g.barbadense_cottongen_reftransV1_0097844, g.barbadense_cottongen_reftransV1_0097844 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: W9SAN6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023073 PE=4 SV=1) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 306/418 (73.21%), Postives = 357/418 (85.41%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNV-ALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGXXXXXXXXXXX-----XLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 LQ +LDS+RPFLRG+L+ +D+ LP+LVAVLRSVGAGECWHKHGSFL+HLVD YRILK+WKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVV VG+AAERLIHLFCVVPRQ LIHDDLLF Y+++E++EHL SE+S++NAKE+GVF+ +E WR K+ ++P +G VKHIK GEDV VSRR++A+FLMMTMADFSDQ++GFQD LFEN++GRLEF GNN LWPG+GKPGLW+NSISRMGA+YSLI+REEEIFVE+RKR G + ELV+PPVFE+C+K+L A +QI ARDLYWEAVCD SK G ER EELLL +EKNPFVGEPHVVL QVYL K FEEAE+EAEKGL L+L+W SPWDKRMSWEGW+AW RVL MKAKE+SWPQT+WG+LNLGLVK Sbjct: 20 LQTVLDSARPFLRGDLESIDEKLPSLVAVLRSVGAGECWHKHGSFLDHLVDTYRILKLWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVAKLVGEAAERLIHLFCVVPRQSLIHDDLLFHYSETELLEHLKFSEISVRNAKERGVFDGEEGWRKKLNCVLPSDGVVVKHIKNGEDVKVSRRLVAVFLMMTMADFSDQIFGFQDALFENYNGRLEFKGNNVAGGLWPGDGKPGLWMNSISRMGALYSLIVREEEIFVEERKRACGDHDHDHDHDQRDDEDLELVIPPVFENCTKILDAGDQIVARDLYWEAVCDVSKRGLERTEELLLRCVEKNPFVGEPHVVLGQVYLGKMMFEEAEREAEKGLRLILEWGSPWDKRMSWEGWVAWARVLVMKAKEKSWPQTAWGILNLGLVK 437
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: Q0WTF1_ARATH (Putative uncharacterized protein At3g19990 (Fragment) OS=Arabidopsis thaliana GN=At3g19990 PE=2 SV=1) HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0 Identity = 311/412 (75.49%), Postives = 361/412 (87.62%), Query Frame = 2 Query: 236 LDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRV--SGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDS--KGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 L+S+RPFLRGEL+ +D LP+L+AVL+SVGAGECWHKHGSFL+HL+DIY+ILK+WKA +SVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVR HVG+AAE LIHLFCVVPRQ LIHD+LLFKY+D E+VEHL SEVSL+NAKEKG+F+ DE WR KI LVPENG VKHIKTGE+++VSRRV+ +FL+MTMADFSDQL+GFQD LF N DGRLEF GNN ALWPGNGKPGLW+NS SRMGAIYSLI+REEEI +E+R+R SG E+ +RDEDI+LVVPPVF C+KVL AKEQIEAR++YWE V D+ +G ERAEE LLG IEKNPFVGEPHV+L+QVYL K RF+EAE+EAEKGL+L+LQW SPWDKRMSWEGWIAW RVL MK+++QSWP SWG+LNLGLV+ Sbjct: 1 LESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRDHVGEAAESLIHLFCVVPRQTLIHDELLFKYSDCELVEHLDCSEVSLRNAKEKGIFDGDEEWRKKINALVPENGVVVKHIKTGEEIVVSRRVVGVFLLMTMADFSDQLFGFQDELFCNHDGRLEFRGNNVTALWPGNGKPGLWMNSNSRMGAIYSLIVREEEILMEERRRAFGSGFEVRKERDEDIDLVVPPVFSFCTKVLDAKEQIEAREMYWEVVSSDTSKEGYLERAEERLLGCIEKNPFVGEPHVLLSQVYLGKKRFKEAEREAEKGLLLLLQWGSPWDKRMSWEGWIAWVRVLLMKSQDQSWPDVSWGILNLGLVR 412
