g.barbadense_cottongen_reftransV1_0097850, g.barbadense_cottongen_reftransV1_0097850 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097850
Unique Nameg.barbadense_cottongen_reftransV1_0097850
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3244
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At01chromosomeg.barbadense_cottongen_reftransV1_0097850:1..3244 .
At01:36609527..36615279 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2A_ARATH (Protein NETWORKED 2A OS=Arabidopsis thaliana GN=NET2A PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.765e-51
Identity = 118/229 (51.53%), Postives = 150/229 (65.50%), Query Frame = -2
Query: 2638 FWLRFSTSIHQIQKYQTSVKDLKAELSKLR--EKIHQEG----SGGKMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVT--NATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKEL------XXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKKS-------------LQKQLSYIIEP 3243
            FWLRFSTS+HQIQKYQT+V+DLK+ELSKLR   K  QE     S   + SE  PI+ HLREI+TEL LWLEN+ VLKDE+Q R+ SL N Q+EIARVT  +  N+  ++ IS YQAAKF GE+LNMKQE K+V  EL++G  R   LK EVE+I + LE++L       + T+    S S +PR+P++SFLFG+K K  R+ K+S             L KQ SY   P
Sbjct:  714 FWLRFSTSVHQIQKYQTTVQDLKSELSKLRIESKQQQESPRSSSNTAVASEAKPIYRHLREIRTELQLWLENSAVLKDELQGRYASLANIQEEIARVTAQSGGNKVSDSEISGYQAAKFHGEILNMKQENKRVSTELHSGLDRVRALKTEVERILSKLEEDLGISSATEARTTPSKSSSSGRPRIPLRSFLFGVKLKKNRQQKQSASSLFSCVSPSPGLHKQSSYSRPP 942          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2B_ARATH (Protein NETWORKED 2B OS=Arabidopsis thaliana GN=NET2B PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.607e-50
Identity = 111/229 (48.47%), Postives = 149/229 (65.07%), Query Frame = -2
Query: 2638 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGK-----MKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGR--ETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKEL-------XXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKK-------------SLQKQLSYIIEP 3243
            FWLRFSTS+HQIQKY TSV+DLKAELSK+  K  Q+G+ G      + SE  PI+ HLREI+TEL LWLEN+ +L+DE++ R+ +LCN +DE++RVT+ +       T I  YQAAKF GE+LNMKQE K+V +EL AG  RA  L+ EVE++   LE+ L       + S S +  S + +PR+P++SFLFG+K K  ++  K             +L KQ SYII P
Sbjct:  692 FWLRFSTSVHQIQKYHTSVQDLKAELSKIESK--QQGNAGSSSNTALASEAKPIYRHLREIRTELQLWLENSAILRDELEGRYATLCNIKDEVSRVTSQSGATEVSNTEIRGYQAAKFHGEILNMKQENKRVFNELQAGLDRARALRAEVERVVCKLEENLGILDGTATRSLSKRMPSSAGKPRIPLRSFLFGVKLKKYKQQPKQTSTIFSCVSPSPALNKQCSYIIPP 918          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2D_ARATH (Protein NETWORKED 2D OS=Arabidopsis thaliana GN=NET2D PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.578e-38
Identity = 89/191 (46.60%), Postives = 118/191 (61.78%), Query Frame = -2
Query: 2695 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGK---MKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKELXXXXXXXXXX-----XXXQPRVPMQSFLFGIKFK 3243
