g.barbadense_cottongen_reftransV1_0097850, g.barbadense_cottongen_reftransV1_0097850 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2A_ARATH (Protein NETWORKED 2A OS=Arabidopsis thaliana GN=NET2A PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.765e-51 Identity = 118/229 (51.53%), Postives = 150/229 (65.50%), Query Frame = -2 Query: 2638 FWLRFSTSIHQIQKYQTSVKDLKAELSKLR--EKIHQEG----SGGKMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVT--NATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKEL------XXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKKS-------------LQKQLSYIIEP 3243 FWLRFSTS+HQIQKYQT+V+DLK+ELSKLR K QE S + SE PI+ HLREI+TEL LWLEN+ VLKDE+Q R+ SL N Q+EIARVT + N+ ++ IS YQAAKF GE+LNMKQE K+V EL++G R LK EVE+I + LE++L + T+ S S +PR+P++SFLFG+K K R+ K+S L KQ SY P Sbjct: 714 FWLRFSTSVHQIQKYQTTVQDLKSELSKLRIESKQQQESPRSSSNTAVASEAKPIYRHLREIRTELQLWLENSAVLKDELQGRYASLANIQEEIARVTAQSGGNKVSDSEISGYQAAKFHGEILNMKQENKRVSTELHSGLDRVRALKTEVERILSKLEEDLGISSATEARTTPSKSSSSGRPRIPLRSFLFGVKLKKNRQQKQSASSLFSCVSPSPGLHKQSSYSRPP 942
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2B_ARATH (Protein NETWORKED 2B OS=Arabidopsis thaliana GN=NET2B PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.607e-50 Identity = 111/229 (48.47%), Postives = 149/229 (65.07%), Query Frame = -2 Query: 2638 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGK-----MKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGR--ETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKEL-------XXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKK-------------SLQKQLSYIIEP 3243 FWLRFSTS+HQIQKY TSV+DLKAELSK+ K Q+G+ G + SE PI+ HLREI+TEL LWLEN+ +L+DE++ R+ +LCN +DE++RVT+ + T I YQAAKF GE+LNMKQE K+V +EL AG RA L+ EVE++ LE+ L + S S + S + +PR+P++SFLFG+K K ++ K +L KQ SYII P Sbjct: 692 FWLRFSTSVHQIQKYHTSVQDLKAELSKIESK--QQGNAGSSSNTALASEAKPIYRHLREIRTELQLWLENSAILRDELEGRYATLCNIKDEVSRVTSQSGATEVSNTEIRGYQAAKFHGEILNMKQENKRVFNELQAGLDRARALRAEVERVVCKLEENLGILDGTATRSLSKRMPSSAGKPRIPLRSFLFGVKLKKYKQQPKQTSTIFSCVSPSPALNKQCSYIIPP 918
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2D_ARATH (Protein NETWORKED 2D OS=Arabidopsis thaliana GN=NET2D PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.578e-38 Identity = 89/191 (46.60%), Postives = 118/191 (61.78%), Query Frame = -2 Query: 2695 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGK---MKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKELXXXXXXXXXX-----XXXQPRVPMQSFLFGIKFK 3243 FWLRFST+ QIQ Y TS++DL+AE+SKL ++ Q+GS ++S+V P++ HLREI T+L LWLE LK+E++ R SLCN QDEI + ++ + + YQAAKFQGEVLNMKQE KV DEL AG L+ EV+K L E + S S + RVP++SF+FG K K Sbjct: 735 FWLRFSTAFGQIQSYDTSIEDLQAEISKLEQRRKQDGSSTAKYALRSDVRPLYVHLREINTDLGLWLEKGAALKEELKSRFESLCNIQDEITKALKSSAEDDDFRFTSYQAAKFQGEVLNMKQENNKVADELQAGLDHITTLQLEVDKTLGKLIDEFALSGSKNKSDLDLQHSDSRSRVPLRSFIFGSKQK 925
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: KIP1_PETIN (Kinase-interacting protein 1 OS=Petunia integrifolia GN=KIP1 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.362e-37 Identity = 87/190 (45.79%), Postives = 126/190 (66.32%), Query Frame = -2 Query: 2680 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGG-KMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKEL-XXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKT 3243 FWLRFS++ HQIQK++T+V DL+ E+SK R+K Q S +KSE+ P++ H++EI+ ELT+WLE LKDE++ R +LC+ Q+EI++ ET S +QAAKFQGEVLNMK E KKV +EL AG +R L+++VEK L++E + SQ + R+P+QSF+FG K K +++ Sbjct: 775 FWLRFSSAFHQIQKFKTTVHDLQNEISKARDKEMQGNSPRVDVKSEIRPLYKHMKEIQNELTVWLEQTLSLKDELERRFSALCSIQEEISKGLKEEVED-ETTFSSHQAAKFQGEVLNMKHENKKVREELEAGISRVTILQEDVEKTVTQLDQEFGLTGNQSQLMQSVSKSRIPLQSFIFGTKPKKEKRS 963
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2C_ARATH (Protein NETWORKED 2C OS=Arabidopsis thaliana GN=NET2C PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.332e-25 Identity = 73/208 (35.10%), Postives = 122/208 (58.65%), Query Frame = -2 Query: 2623 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGKMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKELXXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKKS-LQKQLSYIIEPKEPSG 3243 +RFS S +IQ++ T +KDL E+ K+ ++ +Q+G ++S V PI+ HL EI+TE+T+WLE + +LK+E+ R +L + +EI + E + YQ AKF+GEV NMK+E ++ +EL G + +L ++ + L +E S + S QS + R+P++SF+F K K +R + S +Q LS + K+P+G Sbjct: 644 LLVRFSNSFGKIQQFDTGIKDLHGEMLKIIKQKNQDGGKNTLRSNVRPIYKHLSEIRTEMTVWLEKSLLLKEEINIRASTLSDIHNEITEALKTDSEDSEIKFTIYQGAKFEGEVSNMKKENNRIAEELQTGLDQVTKLMKDADTTLEKLSEEF-SLSESNTQSSQDRSRIPLRSFIFDRKPKKQRLSLFSCIQPSLSKM---KKPAG 847
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: M5XCP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002943mg PE=4 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 3.160e-115 Identity = 304/695 (43.74%), Postives = 401/695 (57.70%), Query Frame = 1 Query: 196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVT-----SAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCG-NLNVEGNSAIPQLSEAQLATRSALSLALDMPDKNLTAACTNNPGLKIMSSSAPPTAGGEASARAQSQVQQGPLASVEAPIQSQQGPIASVSSRNRSQEGPITSASPQNPSQQGPVASVQVPNQSQQGSMPTKTSPRGSSGSTLKSRVTLKKAPAKPFSTTGSILDATAVAAGARIGSPEXXXXXXXXXXXXXXIHIMTTAGSSVKPVIPSGTSS--------QYVCTGLTAEAHSSP----VTSSTLHPGSVKTATQRVEHTSSVSLSINAPMQQCNAVTSGTAVEVSPKEDLEIKGSVSDSLPKEQVRENRAYVSKNERGEEVKEHKEALTNPGSELRNIVAEAEHPNEKLMVDGDQ------VGVKANPVEESVNASDSKDCLLVKKSTTQPTAEESCRNHSMTEMP-AKASSLSDGCAKNLEVLSTAETG 2205 M++ TK +K I+EED + LLQRY A VL LLQEVA VK+DWN LV+KTSTGISNAREYQMLWRHLAY + ++ ++GA P+DDDSDLE+ELE P+V E S EAAACVKVL+ASGLP+DS+ + + V+APLTINIPN + R + +N QP CSM G NITVPVSVQK+ L ++T +AE + NG A N+ R+KRK WSEAEDLELIA V++ G GNWANILRGDFKG+RTA+QL+QRW I+K +LNV GNS+ +LSEAQLATR A+SLAL+MP ++TA G S G +A S P + E +QSQQG P P Q G + GST KS++T KK KP S T ++ ATAVAAGARI SP AASLLKAAQ+KNA+H++ T GSS++ +P + Y+ TGL A S+P VT S HPGS+K Q +H + S ++ ++ +VS D E+ + P EQV++ A +S+N + EE ++ K + +EL+N+ AE+ L + GD+ +GV++ EE +A D++ +K P A +SC N S +E S + DGC +VL ETG Sbjct: 1 MVEKTKDPEKSYITEEDTANLLQRYQAANVLHLLQEVAHSQDVKIDWNRLVEKTSTGISNAREYQMLWRHLAYSEAFVDNFDNGAQPVDDDSDLEHELEAFPAVIGEDSTEAAACVKVLMASGLPSDSTHRSGATVEAPLTINIPNGQPSR-THQNSQPPCSMQGMNITVPVSVQKQPLLAMTTSTGATAEGGDANGSASNNMAPRKKRKKWSEAEDLELIAGVRRYGEGNWANILRGDFKGERTANQLSQRWKYIRKHHHQDLNVGGNSS-NKLSEAQLATRHAMSLALNMP--SITANTIGTAGTNTHSKF------GGTNATTNSL----PSTAAEEELQSQQG------------------LKPAKPYQMGLL------------------------GSTSKSQLTSKKTLTKPNSNTDGMVRATAVAAGARIASPSDAASLLKAAQAKNAVHVLPTGGSSIQSSLPGSMRTHPEPHPNLHYMHTGLAATPVSTPLSTAVTPSATHPGSLKALPQTSQHAPTNSTLLSKQIK-----------DVSCSLDSELGCT-----PTEQVQDG-AVISENGQNEEGQKDKVDSPDQKAELKNLSTSAENLVGSLDIKGDETDNIAGIGVQS---EERQSAKDNETLCSLKGD--DPFAADSCENQSASEQQIGLVSIVGDGC-NGKQVLGKEETG 616
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: B9GN48_POPTR (Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0002s10670g PE=4 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 1.180e-107 Identity = 220/333 (66.07%), Postives = 250/333 (75.08%), Query Frame = 1 Query: 196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXX-XXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTS---AETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPD---KNLTAACTNNPGLKIMSSSAPPTAGGEASARAQSQVQQ 1173 MI+ +KK KKG ISEED+STLLQRYTATT+LALLQEVAQF G K+DWNALVKKTSTGISNAREYQMLWRHLAYR VL EK +DGA DDDSDLE ELE PSV+SE S EAAACVKVLIASGLP+DS+ N++ V+APLTINIPN RS R +SEN Q S M G NI VPVSVQK LP+V S +E + NG P RRKRKPWSEAED+ELIAAVQK G GNWA+I+RG+FKGDRTASQL+QRW +I+KR GNLNV S+ PQLSE Q A R A+ +ALD P K+L A+ K ++ A PT EAS AQ Q QQ Sbjct: 1 MIEKSKKNKKGVISEEDVSTLLQRYTATTLLALLQEVAQFDGAKIDWNALVKKTSTGISNAREYQMLWRHLAYRHVLPEKFDDGAHPLDDDDSDLESELEAFPSVTSEASTEAAACVKVLIASGLPSDSTHPNNTTVEAPLTINIPNGRSLRATSENSQ-SDVMRGVNIRVPVSVQKLSLPAVMSCPASEVYDANGSGSGTFPPRRKRKPWSEAEDMELIAAVQKLGEGNWASIVRGEFKGDRTASQLSQRWAIIRKRHGNLNVGTVSSAPQLSETQRAARDAVKMALD-PHPAAKSLIASSAGTTSTKTPNNCASPTITAEASP-AQHQSQQ 330
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A059BRG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02154 PE=4 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 4.126e-106 Identity = 208/300 (69.33%), Postives = 244/300 (81.33%), Query Frame = 1 Query: 193 TMIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVE-GNSAIPQLSEAQLATRSALSLALDMPDKNLTAACTNN 1089 +++++ +++KGSISEEDISTLLQRY+AT VL LLQEVAQF GVK+DWN LVK+TSTGI+NAREY+ LWR+LAYR L EKLEDG +PLDDDSDLEYELE P+VS+E S EAAACVKVLI SG+ +D SL ++S V+APLTINIPN +S RVS E+ QP C G NITVPVSV+K+ LP+VTS E ++ NG A N +R+KRKPWSEAEDLELIAAVQKCG GNWANIL+ DFKGDRTASQL+QRW +I+KR GNLNV NS PQLSEAQLA R A+SLALDMP KN T N Sbjct: 4 SVVESKPQKRKGSISEEDISTLLQRYSATAVLCLLQEVAQFQGVKVDWNELVKRTSTGITNAREYRTLWRYLAYRSTLPEKLEDGDEPLDDDSDLEYELEAFPAVSTEASTEAAACVKVLIGSGITSDPSLQSNSTVEAPLTINIPNGQSSRVS-ESSQPPCYTQGVNITVPVSVRKQPLPAVTSNEGLDVNGLASGNNASRKKRKPWSEAEDLELIAAVQKCGEGNWANILKADFKGDRTASQLSQRWAIIRKRHGNLNVGIANSTGPQLSEAQLAARHAVSLALDMPVKNSRTGATPN 302
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A067KZ50_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15893 PE=4 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 1.335e-105 Identity = 205/290 (70.69%), Postives = 238/290 (82.07%), Query Frame = 1 Query: 196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPDKN 1065 MI+ +KK KKG ISEEDISTLLQRYTA TVLALLQEVAQF GVK+DWN LVKKT+TGISN REYQMLWRHLAYR LL+KL DGA PLDDDSDLEYEL+ P VS+E S EAAACVKVLIASGLP+DS+ NS+ V+APLTINIPN + R +SENLQP+ M G NITVPVSVQK+ LP+VTSAE ++ NG +G+ +P RRKRKPWS++EDLELIAAVQK G GNWANILR + K DRTASQL+QRW +I+KR G N+ GN++ QL E Q A R A+++ALD P KN Sbjct: 1 MIEKSKKPKKGIISEEDISTLLQRYTANTVLALLQEVAQFEGVKIDWNELVKKTTTGISNVREYQMLWRHLAYRHALLDKLHDGAQPLDDDSDLEYELDVFPDVSTEASTEAAACVKVLIASGLPSDSTHPNSTTVEAPLTINIPNGKPCRFTSENLQPAI-MKGVNITVPVSVQKQPLPAVTSAEGLDANG-SGSGVP-RRKRKPWSDSEDLELIAAVQKYGEGNWANILRSEVKWDRTASQLSQRWAIIRKRQGTSNLGGNTSSVQLIEEQRAARHAMNMALDPPVKN 287
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A0D2R5P8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G139100 PE=4 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 2.734e-102 Identity = 186/197 (94.42%), Postives = 188/197 (95.43%), Query Frame = -2 Query: 2653 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGKMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKELXXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKKSLQKQLS 3243 FWLRFSTSIHQIQKYQTSVKDL AELSKLREKIHQEGSGGKMKSE PIFSHLREIKTEL LWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMK EI KVGDELNAGFTRAGQLKQEVEKITADLEKELSSSTSSQ QSK WQ R+P+QSFLFGIKFKNRRKTKKSLQKQLS Sbjct: 675 FWLRFSTSIHQIQKYQTSVKDLTAELSKLREKIHQEGSGGKMKSEARPIFSHLREIKTELILWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKHEINKVGDELNAGFTRAGQLKQEVEKITADLEKELSSSTSSQSQSKPWQHRIPLQSFLFGIKFKNRRKTKKSLQKQLS 871
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: M5XIL2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027142mg PE=4 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 3.591e-102 Identity = 199/298 (66.78%), Postives = 235/298 (78.86%), Query Frame = 1 Query: 196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVT-----SAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPDKNLTA 1074 M++ TK KK SI+EED +TLLQRYTATTVLALLQEVA +P K+DW LV KTSTGISNAREYQMLWRHLAYR+ L++K ++G+ PLDDDSDLEYELE P+V E S EAAACVKVLIASGLP+DSS N + V+APLTINIPN + R + EN +P+CSM G NITVPVSV+K+ LPS T +A+ + NG A ++ R+KRK WSEAED ELIAAVQKCG GNWANILR DFKGDRTA QL+QRW +IKKR LN+ GNS+ +LSEAQLA R +LS+AL+MP NLTA Sbjct: 1 MVEKTKDPKKCSITEEDTATLLQRYTATTVLALLQEVAHWPEAKIDWIRLVAKTSTGISNAREYQMLWRHLAYREALVDKFDNGSQPLDDDSDLEYELEAFPAVCGEASTEAAACVKVLIASGLPSDSSHRNGTTVEAPLTINIPNGQPSR-THENSEPTCSMQGKNITVPVSVKKQPLPSATTSSVATADGGDANGSASNSMAPRKKRKKWSEAEDFELIAAVQKCGEGNWANILRADFKGDRTAGQLSQRWAIIKKRNQELNLGGNSS-GKLSEAQLAARHSLSVALNMP--NLTA 294
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: K4DGL8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc12g087970.1 PE=4 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 3.955e-95 Identity = 198/331 (59.82%), Postives = 243/331 (73.41%), Query Frame = 1 Query: 196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPDKNLTAACTNNPGLKIMSSSAPPTAGGEASARAQSQVQQGPLAS 1188 M + KKQK ISEEDI+ LLQRY+ +TVLA+L+EV Q K+DWN +V+K++TGI+NAREYQMLWRHLAYR L++K +D A PLDDDSDLE+ELE P+VSSE SAEAAA K+LIASG PND+++ N S ++APLTINIPN ++ R +N SM GTNITVPV+VQK+ L +V +AE ++ +GP NLP RRKRKPWSEAED+ELIAAVQKCG GNWANIL+GDFKGDRTASQL+QRW +I+KR G + G+ QLSEAQLA R A+S AL+MP A S+S+ P AS AQSQ QQ PL+S Sbjct: 1 MFEKMKKQK-CFISEEDIAILLQRYSVSTVLAILREVGQVADEKIDWNVMVRKSTTGITNAREYQMLWRHLAYRHDLIDKFDDEAQPLDDDSDLEFELEAFPAVSSEASAEAAASAKMLIASGAPNDANMLNGSTIEAPLTINIPNGQTSRTGMDNSFQGTSMHGTNITVPVAVQKQPLSTVVAAEGLDTHGPGCTNLPPRRKRKPWSEAEDVELIAAVQKCGEGNWANILKGDFKGDRTASQLSQRWAIIRKRQGTMVGNGS----QLSEAQLAARHAMSHALNMP----IGASVGPNSGGGSSNSSLPVTADLASGGAQSQHQQDPLSS 322
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: W1PFC1_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00016p00255950 PE=4 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 2.010e-91 Identity = 192/283 (67.84%), Postives = 224/283 (79.15%), Query Frame = 1 Query: 217 QKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIP-NARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLN--VEGNSAIPQLSEAQLATRSALSLALDMP 1056 +KKG ISEED S LLQRYTATT+LALLQEVAQF G K+DWN LVKKTSTGISNAREYQMLWRHLAYR L EKLED A+P+DDDSDLE+E+E P+ S+E AEA ACVKVLIAS P S N ++++APLTIN+P NA++ SEN SC+ GTNITVPVSVQK+ LP+VTSAE + NG AG LP RRKRKPW+ ED ELIAAVQKCG GNWANIL+GDFK DRTASQL+QRW++IKK+ N + V G+S L+EAQ ATR A+S+AL+MP Sbjct: 36 KKKGLISEEDASLLLQRYTATTILALLQEVAQFAGPKVDWNVLVKKTSTGISNAREYQMLWRHLAYRTALAEKLEDDAEPMDDDSDLEFEVEASPTPSNEALAEATACVKVLIASSDPGPS---NRTIIEAPLTINVPNNAQTLPAQSENRNSSCTGQGTNITVPVSVQKQPLPTVTSAEGLNSNGVAG--LP-RRKRKPWTSEEDKELIAAVQKCGEGNWANILKGDFKHDRTASQLSQRWSIIKKKQANSDSKVGGSSNSSALTEAQQATRQAVSIALNMP 312
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A0A0LLS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G370470 PE=4 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 6.439e-91 Identity = 179/278 (64.39%), Postives = 218/278 (78.42%), Query Frame = 1 Query: 214 KQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLAL 1047 K KK S++E+D S+LL+RY+ TTVLALLQEVAQ P K+DWN LVK TSTGISN REYQMLWRHLAYR LL+ LED PL+DDSDLE +LEP PSVS ET EAAAC KV I+SG P+D ++ NSS+++APLTI++P + + V EN+ P+CS+ G ITVPVSVQ++ + + SAE + NGP N +RRKRKPWSEAEDLEL+AAV+KCG GNWANI+RGDF DRTASQL+QRW +IKK+ GNLNV N+A QLSE QLA R A+S+AL Sbjct: 2 KLKKQSVTEKDFSSLLRRYSPTTVLALLQEVAQAPDAKIDWNDLVKNTSTGISNPREYQMLWRHLAYRHALLDDLEDEKAPLEDDSDLECDLEPFPSVSCETLTEAAACAKVFISSGSPSDLNVPNSSIIEAPLTISLPRSYTDGVQFENVDPACSVKGAIITVPVSVQRQPVLAPPSAEGLNTNGPTYGNNASRRKRKPWSEAEDLELMAAVKKCGEGNWANIIRGDFLSDRTASQLSQRWAIIKKKHGNLNVGVNTAGTQLSEVQLAARHAMSVAL 279
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A068UV46_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_55 OS=Coffea canephora GN=GSCOC_T00033796001 PE=4 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 7.997e-86 Identity = 186/288 (64.58%), Postives = 217/288 (75.35%), Query Frame = 1 Query: 196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXX-XXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMP 1056 M + +KK +K ++EED STLLQRYTATTVL LLQEVAQ K+DWN LVKK+ TGISN REYQMLWRHLAYRD LL++L+D A LDDDSDLE +LE P+VS+E AEAAACVKVLIASG P+D N V+APLTINIP + R + EN + GTNITVPVSVQK LPSV SAE ++ NG A ANLP RRKRK W++ ED EL+AAV+K G GNWANIL+GDFK DRTASQL+QRW +IKKR GN+ + S QLSE QLA R A+SLAL+MP Sbjct: 1 MGEKSKKPRKNFVTEEDFSTLLQRYTATTVLTLLQEVAQVQDSKIDWNVLVKKSKTGISNPREYQMLWRHLAYRDALLDRLDDAAAQPLDDDSDLECDLEAFPAVSNEALAEAAACVKVLIASG-PSD---PNGLTVEAPLTINIPKGQPSR-APENSHCNVFAQGTNITVPVSVQKPSLPSVASAEALDSNGAANANLP-RRKRKAWTDVEDQELMAAVRKFGEGNWANILKGDFKSDRTASQLSQRWAIIKKRKGNVTLGTGS---QLSEVQLAARRAVSLALNMP 279 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 5
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097850 ID=g.barbadense_cottongen_reftransV1_0097850; Name=g.barbadense_cottongen_reftransV1_0097850; organism=Gossypium barbadense; type=contig; length=3244bpback to top |