g.barbadense_cottongen_reftransV1_0097850, g.barbadense_cottongen_reftransV1_0097850 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097850
Unique Nameg.barbadense_cottongen_reftransV1_0097850
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3244
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At01chromosomeg.barbadense_cottongen_reftransV1_0097850:1..3244 .
At01:36609527..36615279 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2A_ARATH (Protein NETWORKED 2A OS=Arabidopsis thaliana GN=NET2A PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.765e-51
Identity = 118/229 (51.53%), Postives = 150/229 (65.50%), Query Frame = -2
Query: 2638 FWLRFSTSIHQIQKYQTSVKDLKAELSKLR--EKIHQEG----SGGKMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVT--NATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKEL------XXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKKS-------------LQKQLSYIIEP 3243
            FWLRFSTS+HQIQKYQT+V+DLK+ELSKLR   K  QE     S   + SE  PI+ HLREI+TEL LWLEN+ VLKDE+Q R+ SL N Q+EIARVT  +  N+  ++ IS YQAAKF GE+LNMKQE K+V  EL++G  R   LK EVE+I + LE++L       + T+    S S +PR+P++SFLFG+K K  R+ K+S             L KQ SY   P
Sbjct:  714 FWLRFSTSVHQIQKYQTTVQDLKSELSKLRIESKQQQESPRSSSNTAVASEAKPIYRHLREIRTELQLWLENSAVLKDELQGRYASLANIQEEIARVTAQSGGNKVSDSEISGYQAAKFHGEILNMKQENKRVSTELHSGLDRVRALKTEVERILSKLEEDLGISSATEARTTPSKSSSSGRPRIPLRSFLFGVKLKKNRQQKQSASSLFSCVSPSPGLHKQSSYSRPP 942          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2B_ARATH (Protein NETWORKED 2B OS=Arabidopsis thaliana GN=NET2B PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.607e-50
Identity = 111/229 (48.47%), Postives = 149/229 (65.07%), Query Frame = -2
Query: 2638 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGK-----MKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGR--ETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKEL-------XXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKK-------------SLQKQLSYIIEP 3243
            FWLRFSTS+HQIQKY TSV+DLKAELSK+  K  Q+G+ G      + SE  PI+ HLREI+TEL LWLEN+ +L+DE++ R+ +LCN +DE++RVT+ +       T I  YQAAKF GE+LNMKQE K+V +EL AG  RA  L+ EVE++   LE+ L       + S S +  S + +PR+P++SFLFG+K K  ++  K             +L KQ SYII P
Sbjct:  692 FWLRFSTSVHQIQKYHTSVQDLKAELSKIESK--QQGNAGSSSNTALASEAKPIYRHLREIRTELQLWLENSAILRDELEGRYATLCNIKDEVSRVTSQSGATEVSNTEIRGYQAAKFHGEILNMKQENKRVFNELQAGLDRARALRAEVERVVCKLEENLGILDGTATRSLSKRMPSSAGKPRIPLRSFLFGVKLKKYKQQPKQTSTIFSCVSPSPALNKQCSYIIPP 918          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2D_ARATH (Protein NETWORKED 2D OS=Arabidopsis thaliana GN=NET2D PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.578e-38
Identity = 89/191 (46.60%), Postives = 118/191 (61.78%), Query Frame = -2
Query: 2695 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGK---MKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKELXXXXXXXXXX-----XXXQPRVPMQSFLFGIKFK 3243