            FWLRFST+  QIQ Y TS++DL+AE+SKL ++  Q+GS      ++S+V P++ HLREI T+L LWLE    LK+E++ R  SLCN QDEI +   ++    +   + YQAAKFQGEVLNMKQE  KV DEL AG      L+ EV+K    L  E + S S             + RVP++SF+FG K K
Sbjct:  735 FWLRFSTAFGQIQSYDTSIEDLQAEISKLEQRRKQDGSSTAKYALRSDVRPLYVHLREINTDLGLWLEKGAALKEELKSRFESLCNIQDEITKALKSSAEDDDFRFTSYQAAKFQGEVLNMKQENNKVADELQAGLDHITTLQLEVDKTLGKLIDEFALSGSKNKSDLDLQHSDSRSRVPLRSFIFGSKQK 925          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: KIP1_PETIN (Kinase-interacting protein 1 OS=Petunia integrifolia GN=KIP1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.362e-37
Identity = 87/190 (45.79%), Postives = 126/190 (66.32%), Query Frame = -2
Query: 2680 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGG-KMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKEL-XXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKT 3243
            FWLRFS++ HQIQK++T+V DL+ E+SK R+K  Q  S    +KSE+ P++ H++EI+ ELT+WLE    LKDE++ R  +LC+ Q+EI++         ET  S +QAAKFQGEVLNMK E KKV +EL AG +R   L+++VEK    L++E   +   SQ      + R+P+QSF+FG K K  +++
Sbjct:  775 FWLRFSSAFHQIQKFKTTVHDLQNEISKARDKEMQGNSPRVDVKSEIRPLYKHMKEIQNELTVWLEQTLSLKDELERRFSALCSIQEEISKGLKEEVED-ETTFSSHQAAKFQGEVLNMKHENKKVREELEAGISRVTILQEDVEKTVTQLDQEFGLTGNQSQLMQSVSKSRIPLQSFIFGTKPKKEKRS 963          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2C_ARATH (Protein NETWORKED 2C OS=Arabidopsis thaliana GN=NET2C PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.332e-25
Identity = 73/208 (35.10%), Postives = 122/208 (58.65%), Query Frame = -2
Query: 2623 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGKMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKELXXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKKS-LQKQLSYIIEPKEPSG 3243
              +RFS S  +IQ++ T +KDL  E+ K+ ++ +Q+G    ++S V PI+ HL EI+TE+T+WLE + +LK+E+  R  +L +  +EI       +   E   + YQ AKF+GEV NMK+E  ++ +EL  G  +  +L ++ +     L +E  S + S  QS   + R+P++SF+F  K K +R +  S +Q  LS +   K+P+G
Sbjct:  644 LLVRFSNSFGKIQQFDTGIKDLHGEMLKIIKQKNQDGGKNTLRSNVRPIYKHLSEIRTEMTVWLEKSLLLKEEINIRASTLSDIHNEITEALKTDSEDSEIKFTIYQGAKFEGEVSNMKKENNRIAEELQTGLDQVTKLMKDADTTLEKLSEEF-SLSESNTQSSQDRSRIPLRSFIFDRKPKKQRLSLFSCIQPSLSKM---KKPAG 847          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A5AHT3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010188 PE=4 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 3.481e-83
Identity = 297/703 (42.25%), Postives = 374/703 (53.20%), Query Frame = 1
Query:  196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEG-NSAIPQLSEAQLATRSALSLALDMPDKNLTAACT---NNPGLKIMSSSAPPTAGGEASARAQSQVQQGPLASVEAPIQSQQGPIASVSSRNRSQEGPITSASPQNPSQQGPVASVQVPNQSQQGSMPTKTSPRGSSGSTLKSRVTLKKAPAKPFSTTGSILDATAVAAGARIGSPEXXXXXXXXXXXXXXIHIMTTAGSSVKPVIPSGT------------SSQYVCTG--LTAEAHSSPVTSSTLHPGSVKTATQRVEHTSSVS-LSINAPMQQCNAVTSGTAVEVSPKEDL----EIKGSVSDSLPKEQVRENRAYVSKNERGEEVKEHKEALTNPGSELRNIVAEAEHPNEKLMVDGDQVGVKANPVE------ESVNASDSK--DCLLVKKSTTQPTAEESCRNHSMTEMPAKASSLSDGCA-KNLEVLSTAETGR 2208
            M++  K +KKG+ISEED+S LLQR           E +   G                        +W        LLEKLEDGA PLDDDSDLEY+LE  PS+S+E SAEA ACVKVLIAS LP+DSSL NSSMV+APLTINIP  +S R  SE  + S SM GTNIT+PVSVQK        +E  + NG    +LPAR+KRKPWS  ED ELIAAVQKCG GNWANIL+GDFKGDR+ASQL+QRWT+I+K+  NLNV G NS   QLSEAQLA R A+SLALDMP KNLT + +    NP     +S+ P T                P  ++ A             S N SQ         Q  SQQGPV+++     SQ GS+          GS  KSR T KK  AK   ++ S+L ATAVAAGARI +P AAASLLK AQS+NA+HIM    + +K  +  G             +  Y C G   T+ +  S V  S    GS K A    +   S S  S+N   +Q NA T+  AVE   K++     E K  +S ++PK +V E++A VS N   E+V+E +  L+N       +V E    N+K MV   +  +K    E      ES N +D+K  D  +  +   Q  A E+  N +  E      + +  C  K+ EVL  A  G 
Sbjct:    1 MVEMPKMRKKGTISEEDVSALLQR-----------EYSDASGA-----------------------IW---PMAXALLEKLEDGAQPLDDDSDLEYDLEAFPSISTEASAEATACVKVLIASSLPSDSSLPNSSMVEAPLTINIPCGQSSRAPSEYSRLSGSMQGTNITIPVSVQK--------SEGFDANGSTSGSLPARKKRKPWSSDEDKELIAAVQKCGEGNWANILKGDFKGDRSASQLSQRWTIIRKKHKNLNVGGANSNGSQLSEAQLAARHAMSLALDMPVKNLTTSSSIAGTNPNATSSNSAFPAT----------------PAEALPA-------------STNISQ--------AQQLSQQGPVSTL-----SQMGSL----------GSAPKSRATSKKTSAKSTFSSQSMLKATAVAAGARIATPSAAASLLKDAQSRNAVHIMPGGSTLIKSSVAGGANPLPANHLGAHPNVHYKCAGPPTTSLSTYSAVAPSVSRTGSAKPAAPGGQLAPSPSATSVNISSEQTNAATTSLAVEYPAKQETKTSEETKVPISGNVPKAKVLEDQACVSSNTASEQVQEDQATLSN-----TEVVLE----NKKAMVSDTKCLLKTETAENDGEVAESQNVNDNKIMDFRVAGECENQSVANENSGNQNANEKQTDLPNTATDCGEKSDEVLYKATAGE 597          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: K4BU74_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g076360.2 PE=4 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 7.993e-79
Identity = 172/299 (57.53%), Postives = 220/299 (73.58%), Query Frame = 1
Query:  196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPDKNLTAACTNNP 1092
            M++  K  K+G ++E+D+STLLQRYTA T+L LLQEV Q  G K+DWN LVKKT+TGI++AREYQM+WRHLAYR VLL+K +D A P+DDDSDLEYELE  P VSSE S EAAA  KV IASG   DS+++N + V+A LTI IPN ++    + N     S  G  +TVPV+VQ + +PSV++AE ++ +GPA ANLP RR+RK W+ AED+ELI AVQK G GNWANIL+ DFKGDRTASQL+QRW  I+K+  ++ + GN +   LSEAQLA R A+S+A      N+ AAC  +P
Sbjct:    1 MVEKRKVNKRGFVTEDDMSTLLQRYTAFTMLTLLQEVGQVNGSKIDWNDLVKKTATGITSAREYQMVWRHLAYRKVLLDKFDDNAQPMDDDSDLEYELESFPPVSSEASTEAAAWGKVFIASGALRDSNMSNGNTVEASLTIQIPNGQTSGTVAANSLQGISAFGKKLTVPVTVQTQPMPSVSAAEGLDTSGPATANLP-RRRRKAWTGAEDMELITAVQKYGEGNWANILKTDFKGDRTASQLSQRWATIRKQ--HVMMVGNGS--HLSEAQLAARHAVSMAF---RDNVRAACPISP 291          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: M0T6J5_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.030e-78
Identity = 211/457 (46.17%), Postives = 281/457 (61.49%), Query Frame = 1
Query:  220 KKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNV-EGNSAIPQL-SEAQLATRSALSLALDMPDKNLTAACTNNPGLKIMSSSAPPTAGGEASARAQSQVQQGPLASVEAPIQSQQGPIASVSSRNRSQEGPITSASPQNPSQQGPVASVQVPNQSQQGSMPTKTSPRGSSGSTLKSRVTLKKAPAKPFSTTGSILDATAVAAGARIGSPEXXXXXXXXXXXXXXIHIMTTAGSSVKPV 1584
            +K  ISEED+S LLQRY  TT+L LLQEV++  GV++DWNALVK+T+TGI++AREYQMLWRHLAY   LLE +EDGA+PLDD+SDLE E+E  P+VS E  +EAAACVKVLI+ G+P +  L + + ++ PL +N  N ++ RVSS+  Q S S  GT+ITVP ++QK+   + TSAE ++GNG AG ++  +++RKPW++ ED+ELIA VQK G GNWANIL+GDFK +RTASQL+QRW +I+KR  NL    GN ++    SE +LAT+ A+SLALDMP+    +A        I+S       GG  S    S        S   P+ SQ                      P N  QQ    +      SQ+ ++ T   PR +   ++         P KP S   S++ A A AAG RI +P  AASL KAAQSKNA+HI    G+   P+
Sbjct:    7 RKVGISEEDVSLLLQRYNPTTILTLLQEVSEAAGVRIDWNALVKRTATGITSAREYQMLWRHLAYHHTLLETIEDGAEPLDDESDLELEIEAVPAVSGEALSEAAACVKVLISCGVPREQGLTSRTAIETPLAVNGFNNQALRVSSDKQQLSQSNYGTDITVP-TLQKQPQSTGTSAEGLDGNGMAGPSIAPKKRRKPWTKEEDMELIAGVQKFGEGNWANILKGDFKHNRTASQLSQRWAIIRKRDTNLLASSGNKSMSSTRSEERLATQKAISLALDMPNSGRLSA--------ILS-------GGTQSITPASSSALSAALSEALPVSSQ----------------------PLNQLQQASTLAT-----SQKITLNTSNKPRTTPKKSM--------VPVKPSSGPNSLIQAAAFAAGGRIATPSTAASLFKAAQSKNAVHIRPGGGARPSPI 412          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A0A0LHM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G891670 PE=4 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 3.434e-78
Identity = 161/293 (54.95%), Postives = 216/293 (73.72%), Query Frame = 1
Query:  196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENL--QPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQL-ATRSALSLALDMPDKN 1065
            M+   + ++ G+IS ED S LL+RY+  T+L LL+EVAQ  GV++DW+ LV+ TSTGIS+AREYQ+LWRHLAYR  LLE +    D LD DSDL++E+EP PSVSSE+S EA+ACVKVLIA+ +PN+S + NSS V+APLTI I N +    S++NL    S  +   ++T+P+S+Q++ +P  ++ E ++ NG       +R++RKPWS+AEDLELIAAV+KCG GNWANIL+GDFKGDRTASQL+QRW+VI+KR  NLN+ G S      +AQ+ A   ALS ALD+P  N
Sbjct:    1 MMGKKENRRTGTISMEDCSPLLERYSVRTILTLLREVAQVSGVRIDWDKLVENTSTGISDAREYQLLWRHLAYRQTLLEDMHSVTDSLDYDSDLDFEVEPFPSVSSESSNEASACVKVLIANSIPNESDVPNSSAVEAPLTIGISNCQP---STDNLDHHQSTYLQRMSVTIPLSIQRQPIPMPSATEVIDVNGAT-----SRKRRKPWSKAEDLELIAAVEKCGEGNWANILKGDFKGDRTASQLSQRWSVIRKRRCNLNI-GASTSSTAHKAQIDAAHRALSFALDLPVNN 284          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: K7KJ58_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 5.611e-73
Identity = 165/297 (55.56%), Postives = 211/297 (71.04%), Query Frame = 1
Query:  211 KKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRG-DFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPDKNLTAACTNNPGL 1098
            KK KK S +EED  TL+QRY ATTV  LLQEVA +P  K+DW  LVKK++T ISNAREYQMLWRHLAYR  L E  EDG +PLDDDSDLE ELE  P VS E ++EAAACVKV+IAS   ++S+  +SS ++APLTIN+P   S R   EN QPS  M GT+I  PV+VQ++ LP+++S + +E  G  G N+ ++RKRK WSE ED++L AAVQ+ G GNWA + +G DF   R+A+QLAQRW++++K+ G  N    ++    +  QLATR +LSLALDMP K LTA     PG+
Sbjct:    4 KKNKKVSFTEEDAVTLMQRYDATTVFTLLQEVAHYPHPKIDWCELVKKSATEISNAREYQMLWRHLAYRHSLPEIFEDGDEPLDDDSDLECELEAFPPVSVECASEAAACVKVMIASRTLSESA-PSSSTIEAPLTINVPVCHSSRTPIENSQPSNLMQGTSIIFPVTVQRQTLPTISSTDGIETKGIVGGNMASKRKRKAWSEEEDMQLRAAVQRWGEGNWATMAKGDDFPIKRSATQLAQRWSILRKKDGCTNTGTITSTQYTTAEQLATRHSLSLALDMPFKKLTA-----PGM 294          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
NET2A_ARATH1.765e-5151.53Protein NETWORKED 2A OS=Arabidopsis thaliana GN=NE... [more]
NET2B_ARATH2.607e-5048.47Protein NETWORKED 2B OS=Arabidopsis thaliana GN=NE... [more]
NET2D_ARATH1.578e-3846.60Protein NETWORKED 2D OS=Arabidopsis thaliana GN=NE... [more]
KIP1_PETIN3.362e-3745.79Kinase-interacting protein 1 OS=Petunia integrifol... [more]
NET2C_ARATH1.332e-2535.10Protein NETWORKED 2C OS=Arabidopsis thaliana GN=NE... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A5AHT3_VITVI3.481e-8342.25Putative uncharacterized protein OS=Vitis vinifera... [more]
K4BU74_SOLLC7.993e-7957.53Uncharacterized protein OS=Solanum lycopersicum GN... [more]
M0T6J5_MUSAM1.030e-7846.17Uncharacterized protein OS=Musa acuminata subsp. m... [more]
A0A0A0LHM8_CUCSA3.434e-7854.95Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
K7KJ58_SOYBN5.611e-7355.56Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 203..254
e-value: 5.4E-11
score: 52.5
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 204..249
e-value: 3.9E-7
score: 30.0
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 200..252
e-value: 3.1E-12
score: 45.6
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 201..257
NoneNo IPR availablePANTHERPTHR21717:SF20DNA BINDING PROTEINcoord: 6..379
NoneNo IPR availablePANTHERPTHR21717TELOMERIC REPEAT BINDING PROTEINcoord: 6..379
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 199..256
score: 13.342

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097850 ID=g.barbadense_cottongen_reftransV1_0097850; Name=g.barbadense_cottongen_reftransV1_0097850; organism=Gossypium barbadense; type=contig; length=3244bp
CACTTCTATACACGCCTATCCTTTTCTTCTTCTTCTCCTTCTTCTTCCCT
CTCTCTCTCTCTGTCTCTTTCTGCTTTCAAAGGGTTTTAGTAGGTGCTTT
CCCTTTTTCTTAAACCCTACCTAGGGTTTTCACAAACTCCCAATTCAACT
TCTTTTTTCTTTAATTACCCTGCAATTTTCCACCAATCAACAACTATGAT
TCAAAATACCAAGAAACAGAAAAAAGGTTCAATTAGTGAGGAAGATATCT
CTACTCTTTTACAAAGGTATACAGCAACTACTGTTTTGGCACTGTTGCAA
GAAGTTGCGCAATTTCCTGGGGTAAAGTTGGATTGGAATGCTTTAGTCAA
GAAGACTTCTACTGGCATTTCGAATGCGAGAGAGTACCAGATGTTGTGGC
GCCATTTGGCCTACAGAGACGTTTTGCTTGAAAAATTGGAAGATGGGGCT
GATCCCTTGGATGATGACAGCGACTTAGAATATGAATTGGAACCTTGCCC
TTCTGTTAGTAGTGAAACTTCAGCAGAGGCTGCTGCATGTGTGAAGGTAC
TGATTGCTTCTGGTTTGCCAAATGACTCAAGTCTTGCAAATAGCTCAATG
GTGGATGCTCCATTAACAATAAATATACCTAATGCGAGGTCATTTAGAGT
GTCTTCAGAAAATTTGCAGCCCAGTTGCTCAATGCCAGGGACGAACATTA
CTGTTCCAGTTTCTGTTCAGAAAAAGATTCTACCTTCAGTGACATCGGCT
GAAACAATGGAAGGAAATGGACCAGCTGGTGCAAACCTGCCTGCTCGCAG
GAAAAGAAAACCTTGGTCAGAAGCAGAGGATTTGGAACTTATTGCTGCTG
TGCAGAAATGCGGTGTTGGGAATTGGGCAAACATCTTACGAGGAGACTTC
AAGGGAGATAGGACTGCTTCACAGTTGGCTCAGAGGTGGACTGTTATTAA
GAAGCGATGTGGCAACTTAAATGTGGAAGGAAACTCAGCAATTCCCCAGC
TTTCTGAGGCACAGTTGGCAACTCGTAGTGCCTTGTCTTTAGCCCTTGAT
ATGCCAGATAAAAATTTAACTGCTGCTTGTACAAATAACCCTGGTTTGAA
GATCATGTCCAGCTCTGCACCTCCAACTGCTGGTGGTGAAGCTTCTGCTC
GAGCCCAAAGCCAGGTCCAACAAGGTCCCCTTGCTTCTGTTGAAGCCCCA
ATTCAGTCTCAACAAGGCCCTATTGCTTCTGTCTCATCCCGTAATCGATC
TCAAGAGGGTCCTATTACTTCTGCATCTCCCCAAAATCCATCCCAGCAAG
GTCCTGTTGCTTCAGTCCAAGTCCCAAATCAGTCTCAACAAGGTTCCATG
CCTACAAAAACCTCCCCCAGGGGATCATCTGGTTCTACTTTGAAATCTCG
GGTTACCTTGAAAAAGGCCCCAGCAAAACCTTTTTCCACCACAGGTTCGA
TCCTAGATGCCACTGCAGTTGCTGCTGGGGCACGCATTGGTAGCCCAGAG
GCTGCTGCATCACTGCTGAAGGCTGCTCAATCCAAAAATGCTATTCATAT
TATGACTACTGCTGGCTCTTCTGTTAAACCTGTCATACCAAGCGGAACCT
CTTCCCAATATGTTTGTACTGGCTTAACAGCTGAAGCACACTCTTCTCCT
GTTACATCTTCTACCTTGCATCCTGGTTCAGTAAAAACTGCAACGCAGAG
AGTTGAGCATACTTCATCTGTTTCTTTGTCAATAAATGCACCAATGCAGC
AGTGTAATGCTGTTACATCTGGTACAGCCGTTGAAGTTTCTCCAAAGGAA
GATCTAGAGATCAAGGGTTCTGTGTCAGACAGTTTGCCCAAAGAGCAGGT
ACGGGAAAATAGAGCATATGTTTCAAAAAATGAACGAGGTGAGGAAGTTA
AAGAACATAAAGAAGCCTTGACAAACCCAGGATCTGAGTTGAGGAATATC
GTGGCTGAAGCTGAACATCCTAACGAGAAATTAATGGTTGACGGTGATCA
AGTAGGTGTCAAAGCAAACCCGGTCGAAGAGAGTGTAAATGCCAGTGATA
GTAAGGATTGCTTATTGGTTAAGAAAAGCACAACTCAGCCTACAGCTGAA
GAGAGTTGCAGGAATCATAGCATGACTGAGATGCCGGCTAAAGCCAGCTC
TTTAAGTGATGGATGCGCAAAGAATCTTGAAGTTTTGAGCACAGCAGAAA
CTGGCCGAGCTACATAGCGAGACATAGCATCTTGTTTATATTAATACATT
TATACATTAAGGTTTTCTATCCTGCCATTTTAGAAAAAATATATTGTAGA
TTTATTTGGAAAATGGATCTCGTGAAAAAGAAAGAAATTGCATTCCACAC
CAGTGTTACTCTGGTAGTTGTTGTAGAAGATAATTGTGTACTCTTTTTGT
GTCACAAATCATTCATAAGCGGGATTCAATTCAAGACTTCTCCAGCATTT
GGATTAAAATAGTTGAAGATATAACAATCTTTTGCCTCATCCCTTTCATA
CAATTATGTGGTAAATCTTGGAAACATCTGTTACTTGTACACTAGAAACA
TGAAGGACTAGACTAGAAAGTATCAACCCAAAAGAATTGTGGTGAGAAGT
AGCTGTAAGAGGCAAGAGTCTATCCTGAAGGTTCTTTAGGTTCTATTATG
TAACTGAGCTGTTTCTGCAATGATTTCTTTGTCTTCCTTCTGTTCTTAAA
CTTTATTCCGAATAAGAAAGATTGCATAGGAACTCGAGGCTGCCAGGATT
TTGACTGGAATTGTGAAGATGTTGAGGAGCTGAGTTCTTTCTCCAAATCT
GCTGTTATTTTCTCGACTTCCTGCTTGAGTTGCCCCGCACGAGTGAAGCC
TGCATTCAGTTCATCGCCAACTTTTTTGATTTCCTGTTTCATGTTGAGAA
CCTCACCTTGAAACTTGGCAGCCTGATATTCACTGATCCCAGTTTCTCTA
CCACGGTTGGTCGCATTGGTAACTCTTGCTATCTCATCTTGGAAGTTGCA
CAACGAGAAATGTCTATCTTGGACTTCGTCTTTCAACACTTCATTGTTTT
CCAACCATAATGTTAATTCAGTTTTTATTTCTCTCAAGTGAGAAAAGATG
GGGCACACTTCCGATTTCATCTTCCCTCCGCTTCCTTCTTGATGAATCTT
TTCTCTCAACTTTGATAACTCTGCTTTCAAGTCCTTGACTGAAGTTTGAT
ATTTCTGTATCTGATGAATTGATGTGCTGAACCTCAACCAGAAC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding