g.barbadense_cottongen_reftransV1_0097845, g.barbadense_cottongen_reftransV1_0097845 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097845
Unique Nameg.barbadense_cottongen_reftransV1_0097845
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2870
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt05chromosomeg.barbadense_cottongen_reftransV1_0097845:1..2870 .
Dt05:17483925..17486982 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH11_ARATH (BEL1-like homeodomain protein 11 OS=Arabidopsis thaliana GN=BLH11 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 3.351e-82
Identity = 155/304 (50.99%), Postives = 203/304 (66.78%), Query Frame = -1
Query:  345 SFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNE-MLLPEN-ELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKF--SH-DLPR-INRGLSQLSLFXXXXXXXXXXXXXXLGMIPR-QRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDS 1226
            S    +++SRY K  + L+ E+++IGG+ V+        +L+ G R     LSSE+K+E CS+  M LPEN E+ I++ KL+ LL++VE R+E+Y  Q+E+V+SSFE +AG G++K YT LALQAM+RHFG L +AIIS +N +RR+F  SH D+P+ I+ GLSQLSLF         S  Q+LG++   QR AW+PIRGLPETSVAILR WLF+HFLHPYP ++EKL+LASQTGL+KNQV                                SNWFINARVRLWKPMIEEMY+EEF DS  +S
Sbjct:   12 SLRGTLLDSRYAKAVQCLVEEVIDIGGREVELCNNILINQLFPGRRRPGFALSSEIKSELCSSGFMSLPENHEIHIKITKLLSLLQQVEERFEQYCNQLEQVISSFEEIAGEGSSKVYTGLALQAMTRHFGSLEEAIISQLNSVRRRFIISHQDVPKIISSGLSQLSLF---DGNTTSSSLQRLGLVQGPQRHAWKPIRGLPETSVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQV--------------------------------SNWFINARVRLWKPMIEEMYREEFGDSLDES 280          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH7_ARATH (BEL1-like homeodomain protein 7 OS=Arabidopsis thaliana GN=BLH7 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.850e-61
Identity = 133/303 (43.89%), Postives = 181/303 (59.74%), Query Frame = -1
Query:  327 FATAIVNSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE---NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRIN-RGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFAS 1223
            F   I NS+YLK  + LL E VN+  K   + F  +   GD+     ++   +    +N   +P+    EL+ +L+KL+ +L+EV+  Y++YY QM+ VVSSF+ +AG GAAK YTALALQ +SRHF  LRDAI   I VIR+    +    + RG+    L + D +  +Q   Q+LG++  Q   WRP RGLP++SV +LR WLFEHFLHPYP DS+K+MLA QTGL++ QV                                SNWFINARVRLWKPM+EEMYKEEF D+ Q++DP+ +S
Sbjct:  111 FTRTIHNSKYLKAAQELLDETVNV--KKALKQFQPE---GDK-----INEVKEKNLQTNTAEIPQAERQELQSKLSKLLSILDEVDRNYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAISGQILVIRKSLGGEQDGSDGRGVGISRLRNVDQQVRQQRALQRLGVM--QPHTWRPQRGLPDSSVLVLRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQV--------------------------------SNWFINARVRLWKPMVEEMYKEEFTDALQENDPNQSS 369          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH10_ARATH (BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana GN=BLH10 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.374e-60
Identity = 134/307 (43.65%), Postives = 176/307 (57.33%), Query Frame = -1
Query:  360 FATAIVNSRYLKPTESLLHELVNI-------GGKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHD------------LPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFED 1223
            F ++++ SRYLKP ++LL E+V++       G K +  N F        GG   LSS+   +      +  E EL+ +  KL+ +++EV+ RY +YY QME + SSFE +AGLG+AK YT++AL  +SRHF  LRDAI   I ++R K                +PR+ R L Q         + +++L QQLGM+   R AWRP RGLPE SV++LR WLFEHFLHPYP +SEK+MLA QTGL+KNQV                                +NWFINARVRLWKPMIEEMYKEEF D
Sbjct:  162 FMSSVLRSRYLKPAQNLLDEVVSVKKELNQMGKKKMKVNDFNSGSKEIEGGGGELSSDSNGKSIELSTIERE-ELQNKKNKLLTMVDEVDKRYNQYYHQMEALASSFEIVAGLGSAKPYTSVALNRISRHFRALRDAIKEQIQIVREKLGEKGGESLDEQQGERIPRL-RYLDQ-------RLRQQRALHQQLGMV---RPAWRPQRGLPENSVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQV--------------------------------ANWFINARVRLWKPMIEEMYKEEFGD 424          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH3_ARATH (BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 5.526e-59
Identity = 130/297 (43.77%), Postives = 174/297 (58.59%), Query Frame = -1
Query:  351 FATAIVNSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGG---NARLSSELKAEFCSNEMLLP--ENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSL-FXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQ 1223
            F ++++ SRYLKPT+ LL E+V++     D     K    D+G    N    +  + +   ++ L P    EL+ + +KL+ +++EV+ RY +Y+ QME + SSFE + GLGAAK YT++AL  +SRHF  LRDAI   I VIR K         +G     L +     + +++L QQLGM+   R AWRP RGLPE SV+ILR WLFEHFLHPYP +SEK+ML+ QTGL+KNQV                                +NWFINARVRLWKPMIEEMYKEEF +S +
Sbjct:  164 FVSSVLRSRYLKPTQQLLDEVVSV---RKDLKLGNKKMKNDKGQDFHNGSSDNITEDDKSQSQELSPSERQELQSKKSKLLTMVDEVDKRYNQYHHQMEALASSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAIKEQIQVIRGKLGERETSDEQGERIPRLRYLDQRLRQQRALHQQLGMV---RPAWRPQRGLPENSVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQV--------------------------------ANWFINARVRLWKPMIEEMYKEEFGESAE 422          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH6_ARATH (BEL1-like homeodomain protein 6 OS=Arabidopsis thaliana GN=BLH6 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.416e-56
Identity = 128/294 (43.54%), Postives = 172/294 (58.50%), Query Frame = -1
Query:  345 IVNSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGG-NARLSSELKAEFCSN---EMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDS 1211
            I NS+YLK  + LL E VN+  K   + F  +   GD+   N +  ++   +  +N   ++   E  E++ +L KL+ +L+EV+ RY++YYQQM+ VVSSF+ +AG GAAK YTALALQ +SRHF  LRDAI   I V+R+       +      ++ +  R    ++   QQ+  M P   QAWRP RGLPE SV ILR WLFEHFLHPYP DS+K+MLA QTGL++ QV                                SNWFINARVRLWKPM+EE+YKEEF ++  +S
Sbjct:  141 IPNSKYLKAAQQLLDEAVNV--KKALKQFQAE---GDKNNENPQEPNQSTQDSSTNPPADISQSERQEMQSKLTKLLSMLDEVDRRYKQYYQQMQIVVSSFDVIAGYGAAKPYTALALQTISRHFRSLRDAISGQILVLRKCLGEQ--QDGSDGKRVGIISRLKYVDQHLRQQRGFMQP---QAWRPQRGLPENSVLILRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQV--------------------------------SNWFINARVRLWKPMVEEIYKEEFTENDSNS 392          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH5_ARATH (BEL1-like homeodomain protein 5 OS=Arabidopsis thaliana GN=BLH5 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 2.411e-47
Identity = 109/297 (36.70%), Postives = 153/297 (51.52%), Query Frame = -1
Query:  342 YLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGGN-----ARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAI---ISHINVI--RRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEE--FEDSPQDSD 1196
            YLK  + LL+E+VN+G              G  G       ++ S+    E  +         L+++ AKLI + E VE RY++Y+ QM+ ++SSFE  AGLG+A SYT +ALQ +S+ F  ++D I   I  IN +  +++F   L ++ +                        M      AWRP RGLPE +V++LR+WLFEHFLHPYP D +K+MLA QTGLTK+QV                                SNWFINARVR+WKP++EE+Y EE   E+S + SD
Sbjct:   82 YLKAAQELLNEIVNVGN-------------GSHGAKQERPVSKESTIYGVEDINGGYKPGVAALQMKKAKLISMGEMVEQRYKQYHDQMQTIISSFEQAAGLGSANSYTHMALQTISKQFRAVKDMISLQIKQINKLLGQKEFDEQLKKLGK------------------------MAHHHSNAWRPQRGLPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQV--------------------------------SNWFINARVRMWKPLVEELYSEEMDIEESRKGSD 309          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH1_ARATH (BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.642e-44
Identity = 116/313 (37.06%), Postives = 151/313 (48.24%), Query Frame = -1
Query:  396 IVNSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRG--GNAR-------------------LSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVI-------------------RRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPR-QRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKP 1211
            +V+S+YLK  + LL E+VN    + D N   +L+   +G  GN +                    + +   E  + E      E++++ AKL  +L EVE RY +Y+QQM+ V+SSFE  AG+G+AKSYT+LAL+ +SR F  L++AI   I                      R KF     R  R L QL                  GMI      AWRP RGLPE +V++LR WLFEHFLHPYP DS+K MLA QTGLT++QV                                SNWFINARVRLWKP
Sbjct:  190 LVSSKYLKAAQELLDEVVN--ADSDDMNAKSQLFSSKKGSCGNDKPVGESSAGAGGEGSGGGAEAAGKRPVELGTAE----RQEIQMKKAKLSNMLHEVEQRYRQYHQQMQMVISSFEQAAGIGSAKSYTSLALKTISRQFRCLKEAIAGQIKAANKSLGEEDSVSGVGRFEGSRLKFVDHHLRQQRALQQL------------------GMIQHPSNNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQV--------------------------------SNWFINARVRLWKP 446          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH9_ARATH (BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana GN=BLH9 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.484e-43
Identity = 129/365 (35.34%), Postives = 177/365 (48.49%), Query Frame = -1
Query:  369 LSLSLGSHMLDPSLNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIG-GKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAI-----ISHINVI--RRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEE 1439
            LSLSL SH   P L   +  P  +          N G      + N    T AS S+          G    +A+ +  SR+LKP + LL E  N+G G   D+              + L  +   E           +   + +KLI +L+EV  RY++YY+Q++ V+ SFE +AGLG A  Y  LAL+A+S+HF  L++AI      SH N I  +++  H +   N+  S L     DS +   S  Q+ G        WRP RGLPE +V +LR WLF+HFLHPYPTD++KLMLA QTGL++NQV                                SNWFINARVR+WKPM+EE++  E
Sbjct:  115 LSLSLSSH---PRLAYDLVVPGVV----------NSGFCRSAGEANAAAVTIASRSSG-------PLGPFTGYASILKGSRFLKPAQMLLDEFCNVGRGIYTDKVIDDDD--------SSLLFDPTVENLCGVSDGGGGDNGKKKSKLISMLDEVYKRYKQYYEQLQAVMGSFECVAGLGHAAPYANLALKALSKHFKCLKNAITDQLQFSHNNKIQQQQQCGHPMNSENKTDS-LRFGGSDSSRGLCSAGQRHGFPDHHAPVWRPHRGLPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQV--------------------------------SNWFINARVRVWKPMVEEIHMLE 418          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 7.361e-43
Identity = 113/295 (38.31%), Postives = 155/295 (52.54%), Query Frame = -1
Query:  375 NSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEM------LLPEN--ELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDL-------PRINRGLSQLS---LFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYK 1205
            NS+Y KP + LL E  ++G  +  +N   KL   +   N            S         L P +  E + R  KL+ +LEEV+ RY  Y +QM+ VV+SF+ + G GAA  YT LA +AMSRHF  L+DA+      ++ K S +L          + GL++     L   +    +Q     +GM+  +++AWRP RGLPE SV ILR WLFEHFL+PYP+D++K +LA QTGL++NQV                                SNWFINARVRLWKPM+EEMY+
Sbjct:  240 NSKYTKPAQELLEEFCSVGRGHFKKN---KLSRNNSNPNTTGGGGGGGSSSSAGTANDSPPLSPADRIEHQRRKVKLLSMLEEVDRRYNHYCEQMQMVVNSFDQVMGYGAAVPYTTLAQKAMSRHFRCLKDAV-----AVQLKRSCELLGDKEAAGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMM--EQEAWRPQRGLPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLSRNQV--------------------------------SNWFINARVRLWKPMVEEMYQ 492          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 1.052e-42
Identity = 113/297 (38.05%), Postives = 154/297 (51.85%), Query Frame = -1
Query:  372 NSRYLKPTESLLHELVNIGGKNVDENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPEN---------ELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDL--PRINRGLSQLSLFXXXX--------XXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKE 1205
            NSRY    + LL E  ++G       F  K  LG+         +      S+     E+         E + R  KL+ +LEEV+ RY  Y +QM+ VV+SF+ + G GAA  YTALA +AMSRHF  L+DA+ + +     K S +L   +   G+S   L   ++           +     Q+GM+  +++AWRP RGLPE SV ILR WLFEHFLHPYP+D++K +LA QTGL++NQV                                SNWFINARVRLWKPM+EEMY++
Sbjct:  315 NSRYTTAAQELLEEFCSVG-----RGFLKKNKLGNSSNPNTCGGDGGGSSPSSAGANKEHPPLSASDRIEHQRRKVKLLTMLEEVDRRYNHYCEQMQMVVNSFDIVMGHGAALPYTALAQKAMSRHFRCLKDAVAAQL-----KQSCELLGDKDAAGISSSGLTKGETPRLRLLEQSLRQNRAFHQMGMM--EQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQV--------------------------------SNWFINARVRLWKPMVEEMYQQ 567          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: A0A059BQ86_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01858 PE=4 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.869e-122
Identity = 248/502 (49.40%), Postives = 307/502 (61.16%), Query Frame = -1
Query:  294 MVSRDSPPNPTSSMLHHFIVSDPINSRNQFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSPIVTDESDISQTRHLMDLLGAANETNHQTQRLSLSLGSHMLDPSL---------NSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLG-DRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQ 1757
            MV+ +SPP+P  +  H FI  +     +QF G    +YGS LR N+  F + +G +P+I    ERM RS++L+ SP+   ES I+ TRHLMDLL  AN  N Q   L+LSL S + +P+           +   SPSY++   E REAC+              + FAS S   +R   T+Y   +   + I NS YLKP +SLL E+V+I G   +   E +  KLY G +R     L SELK EF  N  L PE +EL+ +LAKL+ LLEEVE R+ KYY  MEEV  SFES+AGLGAAKSYTALALQAM+RHF  LRDAI+S I + R K   D  RI+ GLS+LSLF+R+ RQ +++  QQLG++  QRQAWRPIRGLPETS+AILR+WLFEHFLHPYP DSEKLMLASQTGLTKN                                QISNWFINARVRLWKPMIEEMYKEE  DS +DS+P    S      ITD+
Sbjct:    1 MVTHESPPDPMPTAWHRFIPCE-----SQFEGPDLSSYGSALR-NNTAFFEPIGAVPSIQYHRERMPRSINLVHSPVTVAESHITHTRHLMDLLEVANVPN-QAHSLTLSLNSPLPEPNTVQFGHRPLGGTDFNSPSYVVP-GESREACDAS----------NDSEFASSSAPRNRQCFTSY-RPDLVPSIIGNSTYLKPAQSLLEEIVSICGNGAEIANEKYLRKLYGGAERKATLGLVSELKEEF-GNIGLPPEKHELQAKLAKLVSLLEEVEARFMKYYFHMEEVALSFESVAGLGAAKSYTALALQAMTRHFCNLRDAIVSQIKITRIKLFDDSSRISCGLSRLSLFNRECRQKQRNSLQQLGLMHGQRQAWRPIRGLPETSLAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKN--------------------------------QISNWFINARVRLWKPMIEEMYKEEIADSSEDSNPLIKGS------ITDE 444          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: M0ZWL8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003750 PE=4 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 7.799e-121
Identity = 249/498 (50.00%), Postives = 307/498 (61.65%), Query Frame = -1
Query:  285 MVSRDSPPNPTSSMLHHFIVSDPINSRNQFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSP-IVTDESDISQTRHLMDLLGAANE--TNHQTQRLSLSLGSHMLDPSLNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFC-SNEMLLPENELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1757
            MVS+DSPP   SS+LH FI SD I + +Q G Q FD Y S    +  T  Q  G L          SRS++ +  P   TD  D++ +RHLMDLLGA+++  TN Q QRLSLSLGSH L  S     T+PSY+          N  +    ++Y+F+       + ++++S     G  ESF +AI NS+YLKPT+SLL ELV IGGK +D   E F  +L    + G+  L + LK E   SNE+    +EL +++ KLI LLEEVE RYE+YYQ MEEV S+FE +A  GA K+YT LALQAMSRHF  LRDAIIS INVIR+K   D+P+I+ GLS LSLF        +   QQLG+I   RQAWRPIRGLPETSVAILR+WLFEHFLHPYP DSEKLML+SQTGL+KNQV                                SNWFINARVRLWKPMIEEMYKEEF +S  +SD     + + REG+TD AE+
Sbjct:    1 MVSKDSPPPSHSSILHQFINSDSIMT-SQIGSQHFDMYQS----DTTTAYQPHGGL----------SRSIEFVNHPDFTTDSHDVNHSRHLMDLLGASHDANTNQQAQRLSLSLGSHSLVSSF----TNPSYM----------NQEIDQRNNEYSFS-------AAAMNQSFSNVCGT-ESFVSAIGNSKYLKPTQSLLEELVCIGGKTIDSSNEKFIRRLSRNSKKGSLSLRAMLKGEIPPSNELFNERHELYVKIMKLIVLLEEVERRYEQYYQHMEEVTSTFEVIAAFGAGKAYTVLALQAMSRHFCCLRDAIISQINVIRQKMLRDVPKISSGLSHLSLF-EKETLQNRISLQQLGIIQGNRQAWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLSSQTGLSKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFAESSVESD-----NLLNREGVTDSAEE 423          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: K7KHT6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 6.459e-112
Identity = 214/381 (56.17%), Postives = 252/381 (66.14%), Query Frame = -1
Query:  285 LNSGITSPSYLLSRAEDREACN-PGVG--NLRDDY--NFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1400
            LN G+ +P+Y +S  E RE CN P V   N+  DY  N    TFAS S   +RS  +T     S+A  I NSRYLKP +SLL +LV++GG  VD   E +  KL+ G RG    LSSELKAE  +N  LL + +E +I++A+LI LL+EVE R EKYY QMEEVVSSFE +AGLGAAK YTALALQAMSRHF  LRDAI+S IN  +RK   DLP+I+ GLSQLSLF     +  +   QQLG+I  QRQ WRPIRGLPETSVAILR+WLFEHFLHPYP DSEKLMLASQTGLTKNQV                                SNWFINARVRLWKPMIEEMYKEEF +  +DS+P+  ++ + RE  TD  ED
Sbjct:   14 LNPGLINPNYFMSGQEAREPCNNPPVEQHNITSDYFYNTGSGTFASSSPLNNRSPNST----SSYAAVIGNSRYLKPVQSLLEDLVDVGGNVVDRINEKYAEKLFRGSRGSARTLSSELKAELGNNGHLLADKHEHQIKIARLITLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAILSQINAEKRKLFQDLPKISSGLSQLSLF-DRDSRQSRMSLQQLGVIRSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFGEFSEDSNPA-GNNYLTREDTTDCVED 356          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: K4BVF7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g080780.2 PE=4 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 8.952e-110
Identity = 228/470 (48.51%), Postives = 282/470 (60.00%), Query Frame = -1
Query:  285 QFGGQPFDAYGSTLRGNHNTFPQSLGLLPTIHSLGERMSRSMDLLPSP-IVTDESDISQTRHLMDLLGAANE--TNHQTQRLSLSLGSHMLDPSLNSGITSPSYLLSRAEDREACNPGVGNLRDDYNFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1673
            Q G Q FD Y S    +  T  Q  G L          SRS++ +  P   TD  D++ +RHLMDLLGA+++  TN Q QRLSLSLGSH L  +  +   +PSY+    + R                  N F+  + ++++S     G  ESF +AI NS+YLKPT+SLL ELV IGGK +D   E F  +L    + G+  L + LK E   N  L  E +EL +++ KLI LLEEVE RYE+YYQ MEEV S+FE +AG GA K+YTALALQAMSRHF  LRD+IIS IN IR+K   D+P+I+ GLS LSLF        +   QQLG+I   RQAW+PIRGLPETSVA LR+WLFEHFLHPYP DSEKLML+SQTGL+KNQV                                SNWFINARVRLWKPMIEEMYKEEF +S  +SD     + + RE +TD AE+
Sbjct:    4 QIGSQHFDMYQS----DTTTAYQPHGGL----------SRSIEFVNHPDFTTDSHDVNHSRHLMDLLGASHDANTNQQAQRLSLSLGSHSLVSTFTN---NPSYMNQEIDQRN-----------------NEFSFSAAAMNQSFSNVCGT-ESFVSAIGNSKYLKPTQSLLEELVCIGGKTIDSSNEKFIRRLSRNSKKGSLSLRAMLKGEIPPNNELFNERHELYVKIMKLIALLEEVERRYEQYYQHMEEVTSTFEVIAGFGAGKAYTALALQAMSRHFCCLRDSIISQINFIRQKMPRDVPKISSGLSHLSLF-EKETLQNRISLQQLGIIQSNRQAWQPIRGLPETSVAFLRSWLFEHFLHPYPNDSEKLMLSSQTGLSKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFAESSVESD-----NLLNREAVTDSAEE 400          
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Match: A0A0B2SMZ7_GLYSO (BEL1-like homeodomain protein 11 OS=Glycine soja GN=glysoja_023102 PE=4 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 1.332e-109
Identity = 210/370 (56.76%), Postives = 245/370 (66.22%), Query Frame = -1
Query:  285 LSRAEDREACN-PGVG--NLRDDY--NFTVNTFASPSTSLHRSLLTTYGAAESFATAIVNSRYLKPTESLLHELVNIGGKNVD---ENFFGKLYLGDRGGNARLSSELKAEFCSNEMLLPE-NELRIRLAKLIGLLEEVELRYEKYYQQMEEVVSSFESLAGLGAAKSYTALALQAMSRHFGKLRDAIISHINVIRRKFSHDLPRINRGLSQLSLFXXXXXXXXXXXXXXLGMIPRQRQAWRPIRGLPETSVAILRTWLFEHFLHPYPTDSEKLMLASQTGLTKNQV*SLLSICICSIDDLFLFNPNXXXXXXXVKIQISNWFINARVRLWKPMIEEMYKEEFEDSPQDSDPSFASSSMGREGITDQAED 1367
            +S  E RE CN P V   N+  DY  N    TFAS S   +RS  +T     S+A  I NSRYLKP +SLL +LV++GG  VD   E +  KL+ G RG    LSSELKAE  +N  LL + +E +I++A+LI LL+EVE R EKYY QMEEVVSSFE +AGLGAAK YTALALQAMSRHF  LRDAI+S IN  +RK   DLP+I+ GLSQLSLF     +  +   QQLG+IP QRQ WRPIRGLPETSVAILR+WLFEHFLHPYP DSEKLMLASQTGLTKNQV                                SNWFINARVRLWKPMIEEMYKEEF +  +DS+P+  ++ + RE  TD  ED
Sbjct:    1 MSGQEAREPCNNPPVEQHNITSDYFYNTGSGTFASSSPLNNRSPNST----SSYAAVIGNSRYLKPVQSLLEDLVDVGGNVVDRINEKYAEKLFRGSRGSARTLSSELKAELGNNGHLLADKHEHQIKIARLITLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAILSQINAEKRKLFQDLPKISSGLSQLSLF-DRDSRQSRMSLQQLGVIPSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQV--------------------------------SNWFINARVRLWKPMIEEMYKEEFGEFSEDSNPA-GNNYLTREDTTDCVED 332          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
BLH11_ARATH3.351e-8250.99BEL1-like homeodomain protein 11 OS=Arabidopsis th... [more]
BLH7_ARATH1.850e-6143.89BEL1-like homeodomain protein 7 OS=Arabidopsis tha... [more]
BLH10_ARATH1.374e-6043.65BEL1-like homeodomain protein 10 OS=Arabidopsis th... [more]
BLH3_ARATH5.526e-5943.77BEL1-like homeodomain protein 3 OS=Arabidopsis tha... [more]
BLH6_ARATH1.416e-5643.54BEL1-like homeodomain protein 6 OS=Arabidopsis tha... [more]
BLH5_ARATH2.411e-4736.70BEL1-like homeodomain protein 5 OS=Arabidopsis tha... [more]
BLH1_ARATH9.642e-4437.06BEL1-like homeodomain protein 1 OS=Arabidopsis tha... [more]
BLH9_ARATH3.484e-4335.34BEL1-like homeodomain protein 9 OS=Arabidopsis tha... [more]
BLH4_ARATH7.361e-4338.31BEL1-like homeodomain protein 4 OS=Arabidopsis tha... [more]
BLH2_ARATH1.052e-4238.05BEL1-like homeodomain protein 2 OS=Arabidopsis tha... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0097845 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059BQ86_EUCGR1.869e-12249.40Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
M0ZWL8_SOLTU7.799e-12150.00Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K7KHT6_SOYBN6.459e-11256.17Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K4BVF7_SOLLC8.952e-11048.51Uncharacterized protein OS=Solanum lycopersicum GN... [more]
A0A0B2SMZ7_GLYSO1.332e-10956.76BEL1-like homeodomain protein 11 OS=Glycine soja G... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 250..277
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 177..408
NoneNo IPR availablePANTHERPTHR11850:SF132BEL1-LIKE HOMEODOMAIN PROTEIN 11coord: 177..408
IPR006563POX domainSMARTSM00574prehox3coord: 177..311
e-value: 1.6E-28
score: 110.8
IPR006563POX domainPFAMPF07526POXcoord: 183..309
e-value: 1.8E-33
score: 115.9
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 379..408
e-value: 5.1E-8
score: 32.5
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 361..408
e-value: 1.1E-13
score: 50.0
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 357..408

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097845 ID=g.barbadense_cottongen_reftransV1_0097845; Name=g.barbadense_cottongen_reftransV1_0097845; organism=Gossypium barbadense; type=contig; length=2870bp
CCGTCTTTCATTTCTATCATTTCTTCTTGCAGTAAAACTTGAGTTTTGTT
TTACAGCACGAAATTTAACTGCCCCCAGAACTTTGAATTCCATATCATGC
CGTGAGAAAATATATATAAGAGAGGTAAACTCCACAGTTCCACCATTAAG
CTTCAAAAGATGTATTTGGAGTCTAATTATTTTCATATCAAATGCTGAAA
GGTCATTTGTCAACCATCTGATTAAGCCTAAGAATCTTGGTTACAGAATC
AATCTATTTAAAAGTGATGTTTGCTATCCCTTCAATCCTCAGCTTGATCA
GTGATCCCCTCCCTGCCCATGGAACTGCTAGCAAACGATGGATCAGAATC
TTGAGGAGAGTCTTCAAACTCCTCTTTGTACATTTCTTCTATCATAGGCT
TCCACAATCGAACTCGAGCATTTATAAACCAGTTTGATATCTGAATTTTG
ACAATGATAACAAGCACCAAAATATTGGGATTAAAAAGAAATAAATCATC
AATTGAGCAGATGCAAATGGATAGAAGGGATCATACTTGATTCTTGGTCA
GGCCTGTCTGTGATGCTAACATTAGCTTCTCCGAGTCTGTTGGATAAGGG
TGAAGGAAGTGTTCGAAAAGCCAGGTACGAAGGATGGCTACGGAGGTTTC
TGGCAATCCTCTAATAGGCCTCCAAGCTTGCCTTTGCCTTGGGATCATTC
CAAGTTGTTGTTGAAGGGACTGTCGGTTCTGCCTAGAATCTCTATCGAAC
AGGCTAAGCTGCGACAATCCCCGGTTGATTCTCGGTAAATCGTGCGAAAA
CTTTCTTCTGATAACATTAATATGAGATATTATGGCATCCCTTAGTTTTC
CAAAATGCCTGGACATTGCTTGGAGTGCCAAAGCAGTGTACGACTTTGCT
GCTCCTAAACCAGCTAGCGACTCGAATGATGAAACCACTTCTTCCATTTG
CTGGTAGTATTTCTCATATCTGAGCTCAACCTCCTCCAGTAATCCAATCA
GCTTTGCAAGCCTAATTCGGAGCTCGTTTTCGGGCAATAGCATCTCATTA
CTGCAGAATTCTGCTTTTAGTTCAGAGGAAAGTCTTGCATTTCCTCCTCT
GTCGCCTAGATATAACTTCCCAAAGAAATTTTCGTCGACATTTTTGCCAC
CAATATTGACAAGTTCATGTAGGAGGGACTCAGTTGGCTTTAGATACCTC
GAATTCACTATAGCAGTGGCAAATGATTCTGCTGCTCCATACGTAGTCAA
TAGGGATCGGTGCAGTGAGGTGGAAGGTGAAGCAAATGTGTTAACTGTGA
AATTGTAGTCATCCCTTAAGTTTCCCACGCCTGGATTACAAGCTTCTCTA
TCTTCAGCCCTGGAAAGCAAGTAACTAGGACTTGTAATACCAGAATTTAA
GGAAGGATCAAGCATGTGAGAACCGAGAGATAGTGACAGCCTTTGGGTTT
GGTGGTTGGTCTCGTTAGCTGCTCCAAGAAGGTCCATCAAGTGTCTGGTC
TGGCTAATATCTGATTCATCAGTGACAATGGGAGATGGAAGGAGATCCAT
CGATCTGGACATTCTTTCCCCGAGAGAATGAATGGTAGGCAATAAACCAA
GGGACTGGGGAAATGTGTTGTGGTTGCCTCTCAAAGTAGAGCCATAGGCA
TCAAAAGGTTGACCTCCGAATTGGTTTCGGCTATTAATAGGATCCGAGAC
GATAAAATGGTGCAGCATACTGGAAGTTGGATTTGGAGGTGAATCTCGGG
AAACCATAGTGACAGAAATGGAAGCTAAAGGTTTTGAAAGTTGCTAATTG
ACCTTCAAATGCGAGGAGAAGAAATTATTTATCAAGAATCTGGAAGAACA
GTGAGTCAACTAGAATTATTGAGCCATACACATACATACGGAAAGTAAAA
GCAGAGGCAAATTACCATTCCGCGTGAAAAGCATTAAAAGCGAGTTAGGA
ATTAGATAAGACTCTGCTTGAAACAAGGTGGATATATTCATCAACAGATG
ACAAAAAACAAATATGAAAGCTGCTGGGCATTAAACACAGGGCCACCTGA
ATTAATATGGCTGACAAAATTGAAATGGAAACTCTGTGCTGACTTTTGCA
CCCAATGCAGCCGAGATCTAAAGCCACAAATCATGCGATCATAATAAGAT
CCCTAGCCGTAAGCAAGACTTAACCTTGAAAAGAAAACCCTTCAAAACTA
AGCTGATGGGAACCAGGAGAAAGGGAGGGGAAATGCAGTAAAAAATAATG
TAGCCAAGTGATGTGTTAAAAGCATGGATGGAATGAAGTAAACGAATGGT
ATTACTGAAAACAAGACAAAGAAATAAAAAAAAAAACTAAGGAGCCATTT
GTAAGTAACTGAAGACCTGATTCGGATAGATTAACTTTAAGGAACTAACA
ATAAAACCAAAAAGATAATGGAAGTAACCTGTCTTTAATAAGCATAAAAA
ATGGAAGGGAAAGTAAGTAACAAAGCATCCATCTGAATGTGGAAAACTGC
AAATGTACCTTTGTTCATAGTAGCAACAAATGTTAATAAGGCTTTAGAGG
AAAACAATGACTTTTTATCTTACTTCTCTGGGGGAAAAGAAAAAGAATAG
GTCTAATAGACTAATATACTAAGCAGCCAAAACCTATTAGACCTATAGAT
TCATAGGCCTCTGCTAGTTCTTCAAAAAGGCAAAGCTAATTGGCTGAGAA
GAAATGAATAAGACGTCAGGGAAAGATGGTCCCCGACTTCTTCCCTGACT
ATAAAACAAGCAAAAGCATCAATCCTTCAGCTTTAATGCCTGCATTTACA
TTTCTTTGGGAGACTCAAAAGTAGTTTGAGCTCAAAAACTGTGTAAACTC
TCTCTCTCTCTCTCTCTCGC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR006563POX_dom
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding