), Expect = 1.025e-59 Identity = 54/81 (66.67%), Postives = 64/81 (79.01%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 E+MPNG+LE WLHP A E + L+LPQRL+IAIDVASALEYLHHHCQ+PI+H DLKPSNILLD + +AH+ DFG Sbjct: 764 EYMPNGSLEKWLHP-DAALQRDEEIKIPKLTLPQRLSIAIDVASALEYLHHHCQEPILHCDLKPSNILLDKNFSAHIGDFG 843 HSP 3 Score: 36.5798 bits (83), Expect = 1.025e-59 Identity = 39/148 (26.35%), Postives = 59/148 (39.86%), Query Frame = 2 Query: 1778 FRLAKFIKL--EATESSSAGLKGTLGFAAP--GIIRWLFLP*NTYNNNVYCFTGTLLHEILLVR*D*YYLLFYFCIAYLSNIQRYHF*FCRVWHGRYG*WFLLLEMFTGKRGTGEIFKDGMDLHNFVKRALPERLSQIVVHCLVQEGE 2209 F LA+F + T SSS G++GT+G+ AP G+ + + N +VY + G LL LEM T K+ T +FK ++LH+F + ALP+ + IV L+ E Sbjct: 842 FGLARFHEAVSNPTSSSSVGVRGTIGYTAPEYGLGSEV-----STNGDVYSY-GILL----------------------------------------------LEMVTTKKPTDVMFKRDLNLHSFARMALPDHVMNIVDPILLNGDE 937
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Match: A0A0D2RSH0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G027800 PE=4 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.224e-59 Identity = 78/150 (52.00%), Postives = 99/150 (66.00%), Query Frame = 2 Query: 1100 KVSKTQAYDWITLWTCGTCGTQAKMSLLVVNLLKR-VKSE--PAVALASSSTNKDLLPQVFYKSLLKATDGFSSGNLIGAGSFGSVYRGILD--QSEIIVAVKVLYLHRTGALKSFMAECETLSNVRYRNLVKLITACSSVDFQGNEFKA 1534 K KT I L CG G +S+L + L KR K+E AV L ++S + V ++ LLKATDGFS NLIG GSFG VYRG+LD Q + ++AVKV+ L GA +SF+ EC+TL NVR+RNLVK+I+ACSS+DFQGN FKA Sbjct: 653 KQHKTSDSLKIILIVCGVIGI-LMLSILFLWLRKRGAKTELSSAVPLGTAS-----ILMVSFQQLLKATDGFSPANLIGQGSFGRVYRGVLDRNQEQNVIAVKVMNLQEQGASRSFLTECKTLGNVRHRNLVKIISACSSIDFQGNPFKA 796 HSP 2 Score: 103.219 bits (256), Expect = 2.224e-59 Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = 3 Query: 1542 EFMPNGNLESWLHPVPNAGGNGSEYDLLILSLPQRLNIAIDVASALEYLHHHCQKPIVHRDLKPSNILLDYDMTAHVSDFG 1784 EFMPN +LE WLH PN + +L+ QRLNIAI+VASAL+YLHHHC P++H DLKPSNILLD+DM AHV DFG Sbjct: 800 EFMPNRSLERWLHDAPN---ETNTIQPKMLNFAQRLNIAIEVASALDYLHHHCVVPLLHCDLKPSNILLDHDMVAHVGDFG 877 HSP 3 Score: 45.0542 bits (105), Expect = 2.224e-59 Identity = 45/147 (30.61%), Postives = 57/147 (38.78%), Query Frame = 2 Query: 1778 FRLAKFI-----KLEATESSSAGLKGTLGFAAP--GIIRWLFLP*NTYNNNVYCFTGTLLHEILLVR*D*YYLLFYFCIAYLSNIQRYHF*FCRVWHGRYG*WFLLLEMFTGKRGTGEIFKDGMDLHNFVKRALPERLSQIVVHCLV 2197 F LA+F K +S+ GLKGT+G+AAP GI T + ++Y F G LL E MFT KR E FKDG LH FVK ALP+R+ +V L+ Sbjct: 876 FGLARFFPKSMNKFSGNSTSTVGLKGTVGYAAPEYGIGME-----PTTSGDMYSF-GILLLE----------------------------------------------MFTRKRPIDETFKDGQTLHLFVKTALPDRVLDVVDPLLL 970 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097919 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097919 ID=g.barbadense_cottongen_reftransV1_0097919; Name=g.barbadense_cottongen_reftransV1_0097919; organism=Gossypium barbadense; type=contig; length=2657bpback to top |