            FWLRFST+  QIQ Y TS++DL+AE+SKL ++  Q+GS      ++S+V P++ HLREI T+L LWLE    LK+E++ R  SLCN QDEI +   ++    +   + YQAAKFQGEVLNMKQE  KV DEL AG      L+ EV+K    L  E + S S             + RVP++SF+FG K K
Sbjct:  735 FWLRFSTAFGQIQSYDTSIEDLQAEISKLEQRRKQDGSSTAKYALRSDVRPLYVHLREINTDLGLWLEKGAALKEELKSRFESLCNIQDEITKALKSSAEDDDFRFTSYQAAKFQGEVLNMKQENNKVADELQAGLDHITTLQLEVDKTLGKLIDEFALSGSKNKSDLDLQHSDSRSRVPLRSFIFGSKQK 925          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: KIP1_PETIN (Kinase-interacting protein 1 OS=Petunia integrifolia GN=KIP1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.362e-37
Identity = 87/190 (45.79%), Postives = 126/190 (66.32%), Query Frame = -2
Query: 2680 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGG-KMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKEL-XXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKT 3243
            FWLRFS++ HQIQK++T+V DL+ E+SK R+K  Q  S    +KSE+ P++ H++EI+ ELT+WLE    LKDE++ R  +LC+ Q+EI++         ET  S +QAAKFQGEVLNMK E KKV +EL AG +R   L+++VEK    L++E   +   SQ      + R+P+QSF+FG K K  +++
Sbjct:  775 FWLRFSSAFHQIQKFKTTVHDLQNEISKARDKEMQGNSPRVDVKSEIRPLYKHMKEIQNELTVWLEQTLSLKDELERRFSALCSIQEEISKGLKEEVED-ETTFSSHQAAKFQGEVLNMKHENKKVREELEAGISRVTILQEDVEKTVTQLDQEFGLTGNQSQLMQSVSKSRIPLQSFIFGTKPKKEKRS 963          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Match: NET2C_ARATH (Protein NETWORKED 2C OS=Arabidopsis thaliana GN=NET2C PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.332e-25
Identity = 73/208 (35.10%), Postives = 122/208 (58.65%), Query Frame = -2
Query: 2623 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGKMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKELXXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKKS-LQKQLSYIIEPKEPSG 3243
              +RFS S  +IQ++ T +KDL  E+ K+ ++ +Q+G    ++S V PI+ HL EI+TE+T+WLE + +LK+E+  R  +L +  +EI       +   E   + YQ AKF+GEV NMK+E  ++ +EL  G  +  +L ++ +     L +E  S + S  QS   + R+P++SF+F  K K +R +  S +Q  LS +   K+P+G
Sbjct:  644 LLVRFSNSFGKIQQFDTGIKDLHGEMLKIIKQKNQDGGKNTLRSNVRPIYKHLSEIRTEMTVWLEKSLLLKEEINIRASTLSDIHNEITEALKTDSEDSEIKFTIYQGAKFEGEVSNMKKENNRIAEELQTGLDQVTKLMKDADTTLEKLSEEF-SLSESNTQSSQDRSRIPLRSFIFDRKPKKQRLSLFSCIQPSLSKM---KKPAG 847          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: M5XCP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002943mg PE=4 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 3.160e-115
Identity = 304/695 (43.74%), Postives = 401/695 (57.70%), Query Frame = 1
Query:  196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVT-----SAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCG-NLNVEGNSAIPQLSEAQLATRSALSLALDMPDKNLTAACTNNPGLKIMSSSAPPTAGGEASARAQSQVQQGPLASVEAPIQSQQGPIASVSSRNRSQEGPITSASPQNPSQQGPVASVQVPNQSQQGSMPTKTSPRGSSGSTLKSRVTLKKAPAKPFSTTGSILDATAVAAGARIGSPEXXXXXXXXXXXXXXIHIMTTAGSSVKPVIPSGTSS--------QYVCTGLTAEAHSSP----VTSSTLHPGSVKTATQRVEHTSSVSLSINAPMQQCNAVTSGTAVEVSPKEDLEIKGSVSDSLPKEQVRENRAYVSKNERGEEVKEHKEALTNPGSELRNIVAEAEHPNEKLMVDGDQ------VGVKANPVEESVNASDSKDCLLVKKSTTQPTAEESCRNHSMTEMP-AKASSLSDGCAKNLEVLSTAETG 2205
            M++ TK  +K  I+EED + LLQRY A  VL LLQEVA    VK+DWN LV+KTSTGISNAREYQMLWRHLAY +  ++  ++GA P+DDDSDLE+ELE  P+V  E S EAAACVKVL+ASGLP+DS+  + + V+APLTINIPN +  R + +N QP CSM G NITVPVSVQK+ L ++T     +AE  + NG A  N+  R+KRK WSEAEDLELIA V++ G GNWANILRGDFKG+RTA+QL+QRW  I+K    +LNV GNS+  +LSEAQLATR A+SLAL+MP  ++TA      G    S        G  +A   S     P  + E  +QSQQG                    P  P Q G +                        GST KS++T KK   KP S T  ++ ATAVAAGARI SP  AASLLKAAQ+KNA+H++ T GSS++  +P    +         Y+ TGL A   S+P    VT S  HPGS+K   Q  +H  + S  ++  ++           +VS   D E+  +     P EQV++  A +S+N + EE ++ K    +  +EL+N+   AE+    L + GD+      +GV++   EE  +A D++    +K     P A +SC N S +E      S + DGC    +VL   ETG
Sbjct:    1 MVEKTKDPEKSYITEEDTANLLQRYQAANVLHLLQEVAHSQDVKIDWNRLVEKTSTGISNAREYQMLWRHLAYSEAFVDNFDNGAQPVDDDSDLEHELEAFPAVIGEDSTEAAACVKVLMASGLPSDSTHRSGATVEAPLTINIPNGQPSR-THQNSQPPCSMQGMNITVPVSVQKQPLLAMTTSTGATAEGGDANGSASNNMAPRKKRKKWSEAEDLELIAGVRRYGEGNWANILRGDFKGERTANQLSQRWKYIRKHHHQDLNVGGNSS-NKLSEAQLATRHAMSLALNMP--SITANTIGTAGTNTHSKF------GGTNATTNSL----PSTAAEEELQSQQG------------------LKPAKPYQMGLL------------------------GSTSKSQLTSKKTLTKPNSNTDGMVRATAVAAGARIASPSDAASLLKAAQAKNAVHVLPTGGSSIQSSLPGSMRTHPEPHPNLHYMHTGLAATPVSTPLSTAVTPSATHPGSLKALPQTSQHAPTNSTLLSKQIK-----------DVSCSLDSELGCT-----PTEQVQDG-AVISENGQNEEGQKDKVDSPDQKAELKNLSTSAENLVGSLDIKGDETDNIAGIGVQS---EERQSAKDNETLCSLKGD--DPFAADSCENQSASEQQIGLVSIVGDGC-NGKQVLGKEETG 616          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: B9GN48_POPTR (Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0002s10670g PE=4 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 1.180e-107
Identity = 220/333 (66.07%), Postives = 250/333 (75.08%), Query Frame = 1
Query:  196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXX-XXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTS---AETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPD---KNLTAACTNNPGLKIMSSSAPPTAGGEASARAQSQVQQ 1173
            MI+ +KK KKG ISEED+STLLQRYTATT+LALLQEVAQF G K+DWNALVKKTSTGISNAREYQMLWRHLAYR VL EK +DGA    DDDSDLE ELE  PSV+SE S EAAACVKVLIASGLP+DS+  N++ V+APLTINIPN RS R +SEN Q S  M G NI VPVSVQK  LP+V S   +E  + NG      P RRKRKPWSEAED+ELIAAVQK G GNWA+I+RG+FKGDRTASQL+QRW +I+KR GNLNV   S+ PQLSE Q A R A+ +ALD P    K+L A+       K  ++ A PT   EAS  AQ Q QQ
Sbjct:    1 MIEKSKKNKKGVISEEDVSTLLQRYTATTLLALLQEVAQFDGAKIDWNALVKKTSTGISNAREYQMLWRHLAYRHVLPEKFDDGAHPLDDDDSDLESELEAFPSVTSEASTEAAACVKVLIASGLPSDSTHPNNTTVEAPLTINIPNGRSLRATSENSQ-SDVMRGVNIRVPVSVQKLSLPAVMSCPASEVYDANGSGSGTFPPRRKRKPWSEAEDMELIAAVQKLGEGNWASIVRGEFKGDRTASQLSQRWAIIRKRHGNLNVGTVSSAPQLSETQRAARDAVKMALD-PHPAAKSLIASSAGTTSTKTPNNCASPTITAEASP-AQHQSQQ 330          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A059BRG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02154 PE=4 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 4.126e-106
Identity = 208/300 (69.33%), Postives = 244/300 (81.33%), Query Frame = 1
Query:  193 TMIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVE-GNSAIPQLSEAQLATRSALSLALDMPDKNLTAACTNN 1089
            +++++  +++KGSISEEDISTLLQRY+AT VL LLQEVAQF GVK+DWN LVK+TSTGI+NAREY+ LWR+LAYR  L EKLEDG +PLDDDSDLEYELE  P+VS+E S EAAACVKVLI SG+ +D SL ++S V+APLTINIPN +S RVS E+ QP C   G NITVPVSV+K+ LP+VTS E ++ NG A  N  +R+KRKPWSEAEDLELIAAVQKCG GNWANIL+ DFKGDRTASQL+QRW +I+KR GNLNV   NS  PQLSEAQLA R A+SLALDMP KN     T N
Sbjct:    4 SVVESKPQKRKGSISEEDISTLLQRYSATAVLCLLQEVAQFQGVKVDWNELVKRTSTGITNAREYRTLWRYLAYRSTLPEKLEDGDEPLDDDSDLEYELEAFPAVSTEASTEAAACVKVLIGSGITSDPSLQSNSTVEAPLTINIPNGQSSRVS-ESSQPPCYTQGVNITVPVSVRKQPLPAVTSNEGLDVNGLASGNNASRKKRKPWSEAEDLELIAAVQKCGEGNWANILKADFKGDRTASQLSQRWAIIRKRHGNLNVGIANSTGPQLSEAQLAARHAVSLALDMPVKNSRTGATPN 302          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A067KZ50_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15893 PE=4 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 1.335e-105
Identity = 205/290 (70.69%), Postives = 238/290 (82.07%), Query Frame = 1
Query:  196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPDKN 1065
            MI+ +KK KKG ISEEDISTLLQRYTA TVLALLQEVAQF GVK+DWN LVKKT+TGISN REYQMLWRHLAYR  LL+KL DGA PLDDDSDLEYEL+  P VS+E S EAAACVKVLIASGLP+DS+  NS+ V+APLTINIPN +  R +SENLQP+  M G NITVPVSVQK+ LP+VTSAE ++ NG +G+ +P RRKRKPWS++EDLELIAAVQK G GNWANILR + K DRTASQL+QRW +I+KR G  N+ GN++  QL E Q A R A+++ALD P KN
Sbjct:    1 MIEKSKKPKKGIISEEDISTLLQRYTANTVLALLQEVAQFEGVKIDWNELVKKTTTGISNVREYQMLWRHLAYRHALLDKLHDGAQPLDDDSDLEYELDVFPDVSTEASTEAAACVKVLIASGLPSDSTHPNSTTVEAPLTINIPNGKPCRFTSENLQPAI-MKGVNITVPVSVQKQPLPAVTSAEGLDANG-SGSGVP-RRKRKPWSDSEDLELIAAVQKYGEGNWANILRSEVKWDRTASQLSQRWAIIRKRQGTSNLGGNTSSVQLIEEQRAARHAMNMALDPPVKN 287          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A0D2R5P8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G139100 PE=4 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 2.734e-102
Identity = 186/197 (94.42%), Postives = 188/197 (95.43%), Query Frame = -2
Query: 2653 FWLRFSTSIHQIQKYQTSVKDLKAELSKLREKIHQEGSGGKMKSEVCPIFSHLREIKTELTLWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKQEIKKVGDELNAGFTRAGQLKQEVEKITADLEKELXXXXXXXXXXXXXQPRVPMQSFLFGIKFKNRRKTKKSLQKQLS 3243
            FWLRFSTSIHQIQKYQTSVKDL AELSKLREKIHQEGSGGKMKSE  PIFSHLREIKTEL LWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMK EI KVGDELNAGFTRAGQLKQEVEKITADLEKELSSSTSSQ QSK WQ R+P+QSFLFGIKFKNRRKTKKSLQKQLS
Sbjct:  675 FWLRFSTSIHQIQKYQTSVKDLTAELSKLREKIHQEGSGGKMKSEARPIFSHLREIKTELILWLENNEVLKDEVQDRHFSLCNFQDEIARVTNATNRGRETGISEYQAAKFQGEVLNMKHEINKVGDELNAGFTRAGQLKQEVEKITADLEKELSSSTSSQSQSKPWQHRIPLQSFLFGIKFKNRRKTKKSLQKQLS 871          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: M5XIL2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027142mg PE=4 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 3.591e-102
Identity = 199/298 (66.78%), Postives = 235/298 (78.86%), Query Frame = 1
Query:  196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVT-----SAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPDKNLTA 1074
            M++ TK  KK SI+EED +TLLQRYTATTVLALLQEVA +P  K+DW  LV KTSTGISNAREYQMLWRHLAYR+ L++K ++G+ PLDDDSDLEYELE  P+V  E S EAAACVKVLIASGLP+DSS  N + V+APLTINIPN +  R + EN +P+CSM G NITVPVSV+K+ LPS T     +A+  + NG A  ++  R+KRK WSEAED ELIAAVQKCG GNWANILR DFKGDRTA QL+QRW +IKKR   LN+ GNS+  +LSEAQLA R +LS+AL+MP  NLTA
Sbjct:    1 MVEKTKDPKKCSITEEDTATLLQRYTATTVLALLQEVAHWPEAKIDWIRLVAKTSTGISNAREYQMLWRHLAYREALVDKFDNGSQPLDDDSDLEYELEAFPAVCGEASTEAAACVKVLIASGLPSDSSHRNGTTVEAPLTINIPNGQPSR-THENSEPTCSMQGKNITVPVSVKKQPLPSATTSSVATADGGDANGSASNSMAPRKKRKKWSEAEDFELIAAVQKCGEGNWANILRADFKGDRTAGQLSQRWAIIKKRNQELNLGGNSS-GKLSEAQLAARHSLSVALNMP--NLTA 294          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: K4DGL8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc12g087970.1 PE=4 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 3.955e-95
Identity = 198/331 (59.82%), Postives = 243/331 (73.41%), Query Frame = 1
Query:  196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMPDKNLTAACTNNPGLKIMSSSAPPTAGGEASARAQSQVQQGPLAS 1188
            M +  KKQK   ISEEDI+ LLQRY+ +TVLA+L+EV Q    K+DWN +V+K++TGI+NAREYQMLWRHLAYR  L++K +D A PLDDDSDLE+ELE  P+VSSE SAEAAA  K+LIASG PND+++ N S ++APLTINIPN ++ R   +N     SM GTNITVPV+VQK+ L +V +AE ++ +GP   NLP RRKRKPWSEAED+ELIAAVQKCG GNWANIL+GDFKGDRTASQL+QRW +I+KR G +   G+    QLSEAQLA R A+S AL+MP      A          S+S+ P     AS  AQSQ QQ PL+S
Sbjct:    1 MFEKMKKQK-CFISEEDIAILLQRYSVSTVLAILREVGQVADEKIDWNVMVRKSTTGITNAREYQMLWRHLAYRHDLIDKFDDEAQPLDDDSDLEFELEAFPAVSSEASAEAAASAKMLIASGAPNDANMLNGSTIEAPLTINIPNGQTSRTGMDNSFQGTSMHGTNITVPVAVQKQPLSTVVAAEGLDTHGPGCTNLPPRRKRKPWSEAEDVELIAAVQKCGEGNWANILKGDFKGDRTASQLSQRWAIIRKRQGTMVGNGS----QLSEAQLAARHAMSHALNMP----IGASVGPNSGGGSSNSSLPVTADLASGGAQSQHQQDPLSS 322          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: W1PFC1_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00016p00255950 PE=4 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.010e-91
Identity = 192/283 (67.84%), Postives = 224/283 (79.15%), Query Frame = 1
Query:  217 QKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIP-NARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLN--VEGNSAIPQLSEAQLATRSALSLALDMP 1056
            +KKG ISEED S LLQRYTATT+LALLQEVAQF G K+DWN LVKKTSTGISNAREYQMLWRHLAYR  L EKLED A+P+DDDSDLE+E+E  P+ S+E  AEA ACVKVLIAS  P  S   N ++++APLTIN+P NA++    SEN   SC+  GTNITVPVSVQK+ LP+VTSAE +  NG AG  LP RRKRKPW+  ED ELIAAVQKCG GNWANIL+GDFK DRTASQL+QRW++IKK+  N +  V G+S    L+EAQ ATR A+S+AL+MP
Sbjct:   36 KKKGLISEEDASLLLQRYTATTILALLQEVAQFAGPKVDWNVLVKKTSTGISNAREYQMLWRHLAYRTALAEKLEDDAEPMDDDSDLEFEVEASPTPSNEALAEATACVKVLIASSDPGPS---NRTIIEAPLTINVPNNAQTLPAQSENRNSSCTGQGTNITVPVSVQKQPLPTVTSAEGLNSNGVAG--LP-RRKRKPWTSEEDKELIAAVQKCGEGNWANILKGDFKHDRTASQLSQRWSIIKKKQANSDSKVGGSSNSSALTEAQQATRQAVSIALNMP 312          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A0A0LLS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G370470 PE=4 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.439e-91
Identity = 179/278 (64.39%), Postives = 218/278 (78.42%), Query Frame = 1
Query:  214 KQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXXXXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLAL 1047
            K KK S++E+D S+LL+RY+ TTVLALLQEVAQ P  K+DWN LVK TSTGISN REYQMLWRHLAYR  LL+ LED   PL+DDSDLE +LEP PSVS ET  EAAAC KV I+SG P+D ++ NSS+++APLTI++P + +  V  EN+ P+CS+ G  ITVPVSVQ++ + +  SAE +  NGP   N  +RRKRKPWSEAEDLEL+AAV+KCG GNWANI+RGDF  DRTASQL+QRW +IKK+ GNLNV  N+A  QLSE QLA R A+S+AL
Sbjct:    2 KLKKQSVTEKDFSSLLRRYSPTTVLALLQEVAQAPDAKIDWNDLVKNTSTGISNPREYQMLWRHLAYRHALLDDLEDEKAPLEDDSDLECDLEPFPSVSCETLTEAAACAKVFISSGSPSDLNVPNSSIIEAPLTISLPRSYTDGVQFENVDPACSVKGAIITVPVSVQRQPVLAPPSAEGLNTNGPTYGNNASRRKRKPWSEAEDLELMAAVKKCGEGNWANIIRGDFLSDRTASQLSQRWAIIKKKHGNLNVGVNTAGTQLSEVQLAARHAMSVAL 279          
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Match: A0A068UV46_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_55 OS=Coffea canephora GN=GSCOC_T00033796001 PE=4 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 7.997e-86
Identity = 186/288 (64.58%), Postives = 217/288 (75.35%), Query Frame = 1
Query:  196 MIQNTKKQKKGSISEEDISTLLQRYTATTVLALLQEVAQFPGVKLDWNALVKKTSTGISNAREYQMLWRHLAYRDVLLEKXXXXXXX-XXXXXXXXXXXXPCPXXXXXXXXXXXXCVKVLIASGLPNDSSLANSSMVDAPLTINIPNARSFRVSSENLQPSCSMPGTNITVPVSVQKKILPSVTSAETMEGNGPAGANLPARRKRKPWSEAEDLELIAAVQKCGVGNWANILRGDFKGDRTASQLAQRWTVIKKRCGNLNVEGNSAIPQLSEAQLATRSALSLALDMP 1056
            M + +KK +K  ++EED STLLQRYTATTVL LLQEVAQ    K+DWN LVKK+ TGISN REYQMLWRHLAYRD LL++L+D A   LDDDSDLE +LE  P+VS+E  AEAAACVKVLIASG P+D    N   V+APLTINIP  +  R + EN   +    GTNITVPVSVQK  LPSV SAE ++ NG A ANLP RRKRK W++ ED EL+AAV+K G GNWANIL+GDFK DRTASQL+QRW +IKKR GN+ +   S   QLSE QLA R A+SLAL+MP
Sbjct:    1 MGEKSKKPRKNFVTEEDFSTLLQRYTATTVLTLLQEVAQVQDSKIDWNVLVKKSKTGISNPREYQMLWRHLAYRDALLDRLDDAAAQPLDDDSDLECDLEAFPAVSNEALAEAAACVKVLIASG-PSD---PNGLTVEAPLTINIPKGQPSR-APENSHCNVFAQGTNITVPVSVQKPSLPSVASAEALDSNGAANANLP-RRKRKAWTDVEDQELMAAVRKFGEGNWANILKGDFKSDRTASQLSQRWAIIKKRKGNVTLGTGS---QLSEVQLAARRAVSLALNMP 279          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