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: V4LVM2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10020793mg PE=4 SV=1) HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0 Identity = 311/413 (75.30%), Postives = 360/413 (87.17%), Query Frame = 2 Query: 233 LLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGX--XXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDD--SKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 +L+ +RPFLRGEL+ +D LP+L+AVL+SVGAGECWHKHGSFL+HL+DIY+ILK+WKA +SVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVR HVG+AAE LIHLFCV+PRQ LIHDDLLF Y+D E+VEHL SEVSL+NAKEKGVF+ DEAWR K+ LVPENG +KHIKTGE++LVSRRV+ +FL+MTMADFSDQL+GFQD LF N DGRLEF GNN ALWPGNGKPGLWLNS SRMGAIYSLI+REEEI +E+RKR SG + +RDEDIELV+PPVF C+KVL AKEQIEARD+YWEAV D +G ERAEE LLG IEKNPFVGEPHV+L+QVYL K RF+EAE+EAE+GL+L+LQW SPWDKRMSWEGW+AW RVL MK+++QSWP SWG+LNLGLV+ Sbjct: 13 VLELARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRDHVGEAAESLIHLFCVIPRQSLIHDDLLFNYSDPELVEHLDCSEVSLRNAKEKGVFDGDEAWRKKLNALVPENGVVLKHIKTGEEILVSRRVVGVFLLMTMADFSDQLFGFQDELFCNHDGRLEFRGNNATALWPGNGKPGLWLNSNSRMGAIYSLIVREEEILMEERKRASGSGFVLRRERDEDIELVLPPVFSFCTKVLDAKEQIEARDMYWEAVSSDPSKEGYLERAEERLLGCIEKNPFVGEPHVLLSQVYLGKKRFKEAEREAERGLLLLLQWGSPWDKRMSWEGWVAWVRVLLMKSQDQSWPDVSWGILNLGLVR 425
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: A0A078GJK2_BRANA (BnaA05g19170D protein OS=Brassica napus GN=BnaA05g19170D PE=4 SV=1) HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0 Identity = 306/413 (74.09%), Postives = 357/413 (86.44%), Query Frame = 2 Query: 233 LLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGX--XXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDS--KGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 +L +RPFLRGEL+ ++ LP+L+AVL+SVGAGECWHKHG+FL+HLVD+Y+ILK+WKA + VCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVG+AAE L+HLFCV+PRQ LIHDD+LFKY+D E+VEHL SEVSL+NAKEKGVF+ +E WR K+ GLVPENG VKHIKTGE++LVSRRV+ +FL++TMADFSDQ +GFQD LF N DGRLEF GNN ALWPGNGKPGLW+NS SRMGAIYSLI+REEEI +EQRKR G +RDEDIELVVPPVF C+KVL AKEQIEARD+YWEAV D+ +G ERAE++LLG IEKNPFVGEPHV+L+QVYL K RF EAE+EAE+GL+L+LQW SPWDKRMSWEGWIAW RVL MK+ +QSWP SWG+LNLGLV+ Sbjct: 9 VLQLARPFLRGELEKINPKLPSLMAVLKSVGAGECWHKHGNFLDHLVDVYKILKLWKAPEPVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGEAAESLVHLFCVIPRQTLIHDDVLFKYSDLELVEHLELSEVSLRNAKEKGVFDGEEVWRKKLNGLVPENGVVVKHIKTGEEILVSRRVVGVFLLITMADFSDQFFGFQDELFCNNDGRLEFRGNNVTALWPGNGKPGLWMNSSSRMGAIYSLIVREEEILMEQRKRGYGSEFVARKERDEDIELVVPPVFSFCTKVLDAKEQIEARDMYWEAVSSDASKEGYLERAEKMLLGCIEKNPFVGEPHVLLSQVYLGKKRFVEAEREAERGLVLLLQWGSPWDKRMSWEGWIAWVRVLLMKSHDQSWPDVSWGILNLGLVR 421
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: R0I2Q8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10013769mg PE=4 SV=1) HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0 Identity = 309/413 (74.82%), Postives = 357/413 (86.44%), Query Frame = 2 Query: 233 LLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGX--XXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDS--KGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 LL+S+RPFLRGEL+ +D LP+L+AVL+SVGAGECWHKHGSFL+HL+DIY+ILK+WKA +SVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVR HVG+AAE LIHLFCVVPRQ LIHDDLLFKY+D E+VEHL SEVSL+NAKEKGVF+ DE WR K+ GLVPENG VKHIKTGE+++VSRRV+A+FL+MTMADFSDQL+GFQD LF N DGRLEF GNN ALWPGNGKPGLW+NS SRMGAIYSLI+REEEI +EQR+RVSG + +RDEDI+LV+PPVF C+K IEAR++YWE V D+ +G ERAEE LLG IEKNPFVGEPHV+L+QVYL K RF+EAE EAEKGL+L+LQW SPWDKRMSWEGWIAW RVL MK+++QSWP SWG+LNLGLV+ Sbjct: 14 LLESARPFLRGELEKIDPKLPSLIAVLKSVGAGECWHKHGSFLDHLIDIYKILKLWKAPESVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRDHVGEAAESLIHLFCVVPRQTLIHDDLLFKYSDRELVEHLRCSEVSLRNAKEKGVFDGDEEWRKKMNGLVPENGVAVKHIKTGEEIIVSRRVVAVFLLMTMADFSDQLFGFQDELFCNHDGRLEFRGNNVTALWPGNGKPGLWMNSNSRMGAIYSLIVREEEILMEQRRRVSGSGLVLRKERDEDIDLVLPPVFSFCTK-------IEAREMYWEVVSSDTSKEGYLERAEERLLGCIEKNPFVGEPHVLLSQVYLGKKRFKEAEGEAEKGLLLLLQWGSPWDKRMSWEGWIAWVRVLLMKSQDQSWPDVSWGILNLGLVR 419
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: A0A068V8K8_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_141 OS=Coffea canephora GN=GSCOC_T00004822001 PE=4 SV=1) HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0 Identity = 302/414 (72.95%), Postives = 358/414 (86.47%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSG--XXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 L LL +RPFLRGEL+ VDKNLP LV+VLRSVGAGECWHKHGSFLEHL DIYRILK+WKA D+VCLCGLFHSAYSNSYVNLAIFDPSTGRDVVR HV +A ERLIH+FC+VPR PLIHDDLLF Y D E+ EHL SE+SL+NAKEKG+FNE+E+WR K+R ++P +G VKHI+TGE+V VSRR++A+FL+MTMADFSDQL+GFQDVLFEN +GRLEF GNN LWPGNGKPGLWLNSISRMGA+Y+LI REEEIF+EQR+R +G I + DRDE++ELV+PPVFE+C++VL A+EQ R+LYWEAV + K G ERAEELL+ +IEKNPFVGEPHVVL Q+YL+KGRFEE EKEA+KGL ++L+W SPWDKRMSWE W+AW R+L +K KE+SWP TSWG++ LGL+K Sbjct: 13 LNDLLQLARPFLRGELENVDKNLPYLVSVLRSVGAGECWHKHGSFLEHLFDIYRILKLWKAPDAVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRSHVQEAVERLIHMFCIVPRHPLIHDDLLFHYDDQELDEHLKFSEISLRNAKEKGLFNEEESWRVKLRSVLPADGVVVKHIRTGEEVPVSRRLVAVFLLMTMADFSDQLFGFQDVLFENSNGRLEFSGNNFYGLWPGNGKPGLWLNSISRMGALYTLIAREEEIFLEQRRRNNGGVIVLADDRDEELELVIPPVFENCTRVLDAEEQKIGRELYWEAVFEGDKIGLERAEELLIRAIEKNPFVGEPHVVLGQIYLSKGRFEEGEKEAQKGLRMILEWGSPWDKRMSWEAWVAWARLLVIKGKEKSWPNTSWGIIELGLIK 426
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: M4F429_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra035829 PE=4 SV=1) HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0 Identity = 305/413 (73.85%), Postives = 356/413 (86.20%), Query Frame = 2 Query: 233 LLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGX--XXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDS--KGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 +L +RPFLRGEL+ ++ LP+L+AVL+SVGAGECWHKHG+FL+HLVD+Y+ILK+WKA + VCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVG+AAE L+HLFCV+PRQ LIHDD+LFKY+D E+VEHL SEVSL+NAKEKGVF+ +E WR K+ GLVPENG VKHIKTGE++LVSRRV+ +FL++TMADFSDQ +GFQD LF N DGRLEF GNN ALWPGNGKPGLW+NS SR GAIYSLI+REEEI +EQRKR G +RDEDIELVVPPVF C+KVL AKEQIEARD+YWEAV D+ +G ERAE++LLG IEKNPFVGEPHV+L+QVYL K RF EAE+EAE+GL+L+LQW SPWDKRMSWEGWIAW RVL MK+ +QSWP SWG+LNLGLV+ Sbjct: 9 VLKLARPFLRGELEKINPKLPSLIAVLKSVGAGECWHKHGNFLDHLVDVYKILKLWKAPEPVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGEAAESLVHLFCVIPRQTLIHDDVLFKYSDLELVEHLELSEVSLRNAKEKGVFDGEEVWRKKLNGLVPENGVVVKHIKTGEEILVSRRVVGVFLLITMADFSDQFFGFQDELFCNNDGRLEFRGNNVTALWPGNGKPGLWMNSSSRTGAIYSLIVREEEILMEQRKRGYGSEFVARKERDEDIELVVPPVFSFCTKVLDAKEQIEARDMYWEAVSSDASKEGYLERAEKMLLGCIEKNPFVGEPHVLLSQVYLGKKRFVEAEREAERGLVLLLQWGSPWDKRMSWEGWIAWVRVLLMKSSDQSWPDVSWGILNLGLVR 421
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: A0A068VBD0_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_141 OS=Coffea canephora GN=GSCOC_T00004818001 PE=4 SV=1) HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0 Identity = 309/414 (74.64%), Postives = 363/414 (87.68%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSG--XXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 L LL +RPFLRGEL+ VDKNLP+LV+VLRSVGAGECWHKHGSFLEHLVDIYRILK+WKA D+VCLCGLFHSAYSNSYVNLAIFDPSTGRDVVR HVG+AAERLIH+FC+VPRQPLIHDDLLF Y D E+VEHL SE+SL+NAKEK +FNEDE+WR K+ ++P +G VKHIKTGE+V VSRR++A+FL+MTMADFSDQL+GFQDVLFEN +GRLEF GNN LWPG+GKPGLWLNSISRMGA+Y+LI+REEEI +EQR+R +G I + DRDE++ELV+PPVFE+C++VL A+EQ R+LYWEAVC+ K G RA ELL+ +IEKNPFVGEPHVVL Q+YL+KG+FEE EKEAEKGL ++L+W SPWDKRM+WEGW+AW RVL MKAKE+SWP TSW +LNLGLVK Sbjct: 13 LHDLLQLARPFLRGELENVDKNLPSLVSVLRSVGAGECWHKHGSFLEHLVDIYRILKLWKAPDAVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRSHVGEAAERLIHMFCIVPRQPLIHDDLLFHYNDQELVEHLKFSEISLRNAKEKDLFNEDESWRRKLNSVLPADGVVVKHIKTGEEVPVSRRLVAVFLLMTMADFSDQLFGFQDVLFENSNGRLEFSGNNFYGLWPGDGKPGLWLNSISRMGALYTLIVREEEIILEQRRRNNGGVIVLADDRDEELELVIPPVFENCTRVLDAEEQKIGRELYWEAVCEAEKVGLRRAVELLIRAIEKNPFVGEPHVVLGQIYLSKGKFEEGEKEAEKGLRMILEWGSPWDKRMTWEGWVAWARVLVMKAKEKSWPNTSWAILNLGLVK 426
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: F6HVZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g00810 PE=4 SV=1) HSP 1 Score: 617.846 bits (1592), Expect = 0.000e+0 Identity = 319/412 (77.43%), Postives = 367/412 (89.08%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 LQ LL S+RPFLRGEL+ V LP+L++VLRSVGAGECWHKHGSFLEHL D+Y+ILK+WKAQ+SVCLCGLFHSAYSNSYVNLAIFDPSTGRD VR HVGDAAE LI+LFCVVPRQPLIHDDLLF+Y+D E+VEHL ASEVS++NAKE GVFN DEAWR K+ LVP G TVKHIKTGEDVLVSRRV+AIF+MMTMADFSDQLYGFQD LF+N +G+LEF GN+ ALWPG+GKPGLWLNSISRMGA+YSL++REEEIF+E+RKRV G ++ RDE++ELV+PPV E+C++VLGA+EQIEA DLYWEAVC+ SK G + AE+LL +EKNPFVGEPHVVLAQ+YLT GRFEEAE+EAEKGL LML+W +PWDKRM+WEGWIAW RVL MKAKE+SWP TSWG+LNLGLVK Sbjct: 15 LQTLLASARPFLRGELEAVHPKLPSLISVLRSVGAGECWHKHGSFLEHLFDMYKILKLWKAQESVCLCGLFHSAYSNSYVNLAIFDPSTGRDTVRAHVGDAAEELIYLFCVVPRQPLIHDDLLFRYSDDELVEHLKASEVSVRNAKEGGVFNGDEAWRKKVNSLVPPGGVTVKHIKTGEDVLVSRRVVAIFVMMTMADFSDQLYGFQDALFDNSNGQLEFSGNSFGALWPGDGKPGLWLNSISRMGAVYSLLVREEEIFIEERKRVGGDQVVKGRDEELELVIPPVLENCTRVLGAEEQIEATDLYWEAVCEGSKRGLDWAEKLLGRCVEKNPFVGEPHVVLAQIYLTNGRFEEAEREAEKGLKLMLEWGNPWDKRMTWEGWIAWNRVLLMKAKERSWPNTSWGILNLGLVK 426
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Match: F6HVY9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g00840 PE=4 SV=1) HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0 Identity = 319/412 (77.43%), Postives = 367/412 (89.08%), Query Frame = 2 Query: 224 LQALLDSSRPFLRGELQYVDKNLPNLVAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAQDSVCLCGLFHSAYSNSYVNLAIFDPSTGRDVVRGHVGDAAERLIHLFCVVPRQPLIHDDLLFKYTDSEIVEHLAASEVSLKNAKEKGVFNEDEAWRNKIRGLVPENGHTVKHIKTGEDVLVSRRVLAIFLMMTMADFSDQLYGFQDVLFENFDGRLEFVGNNNVALWPGNGKPGLWLNSISRMGAIYSLILREEEIFVEQRKRVSGXXXXXXXXXXXXLVVPPVFEHCSKVLGAKEQIEARDLYWEAVCDDSKGGQERAEELLLGSIEKNPFVGEPHVVLAQVYLTKGRFEEAEKEAEKGLILMLQWSSPWDKRMSWEGWIAWGRVLWMKAKEQSWPQTSWGVLNLGLVK 1459 LQ LL S+RPFLRGEL+ V LP+L++VLRSVGAGECWHKHGSFLEHLVD+Y+ILK+WKAQ+SVCLCGLFHSAYSNSYVNLAIF+PSTGRD VR HVGDAAE LI+LFCVVPRQPLIHDDLLF+Y+D E+VEHL ASEVS++NAKE GVFN DEAWR K+ LVP G TVKHIKTGEDVLVSRRV+AIF+MMTMADFSDQ YGFQD LF+N +GRLEF GN+ ALWPG+GKPGLWLNSISRMGA+YSL++REEEIF+E+RKRV G ++ RDE++ELV+PPV E+C++VLGA+EQIEA DLYWEAVC+ SK G + AE+LL +EKNPFVGEPHVVLAQ+YLT GRFEEAE+EAEKGL LML+W +PWDKRM+WEGWIAW RVL MKAKE+SWP TSWG+LNLGLVK Sbjct: 15 LQTLLASARPFLRGELEAVHPKLPSLISVLRSVGAGECWHKHGSFLEHLVDMYKILKLWKAQESVCLCGLFHSAYSNSYVNLAIFEPSTGRDTVRAHVGDAAEELIYLFCVVPRQPLIHDDLLFRYSDDELVEHLKASEVSVRNAKEGGVFNGDEAWRKKVNSLVPPGGVTVKHIKTGEDVLVSRRVVAIFVMMTMADFSDQHYGFQDALFDNSNGRLEFSGNSYGALWPGDGKPGLWLNSISRMGAVYSLLVREEEIFIEERKRVGGDQVVKGRDEELELVIPPVLENCTRVLGAEEQIEATDLYWEAVCEGSKRGLDWAEKLLGRCVEKNPFVGEPHVVLAQIYLTNGRFEEAEREAEKGLKLMLEWGNPWDKRMTWEGWIAWNRVLLMKAKERSWPNTSWGILNLGLVK 426 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0097844 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097844 ID=g.barbadense_cottongen_reftransV1_0097844; Name=g.barbadense_cottongen_reftransV1_0097844; organism=Gossypium barbadense; type=contig; length=1881bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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