g.barbadense_cottongen_reftransV1_0097845, g.barbadense_cottongen_reftransV1_0097845 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH11_ARATH (BEL1-like homeodomain protein 11 OS=Arabidopsis thaliana GN=BLH11 PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 3.351e-82 Identity = 155/304 (50.99%), Postives = 203/304 (66.78%), Query Frame = -1 Query: 345 SFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNE-MLLPEN-ELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKF--SH-DLPR-INRGLSQLSLFXXXXXXXXXXXXXXLGMIPR-QRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDS 1226 S +++SRY K + L+ E+++IGG+ V+ +L+ G R LSSE+K+E CS+ M LPEN E+ I++ KL+ LL++VE R+E+Y Q+E+V+SSFE +AG G++K YT LALQAM+RHFG L +AIIS +N +RR+F SH D+P+ I+ GLSQLSLF S Q+LG++ QR AW+PIRGLPETSVAILR WLF+HFLHPYP ++EKL+LASQTGL+KNQV SNWFINARVRLWKPMIEEMY+EEF DS +S Sbjct: 12 SLRGTLLDSRYAKAVQCLVEEVIDIGGREVELCNNILINQLFPGRRRPGFALSSEIKSELCSSGFMSLPENHEIHIKITKLLSLLQQVEERFEQYCNQLEQVISSFEEIAGEGSSKVYTGLALQAMTRHFGSLEEAIISQLNSVRRRFIISHQDVPKIISSGLSQLSLF---DGNTTSSSLQRLGLVQGPQRHAWKPIRGLPETSVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQV--------------------------------SNWFINARVRLWKPMIEEMYREEFGDSLDES 280
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH7_ARATH (BEL1-like homeodomain protein 7 OS=Arabidopsis thaliana GN=BLH7 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 1.850e-61 Identity = 133/303 (43.89%), Postives = 181/303 (59.74%), Query Frame = -1 Query: 327 FATAIVNSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE---NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRIN-RGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFAS 1223 F I NS+YLK + LL E VN+ K + F + GD+ ++ + +N +P+ EL+ +L+KL+ +L+EV+ Y++YY QM+ VVSSF+ +AG GAAK YTALALQ +SRHF LRDAI I VIR+ + + RG+ L + D + +Q Q+LG++ Q WRP RGLP++SV +LR WLFEHFLHPYP DS+K+MLA QTGL++ QV SNWFINARVRLWKPM+EEMYKEEF D+ Q++DP+ +S Sbjct: 111 FTRTIHNSKYLKAAQELLDETVNV--KKALKQFQPE---GDK-----INEVKEKNLQTNTAEIPQAERQELQSKLSKLLSILDEVDRNYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAISGQILVIRKSLGGEQDGSDGRGVGISRLRNVDQQVRQQRALQRLGVM--QPHTWRPQRGLPDSSVLVLRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQV--------------------------------SNWFINARVRLWKPMVEEMYKEEFTDALQENDPNQSS 369
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH10_ARATH (BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana GN=BLH10 PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.374e-60 Identity = 134/307 (43.65%), Postives = 176/307 (57.33%), Query Frame = -1 Query: 360 FATAIVNSRYLKPTESLLHELVNI-------GGKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHD------------LPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFED 1223 F ++++ SRYLKP ++LL E+V++ G K + N F GG LSS+ + + E EL+ + KL+ +++EV+ RY +YY QME + SSFE +AGLG+AK YT++AL +SRHF LRDAI I ++R K +PR+ R L Q + +++L QQLGM+ R AWRP RGLPE SV++LR WLFEHFLHPYP +SEK+MLA QTGL+KNQV +NWFINARVRLWKPMIEEMYKEEF D Sbjct: 162 FMSSVLRSRYLKPAQNLLDEVVSVKKELNQMGKKKMKVNDFNSGSKEIEGGGGELSSDSNGKSIELSTIERE-ELQNKKNKLLTMVDEVDKRYNQYYHQMEALASSFEIVAGLGSAKPYTSVALNRISRHFRALRDAIKEQIQIVREKLGEKGGESLDEQQGERIPRL-RYLDQ-------RLRQQRALHQQLGMV---RPAWRPQRGLPENSVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQV--------------------------------ANWFINARVRLWKPMIEEMYKEEFGD 424
