g.barbadense_cottongen_reftransV1_0097845, g.barbadense_cottongen_reftransV1_0097845 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH8_ARATH (BEL1-like homeodomain protein 8 OS=Arabidopsis thaliana GN=BLH8 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.885e-42 Identity = 107/291 (36.77%), Postives = 149/291 (51.20%), Query Frame = -1 Query: 369 GAAESFATAIVNSRYLKPTESLLHEL-VNIGGKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEE 1238 G +A+ + +SR+L+P + +L E ++ K + + + + L S+E L P+N R++ AKL+ L EEV Y+ Y Q++ V+SSF ++AGL A Y +LAL+ SR F LR AI H+ I S+ Q SL + G +Q+ WRP RGLPE +VA+LR WLF+HFLHPYPTDS+K MLA+QTGL++NQV SNWFINARVRLWKPM+EE++ E Sbjct: 254 GPFTGYASILKSSRFLEPAQKMLEEFCISYASKIISRSESTSMED-----DDDDDDNLSGFSSSSEPLEPKN--RLKKAKLLFLQEEVCKWYKLYNHQLQTVMSSFNTVAGLNTATPYISLALKRTSRSFKALRTAIAEHVKQISSHSSNGNNNNRFQKRQRSLIGNNV-----------GFESQQQHIWRPQRGLPERAVAVLRAWLFDHFLHPYPTDSDKQMLATQTGLSRNQV--------------------------------SNWFINARVRLWKPMVEEIHTLE 494
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BEL1_ARATH (Homeobox protein BEL1 homolog OS=Arabidopsis thaliana GN=BEL1 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.411e-39 Identity = 113/305 (37.05%), Postives = 153/305 (50.16%), Query Frame = -1 Query: 369 IVNSRYLKPTESLLHELVNIGGKNVDENFFGKLYLG----------DRGGNARLSSELKAEFCSNEMLLPE------NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLS--------QLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEE 1211 I +S+YL P + LL E ++G K DE + D ++ ++ S++ +P EL+ R AKL+ +LEE++ RY Y +QM ++FE+ GLG A+ YTALA +AMSRHF L+D ++ I + + NR +S +L L D+ RQ + Q M WRP RGLPE +V LR WLFEHFLHPYP+D +K +LA QTGL+++QV SNWFINARVRLWKPMIEEMY EE Sbjct: 194 IGSSKYLSPAQELLSEFCSLGVKESDEEVMMMKHKKKQKGKQQEEWDTSHHSNNDQHDQSATTSSKKHVPPLHSLEFMELQKRKAKLLSMLEELKRRYGHYREQMRVAAAAFEAAVGLGGAEIYTALASRAMSRHFRCLKDGLVGQIQATSQALG-EREEDNRAVSIAARGETPRLRLLDQALRQQKSYRQ----MTLVDAHPWRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQV--------------------------------SNWFINARVRLWKPMIEEMYCEE 461
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: ATH1_ARATH (Homeobox protein ATH1 OS=Arabidopsis thaliana GN=ATH1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.274e-28 Identity = 77/217 (35.48%), Postives = 107/217 (49.31%), Query Frame = -1 Query: 372 LRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKE 1022 L + L+ LL+ V+ RY ++ V+S+F + L + +T ALQ +S + LR+ I I + L R + S+F + + + Q WRP RGLPE SV++LR W+F++FLHPYP DSEK +LA ++GLT++QV SNWFINARVRLWKPMIEEMY E Sbjct: 270 LEAKKTHLLDLLQMVDDRYSHCVDEIHTVISAFHAATELDP-QLHTRFALQTVSFLYKNLRERICKKIISMGSV----LERGKDKTQETSMFHQHCLLQQLKR--------KNHQIWRPQRGLPEKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQV--------------------------------SNWFINARVRLWKPMIEEMYAE 441
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: PKNX2_HUMAN (Homeobox protein PKNOX2 OS=Homo sapiens GN=PKNOX2 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.632e-10 Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = -1 Query: 387 RG-LPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIE 662 RG LP+ + I+R+WLF+H +HPYPT+ EK +A+QT LT +Q++NWFINAR R+ +PM++ Sbjct: 292 RGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLT--------------------------------LLQVNNWFINARRRILQPMLD 352
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: PKNX2_MOUSE (Homeobox protein PKNOX2 OS=Mus musculus GN=Pknox2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.017e-10 Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = -1 Query: 387 RG-LPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIE 662 RG LP+ + I+R+WLF+H +HPYPT+ EK +A+QT LT +Q++NWFINAR R+ +PM++ Sbjct: 292 RGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLT--------------------------------LLQVNNWFINARRRILQPMLD 352
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: PKNX2_PONAB (Homeobox protein PKNOX2 OS=Pongo abelii GN=PKNOX2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.512e-10 Identity = 32/93 (34.41%), Postives = 49/93 (52.69%), Query Frame = -1 Query: 387 RG-LPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIE 662 RG LP+ + I+R+WLF+H +HPYPT+ EK +A+QT LT +Q++NWF+NAR R+ +PM++ Sbjct: 292 RGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLT--------------------------------LLQVNNWFVNARRRILQPMLD 352
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: HTH_DROME (Homeobox protein homothorax OS=Drosophila melanogaster GN=hth PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.388e-10 Identity = 37/117 (31.62%), Postives = 55/117 (47.01%), Query Frame = -1 Query: 315 RGL-PETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMG 662 RG+ P+ + ILR WLF+H HPYP++ +K LA TGLT +Q++NWFINAR R+ +PMI++ + + P S + +MG Sbjct: 369 RGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLT--------------------------------ILQVNNWFINARRRIVQPMIDQSNRAVYTPHPGPS--GYGHDAMG 451
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: MEIS1_HUMAN (Homeobox protein Meis1 OS=Homo sapiens GN=MEIS1 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 1.128e-9 Identity = 34/108 (31.48%), Postives = 53/108 (49.07%), Query Frame = -1 Query: 342 RGL-PETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSD 662 RG+ P+ + I+R WLF+H HPYP++ +K LA TGLT +Q++NWFINAR R+ +PMI++ + + +P + D Sbjct: 276 RGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLT--------------------------------ILQVNNWFINARRRIVQPMIDQSNRAVSQGTPYNPD 351
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: MEIS1_MOUSE (Homeobox protein Meis1 OS=Mus musculus GN=Meis1 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 1.138e-9 Identity = 34/108 (31.48%), Postives = 53/108 (49.07%), Query Frame = -1 Query: 342 RGL-PETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSD 662 RG+ P+ + I+R WLF+H HPYP++ +K LA TGLT +Q++NWFINAR R+ +PMI++ + + +P + D Sbjct: 276 RGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLT--------------------------------ILQVNNWFINARRRIVQPMIDQSNRAVSQGTPYNPD 351
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: MEIS1_XENLA (Homeobox protein Meis1 OS=Xenopus laevis GN=meis1 PE=1 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.309e-9 Identity = 34/108 (31.48%), Postives = 53/108 (49.07%), Query Frame = -1 Query: 342 RGL-PETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSD 662 RG+ P+ + I+R WLF+H HPYP++ +K LA TGLT +Q++NWFINAR R+ +PMI++ + + +P + D Sbjct: 276 RGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLT--------------------------------ILQVNNWFINARRRIVQPMIDQSNRAVSQGTPYNPD 351
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: B9GRJ0_POPTR (Homeodomain-containing family protein OS=Populus trichocarpa GN=POPTR_0002s03230g PE=4 SV=1) HSP 1 Score: 515.383 bits (1326), Expect = 6.659e-170 Identity = 286/481 (59.46%), Postives = 334/481 (69.44%), Query Frame = -1 Query: 348 MVSRDSPPNPTSSMLHHFIVSDPINSRNQFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAANETNHQTQRLSLSLGSHMLDP-------SLNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQD 1757 M S+DSPPNP S MLH FI+SD I S+NQF Q F +G LRG+ NTF QS G+LP+I SL ERMSRS+DL+ P ES+IS TRHLMDLLGAANETNHQ QRLSLSLGS ML P S NS + SPSYL+ R E REA N G + +DY+ T + F STSL R T+YG ESFA AI NSRYLKP +SLL E+V++ + V+ E + GKL+ + G+ RLSSELK E ++ E +EL++++AKLI LL+EVE RYEKYY QMEEVVSSFE +AGLGAAKSYTALALQAMS+HF LRDAI+S I+ +RKFS DLP+I+ LSQLSLF ++ + QQLGM+ QRQAWRPIRGLPETSV ILR+WLFEHFLHPYP D EKLMLASQ GLTKNQV SNWFINARVRLWKPMIEEMYKEEF D +D Sbjct: 1 MGSQDSPPNPASGMLHQFIISDSIASQNQFQSQNFSVFGPDLRGS-NTFSQSHGVLPSIKSLEERMSRSIDLVQVPSAVQESEISHTRHLMDLLGAANETNHQAQRLSLSLGSRMLVPQFQYRQRSFNSDLMSPSYLVPREEAREAYNLGGEQVNNDYSLTGSGFPQSSTSLSRPS-TSYGT-ESFAVAIGNSRYLKPAQSLLEEIVHVSCQAVEISNEKYVGKLFPCGQRGSLRLSSELKVELWGIGLVQAEKHELQLKIAKLIALLKEVEGRYEKYYHQMEEVVSSFEEIAGLGAAKSYTALALQAMSKHFCNLRDAIVSQIDETKRKFSRDLPKISTELSQLSLF-DKETKHNRISLQQLGMMQSQRQAWRPIRGLPETSVTILRSWLFEHFLHPYPNDYEKLMLASQAGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFADHSED 445
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: A5BIM6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001986 PE=4 SV=1) HSP 1 Score: 514.998 bits (1325), Expect = 1.889e-168 Identity = 285/457 (62.36%), Postives = 325/457 (71.12%), Query Frame = -1 Query: 306 GSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAANETNHQTQRLSLSLGSHMLDPS-------LNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPENE-LRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREG 1643 GS +G+ NTFPQSLG+LP+I SLGERMSRS+DL+ P V +ES+IS TRH MDLLGAANE+NHQ RLSLSLGSH+L PS LNS S +YL S E REACNPGV L DDY++ + FA+PSTSL+RS T+YG ESF A+ NSRYL+PT+SLL E+VN GGK +D E + G+L R G +SELKAE C N L E + ++I +AKLIGLLEEVE RYE+YY QME+VVSSFE +AG+GAAKSYTALALQAM RHF LRDAIIS INV RRK S DLP+I+ G SQLSLF +N + QQLGM RQAWRPIRGLPETSVAILR+WLFEHFLHPYP DSEKLMLASQTGLTKNQV SNWFINARVRLWKPMIEEMYKEEF +S +SDP ASSS REG Sbjct: 22 GSGGKGS-NTFPQSLGVLPSIQSLGERMSRSIDLVQXPAVGEESEISHTRHFMDLLGAANESNHQAHRLSLSLGSHVLMPSVHYRQRPLNSDFVSSNYLFSGEEAREACNPGVERLCDDYSYVSSAFATPSTSLNRSCSTSYGT-ESFVNAVGNSRYLRPTQSLLEEVVNAGGKAIDLSNEKYIGRLSRSGRRGALGFASELKAELCGNGSLSAEKQDIQIEIAKLIGLLEEVESRYEEYYHQMEDVVSSFEVIAGVGAAKSYTALALQAMFRHFCSLRDAIISQINVARRKLSXDLPKISTGFSQLSLF-DQEGRNXRMXLQQLGMFQSHRQAWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFAESSVESDPLVASSST-REG 442
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: M5XRQ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005361mg PE=4 SV=1) HSP 1 Score: 499.204 bits (1284), Expect = 2.439e-163 Identity = 290/503 (57.65%), Postives = 346/503 (68.79%), Query Frame = -1 Query: 285 MVSRDSPPNPTSSMLHHFIVSDPINSRNQFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSPIVTDESDIS-QTRHLMDLLGAANETNHQTQRLSLSLGSHMLDPS-------LNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEML-LPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1757 MVS+DSPPNP SS+ H FI+SD I ++N Q DAY S+ R N NTFPQSLG+LP++HSLGERMSRS+ L+ +P ++SD++ QTRHLMDL AA T +Q QRLSLSLGSHML PS +NS + S ++ + E EACNPGV ++ D+Y F + AS S SL RS T+YG ES A I NSRYLKP +SLL E+VN+GGK VD E GKLY R G SSELKAE C N ++ ++EL+ RLA LI LLE+VE R EKYY QMEEV+SSFE + G GAAKSYTALAL+AMSRHF LRDAI+SHI +RK D+P+I+ GLSQL+LF ++++ QQLG+ QRQA+RPIRGLPETSVAILRTWLFEHFLHPYP DSEKL+LASQTGL+KNQV SNWFINARVRLWKPMIEEMYKEEF +S +DS+ SFA SM EG TD ED Sbjct: 1 MVSQDSPPNPASSIFHQFIISDSIAAQNHLESQHLDAYESSFR-NRNTFPQSLGVLPSLHSLGERMSRSVALVQAPTGAEDSDMNNQTRHLMDLPRAA--TENQAQRLSLSLGSHMLVPSVQYRQRSMNSDLMSHNHFIIGEESGEACNPGVEHVSDEYCFIGSALASSSNSLSRSCSTSYGT-ESLADVIGNSRYLKPAQSLLDEIVNVGGKQVDISNEKHVGKLYGEGRRGAMGFSSELKAELCCNGLMSADKHELQARLANLITLLEQVEDRCEKYYHQMEEVMSSFEMVVGEGAAKSYTALALKAMSRHFCSLRDAIVSHIYAEKRKLLQDVPKISSGLSQLNLF-DRECRHKRMSLQQLGIFQSQRQAFRPIRGLPETSVAILRTWLFEHFLHPYPNDSEKLLLASQTGLSKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFGESSEDSN-SFAGGSMTGEGNTDHTED 465
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: B9H4F9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s25350g PE=4 SV=2) HSP 1 Score: 479.945 bits (1234), Expect = 3.389e-156 Identity = 281/489 (57.46%), Postives = 322/489 (65.85%), Query Frame = -1 Query: 285 MLHHFIVSDPINSRNQFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAANETNHQTQRLSLSLGSHMLDP-------SLNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1718 MLH FI SD I S+NQF Q FDA L G+ NTFPQS G+LP+I SL ERMSRS+DL+ +P V ES+IS TRHLM LLGAANETN Q QRLSLSLGSHML P S NS + S E N +DY+ + F S SL R T YG ESFA AI NSRYLKP +SLL E V++ K V+ E + +L G+ LSSELKAE N ++ E +E+++++AKLI LLEEVE RYEKYY QMEEVVSSFE +AGLGAAKSYTALALQAMS+HF LRDAI+S IN RRKFS DLPR + GLS LS F ++ + QQLGM QRQAWRPIRGLPETSVAILR+WLFEHFLHPYP +SEKLMLASQTGLTKNQV SNWFINARVRLWKPMIEEMYK EF DS +DS+P SS + REG+TD +ED Sbjct: 14 MLHQFIFSDSITSQNQFQNQNFDA----LVGS-NTFPQSHGVLPSIQSLEERMSRSIDLVQAPSVAQESEISHTRHLMSLLGAANETNRQAQRLSLSLGSHMLVPQVQYRQRSFNSDLMS-----------EQAN-------NDYSLIGSGFPSSPASLSRRSTTAYGT-ESFAVAIENSRYLKPAQSLLEETVHVSCKAVEISNEKYVRRLIRCR--GSLGLSSELKAELWGNGLVQAEKHEVQLKIAKLIALLEEVEGRYEKYYHQMEEVVSSFEEMAGLGAAKSYTALALQAMSKHFCNLRDAIVSQINETRRKFSQDLPRTSSGLSPLSFF-DKETKHNRMSLQQLGMTQSQRQAWRPIRGLPETSVAILRSWLFEHFLHPYPNESEKLMLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKVEFADSSEDSNPLPGSSFITREGVTDHSED 443
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: V4TF60_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001116mg PE=4 SV=1) HSP 1 Score: 449.514 bits (1155), Expect = 2.196e-145 Identity = 255/430 (59.30%), Postives = 298/430 (69.30%), Query Frame = -1 Query: 285 MDLLP--SPIVTDES-DISQTRHLMDLLGAANETNHQTQRLSLSLGSHMLDPSLNSGITSPSYLLSRAEDREACNPGVG-NLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPEN-ELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1550 MDL+ +P V +ES +IS TRHLMDLLGA+NETN Q+QRLSLSLGSHML PS + SP+YL E RE CNPGV ++ + Y+F N S++R+ + ESFA A+ NSR+L+P +SLL E+VN+G KN+D E + KLY G R G RLSSELKAE C+ L E ELR+R+AKLI LLEEVE +YE YY QMEEVVSS+E +AGLGAAKSYT+LALQAMSRHF LRDAIIS IN+ R+FS DLP+I+ GLSQLSLF ++ + QQLGM QRQ WRPIRGLPETSV ILR+WLFEHFLHPYP DSEK +LASQTGLTKNQV SNWFINARVRLWKPMIEEMY+EEF DS +DS+PSFA SS REG DQA D Sbjct: 1 MDLVHVHAPAVAEESSEISHTRHLMDLLGASNETNDQSQRLSLSLGSHMLVPSGHYN-QSPNYLFYGDEAREVCNPGVDQHVSEGYSFNSN-------SINRA--CSIDGTESFAYAVGNSRFLRPAQSLLEEVVNVG-KNIDMSDERYISKLYHGSRRGGLRLSSELKAEMCNTGTLSAEKQELRLRIAKLISLLEEVESKYEIYYNQMEEVVSSYEVIAGLGAAKSYTSLALQAMSRHFCSLRDAIISQINIASRRFSQDLPKISSGLSQLSLF-DREARHHRMSLQQLGMFHSQRQVWRPIRGLPETSVGILRSWLFEHFLHPYPNDSEKQLLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYREEFADSSEDSNPSFAGSSATREGGADQAGD 386
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: A0A068UG59_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_26 OS=Coffea canephora GN=GSCOC_T00024743001 PE=4 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 2.772e-144 Identity = 257/495 (51.92%), Postives = 326/495 (65.86%), Query Frame = -1 Query: 285 MVSRDSPPNPTSSMLHHFIVSDPINSRNQFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAANETNHQTQRLSLSLGSHMLDPSLNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSL-HRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1757 MVS+DSP NP +S+LH FI+S+ I S+NQFGG+ FDAY + L G +T+ SLG P++ GER+ RS+D++ +P +TDESD++ RHLMDLLGA+NE N+ QRLSLSLG+H REACNP ++ Y+F + FA+ STS H+S +YG E+ A AI NS+YL+P + LL E+V +G K +D E + +L + G+ +L SE+ EF +NE+ ++EL+ +L KLI LLEEVE RYE+YY M+E+VSSFE +AGLGA KSYTALALQAMSRHF LR+AI+S I V +RK S D+P+I+ +SQLSLF ++ + QQL MI RQAWRPIRGLPETSVAILR+WLFEHFLHPYP DSEKL LASQTGL+KNQV SNWFINARVRLWKPMIEEMYKEEF +S +S+P S+ REG D AED Sbjct: 1 MVSQDSPSNPNTSILHQFIISNSIASQNQFGGEHFDAYANGLSGG-STY-DSLGSTPSLQCFGERIPRSIDIVNAPQLTDESDVNHPRHLMDLLGASNEANYHAQRLSLSLGTH--------------------NAREACNPRGDSINSSYSFGGSVFAASSTSPNHQSSCISYGT-EALAVAISNSKYLRPAQWLLDEVVKVGSKAIDLSNEKYARRLSSSSKRGSLKLRSEINLEFTNNEVFTEKHELQAKLLKLIALLEEVERRYEQYYHHMDELVSSFEMIAGLGAGKSYTALALQAMSRHFCCLREAILSQIYVTKRKISEDMPKISSDMSQLSLF-DQENRHSRLSLQQLSMIQSSRQAWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLTLASQTGLSKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFAESYVESNP-----SISREGFADSAED 434
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: I1K7P3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 431.409 bits (1108), Expect = 1.743e-137 Identity = 267/493 (54.16%), Postives = 317/493 (64.30%), Query Frame = -1 Query: 285 RNQFGGQPFDAYGSTLRGNHNTFPQ-SLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAA-NETNHQ--TQRLSLSLGSHMLDPS---------LNSGITSPSYLLSRAEDREACN-PGVG---NLRDDYNFTVNTFASPS-------TSLHRSLLTTYG-AAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1679 +NQF Q D YGS++R N+ +FP+ SLG PT S+G +V + S+IS TRHLMDLLGAA NE NH Q LSLSLGSHML PS LN G+ +P+Y +S E REACN P V N+ DY F NT S + L+RS TT AAESFA I NSRYLKP +SLL +LV++GG VD + + KL+ G RG LSSEL+ + +L ++E +I++A+LI LL+EVE R EKYY QMEEVVSSFE +AGLGAAKSYTALALQAMSRHF LRDAI+SHIN +RK DLP+I+ GLSQLSLF + + QQLG+I QRQ WRPIRGLPETSVAILR+WLFEHFLHPYP DSEKLMLASQTGLTKNQV SNWFINARVRLWKPMIEEMYKEEF +S +DS+P+ ++ + RE TD ED Sbjct: 9 QNQFENQDLDTYGSSMRHNNASFPEASLGAFPT--SIG-------------VVAEGSEISHTRHLMDLLGAAANERNHHQTAQGLSLSLGSHMLVPSDEYRHHQRPLNPGLINPNYFMSGQEPREACNNPPVEQQHNITSDYFF--NTAGSCTFASSSSSAPLNRSPNTTTSYAAESFAAVIGNSRYLKPVQSLLEDLVDVGGNVVDRINDKYAEKLFRGSRGSARTLSSELRN---NGHLLAGKHEHQIKIARLITLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKSYTALALQAMSRHFCSLRDAILSHINAEKRKLFQDLPKISSGLSQLSLF-DRDSRQSRMSLQQLGVIQSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFGESSEDSNPA-GNNYLTREDTTDCVED 447
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: A0A0B2QL78_GLYSO (BEL1-like homeodomain protein 11 OS=Glycine soja GN=glysoja_021981 PE=4 SV=1) HSP 1 Score: 431.409 bits (1108), Expect = 1.743e-137 Identity = 267/493 (54.16%), Postives = 317/493 (64.30%), Query Frame = -1 Query: 285 RNQFGGQPFDAYGSTLRGNHNTFPQ-SLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAA-NETNHQ--TQRLSLSLGSHMLDPS---------LNSGITSPSYLLSRAEDREACN-PGVG---NLRDDYNFTVNTFASPS-------TSLHRSLLTTYG-AAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1679 +NQF Q D YGS++R N+ +FP+ SLG PT S+G +V + S+IS TRHLMDLLGAA NE NH Q LSLSLGSHML PS LN G+ +P+Y +S E REACN P V N+ DY F NT S + L+RS TT AAESFA I NSRYLKP +SLL +LV++GG VD + + KL+ G RG LSSEL+ + +L ++E +I++A+LI LL+EVE R EKYY QMEEVVSSFE +AGLGAAKSYTALALQAMSRHF LRDAI+SHIN +RK DLP+I+ GLSQLSLF + + QQLG+I QRQ WRPIRGLPETSVAILR+WLFEHFLHPYP DSEKLMLASQTGLTKNQV SNWFINARVRLWKPMIEEMYKEEF +S +DS+P+ ++ + RE TD ED Sbjct: 9 QNQFENQDLDTYGSSMRHNNASFPEASLGAFPT--SIG-------------VVAEGSEISHTRHLMDLLGAAANERNHHQTAQGLSLSLGSHMLVPSDEYRHHQRPLNPGLINPNYFMSGQEPREACNNPPVEQQHNITSDYFF--NTAGSCTFASSSSSAPLNRSPNTTTSYAAESFAAVIGNSRYLKPVQSLLEDLVDVGGNVVDRINDKYAEKLFRGSRGSARTLSSELRN---NGHLLAGKHEHQIKIARLITLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKSYTALALQAMSRHFCSLRDAILSHINAEKRKLFQDLPKISSGLSQLSLF-DRDSRQSRMSLQQLGVIQSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFGESSEDSNPA-GNNYLTREDTTDCVED 447
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: A0A072V2D2_MEDTR (BEL1-like homeodomain protein OS=Medicago truncatula GN=MTR_3g112290 PE=4 SV=1) HSP 1 Score: 421.394 bits (1082), Expect = 1.207e-133 Identity = 263/491 (53.56%), Postives = 318/491 (64.77%), Query Frame = -1 Query: 300 IVSDPINSRNQFGGQPFDAYG---STLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAANETNHQTQR-LSLSLGSHML-----DPSLNSGI-TSPSYLL-SRAEDREACN-PGVGNLRDDYNFT--VNTFASPSTSLH-----RSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEF-CSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGIT 1703 ++S+ + +NQF Q G S+LR N+N + +SLG L + S++S TRHLMDLLGAANE NHQTQ+ LSLSLGSHML + SLN G+ +PSY + + + RE CN P V NL DY F+ TFAS S + + RS T+YG+ ESF + I NSRYLKP +SLL +LV++GG +D E + KL+ G R G LSSELKAE +L ++E ++++AKLI LL+EVE RYEKYY QMEEVVSSFE +AGLGAAK YTALALQAMSRHF LRDAI+S IN +RK D+P+IN GLSQLSLF+RD+ + + QQLG+I QRQ WRPIRGLPETSVAILR WLFEHFLHPYP DSEKL+LASQTGLTKNQV SNWFINARVRLWKPMIEEMYKEEF DS +DS+P A++ M RE T Sbjct: 1 MMSNSMTHQNQFENQELLGGGYVSSSLR-NNNAYHESLGTFSNNIGLAQG----------------SEMSHTRHLMDLLGAANENNHQTQQGLSLSLGSHMLVDEYRNRSLNQGLMINPSYFMPGQDQTREPCNQPVVENLTSDYFFSGGSGTFASGSNNNNSLLLNRSTSTSYGS-ESFGSVIGNSRYLKPVQSLLEDLVDVGGNVIDRMNEKYAEKLFHGSRTGARTLSSELKAELRIHGHLLADKHEHQVKIAKLISLLDEVEGRYEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAIMSQINAEKRKLFQDVPKINSGLSQLSLFERDNNRQTRMSLQQLGVIQNQRQVWRPIRGLPETSVAILRAWLFEHFLHPYPNDSEKLILASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFGDSSEDSNPP-ANNFMSREDST 440
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: V7AWL8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G060500g PE=4 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 5.208e-132 Identity = 249/467 (53.32%), Postives = 304/467 (65.10%), Query Frame = -1 Query: 285 NHNTFPQSLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAANETNH-QTQRLSLSLGSHMLDPS---------LNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTV----NTFASPSTS-LHRSLLTT-YGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1625 ++N FP++LG P+I + + S+IS RH MDLLGAANE+NH Q Q LSLSLGSHML PS LN+G+ +P++ + E R ACNP V +L DY F NTF S S++ L+RS +T Y ESFA+ I NSRYLKP +SLL +LV++GG VD E + K+ G RG LSSELKAE +N LL + +E I++A+LI LL++ E R EKYY QMEEVVSSFE +AGLGAAK YTALALQAMSRHF LR+AI+S IN +RK DLP+I+ GLSQLSLF ++ + QQLG+I QRQ WRPIRGLPETSVAILR+W+FEHFLHPYP DSEKLMLASQTGLTKNQV SNWFINARVRLWKPMIEEMYK+EF +S +DS+P+ A++ + RE TD ED Sbjct: 8 HNNAFPEALGAFPSIG-----------------MAEGSEISHPRHFMDLLGAANESNHHQPQGLSLSLGSHMLIPSDEYRHHQRPLNTGLINPNFFMPGQEARVACNPPVEHLTSDYFFNTDTGTNTFVSSSSAPLNRSPNSTPYAPPESFASVIGNSRYLKPVQSLLEDLVDVGGNVVDRINEKYVEKMLHGSRGVRI-LSSELKAELRNNGPLLADKHEHHIKIARLISLLDKAEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLREAILSQINAEKRKLFQDLPKISSGLSQLSLF-DRDIRHSRMSLQQLGVIQSQRQVWRPIRGLPETSVAILRSWIFEHFLHPYPNDSEKLMLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKDEFGESSEDSNPA-ANNCLTREDTTDCVED 422 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
Pagesback to top
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097845 ID=g.barbadense_cottongen_reftransV1_0097845; Name=g.barbadense_cottongen_reftransV1_0097845; organism=Gossypium barbadense; type=contig; length=2870bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|