g.barbadense_cottongen_reftransV1_0097648, g.barbadense_cottongen_reftransV1_0097648 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy Swiss-Prot
Match: MAPT_ARATH (Microtubule-associated protein TORTIFOLIA1 OS=Arabidopsis thaliana GN=TOR1 PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 2.085e-27 Identity = 105/304 (34.54%), Postives = 166/304 (54.61%), Query Frame = -1 Query: 1843 TMSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKP------------PFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPG 2718 T S N + Q + +LKQ++ T ++KLADRDT +A +LE ++LT +++ FLNCL+++ S K V+++C+ LL+ + H + + HL+K+I+ + +RL+D DS VR AC + A+S K + KPL E + EQ+ Q GA+MC++ +E+A P +K+ P++ KL+ + SF AK A + S S GA + L+ + + L S DW TRKAAA+ L +A L E + +T L RFDK+K VRE++ +L LWK + G Sbjct: 24 TRSCSNSGSLTSFQAMVELKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVKKECLHLLSYVCSLHCDSTAAHLTKIIAQIVKRLKDSDSGVRDACRDTIGALSGIYLKGKEEGTNTGSASLAVGLFVKPLFEAM-GEQNKVVQSGASMCMARMVESAASPPVTSFQKLCPRICKLLSNSSFLAK-ASLLPVVSSLSQVGAIAPQSLESLLESIHDCLGSTDWVTRKAAAETLTALASHSSGLIKEKTDSTITVLETCRFDKIKPVRESVTEALQLWKKISG 325 HSP 2 Score: 67.3958 bits (163), Expect = 4.999e-10 Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = -1 Query: 952 IREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKF-WRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAG 1347 I+ QL Q+E QQ+NL+N+LQ+FIG S + +LE RV GLE +++++ DL+ISSGR N+ + K A + + K+ R R S + GRM ++ D + + P ++ QAG Sbjct: 510 IQRQLLQLERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLERIVEDMARDLSISSGRRANLTAGFGKYNSF--ANYPTGKYNGRAPGERGSQTDGAMRGRM---------WNSDMADDWFIPPHAASRNGQAG 631
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy Swiss-Prot
Match: SP2L_ARATH (Microtubule-associated protein SPIRAL2-like OS=Arabidopsis thaliana GN=SP2L PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.679e-26 Identity = 96/292 (32.88%), Postives = 165/292 (56.51%), Query Frame = -1 Query: 1834 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNL--TVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPP------------FSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCE 2667 +LKQR+ T L++L DRDT +A +LE I ++ + + + L+CL ++ S K+PV+R+ + LL+ + S+ ++ L+K+IS + +RL+D D+ VR AC +A ++S+ K + +KPL E + EQ+ + Q GAA+C+ I++A +P +K+ P++ KL+ S ++ K A + S GA + L+ + E L +W TRKAAAD L +A+ L A+ + +TAL RFDK+K VRE+++ +L++WK++ G E Sbjct: 36 ELKQRILTSLSRLGDRDTYQIAVDDLEKIVVSVPDSPEILPVLLHCLFDSSSDLKAPVKRESIRLLSFLCLSYTDLSFSQLAKIISHIVKRLKDADNGVRDACRDAIGSLSAQFLKEKEVENGNYVGSSLVGLFAKPLFEAM-AEQNKSLQSGAAICMGKMIDSATEPPVAAFQKLCPRISKLLNSPNYITK-ASLLPVVGSLSQVGAIAPQSLESLLHSIHECLGCTNWVTRKAAADVLISLAVHSSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNIAGKGE 325 HSP 2 Score: 57.3806 bits (137), Expect = 5.366e-7 Identity = 25/56 (44.64%), Postives = 41/56 (73.21%), Query Frame = -1 Query: 1180 IREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSG 1347 ++ QL +E QQ++++N+LQ F+G S G+ SLE RV GLE ++E+S +++I SG Sbjct: 503 LQRQLLHLERQQTHIMNMLQDFMGGSHDGMISLENRVRGLERIVEEMSREMSIQSG 558
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: B9HU87_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s04830g PE=4 SV=1) HSP 1 Score: 511.531 bits (1316), Expect = 6.210e-166 Identity = 357/627 (56.94%), Postives = 432/627 (68.90%), Query Frame = -1 Query: 868 HDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNL-TVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNT---RRLDRSKSSDWKIETVQPKS-------------LFSEASGD----YNIKRSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEEN-----LDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFSKNTIQN 2670 +DLK RV CLNKL+DRDT+++A+ ELESIA+NL T DS S FLNC+HNTDSS+KSPVR+QCV LLTL+S+SHGN LSPHLSKMIST+ RRLRDPDSAVRSACVEAT AMSS IT PPFS LSKPLI++L ++QD+N+QIGAA+CL+A IEAAP+PE EQL+KVLP+LGKLV+ E FKAKAA+ VI S+ VGGA SKG+LDW V C VE L SEDW RKAAA+ALGKVA EK+LA E+KA C+T+L +RFDKVK+VRETMNR+L+LWK+VPG+ +E S S S N C +S SK DVGFRTP SKK VP R PPSDAS + AKK++ KSN+ NS T +L + S WKIE P+ L S +GD R V FG D+K KFGGL+S S+V+PF ++EN ++V+ Y EN KD EDL LIREQL QIE+QQS+LL+LLQ +IG SQ GINSLETRV+GLEMA++EISYDLA+SSGRI + +N CC LPGAEFLS KFWR TE R+ V N+ K++ E P R YQ Q GF +N S N GF + + N Sbjct: 11 NDLKHRVIICLNKLSDRDTVSVATTELESIAKNLSTPDSFSHFLNCIHNTDSSSKSPVRKQCVSLLTLLSRSHGNSLSPHLSKMISTITRRLRDPDSAVRSACVEATFAMSSQITDPPFSTLSKPLIDLLTIDQDLNAQIGAALCLAAVIEAAPEPEVEQLRKVLPRLGKLVKGEGFKAKAALLSVIRSIVGVGGASSKGILDWLVPCLVEFLCSEDWAARKAAAEALGKVASIEKKLAKEHKATCLTSLETRRFDKVKVVRETMNRTLELWKEVPGISQE----SSVPSQSTYNVVGICISSASKNSKDVGFRTPLSKKTVPAIRFPPSDASPVTAAKKQSPAKSNDHNSKTGMLHKLGHDRHSAWKIEIATPEGKVSGDDTRNDSEVLGSGQNGDGTSSMRETRRVLFGSIRDDKWNKFGGLKSGSRVVPFQEDENCYNKVVEVSSSAEDFY--ENHKDYEDLSLIREQLIQIENQQSSLLDLLQGYIGRSQVGINSLETRVHGLEMAVNEISYDLAVSSGRIPKTNYAENTCCNLPGAEFLSSKFWR-TECRY----------------VSNVPVKNARIETCNPGSQR-YQHQNRGGFAVNTSAGYSSINGRNSGFYTSQMAN 613
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A0A0KE01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401530 PE=4 SV=1) HSP 1 Score: 508.834 bits (1309), Expect = 1.898e-164 Identity = 329/654 (50.31%), Postives = 435/654 (66.51%), Query Frame = -1 Query: 829 PQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTRRLDRSKSSDWKIETV---QPKSLFSE-----ASGDYNI-----------KRSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENL--------DVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS-----KNTIQNAERFQVGNASASD 2694 PQ HDLKQRV CLNKL DRDTLA+A+ ELESIA+ LT DS S FL+C+HNTD+S+KSPVR+QCV L+ L+SQSHG+ LSP LSKMIST+ RRLRD DS +RSACV+AT MSS ITKPPFSV KPL+E L +EQD+NSQIG+A+CL+AA+EAAPDP+ QL+K L KLGKL ++E FKAKAA+ +IGS+ +VGGA S+ V+DW V C VE LS++DW RKAAA+ LG+VA+AE++LAA+YKA+C+ +L ++RFDK+K+VRETMN++L+LWK++P + S DNG+ GCF S + RTP K V + SP + ++ K NS++ +L+R KSS+W +E P S F+ G NI + V + DEKV K LRS S+V+PF + +N+ DVT +++ + K+ ED+ LIR+QL QIE+QQS+LLNLLQ FIGSSQSG+NSLE RV+GLEMALDEISYDL +SSGR+ N +N CCKLPGAEFLS KFWR+ E R+S+S+ S+ ++ S N H+ D+DS E K ++ ++ + G VMNP+ D + R+N G K IQ + + NAS +D Sbjct: 13 PQPAVAANHDLKQRVIACLNKLEDRDTLAMAANELESIAKALTYDSFSSFLSCIHNTDASSKSPVRKQCVYLIGLLSQSHGDALSPFLSKMISTVVRRLRDSDSTIRSACVDATALMSSQITKPPFSVFLKPLMETLTLEQDLNSQIGSALCLAAAVEAAPDPDVSQLRKNLTKLGKLAKNEGFKAKAALLVLIGSIIAVGGATSRSVMDWLVPCIVEFLSNDDWAVRKAAAETLGRVAVAERDLAADYKASCIISLDSRRFDKIKVVRETMNQTLELWKEIPDASGD---------ISTDNGNGGCFPPPSTCSPEQNLRTPLKKTVPTSRSSPLDVSRVTNSKKISPKNIGKNSSTPISKLERQKSSNWSVEIAVSNSPSSKFASENNAPGGGSENIDFQENENSRLNAKRVLYNNVRDEKVNKSSNLRSGSRVVPFEEHDNIQEDESRDSDVTVGSSSEETFGSHKEFEDISLIRDQLRQIENQQSSLLNLLQNFIGSSQSGMNSLEKRVHGLEMALDEISYDLGLSSGRVPNSSFAENSCCKLPGAEFLSSKFWRRAEGRYSSSKFCSTTQVSSPNDPHHTLDRDSVTEPLK-QNNQIFRTERRGGLVMNPLADIDGEFRENMGLYPKRLLKTMIQENDNVHIYNASGTD 656
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: B9S2H6_RICCO (Microtubule-associated protein TORTIFOLIA1, putative OS=Ricinus communis GN=RCOM_0699600 PE=4 SV=1) HSP 1 Score: 507.679 bits (1306), Expect = 4.713e-164 Identity = 360/638 (56.43%), Postives = 441/638 (69.12%), Query Frame = -1 Query: 853 HDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNL-TVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNT---RRLDRSKSSDWKIETVQPKSLFS-------------EASGDYN-------IKRSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENL---DVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGF-----SKNTIQNAERFQ 2670 +DLK RV +CLNKL+DRDTL LA+ ELE+IA+ L T D+ S FL C++NTDSS +SPVR+ CV LLTL+S SHGN L+PH SKMISTL RRL DPDSAVR+ACVEATTAMSS ITKPPFS LSKPLIE++ VE+D N QIG+A+CL+AAIEAAP PE E L+K+LP+LGKLVR + FKAKAA+ VIGS+ SVGGA SKGVLDW + C VE LS +DW +RKAAA+ LGK+A+AEKELA E+KA C++ L N+RFDKVK VRETMNR+L+LWK VPGV +EVS SQS SSIDN F S N+VGF P KK V +RSP SD+S +TA+K++ K N NS T R+ + ++S WKIE P+ E+ D N KR V F +K+ K GG RS S+V+P +D+++ DV N EN KDIEDL LI +QL QIE+QQS+LL+LLQKFIGSSQ GINSLETRVNGLEMALDEISYDLA+S+GR+ NMDS DN CCKLPG L KFWR+TE + STSR G + SL+A N+ D+D+ + A S Q Q SG V++P +R N G+ S N IQ+ + Q Sbjct: 20 NDLKNRVISCLNKLSDRDTLLLATTELETIAKTLATHDAFSSFLTCIYNTDSSCRSPVRKHCVNLLTLLSNSHGNSLAPHFSKMISTLTRRLHDPDSAVRAACVEATTAMSSQITKPPFSTLSKPLIEIMTVEKDFNCQIGSALCLAAAIEAAPQPELEMLRKMLPRLGKLVRGDGFKAKAALLSVIGSIVSVGGAKSKGVLDWLMPCLVEFLSCDDWSSRKAAAEVLGKLAVAEKELAKEHKAVCLSCLENRRFDKVKAVRETMNRTLELWKQVPGVSDEVSVPSQSKFSSIDNAISESFPSAPHNSNEVGFNHPVPKKTVLANRSPLSDSSVVTTARKQSPAKCINDNSKTSMFRKSEHKETSAWKIEIALPQDTGGCEEDIKRQDFGGFESGEDVNNGKCRPETKR-VLFNSIRKDKLHKSGGFRSGSRVVPCNDDDDCYSKDVEVNNPTEESIENSKDIEDLSLIHDQLIQIENQQSHLLDLLQKFIGSSQHGINSLETRVNGLEMALDEISYDLALSTGRLPNMDSADNTCCKLPGT--LCSKFWRRTEGQSSTSRFSFPGSIGSLHAAQNIRDRDARTASFN-ANSERSQSQIRSGLVISP-------LRRNSGYYSSQLSSNIIQDDGQVQ 646
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: F6HPI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01020 PE=4 SV=1) HSP 1 Score: 506.138 bits (1302), Expect = 1.227e-163 Identity = 341/658 (51.82%), Postives = 443/658 (67.33%), Query Frame = -1 Query: 778 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNT---RRLDRSKSSDWKIETVQPKSLFSEASGDYNIKR----------------------SVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLD--VTDKNAA-LYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSRF 2667 DLK RV TCLNKL+DRDTLA+ +AELESIARNLT DS SPFL+CL+ TDSS KSPVR+QCV LL ++S++HG+ LSPHLSKM+S + RRLRD DSAVR ACV+A MSS ITKPPFS KPL + +++EQD N QIG+A+C++AAIEAAPDPE EQL K+LP+L KL +SESF+AK A+ +IGS+ GGA ++GVL+ V C VE LSSEDW RKA+A+AL ++A+ E++LA E+K++ +++L ++RFDKVK+VR+TMNR+LDLWK++P + S S +SS DNG+ GCF SK DVGF TPQ KK++PT P ++ + K+ SNN S T R+LD K SDWK+E P S+ + + ++KR V F K +EK+ KFG LRS S+++PFH+ N + V D NA + EN KDIEDL LIR+QL QIE+QQS++LNLLQ+FIG+SQSGINSLETRVNGLEM L+EIS+DLAISSGR+ N DS N CCKLPGAEFLS KFW++TE +TSR S+G + +L ++N+ +K + + + + Q Q GFV NP+ D G S+ I DG S + T P NLS R Sbjct: 12 DLKHRVITCLNKLSDRDTLAVGTAELESIARNLTHDSFSPFLSCLYGTDSSEKSPVRKQCVRLLGVLSETHGDSLSPHLSKMLSNVVRRLRDSDSAVRLACVDAVGVMSSQITKPPFSAFLKPLTDSILLEQDYNLQIGSALCIAAAIEAAPDPEPEQLLKLLPRLLKLAKSESFRAKPALLSLIGSIIGAGGASTRGVLNSLVPCLVEFLSSEDWAARKASAEALARLALVERDLATEFKSSSLSSLESRRFDKVKVVRDTMNRTLDLWKELPCDSNGLLPLSPSKASSKDNGAGGCFPPASKISCDVGFETPQPKKIIPTRSPPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVACEDDLKRRYLVVSDSEENGNCGDSRPETNRVLFSKISNEKMHKFGCLRSGSRIVPFHENNNSESAVVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSMLNLLQRFIGNSQSGINSLETRVNGLEMVLEEISFDLAISSGRVSNSDSAGNTCCKLPGAEFLSSKFWKRTEGH-TTSRFSSTGSIQALTTINNMPNKYASNMVDE----QKLQHQNLDGFVANPLADIH-------GTSRTLI--------------DGASPATQTMPVNLSRRL 643
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: W9RHA4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011017 PE=4 SV=1) HSP 1 Score: 468.003 bits (1203), Expect = 8.441e-149 Identity = 354/647 (54.71%), Postives = 438/647 (67.70%), Query Frame = -1 Query: 862 SPQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSV-LSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDV-PGVCEE--XXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTRRLDRSKSS-DWKIETVQPKSLFSE-ASGDYNIKRS----------------------VSFGKAHDEKVQKFGGLRSQSQVLPFHDEENL---DVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS----KNTIQNAE 2697 SPQ P DLK RV CLNKL+DRDTLALA+AEL+ IAR L DS SPFLN +HNTD+S+K+PVR+QCV LLTL+S SHG+ LSP LSKMIST+ RRLRDPDSAVRSACV+A AM+S IT+PPFS KPL+E + VEQD NSQIG+A+CL+AAIEAAPD + QL++ LP+LGKL +S+ FKAKAA+ +IGSV GGA S+GVLDW V VE LS DW RKAAA+AL +VA AE++LAA+YK C+ AL ++RFDKVK+VRETMN +L+LWK V G EE V T S+S S+S DNG CF +SK D GF+TPQ KK PT+RSPPS + + +++ N+ ++D SK WKIE P + SE D N+ R+ V F K +EK+ KFGGLRS S+V+PF ++E +V D NAA V +NPKD EDL LIREQL QIE+QQS+LL+LLQ+FIGSSQSG+NSLETRVNGLE+AL+EISY++A+SS RI DS +N CC LPGA+FLS KFWR+ E R+S+ R PSSG M S N KD+ E K + SR Q Q N + D S+ R G S K TIQ++E Sbjct: 14 SPQ-PAGSTQDLKHRVINCLNKLSDRDTLALATAELDYIARTLPHDSFSPFLNWIHNTDNSSKTPVRKQCVNLLTLLSNSHGDALSPFLSKMISTVVRRLRDPDSAVRSACVDAVAAMASRITRPPFSASFLKPLVETMSVEQDANSQIGSALCLAAAIEAAPDADAAQLRRSLPRLGKLAKSDGFKAKAALLVLIGSVVGAGGASSRGVLDWLVPSVVEFLSCNDWAVRKAAAEALARVATAERDLAAQYKDLCLNALESRRFDKVKVVRETMNHTLELWKGVCNGASEEIPVPTQSRSSSTSTDNGISRCFPPLSKSTQDGGFKTPQPKKTAPTNRSPPSGPDGSFANSVKKGSPLKSNDRNSTKVDHSKKPFGWKIEIAVPSAPSSEMVREDNNVGRNDFAVSDCRENKQCGNPQPETKHVVFSKTREEKLHKFGGLRSGSRVVPFDEDEKHGCSEVVDSNAAEEVYDNPKDAEDLSLIREQLLQIENQQSSLLDLLQRFIGSSQSGLNSLETRVNGLEIALEEISYNMAVSSRRIPTTDSAENTCCMLPGADFLSSKFWRRAEGRYSSPRFPSSGMMSSPN-------KDASAEFCK-SDSRRSQHQ-------NALADIQSNSR---GLSNRMPKTTIQDSE 641 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 2
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097648 ID=g.barbadense_cottongen_reftransV1_0097648; Name=g.barbadense_cottongen_reftransV1_0097648; organism=Gossypium barbadense; type=contig; length=2826bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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