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH3_ARATH (BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 5.526e-59 Identity = 130/297 (43.77%), Postives = 174/297 (58.59%), Query Frame = -1 Query: 351 FATAIVNSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGG---NARLSSELKAEFCSNEMLLP--ENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSL-FXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQ 1223 F ++++ SRYLKPT+ LL E+V++ D K D+G N + + + ++ L P EL+ + +KL+ +++EV+ RY +Y+ QME + SSFE + GLGAAK YT++AL +SRHF LRDAI I VIR K +G L + + +++L QQLGM+ R AWRP RGLPE SV+ILR WLFEHFLHPYP +SEK+ML+ QTGL+KNQV +NWFINARVRLWKPMIEEMYKEEF +S + Sbjct: 164 FVSSVLRSRYLKPTQQLLDEVVSV---RKDLKLGNKKMKNDKGQDFHNGSSDNITEDDKSQSQELSPSERQELQSKKSKLLTMVDEVDKRYNQYHHQMEALASSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAIKEQIQVIRGKLGERETSDEQGERIPRLRYLDQRLRQQRALHQQLGMV---RPAWRPQRGLPENSVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQV--------------------------------ANWFINARVRLWKPMIEEMYKEEFGESAE 422
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH6_ARATH (BEL1-like homeodomain protein 6 OS=Arabidopsis thaliana GN=BLH6 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.416e-56 Identity = 128/294 (43.54%), Postives = 172/294 (58.50%), Query Frame = -1 Query: 345 IVNSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGG-NARLSSELKAEFCSN---EMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDS 1211 I NS+YLK + LL E VN+ K + F + GD+ N + ++ + +N ++ E E++ +L KL+ +L+EV+ RY++YYQQM+ VVSSF+ +AG GAAK YTALALQ +SRHF LRDAI I V+R+ + ++ + R ++ QQ+ M P QAWRP RGLPE SV ILR WLFEHFLHPYP DS+K+MLA QTGL++ QV SNWFINARVRLWKPM+EE+YKEEF ++ +S Sbjct: 141 IPNSKYLKAAQQLLDEAVNV--KKALKQFQAE---GDKNNENPQEPNQSTQDSSTNPPADISQSERQEMQSKLTKLLSMLDEVDRRYKQYYQQMQIVVSSFDVIAGYGAAKPYTALALQTISRHFRSLRDAISGQILVLRKCLGEQ--QDGSDGKRVGIISRLKYVDQHLRQQRGFMQP---QAWRPQRGLPENSVLILRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQV--------------------------------SNWFINARVRLWKPMVEEIYKEEFTENDSNS 392
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH5_ARATH (BEL1-like homeodomain protein 5 OS=Arabidopsis thaliana GN=BLH5 PE=1 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 2.411e-47 Identity = 109/297 (36.70%), Postives = 153/297 (51.52%), Query Frame = -1 Query: 342 YLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGGN-----ARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAI---ISHINVI--RRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEE--FEDSPQDSD 1196 YLK + LL+E+VN+G G G ++ S+ E + L+++ AKLI + E VE RY++Y+ QM+ ++SSFE AGLG+A SYT +ALQ +S+ F ++D I I IN + +++F L ++ + M AWRP RGLPE +V++LR+WLFEHFLHPYP D +K+MLA QTGLTK+QV SNWFINARVR+WKP++EE+Y EE E+S + SD Sbjct: 82 YLKAAQELLNEIVNVGN-------------GSHGAKQERPVSKESTIYGVEDINGGYKPGVAALQMKKAKLISMGEMVEQRYKQYHDQMQTIISSFEQAAGLGSANSYTHMALQTISKQFRAVKDMISLQIKQINKLLGQKEFDEQLKKLGK------------------------MAHHHSNAWRPQRGLPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQV--------------------------------SNWFINARVRMWKPLVEELYSEEMDIEESRKGSD 309
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH1_ARATH (BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 9.642e-44 Identity = 116/313 (37.06%), Postives = 151/313 (48.24%), Query Frame = -1 Query: 396 IVNSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRG--GNAR-------------------LSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVI-------------------RRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPR-QRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKP 1211 +V+S+YLK + LL E+VN + D N +L+ +G GN + + + E + E E++++ AKL +L EVE RY +Y+QQM+ V+SSFE AG+G+AKSYT+LAL+ +SR F L++AI I R KF R R L QL GMI AWRP RGLPE +V++LR WLFEHFLHPYP DS+K MLA QTGLT++QV SNWFINARVRLWKP Sbjct: 190 LVSSKYLKAAQELLDEVVN--ADSDDMNAKSQLFSSKKGSCGNDKPVGESSAGAGGEGSGGGAEAAGKRPVELGTAE----RQEIQMKKAKLSNMLHEVEQRYRQYHQQMQMVISSFEQAAGIGSAKSYTSLALKTISRQFRCLKEAIAGQIKAANKSLGEEDSVSGVGRFEGSRLKFVDHHLRQQRALQQL------------------GMIQHPSNNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQV--------------------------------SNWFINARVRLWKP 446
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH9_ARATH (BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana GN=BLH9 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 3.484e-43 Identity = 129/365 (35.34%), Postives = 177/365 (48.49%), Query Frame = -1 Query: 369 LSLSLGSHMLDPSLNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIG-GKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAI-----ISHINVI--RRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEE 1439 LSLSL SH P L + P + N G + N T AS S+ G +A+ + SR+LKP + LL E N+G G D+ + L + E + + +KLI +L+EV RY++YY+Q++ V+ SFE +AGLG A Y LAL+A+S+HF L++AI SH N I +++ H + N+ S L DS + S Q+ G WRP RGLPE +V +LR WLF+HFLHPYPTD++KLMLA QTGL++NQV SNWFINARVR+WKPM+EE++ E Sbjct: 115 LSLSLSSH---PRLAYDLVVPGVV----------NSGFCRSAGEANAAAVTIASRSSG-------PLGPFTGYASILKGSRFLKPAQMLLDEFCNVGRGIYTDKVIDDDD--------SSLLFDPTVENLCGVSDGGGGDNGKKKSKLISMLDEVYKRYKQYYEQLQAVMGSFECVAGLGHAAPYANLALKALSKHFKCLKNAITDQLQFSHNNKIQQQQQCGHPMNSENKTDS-LRFGGSDSSRGLCSAGQRHGFPDHHAPVWRPHRGLPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQV--------------------------------SNWFINARVRVWKPMVEEIHMLE 418
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 7.361e-43 Identity = 113/295 (38.31%), Postives = 155/295 (52.54%), Query Frame = -1 Query: 375 NSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEM------LLPEN--ELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDL-------PRINRGLSQLS---LFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYK 1205 NS+Y KP + LL E ++G + +N KL + N S L P + E + R KL+ +LEEV+ RY Y +QM+ VV+SF+ + G GAA YT LA +AMSRHF L+DA+ ++ K S +L + GL++ L + +Q +GM+ +++AWRP RGLPE SV ILR WLFEHFL+PYP+D++K +LA QTGL++NQV SNWFINARVRLWKPM+EEMY+ Sbjct: 240 NSKYTKPAQELLEEFCSVGRGHFKKN---KLSRNNSNPNTTGGGGGGGSSSSAGTANDSPPLSPADRIEHQRRKVKLLSMLEEVDRRYNHYCEQMQMVVNSFDQVMGYGAAVPYTTLAQKAMSRHFRCLKDAV-----AVQLKRSCELLGDKEAAGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMM--EQEAWRPQRGLPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLSRNQV--------------------------------SNWFINARVRLWKPMVEEMYQ 492
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 1.052e-42 Identity = 113/297 (38.05%), Postives = 154/297 (51.85%), Query Frame = -1 Query: 372 NSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPEN---------ELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDL--PRINRGLSQLSLFXXXX--------XXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKE 1205 NSRY + LL E ++G F K LG+ + S+ E+ E + R KL+ +LEEV+ RY Y +QM+ VV+SF+ + G GAA YTALA +AMSRHF L+DA+ + + K S +L + G+S L ++ + Q+GM+ +++AWRP RGLPE SV ILR WLFEHFLHPYP+D++K +LA QTGL++NQV SNWFINARVRLWKPM+EEMY++ Sbjct: 315 NSRYTTAAQELLEEFCSVG-----RGFLKKNKLGNSSNPNTCGGDGGGSSPSSAGANKEHPPLSASDRIEHQRRKVKLLTMLEEVDRRYNHYCEQMQMVVNSFDIVMGHGAALPYTALAQKAMSRHFRCLKDAVAAQL-----KQSCELLGDKDAAGISSSGLTKGETPRLRLLEQSLRQNRAFHQMGMM--EQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQV--------------------------------SNWFINARVRLWKPMVEEMYQQ 567
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: A0A059BQ86_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01858 PE=4 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 1.869e-122 Identity = 248/502 (49.40%), Postives = 307/502 (61.16%), Query Frame = -1 Query: 294 MVSRDSPPNPTSSMLHHFIVSDPINSRNQFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAANETNHQTQRLSLSLGSHMLDPSL---------NSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLG-DRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQ 1757 MV+ +SPP+P + H FI + +QF G +YGS LR N+ F + +G +P+I ERM RS++L+ SP+ ES I+ TRHLMDLL AN N Q L+LSL S + +P+ + SPSY++ E REAC+ + FAS S +R T+Y + + I NS YLKP +SLL E+V+I G + E + KLY G +R L SELK EF N L PE +EL+ +LAKL+ LLEEVE R+ KYY MEEV SFES+AGLGAAKSYTALALQAM+RHF LRDAI+S I + R K D RI+ GLS+LSLF+R+ RQ +++ QQLG++ QRQAWRPIRGLPETS+AILR+WLFEHFLHPYP DSEKLMLASQTGLTKN QISNWFINARVRLWKPMIEEMYKEE DS +DS+P S ITD+ Sbjct: 1 MVTHESPPDPMPTAWHRFIPCE-----SQFEGPDLSSYGSALR-NNTAFFEPIGAVPSIQYHRERMPRSINLVHSPVTVAESHITHTRHLMDLLEVANVPN-QAHSLTLSLNSPLPEPNTVQFGHRPLGGTDFNSPSYVVP-GESREACDAS----------NDSEFASSSAPRNRQCFTSY-RPDLVPSIIGNSTYLKPAQSLLEEIVSICGNGAEIANEKYLRKLYGGAERKATLGLVSELKEEF-GNIGLPPEKHELQAKLAKLVSLLEEVEARFMKYYFHMEEVALSFESVAGLGAAKSYTALALQAMTRHFCNLRDAIVSQIKITRIKLFDDSSRISCGLSRLSLFNRECRQKQRNSLQQLGLMHGQRQAWRPIRGLPETSLAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKN--------------------------------QISNWFINARVRLWKPMIEEMYKEEIADSSEDSNPLIKGS------ITDE 444
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: M0ZWL8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003750 PE=4 SV=1) HSP 1 Score: 386.726 bits (992), Expect = 7.799e-121 Identity = 249/498 (50.00%), Postives = 307/498 (61.65%), Query Frame = -1 Query: 285 MVSRDSPPNPTSSMLHHFIVSDPINSRNQFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSP-IVTDESDISQTRHLMDLLGAANE--TNHQTQRLSLSLGSHMLDPSLNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFC-SNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1757 MVS+DSPP SS+LH FI SD I + +Q G Q FD Y S + T Q G L SRS++ + P TD D++ +RHLMDLLGA+++ TN Q QRLSLSLGSH L S T+PSY+ N + ++Y+F+ + ++++S G ESF +AI NS+YLKPT+SLL ELV IGGK +D E F +L + G+ L + LK E SNE+ +EL +++ KLI LLEEVE RYE+YYQ MEEV S+FE +A GA K+YT LALQAMSRHF LRDAIIS INVIR+K D+P+I+ GLS LSLF + QQLG+I RQAWRPIRGLPETSVAILR+WLFEHFLHPYP DSEKLML+SQTGL+KNQV SNWFINARVRLWKPMIEEMYKEEF +S +SD + + REG+TD AE+ Sbjct: 1 MVSKDSPPPSHSSILHQFINSDSIMT-SQIGSQHFDMYQS----DTTTAYQPHGGL----------SRSIEFVNHPDFTTDSHDVNHSRHLMDLLGASHDANTNQQAQRLSLSLGSHSLVSSF----TNPSYM----------NQEIDQRNNEYSFS-------AAAMNQSFSNVCGT-ESFVSAIGNSKYLKPTQSLLEELVCIGGKTIDSSNEKFIRRLSRNSKKGSLSLRAMLKGEIPPSNELFNERHELYVKIMKLIVLLEEVERRYEQYYQHMEEVTSTFEVIAAFGAGKAYTVLALQAMSRHFCCLRDAIISQINVIRQKMLRDVPKISSGLSHLSLF-EKETLQNRISLQQLGIIQGNRQAWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLSSQTGLSKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFAESSVESD-----NLLNREGVTDSAEE 423
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: K7KHT6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 360.918 bits (925), Expect = 6.459e-112 Identity = 214/381 (56.17%), Postives = 252/381 (66.14%), Query Frame = -1 Query: 285 LNSGITSPSYLLSRAEDREACN-PGVG--NLRDDY--NFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1400 LN G+ +P+Y +S E RE CN P V N+ DY N TFAS S +RS +T S+A I NSRYLKP +SLL +LV++GG VD E + KL+ G RG LSSELKAE +N LL + +E +I++A+LI LL+EVE R EKYY QMEEVVSSFE +AGLGAAK YTALALQAMSRHF LRDAI+S IN +RK DLP+I+ GLSQLSLF + + QQLG+I QRQ WRPIRGLPETSVAILR+WLFEHFLHPYP DSEKLMLASQTGLTKNQV SNWFINARVRLWKPMIEEMYKEEF + +DS+P+ ++ + RE TD ED Sbjct: 14 LNPGLINPNYFMSGQEAREPCNNPPVEQHNITSDYFYNTGSGTFASSSPLNNRSPNST----SSYAAVIGNSRYLKPVQSLLEDLVDVGGNVVDRINEKYAEKLFRGSRGSARTLSSELKAELGNNGHLLADKHEHQIKIARLITLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAILSQINAEKRKLFQDLPKISSGLSQLSLF-DRDSRQSRMSLQQLGVIRSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFGEFSEDSNPA-GNNYLTREDTTDCVED 356
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: K4BVF7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g080780.2 PE=4 SV=1) HSP 1 Score: 357.066 bits (915), Expect = 8.952e-110 Identity = 228/470 (48.51%), Postives = 282/470 (60.00%), Query Frame = -1 Query: 285 QFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSP-IVTDESDISQTRHLMDLLGAANE--TNHQTQRLSLSLGSHMLDPSLNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1673 Q G Q FD Y S + T Q G L SRS++ + P TD D++ +RHLMDLLGA+++ TN Q QRLSLSLGSH L + + +PSY+ + R N F+ + ++++S G ESF +AI NS+YLKPT+SLL ELV IGGK +D E F +L + G+ L + LK E N L E +EL +++ KLI LLEEVE RYE+YYQ MEEV S+FE +AG GA K+YTALALQAMSRHF LRD+IIS IN IR+K D+P+I+ GLS LSLF + QQLG+I RQAW+PIRGLPETSVA LR+WLFEHFLHPYP DSEKLML+SQTGL+KNQV SNWFINARVRLWKPMIEEMYKEEF +S +SD + + RE +TD AE+ Sbjct: 4 QIGSQHFDMYQS----DTTTAYQPHGGL----------SRSIEFVNHPDFTTDSHDVNHSRHLMDLLGASHDANTNQQAQRLSLSLGSHSLVSTFTN---NPSYMNQEIDQRN-----------------NEFSFSAAAMNQSFSNVCGT-ESFVSAIGNSKYLKPTQSLLEELVCIGGKTIDSSNEKFIRRLSRNSKKGSLSLRAMLKGEIPPNNELFNERHELYVKIMKLIALLEEVERRYEQYYQHMEEVTSTFEVIAGFGAGKAYTALALQAMSRHFCCLRDSIISQINFIRQKMPRDVPKISSGLSHLSLF-EKETLQNRISLQQLGIIQSNRQAWQPIRGLPETSVAFLRSWLFEHFLHPYPNDSEKLMLSSQTGLSKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFAESSVESD-----NLLNREAVTDSAEE 400
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: A0A0B2SMZ7_GLYSO (BEL1-like homeodomain protein 11 OS=Glycine soja GN=glysoja_023102 PE=4 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 1.332e-109 Identity = 210/370 (56.76%), Postives = 245/370 (66.22%), Query Frame = -1 Query: 285 LSRAEDREACN-PGVG--NLRDDY--NFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1367 +S E RE CN P V N+ DY N TFAS S +RS +T S+A I NSRYLKP +SLL +LV++GG VD E + KL+ G RG LSSELKAE +N LL + +E +I++A+LI LL+EVE R EKYY QMEEVVSSFE +AGLGAAK YTALALQAMSRHF LRDAI+S IN +RK DLP+I+ GLSQLSLF + + QQLG+IP QRQ WRPIRGLPETSVAILR+WLFEHFLHPYP DSEKLMLASQTGLTKNQV SNWFINARVRLWKPMIEEMYKEEF + +DS+P+ ++ + RE TD ED Sbjct: 1 MSGQEAREPCNNPPVEQHNITSDYFYNTGSGTFASSSPLNNRSPNST----SSYAAVIGNSRYLKPVQSLLEDLVDVGGNVVDRINEKYAEKLFRGSRGSARTLSSELKAELGNNGHLLADKHEHQIKIARLITLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAILSQINAEKRKLFQDLPKISSGLSQLSLF-DRDSRQSRMSLQQLGVIPSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFGEFSEDSNPA-GNNYLTREDTTDCVED 332 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097845 ID=g.barbadense_cottongen_reftransV1_0097845; Name=g.barbadense_cottongen_reftransV1_0097845; organism=Gossypium barbadense; type=contig; length=2870bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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