NET2A_ARATH1.765e-5151.53Protein NETWORKED 2A OS=Arabidopsis thaliana GN=NE... [more]
NET2B_ARATH2.607e-5048.47Protein NETWORKED 2B OS=Arabidopsis thaliana GN=NE... [more]
NET2D_ARATH1.578e-3846.60Protein NETWORKED 2D OS=Arabidopsis thaliana GN=NE... [more]
KIP1_PETIN3.362e-3745.79Kinase-interacting protein 1 OS=Petunia integrifol... [more]
NET2C_ARATH1.332e-2535.10Protein NETWORKED 2C OS=Arabidopsis thaliana GN=NE... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0097850 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M5XCP6_PRUPE3.160e-11543.74Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9GN48_POPTR1.180e-10766.07Myb family transcription factor family protein OS=... [more]
A0A059BRG1_EUCGR4.126e-10669.33Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A067KZ50_JATCU1.335e-10570.69Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A0D2R5P8_GOSRA2.734e-10294.42Uncharacterized protein OS=Gossypium raimondii GN=... [more]
M5XIL2_PRUPE3.591e-10266.78Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
K4DGL8_SOLLC3.955e-9559.82Uncharacterized protein OS=Solanum lycopersicum GN... [more]
W1PFC1_AMBTC2.010e-9167.84Uncharacterized protein OS=Amborella trichopoda GN... [more]
A0A0A0LLS9_CUCSA6.439e-9164.39Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
A0A068UV46_COFCA7.997e-8664.58Coffea canephora DH200=94 genomic scaffold, scaffo... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 203..254
e-value: 5.4E-11
score: 52.5
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 204..249
e-value: 3.9E-7
score: 30.0
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 200..252
e-value: 3.1E-12
score: 45.6
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 201..257
NoneNo IPR availablePANTHERPTHR21717:SF20DNA BINDING PROTEINcoord: 6..379
NoneNo IPR availablePANTHERPTHR21717TELOMERIC REPEAT BINDING PROTEINcoord: 6..379
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 199..256
score: 13.342

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097850 ID=g.barbadense_cottongen_reftransV1_0097850; Name=g.barbadense_cottongen_reftransV1_0097850; organism=Gossypium barbadense; type=contig; length=3244bp
CACTTCTATACACGCCTATCCTTTTCTTCTTCTTCTCCTTCTTCTTCCCT
CTCTCTCTCTCTGTCTCTTTCTGCTTTCAAAGGGTTTTAGTAGGTGCTTT
CCCTTTTTCTTAAACCCTACCTAGGGTTTTCACAAACTCCCAATTCAACT
TCTTTTTTCTTTAATTACCCTGCAATTTTCCACCAATCAACAACTATGAT
TCAAAATACCAAGAAACAGAAAAAAGGTTCAATTAGTGAGGAAGATATCT
CTACTCTTTTACAAAGGTATACAGCAACTACTGTTTTGGCACTGTTGCAA
GAAGTTGCGCAATTTCCTGGGGTAAAGTTGGATTGGAATGCTTTAGTCAA
GAAGACTTCTACTGGCATTTCGAATGCGAGAGAGTACCAGATGTTGTGGC
GCCATTTGGCCTACAGAGACGTTTTGCTTGAAAAATTGGAAGATGGGGCT
GATCCCTTGGATGATGACAGCGACTTAGAATATGAATTGGAACCTTGCCC
TTCTGTTAGTAGTGAAACTTCAGCAGAGGCTGCTGCATGTGTGAAGGTAC
TGATTGCTTCTGGTTTGCCAAATGACTCAAGTCTTGCAAATAGCTCAATG
GTGGATGCTCCATTAACAATAAATATACCTAATGCGAGGTCATTTAGAGT
GTCTTCAGAAAATTTGCAGCCCAGTTGCTCAATGCCAGGGACGAACATTA
CTGTTCCAGTTTCTGTTCAGAAAAAGATTCTACCTTCAGTGACATCGGCT
GAAACAATGGAAGGAAATGGACCAGCTGGTGCAAACCTGCCTGCTCGCAG
GAAAAGAAAACCTTGGTCAGAAGCAGAGGATTTGGAACTTATTGCTGCTG
TGCAGAAATGCGGTGTTGGGAATTGGGCAAACATCTTACGAGGAGACTTC
AAGGGAGATAGGACTGCTTCACAGTTGGCTCAGAGGTGGACTGTTATTAA
GAAGCGATGTGGCAACTTAAATGTGGAAGGAAACTCAGCAATTCCCCAGC
TTTCTGAGGCACAGTTGGCAACTCGTAGTGCCTTGTCTTTAGCCCTTGAT
ATGCCAGATAAAAATTTAACTGCTGCTTGTACAAATAACCCTGGTTTGAA
GATCATGTCCAGCTCTGCACCTCCAACTGCTGGTGGTGAAGCTTCTGCTC
GAGCCCAAAGCCAGGTCCAACAAGGTCCCCTTGCTTCTGTTGAAGCCCCA
ATTCAGTCTCAACAAGGCCCTATTGCTTCTGTCTCATCCCGTAATCGATC
TCAAGAGGGTCCTATTACTTCTGCATCTCCCCAAAATCCATCCCAGCAAG
GTCCTGTTGCTTCAGTCCAAGTCCCAAATCAGTCTCAACAAGGTTCCATG
CCTACAAAAACCTCCCCCAGGGGATCATCTGGTTCTACTTTGAAATCTCG
GGTTACCTTGAAAAAGGCCCCAGCAAAACCTTTTTCCACCACAGGTTCGA
TCCTAGATGCCACTGCAGTTGCTGCTGGGGCACGCATTGGTAGCCCAGAG
GCTGCTGCATCACTGCTGAAGGCTGCTCAATCCAAAAATGCTATTCATAT
TATGACTACTGCTGGCTCTTCTGTTAAACCTGTCATACCAAGCGGAACCT
CTTCCCAATATGTTTGTACTGGCTTAACAGCTGAAGCACACTCTTCTCCT
GTTACATCTTCTACCTTGCATCCTGGTTCAGTAAAAACTGCAACGCAGAG
AGTTGAGCATACTTCATCTGTTTCTTTGTCAATAAATGCACCAATGCAGC
AGTGTAATGCTGTTACATCTGGTACAGCCGTTGAAGTTTCTCCAAAGGAA
GATCTAGAGATCAAGGGTTCTGTGTCAGACAGTTTGCCCAAAGAGCAGGT
ACGGGAAAATAGAGCATATGTTTCAAAAAATGAACGAGGTGAGGAAGTTA
AAGAACATAAAGAAGCCTTGACAAACCCAGGATCTGAGTTGAGGAATATC
GTGGCTGAAGCTGAACATCCTAACGAGAAATTAATGGTTGACGGTGATCA
AGTAGGTGTCAAAGCAAACCCGGTCGAAGAGAGTGTAAATGCCAGTGATA
GTAAGGATTGCTTATTGGTTAAGAAAAGCACAACTCAGCCTACAGCTGAA
GAGAGTTGCAGGAATCATAGCATGACTGAGATGCCGGCTAAAGCCAGCTC
TTTAAGTGATGGATGCGCAAAGAATCTTGAAGTTTTGAGCACAGCAGAAA
CTGGCCGAGCTACATAGCGAGACATAGCATCTTGTTTATATTAATACATT
TATACATTAAGGTTTTCTATCCTGCCATTTTAGAAAAAATATATTGTAGA
TTTATTTGGAAAATGGATCTCGTGAAAAAGAAAGAAATTGCATTCCACAC
CAGTGTTACTCTGGTAGTTGTTGTAGAAGATAATTGTGTACTCTTTTTGT
GTCACAAATCATTCATAAGCGGGATTCAATTCAAGACTTCTCCAGCATTT
GGATTAAAATAGTTGAAGATATAACAATCTTTTGCCTCATCCCTTTCATA
CAATTATGTGGTAAATCTTGGAAACATCTGTTACTTGTACACTAGAAACA
TGAAGGACTAGACTAGAAAGTATCAACCCAAAAGAATTGTGGTGAGAAGT
AGCTGTAAGAGGCAAGAGTCTATCCTGAAGGTTCTTTAGGTTCTATTATG
TAACTGAGCTGTTTCTGCAATGATTTCTTTGTCTTCCTTCTGTTCTTAAA
CTTTATTCCGAATAAGAAAGATTGCATAGGAACTCGAGGCTGCCAGGATT
TTGACTGGAATTGTGAAGATGTTGAGGAGCTGAGTTCTTTCTCCAAATCT
GCTGTTATTTTCTCGACTTCCTGCTTGAGTTGCCCCGCACGAGTGAAGCC
TGCATTCAGTTCATCGCCAACTTTTTTGATTTCCTGTTTCATGTTGAGAA
CCTCACCTTGAAACTTGGCAGCCTGATATTCACTGATCCCAGTTTCTCTA
CCACGGTTGGTCGCATTGGTAACTCTTGCTATCTCATCTTGGAAGTTGCA
CAACGAGAAATGTCTATCTTGGACTTCGTCTTTCAACACTTCATTGTTTT
CCAACCATAATGTTAATTCAGTTTTTATTTCTCTCAAGTGAGAAAAGATG
GGGCACACTTCCGATTTCATCTTCCCTCCGCTTCCTTCTTGATGAATCTT
TTCTCTCAACTTTGATAACTCTGCTTTCAAGTCCTTGACTGAAGTTTGAT
ATTTCTGTATCTGATGAATTGATGTGCTGAACCTCAACCAGAAC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding