g.barbadense_cottongen_reftransV1_0097666, g.barbadense_cottongen_reftransV1_0097666 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0097666
Unique Name	g.barbadense_cottongen_reftransV1_0097666
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	1912

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Dt09	chromosome	g.barbadense_cottongen_reftransV1_0097666:1..1912 . Dt09:40435546..40450560 +		n/a

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy Swiss-Prot
Match: GPT_SULAC (Putative UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=gnpTA PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 4.511e-8
Identity = 56/181 (30.94%), Postives = 88/181 (48.62%), Query Frame = 2

Query:  620 LGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWV-YKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLL 1159
            LG +DD+ ++    +  LP  A++PL++   GHT I IP     ++G+  ++ G + Y + +        N+ N+  GLNGL  G  +++A A     L  IG  S      A   SI L   L       L +N+YP+  F G+  TYF G  +  +GI G+    L   +LP V+ F+L
Sbjct:   95 LGLLDDIFNISQATRAFLPIFASIPLILYSVGHTIISIP-----FLGK--VNFGILFYIIILPATLTITANAFNMLEGLNGLGAGMGLIMALA-----LAYIGLKSGGTSFYAGIVSIILASVLFG----FLIFNFYPAKTFPGNIGTYFIGSVIGSIGISGYMYTALFFLYLPYVIEFVL 259

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy Swiss-Prot
Match: MRAY_CLOTH (Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) GN=mraY PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.985e-7
Identity = 51/182 (28.02%), Postives = 86/182 (47.25%), Query Frame = 2

Query:  617 LLGFVDDVLDVP--------WRVKXXXXXXXXXXXXMAYAGHT---TIIIPKPLISYVGQE-VLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLI 1126
            L+GF+DD + V         W  K+    + A+   + Y  HT    IIIP     ++G +  + LGW++  ++ L+ +  TN++NI  GL+GL  G T+++           I A +  E++    FS  +        L  L++N YP+ +F+GDT +   G  +  + IL      LLI
Sbjct:   95 LIGFIDDFIKVVKKRKDGLYWNQKMFGLLLVAVTFAV-YLSHTHTSDIIIP-----FMGMDKTVSLGWLFVPFVVLVLIASTNAVNITDGLDGLAAGVTLIVTV------FFTIVAMTRSEWEYIKMFSAMVA----GGCLGFLTFNAYPARIFMGDTGSLALGGAVGAIAILMKMPLILLI 260

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy Swiss-Prot
Match: TAGO_BACSU (Probable undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase OS=Bacillus subtilis (strain 168) GN=tagO PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 5.098e-7
Identity = 41/129 (31.78%), Postives = 70/129 (54.26%), Query Frame = 2

Query:  764 EVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHY-SETLLIFFLPQVL 1147
            E  +LGW+      L  V  TN+IN+  GL+GL  G +V+  S I +  L            +    S+ LV  ++A++L  L YN++P+ +F+GDT + F G +++++ +LG Y S TL    +P ++
Sbjct:  132 ERFELGWMAYPLTVLWIVGITNAINLIDGLDGLAAGLSVIGLSTIAVMAL---------SGGKVLILSLSLV--VIASTLGFLFYNFHPAKIFMGDTGSLFLGYSISILSLLGLYKSVTLFSIVIPIII 249

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: A0A0D2RVP6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G134300 PE=4 SV=1)

HSP 1 Score: 654.44 bits (1687), Expect = 0.000e+0
Identity = 383/417 (91.85%), Postives = 387/417 (92.81%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 1477
            IAPPKKALIFKFCLFFSIPYFYLLYQ+YTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESLGIVVGIVFLVLAILFQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKLLLPSIAALPLLMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCP                 +H+            + RFNPETGLLTGTRDGTLINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK
Sbjct:   31 IAPPKKALIFKFCLFFSIPYFYLLYQYYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESLGIVVGIVFLVLAILFQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKLLLPSIAALPLLMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCP-----------------RHR------------LPRFNPETGLLTGTRDGTLINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 418

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: A0A061EVJ5_THECC (UDP-glcnac-adolichol phosphate glcnac-1-p-transferase OS=Theobroma cacao GN=TCM_024496 PE=4 SV=1)

HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0
Identity = 358/417 (85.85%), Postives = 374/417 (89.69%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 1477
            I+PPKK LIFK CLFFSI YFYLL+Q Y IEQ+L+RSILINA+L V GFFLTQRMIPVASRYVLKR LFGFDINKKGTPQGTVKVPESLGIVVGIVFLVLAILFQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKLLLPSIAALPLLMAYAGHTTIIIPKPL+S+VG EVLDLG VYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHN+MQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCP                 +H+            + RFNPETGLLTGT DGTL+NFYLR+VGPKSEK+LC+HLL VQALGCCFCF+LRY LAGWYK
Sbjct:   35 ISPPKKGLIFKLCLFFSISYFYLLFQRYKIEQDLKRSILINAALSVAGFFLTQRMIPVASRYVLKRNLFGFDINKKGTPQGTVKVPESLGIVVGIVFLVLAILFQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKLLLPSIAALPLLMAYAGHTTIIIPKPLVSFVGLEVLDLGCVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNIMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCP-----------------RHR------------LPRFNPETGLLTGTHDGTLVNFYLRIVGPKSEKSLCLHLLFVQALGCCFCFMLRYFLAGWYK 422

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: V4RJZ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005020mg PE=4 SV=1)

HSP 1 Score: 582.793 bits (1501), Expect = 0.000e+0
Identity = 327/417 (78.42%), Postives = 357/417 (85.61%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 1477
            IAPPK  LIFK CLFF+IPYFYLL+ HY IE EL+RSILINA L + GFF+TQ+MIPVASRYVL+R LFG+DINKKGTPQGTVKVPESLGIVVG VFLVLAILFQYFNFTADSNWLVEYNAALASICFM+LLGFVDDVLDVPWRVKL+LPS AALPLLMAYAGHT+IIIPKPL+ YVG E+LDLGW+YKLYM LLAVFCTNSINIHAGLNGLEVGQTVVIASAIL+HN+MQIGAS DPEYKQAHAFSIYLVQPLLATSLAL SYNWYPSSVFVGDTYTYFAGMTMAVVGILGH+SETLLIFFLPQVLNFLLS+PQL G+VKCP                 +H+            + RFNP+TGLLTGT DGTL+NF+LR+ G  SE +LC  LL+ QA+ CC CF+LRY L GWYK
Sbjct:   40 IAPPKSGLIFKLCLFFAIPYFYLLFYHYKIESELQRSILINAGLSLAGFFITQKMIPVASRYVLRRNLFGYDINKKGTPQGTVKVPESLGIVVGAVFLVLAILFQYFNFTADSNWLVEYNAALASICFMLLLGFVDDVLDVPWRVKLILPSFAALPLLMAYAGHTSIIIPKPLVPYVGLEILDLGWIYKLYMFLLAVFCTNSINIHAGLNGLEVGQTVVIASAILLHNIMQIGASLDPEYKQAHAFSIYLVQPLLATSLALFSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHFSETLLIFFLPQVLNFLLSVPQLFGFVKCP-----------------RHR------------LPRFNPQTGLLTGTNDGTLVNFFLRLFGKMSEGSLCAALLVFQAIACCLCFVLRYFLTGWYK 427

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: A0A067DTH7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014480mg PE=4 SV=1)

HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0
Identity = 325/417 (77.94%), Postives = 356/417 (85.37%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 1477
            IAPPK  LIFK CLFF+IPYFYLL+ HY IE EL+RSILINA L + GFF+TQ+MIPVASRYVL+R LFG+DINKKGTPQGT+KVPESLGIVVG VFLVLAILFQYFNFTADSNWLVEYNAALASICFM+LLGFVDDVLDVPWRVKL+LPS AALPLLMAYAGHT+IIIPKPL+ YVG E+LDLGW+YKLYM LLAVFCTNSINIHAGLNGLEVGQTVVIASAIL+HN+MQIGAS DPEYKQAHAFSIYLVQPLLATSLAL SYNWYPSSVFVGDTYTYFAGMTMAVVGILGH+SETLLIFFLPQVLNFLLS+PQL G+VKCP                 +H+            +  FNP+TGLLTGT DGTL+NF+LR+ G  SE +LC  LL+ QA+ CC CF+LRY L GWYK
Sbjct:   36 IAPPKSGLIFKLCLFFAIPYFYLLFYHYKIESELQRSILINAGLSLAGFFITQKMIPVASRYVLRRNLFGYDINKKGTPQGTIKVPESLGIVVGAVFLVLAILFQYFNFTADSNWLVEYNAALASICFMLLLGFVDDVLDVPWRVKLILPSFAALPLLMAYAGHTSIIIPKPLVPYVGLEILDLGWIYKLYMFLLAVFCTNSINIHAGLNGLEVGQTVVIASAILLHNIMQIGASLDPEYKQAHAFSIYLVQPLLATSLALFSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHFSETLLIFFLPQVLNFLLSVPQLFGFVKCP-----------------RHR------------LPGFNPQTGLLTGTNDGTLVNFFLRLFGKMSEGSLCAALLVFQAIACCLCFVLRYFLTGWYK 423

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: A0A0D2Q9D5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G134300 PE=4 SV=1)

HSP 1 Score: 575.089 bits (1481), Expect = 0.000e+0
Identity = 353/417 (84.65%), Postives = 357/417 (85.61%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 1477
            IAPPKKALIFKFCLFFSIPYFYLLYQ+YTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESLGIVVGIVFLVLAILFQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKLLLPSIAALPLLMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYN                              ETLLIFFLPQVLNFLLSLPQLSGYVKCP                 +H+            + RFNPETGLLTGTRDGTLINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK
Sbjct:   31 IAPPKKALIFKFCLFFSIPYFYLLYQYYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESLGIVVGIVFLVLAILFQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKLLLPSIAALPLLMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYN-----------------------------CETLLIFFLPQVLNFLLSLPQLSGYVKCP-----------------RHR------------LPRFNPETGLLTGTRDGTLINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 389

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: M5XC16_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006193mg PE=4 SV=1)

HSP 1 Score: 569.696 bits (1467), Expect = 0.000e+0
Identity = 322/417 (77.22%), Postives = 355/417 (85.13%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 1477
            IAPPK  +I K  LFFS+PYFYL++ HY IE ELR+SILINA+L + GFF+T +MIPVASRYVLKR LFG+DINKKGTPQGTVKVPESLGIVVGIVFLVL ILFQYFNFTADSNWLVEYNAALASICFM+LLGFVDDVLD+PWRVKLLLPS AALPLLMAYAGHTTIIIPKPLI YVG EVLDLGW+YKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHN+MQIGAS+D EYK AHAFS+YLVQPLLATSLAL SYNWYPSS FVGDTYTYFAGMTMAV GILGH+SETLLIFF+PQVLNFLLSLPQL+G V CP                 +H+            + +F+P TGLLTGT DGTL+NF+LR  G  +EK+LCI+LL+ QA+ CCFCF+LR+ LAGWYK
Sbjct:   36 IAPPKLGVILKLTLFFSVPYFYLIFYHYKIEHELRKSILINAALSLAGFFVTVKMIPVASRYVLKRNLFGYDINKKGTPQGTVKVPESLGIVVGIVFLVLGILFQYFNFTADSNWLVEYNAALASICFMVLLGFVDDVLDIPWRVKLLLPSFAALPLLMAYAGHTTIIIPKPLIPYVGLEVLDLGWMYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNIMQIGASADSEYKMAHAFSLYLVQPLLATSLALFSYNWYPSSAFVGDTYTYFAGMTMAVAGILGHFSETLLIFFVPQVLNFLLSLPQLAGIVPCP-----------------RHR------------LPKFDPGTGLLTGTNDGTLVNFFLRRFGRMTEKSLCIYLLVFQAIACCFCFVLRFFLAGWYK 423

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: A0A067DUP5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014480mg PE=4 SV=1)

HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0
Identity = 321/412 (77.91%), Postives = 352/412 (85.44%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLL 1462
            IAPPK  LIFK CLFF+IPYFYLL+ HY IE EL+RSILINA L + GFF+TQ+MIPVASRYVL+R LFG+DINKKGTPQGT+KVPESLGIVVG VFLVLAILFQYFNFTADSNWLVEYNAALASICFM+LLGFVDDVLDVPWRVKL+LPS AALPLLMAYAGHT+IIIPKPL+ YVG E+LDLGW+YKLYM LLAVFCTNSINIHAGLNGLEVGQTVVIASAIL+HN+MQIGAS DPEYKQAHAFSIYLVQPLLATSLAL SYNWYPSSVFVGDTYTYFAGMTMAVVGILGH+SETLLIFFLPQVLNFLLS+PQL G+VKCP                 +H+            +  FNP+TGLLTGT DGTL+NF+LR+ G  SE +LC  LL+ QA+ CC CF+LR LL
Sbjct:   36 IAPPKSGLIFKLCLFFAIPYFYLLFYHYKIESELQRSILINAGLSLAGFFITQKMIPVASRYVLRRNLFGYDINKKGTPQGTIKVPESLGIVVGAVFLVLAILFQYFNFTADSNWLVEYNAALASICFMLLLGFVDDVLDVPWRVKLILPSFAALPLLMAYAGHTSIIIPKPLVPYVGLEILDLGWIYKLYMFLLAVFCTNSINIHAGLNGLEVGQTVVIASAILLHNIMQIGASLDPEYKQAHAFSIYLVQPLLATSLALFSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHFSETLLIFFLPQVLNFLLSVPQLFGFVKCP-----------------RHR------------LPGFNPQTGLLTGTNDGTLVNFFLRLFGKMSEGSLCAALLVFQAIACCLCFVLRELL 418

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: W9RIT7_9ROSA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Morus notabilis GN=L484_015500 PE=4 SV=1)

HSP 1 Score: 567 bits (1460), Expect = 0.000e+0
Identity = 317/417 (76.02%), Postives = 353/417 (84.65%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 1477
            IAPPK  +I K   FF +PYFYL++ HY I+ EL++SILINA L + GFF+T ++IPVASRYVL+R LFG+DINKKGTPQGTVKVPESLGI +GIVF+VLAILFQYFNFTADSNWLVEYNAALASICFM+LLGFVDDVLDVPWRVKL+LPS AALPLLMAYAGHTTIIIPKPLI YVG E+LDLGW+YKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVI+SAI+IHN+MQIGAS+DPEYKQAHAFSIYLVQPLLATSL LLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGH+SETLLIFF PQVLNFLLSLPQL+G V CP                 +H+            + RF+P+T LLTGT DGTL+NF+LR  G  SEK+LCI+LL+ QA+ C FCFLL Y LAGWYK
Sbjct:   34 IAPPKSGVILKLSFFFLVPYFYLIFYHYKIDSELKKSILINAGLSLAGFFVTVKLIPVASRYVLRRNLFGYDINKKGTPQGTVKVPESLGIAIGIVFMVLAILFQYFNFTADSNWLVEYNAALASICFMLLLGFVDDVLDVPWRVKLILPSFAALPLLMAYAGHTTIIIPKPLIPYVGLELLDLGWIYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVISSAIVIHNIMQIGASTDPEYKQAHAFSIYLVQPLLATSLGLLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHFSETLLIFFAPQVLNFLLSLPQLAGIVPCP-----------------RHR------------LPRFDPQTKLLTGTNDGTLVNFFLRQFGRMSEKSLCIYLLVFQAIACFFCFLLGYFLAGWYK 421

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: I3SCK4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 319/417 (76.50%), Postives = 355/417 (85.13%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 1477
            IAPPK  L+ K  +F SIPYFYL++ HY+I+ +LRRSILINA + + GFF+T RMIPVASRYVLKR LFG+DINKKGT QG VKVPESLGIVVGIVFLV+ ILFQYFNFTADSNWLVEYNAALA +CFM LLGFVDDVLDVPWRVKLLLPSIAALPLLMAYAGHTTI+IPKPL+ ++G E+LDLGW+YKLYMGLLAVFCTNSINIHAGLNGLEV QTVVI+SAIL+HN+MQIGAS DPEYKQAHAFSIYLVQPLLATSLAL S+NWYPSSVFVGDTYTYFAGMTMAV GILGH+SETLLIFFLPQVLNFLLSLPQLSGY+ CP                 +H+            + RF+P+TGLLTGT DGTL+NF+LR +G KSEK LC++LL+ QAL CCFCF LRYLLAGWYK
Sbjct:   31 IAPPKWGLLLKLSIF-SIPYFYLIFYHYSIDPQLRRSILINAGMSLAGFFVTVRMIPVASRYVLKRNLFGYDINKKGTSQGNVKVPESLGIVVGIVFLVVGILFQYFNFTADSNWLVEYNAALACVCFMTLLGFVDDVLDVPWRVKLLLPSIAALPLLMAYAGHTTIVIPKPLVQHIGIEILDLGWIYKLYMGLLAVFCTNSINIHAGLNGLEVRQTVVISSAILMHNIMQIGASKDPEYKQAHAFSIYLVQPLLATSLALFSFNWYPSSVFVGDTYTYFAGMTMAVAGILGHFSETLLIFFLPQVLNFLLSLPQLSGYIPCP-----------------RHR------------LPRFDPQTGLLTGTNDGTLVNFFLRTLGRKSEKALCVYLLVFQALACCFCFFLRYLLAGWYK 417

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Match: A0A067JQI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22447 PE=4 SV=1)

HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0
Identity = 324/417 (77.70%), Postives = 351/417 (84.17%), Query Frame = 2

Query:  227 IAPPKKALIFKFCLFFSIPYFYLLYQHYTIEQELRRSILINASLCVTGFFLTQRMIPVASRYVLKRGLFGFDINKKGTPQGTVKVPESXXXXXXXXXXXXXXXXQYFNFTADSNWLVEYNAALASICFMILLGFVDDVLDVPWRVKXXXXXXXXXXXXMAYAGHTTIIIPKPLISYVGQEVLDLGWVYKLYMGLLAVFCTNSINIHAGLNGLEVGQTVVIASAILIHNLMQIGASSDPEYKQAHAFSIYLVQPLLATSLALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHYSETLLIFFLPQVLNFLLSLPQLSGYVKCXXXXXXXXXXXXVSDLDCKHQTFLISFIINGFCISRFNPEXXXXXXXXXXXXINFYLRMVGPKSEKTLCIHLLLVQALGCCFCFLLRYLLAGWYK 1477
            IA PK   IFK  +     YFYLL+ HY I   L+RSILINA+L + GFFLT ++IPVASRYVL+R LFGFDINKKGTP G VKVPESLGIVVGIVFLVLAI+FQYFNFTADSNWLVEYNAALASICFM LLGFVDDVLDVPWRVKLLLP+IAALPLLMAYAGHTTIIIPKPLI YVG EVLDLGW+YKLYMGLLAVFCTNSINIHAG+NGLEVGQTVVIASAILIHN+MQIGAS DPEY+QAHAFS+YLVQPLLATS+ALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGH+SETLLIFFLPQV+NFLLSLPQL G+V CP                 +H+            + RF+P+TGLLTGT DGTL+N YLR+ G KSE  LC HLLLVQ +GCCFCFLLRYLLAGWYK
Sbjct:   37 IASPKSGFIFKVSILPLALYFYLLFYHYEIHPALQRSILINAALSLAGFFLTVKLIPVASRYVLRRNLFGFDINKKGTPHGNVKVPESLGIVVGIVFLVLAIVFQYFNFTADSNWLVEYNAALASICFMTLLGFVDDVLDVPWRVKLLLPTIAALPLLMAYAGHTTIIIPKPLIPYVGLEVLDLGWIYKLYMGLLAVFCTNSINIHAGINGLEVGQTVVIASAILIHNIMQIGASVDPEYQQAHAFSLYLVQPLLATSMALLSYNWYPSSVFVGDTYTYFAGMTMAVVGILGHFSETLLIFFLPQVINFLLSLPQLFGFVHCP-----------------RHR------------LPRFDPQTGLLTGTNDGTLVNVYLRIFGRKSESLLCAHLLLVQGIGCCFCFLLRYLLAGWYK 424

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 13


Match Name	E-value	Identity	Description
GPT_SULAC	4.511e-8	30.94	Putative UDP-N-acetylglucosamine--dolichyl-phospha...	[more]
MRAY_CLOTH	3.985e-7	28.02	Phospho-N-acetylmuramoyl-pentapeptide-transferase ...	[more]
TAGO_BACSU	5.098e-7	31.78	Probable undecaprenyl-phosphate N-acetylglucosamin...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0097666 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2RVP6_GOSRA	0.000e+0	91.85	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061EVJ5_THECC	0.000e+0	85.85	UDP-glcnac-adolichol phosphate glcnac-1-p-transfer...	[more]
V4RJZ0_9ROSI	0.000e+0	78.42	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
A0A067DTH7_CITSI	0.000e+0	77.94	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A0D2Q9D5_GOSRA	0.000e+0	84.65	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
M5XC16_PRUPE	0.000e+0	77.22	Uncharacterized protein OS=Prunus persica GN=PRUPE...	[more]
A0A067DUP5_CITSI	0.000e+0	77.91	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
W9RIT7_9ROSA	0.000e+0	76.02	UDP-N-acetylglucosamine--dolichyl-phosphate N-acet...	[more]
I3SCK4_LOTJA	0.000e+0	76.50	Uncharacterized protein OS=Lotus japonicus PE=2 SV...	[more]
A0A067JQI3_JATCU	0.000e+0	77.70	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000715	Glycosyl transferase, family 4	PFAM	PF00953	Glycos_transf_4	coord: 160..330 e-value: 8.2E-38 score: 129.7
None	No IPR available	PANTHER	PTHR10571:SF0	UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE	coord: 46..367
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 228..247
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 306..316
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 208..227
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 95..126
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 248..252
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..45
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 75..94
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 342..367
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 284..305
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 174..184
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 148..153
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 317..341
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 273..283
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 127..147
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 154..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 253..272
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 185..207
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..63
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 64..74
None	No IPR available	SIGNALP_GRAM_POSITIVE	SignalP-TM	SignalP-TM	coord: 1..17 score: 0.456
None	No IPR available	TMHMM	TMhelix		coord: 155..173
None	No IPR available	TMHMM	TMhelix		coord: 123..145
None	No IPR available	TMHMM	TMhelix		coord: 246..268
None	No IPR available	TMHMM	TMhelix		coord: 283..302
None	No IPR available	TMHMM	TMhelix		coord: 185..207
None	No IPR available	TMHMM	TMhelix		coord: 222..241
None	No IPR available	TMHMM	TMhelix		coord: 309..331
None	No IPR available	TMHMM	TMhelix		coord: 336..358
IPR033895	UDP-GlcNAc-dolichyl-phosphate GlcNAc phosphotransferase	PANTHER	PTHR10571	UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE	coord: 46..367

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0097666 ID=g.barbadense_cottongen_reftransV1_0097666; Name=g.barbadense_cottongen_reftransV1_0097666; organism=Gossypium barbadense; type=contig; length=1912bp
TCTTCTCATCAAAATAACATAAAATAAAATCCCCTCAAAACGACTCCATT
TAATTTCCCTAACTTTCCATGTACTAGATCCAGTGAAAATTTTAAACAAA
CTAAAACAAAATTTGCAGAGAAACACAGCAGCAGCCATGGCAGCTCGCAA
GAGAGCTTCAGCGGCAGATACAAAGCCAAGCCCTCCTCCTCAAACCCAGG
AAACAACCACCCAAATTGACCCGCCTATCGCTCCACCTAAGAAAGCCTTA
ATCTTCAAATTCTGTCTTTTCTTTTCAATCCCATACTTTTACCTTCTTTA
CCAACACTACACGATCGAGCAAGAACTCAGGAGATCCATCCTTATCAATG
CTTCCCTTTGTGTTACCGGCTTCTTCCTTACTCAGAGAATGATCCCTGTT
GCTTCTAGATATGTTTTGAAACGCGGTTTATTTGGATTTGATATTAACAA
GAAGGGTACCCCTCAAGGCACTGTTAAAGTGCCCGAATCATTGGGAATTG
TTGTAGGCATTGTTTTCTTGGTATTGGCTATTCTATTCCAGTATTTTAAC
TTCACAGCTGATTCAAATTGGCTCGTTGAGTATAATGCAGCCTTAGCATC
CATCTGCTTCATGATTTTACTTGGATTTGTAGATGATGTCCTGGATGTCC
CTTGGAGAGTGAAACTACTACTACCGTCAATTGCTGCACTTCCATTGTTG
ATGGCCTATGCTGGACATACAACTATCATAATTCCAAAGCCTCTTATTTC
ATATGTTGGGCAAGAGGTGTTGGATCTAGGATGGGTGTACAAATTGTATA
TGGGGCTTTTGGCAGTATTCTGCACAAATTCAATTAACATTCATGCTGGT
TTGAATGGCCTTGAAGTTGGGCAAACAGTTGTGATTGCATCAGCTATTTT
GATACATAATTTAATGCAAATTGGAGCATCTTCAGATCCTGAGTATAAAC
AAGCTCATGCTTTCTCTATTTATCTTGTGCAACCCTTACTAGCCACTTCC
TTGGCCTTACTTTCCTACAACTGGTATCCTTCTTCAGTTTTTGTTGGGGA
TACATACACATACTTTGCTGGAATGACCATGGCTGTAGTTGGAATTCTGG
GACACTATAGTGAAACACTGTTGATTTTCTTTCTTCCTCAAGTGTTGAAC
TTTCTCTTGTCACTTCCTCAGCTTTCTGGCTATGTCAAATGTCCCCGACA
TCGTCTTCCAAGGTAACTCTTGATACCAGTATCAGACTTGGACTGCAAGC
ATCAAACTTTTCTCATCTCTTTTATCATTAATGGCTTTTGTATCTCTAGA
TTCAATCCTGAAACTGGATTACTTACTGGAACACGTGATGGTACACTCAT
AAACTTTTACTTGAGAATGGTTGGGCCGAAATCAGAAAAGACGCTTTGTA
TCCACCTCCTCCTTGTTCAGGCCCTAGGATGTTGCTTCTGTTTCTTGCTG
AGATACTTGCTGGCTGGTTGGTACAAATAAGGTGGCAGCTTTAAAGAAAT
GCAAAATACATTTGCTATACGGGTTTGTGGTGTAGAACAGGAGAAATGGT
TTTTTCAGCTGAGAGAAATGAGCCTACTATCTTGACATACCATTTTCATT
TGACAATTTATATATTTGGTGGAAGACAAAGTTTGAGAATATTAGATATG
GGGAAACCAAAGCCTCAAATACTGTATTTTTGTTTGCGTTAGAAGGTCCG
TGTTTAAAACTGTACATTGAGTCATTGATTCACATAAATTTTAACTACTT
TTTTATATATTGGGGAATTCAGAAGAGGATAGAGGGCTGCAATTTGCAAT
TTTTTTAGTGCCCATTATGTGTTTTATTGACGTCTTGTTAAAAAATTTCA
CTTTGTGTATCAATTATTATTTCGACAATTACAGAACTTTAAAAAAAAAA
AAATTATTAACG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR000715	Glycosyl_transferase_4
IPR033895	GPT

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral to membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity
GO:0003975	UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006487	protein N-linked glycosylation
GO:0006488	dolichol-linked oligosaccharide biosynthetic process

Search form

g.barbadense_cottongen_reftransV1_0097666, g.barbadense_cottongen_reftransV1_0097666 (contig) Gossypium barbadense

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