g.barbadense_cottongen_reftransV1_0097648, g.barbadense_cottongen_reftransV1_0097648 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097648
Unique Nameg.barbadense_cottongen_reftransV1_0097648
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2826
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt02chromosomeg.barbadense_cottongen_reftransV1_0097648:1..2826 .
Dt02:60968145..60986227 -
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy Swiss-Prot
Match: MAPT_ARATH (Microtubule-associated protein TORTIFOLIA1 OS=Arabidopsis thaliana GN=TOR1 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 2.085e-27
Identity = 105/304 (34.54%), Postives = 166/304 (54.61%), Query Frame = -1
Query: 1843 TMSSKNRSPQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKP------------PFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPG 2718
            T S  N    +  Q + +LKQ++ T ++KLADRDT  +A  +LE   ++LT +++  FLNCL+++ S  K  V+++C+ LL+ +   H +  + HL+K+I+ + +RL+D DS VR AC +   A+S    K                +  KPL E +  EQ+   Q GA+MC++  +E+A  P     +K+ P++ KL+ + SF AK A    + S  S  GA +   L+  +    + L S DW TRKAAA+ L  +A     L  E   + +T L   RFDK+K VRE++  +L LWK + G
Sbjct:   24 TRSCSNSGSLTSFQAMVELKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVKKECLHLLSYVCSLHCDSTAAHLTKIIAQIVKRLKDSDSGVRDACRDTIGALSGIYLKGKEEGTNTGSASLAVGLFVKPLFEAM-GEQNKVVQSGASMCMARMVESAASPPVTSFQKLCPRICKLLSNSSFLAK-ASLLPVVSSLSQVGAIAPQSLESLLESIHDCLGSTDWVTRKAAAETLTALASHSSGLIKEKTDSTITVLETCRFDKIKPVRESVTEALQLWKKISG 325          

HSP 2 Score: 67.3958 bits (163), Expect = 4.999e-10
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = -1
Query:  952 IREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKF-WRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAG 1347
            I+ QL Q+E QQ+NL+N+LQ+FIG S   + +LE RV GLE  +++++ DL+ISSGR  N+ +   K      A + + K+  R    R S +     GRM         ++ D   + + P ++     QAG
Sbjct:  510 IQRQLLQLERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLERIVEDMARDLSISSGRRANLTAGFGKYNSF--ANYPTGKYNGRAPGERGSQTDGAMRGRM---------WNSDMADDWFIPPHAASRNGQAG 631          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy Swiss-Prot
Match: SP2L_ARATH (Microtubule-associated protein SPIRAL2-like OS=Arabidopsis thaliana GN=SP2L PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.679e-26
Identity = 96/292 (32.88%), Postives = 165/292 (56.51%), Query Frame = -1
Query: 1834 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNL--TVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPP------------FSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCE 2667
            +LKQR+ T L++L DRDT  +A  +LE I  ++  + + +   L+CL ++ S  K+PV+R+ + LL+ +  S+ ++    L+K+IS + +RL+D D+ VR AC +A  ++S+   K                + +KPL E +  EQ+ + Q GAA+C+   I++A +P     +K+ P++ KL+ S ++  K A    +    S  GA +   L+  +    E L   +W TRKAAAD L  +A+    L A+   + +TAL   RFDK+K VRE+++ +L++WK++ G  E
Sbjct:   36 ELKQRILTSLSRLGDRDTYQIAVDDLEKIVVSVPDSPEILPVLLHCLFDSSSDLKAPVKRESIRLLSFLCLSYTDLSFSQLAKIISHIVKRLKDADNGVRDACRDAIGSLSAQFLKEKEVENGNYVGSSLVGLFAKPLFEAM-AEQNKSLQSGAAICMGKMIDSATEPPVAAFQKLCPRISKLLNSPNYITK-ASLLPVVGSLSQVGAIAPQSLESLLHSIHECLGCTNWVTRKAAADVLISLAVHSSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNIAGKGE 325          

HSP 2 Score: 57.3806 bits (137), Expect = 5.366e-7
Identity = 25/56 (44.64%), Postives = 41/56 (73.21%), Query Frame = -1
Query: 1180 IREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSG 1347
            ++ QL  +E QQ++++N+LQ F+G S  G+ SLE RV GLE  ++E+S +++I SG
Sbjct:  503 LQRQLLHLERQQTHIMNMLQDFMGGSHDGMISLENRVRGLERIVEEMSREMSIQSG 558          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: B9HU87_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s04830g PE=4 SV=1)

HSP 1 Score: 511.531 bits (1316), Expect = 6.210e-166
Identity = 357/627 (56.94%), Postives = 432/627 (68.90%), Query Frame = -1
Query:  868 HDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNL-TVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNT---RRLDRSKSSDWKIETVQPKS-------------LFSEASGD----YNIKRSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEEN-----LDVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFSKNTIQN 2670
            +DLK RV  CLNKL+DRDT+++A+ ELESIA+NL T DS S FLNC+HNTDSS+KSPVR+QCV LLTL+S+SHGN LSPHLSKMIST+ RRLRDPDSAVRSACVEAT AMSS IT PPFS LSKPLI++L ++QD+N+QIGAA+CL+A IEAAP+PE EQL+KVLP+LGKLV+ E FKAKAA+  VI S+  VGGA SKG+LDW V C VE L SEDW  RKAAA+ALGKVA  EK+LA E+KA C+T+L  +RFDKVK+VRETMNR+L+LWK+VPG+ +E    S   S S  N    C +S SK   DVGFRTP SKK VP  R PPSDAS  + AKK++  KSN+ NS T    +L   + S WKIE   P+              L S  +GD        R V FG   D+K  KFGGL+S S+V+PF ++EN     ++V+      Y  EN KD EDL LIREQL QIE+QQS+LL+LLQ +IG SQ GINSLETRV+GLEMA++EISYDLA+SSGRI   +  +N CC LPGAEFLS KFWR TE R+                V N+  K++  E   P   R YQ Q   GF +N      S    N GF  + + N
Sbjct:   11 NDLKHRVIICLNKLSDRDTVSVATTELESIAKNLSTPDSFSHFLNCIHNTDSSSKSPVRKQCVSLLTLLSRSHGNSLSPHLSKMISTITRRLRDPDSAVRSACVEATFAMSSQITDPPFSTLSKPLIDLLTIDQDLNAQIGAALCLAAVIEAAPEPEVEQLRKVLPRLGKLVKGEGFKAKAALLSVIRSIVGVGGASSKGILDWLVPCLVEFLCSEDWAARKAAAEALGKVASIEKKLAKEHKATCLTSLETRRFDKVKVVRETMNRTLELWKEVPGISQE----SSVPSQSTYNVVGICISSASKNSKDVGFRTPLSKKTVPAIRFPPSDASPVTAAKKQSPAKSNDHNSKTGMLHKLGHDRHSAWKIEIATPEGKVSGDDTRNDSEVLGSGQNGDGTSSMRETRRVLFGSIRDDKWNKFGGLKSGSRVVPFQEDENCYNKVVEVSSSAEDFY--ENHKDYEDLSLIREQLIQIENQQSSLLDLLQGYIGRSQVGINSLETRVHGLEMAVNEISYDLAVSSGRIPKTNYAENTCCNLPGAEFLSSKFWR-TECRY----------------VSNVPVKNARIETCNPGSQR-YQHQNRGGFAVNTSAGYSSINGRNSGFYTSQMAN 613          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: A0A0A0KE01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401530 PE=4 SV=1)

HSP 1 Score: 508.834 bits (1309), Expect = 1.898e-164
Identity = 329/654 (50.31%), Postives = 435/654 (66.51%), Query Frame = -1
Query:  829 PQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTRRLDRSKSSDWKIETV---QPKSLFSE-----ASGDYNI-----------KRSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENL--------DVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS-----KNTIQNAERFQVGNASASD 2694
            PQ      HDLKQRV  CLNKL DRDTLA+A+ ELESIA+ LT DS S FL+C+HNTD+S+KSPVR+QCV L+ L+SQSHG+ LSP LSKMIST+ RRLRD DS +RSACV+AT  MSS ITKPPFSV  KPL+E L +EQD+NSQIG+A+CL+AA+EAAPDP+  QL+K L KLGKL ++E FKAKAA+  +IGS+ +VGGA S+ V+DW V C VE LS++DW  RKAAA+ LG+VA+AE++LAA+YKA+C+ +L ++RFDK+K+VRETMN++L+LWK++P    +          S DNG+ GCF   S    +   RTP  K V  +  SP   +   ++ K        NS++   +L+R KSS+W +E      P S F+        G  NI            + V +    DEKV K   LRS S+V+PF + +N+        DVT  +++     + K+ ED+ LIR+QL QIE+QQS+LLNLLQ FIGSSQSG+NSLE RV+GLEMALDEISYDL +SSGR+ N    +N CCKLPGAEFLS KFWR+ E R+S+S+  S+ ++ S N  H+  D+DS  E  K   ++ ++ +   G VMNP+ D   + R+N G       K  IQ  +   + NAS +D
Sbjct:   13 PQPAVAANHDLKQRVIACLNKLEDRDTLAMAANELESIAKALTYDSFSSFLSCIHNTDASSKSPVRKQCVYLIGLLSQSHGDALSPFLSKMISTVVRRLRDSDSTIRSACVDATALMSSQITKPPFSVFLKPLMETLTLEQDLNSQIGSALCLAAAVEAAPDPDVSQLRKNLTKLGKLAKNEGFKAKAALLVLIGSIIAVGGATSRSVMDWLVPCIVEFLSNDDWAVRKAAAETLGRVAVAERDLAADYKASCIISLDSRRFDKIKVVRETMNQTLELWKEIPDASGD---------ISTDNGNGGCFPPPSTCSPEQNLRTPLKKTVPTSRSSPLDVSRVTNSKKISPKNIGKNSSTPISKLERQKSSNWSVEIAVSNSPSSKFASENNAPGGGSENIDFQENENSRLNAKRVLYNNVRDEKVNKSSNLRSGSRVVPFEEHDNIQEDESRDSDVTVGSSSEETFGSHKEFEDISLIRDQLRQIENQQSSLLNLLQNFIGSSQSGMNSLEKRVHGLEMALDEISYDLGLSSGRVPNSSFAENSCCKLPGAEFLSSKFWRRAEGRYSSSKFCSTTQVSSPNDPHHTLDRDSVTEPLK-QNNQIFRTERRGGLVMNPLADIDGEFRENMGLYPKRLLKTMIQENDNVHIYNASGTD 656          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: B9S2H6_RICCO (Microtubule-associated protein TORTIFOLIA1, putative OS=Ricinus communis GN=RCOM_0699600 PE=4 SV=1)

HSP 1 Score: 507.679 bits (1306), Expect = 4.713e-164
Identity = 360/638 (56.43%), Postives = 441/638 (69.12%), Query Frame = -1
Query:  853 HDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNL-TVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNT---RRLDRSKSSDWKIETVQPKSLFS-------------EASGDYN-------IKRSVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENL---DVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGF-----SKNTIQNAERFQ 2670
            +DLK RV +CLNKL+DRDTL LA+ ELE+IA+ L T D+ S FL C++NTDSS +SPVR+ CV LLTL+S SHGN L+PH SKMISTL RRL DPDSAVR+ACVEATTAMSS ITKPPFS LSKPLIE++ VE+D N QIG+A+CL+AAIEAAP PE E L+K+LP+LGKLVR + FKAKAA+  VIGS+ SVGGA SKGVLDW + C VE LS +DW +RKAAA+ LGK+A+AEKELA E+KA C++ L N+RFDKVK VRETMNR+L+LWK VPGV +EVS  SQS  SSIDN     F S     N+VGF  P  KK V  +RSP SD+S  +TA+K++  K  N NS T   R+ +  ++S WKIE   P+                 E+  D N        KR V F     +K+ K GG RS S+V+P +D+++    DV   N      EN KDIEDL LI +QL QIE+QQS+LL+LLQKFIGSSQ GINSLETRVNGLEMALDEISYDLA+S+GR+ NMDS DN CCKLPG   L  KFWR+TE + STSR    G + SL+A  N+ D+D+    +  A S   Q Q  SG V++P       +R N G+     S N IQ+  + Q
Sbjct:   20 NDLKNRVISCLNKLSDRDTLLLATTELETIAKTLATHDAFSSFLTCIYNTDSSCRSPVRKHCVNLLTLLSNSHGNSLAPHFSKMISTLTRRLHDPDSAVRAACVEATTAMSSQITKPPFSTLSKPLIEIMTVEKDFNCQIGSALCLAAAIEAAPQPELEMLRKMLPRLGKLVRGDGFKAKAALLSVIGSIVSVGGAKSKGVLDWLMPCLVEFLSCDDWSSRKAAAEVLGKLAVAEKELAKEHKAVCLSCLENRRFDKVKAVRETMNRTLELWKQVPGVSDEVSVPSQSKFSSIDNAISESFPSAPHNSNEVGFNHPVPKKTVLANRSPLSDSSVVTTARKQSPAKCINDNSKTSMFRKSEHKETSAWKIEIALPQDTGGCEEDIKRQDFGGFESGEDVNNGKCRPETKR-VLFNSIRKDKLHKSGGFRSGSRVVPCNDDDDCYSKDVEVNNPTEESIENSKDIEDLSLIHDQLIQIENQQSHLLDLLQKFIGSSQHGINSLETRVNGLEMALDEISYDLALSTGRLPNMDSADNTCCKLPGT--LCSKFWRRTEGQSSTSRFSFPGSIGSLHAAQNIRDRDARTASFN-ANSERSQSQIRSGLVISP-------LRRNSGYYSSQLSSNIIQDDGQVQ 646          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: F6HPI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01020 PE=4 SV=1)

HSP 1 Score: 506.138 bits (1302), Expect = 1.227e-163
Identity = 341/658 (51.82%), Postives = 443/658 (67.33%), Query Frame = -1
Query:  778 DLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSVLSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDVPGVCEEXXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNT---RRLDRSKSSDWKIETVQPKSLFSEASGDYNIKR----------------------SVSFGKAHDEKVQKFGGLRSQSQVLPFHDEENLD--VTDKNAA-LYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFSKNTIQNAERFQVGNASASDGTSLVSCTAPTNLSSRF 2667
            DLK RV TCLNKL+DRDTLA+ +AELESIARNLT DS SPFL+CL+ TDSS KSPVR+QCV LL ++S++HG+ LSPHLSKM+S + RRLRD DSAVR ACV+A   MSS ITKPPFS   KPL + +++EQD N QIG+A+C++AAIEAAPDPE EQL K+LP+L KL +SESF+AK A+  +IGS+   GGA ++GVL+  V C VE LSSEDW  RKA+A+AL ++A+ E++LA E+K++ +++L ++RFDKVK+VR+TMNR+LDLWK++P     +   S S +SS DNG+ GCF   SK   DVGF TPQ KK++PT   P  ++   +  K+     SNN  S T   R+LD  K SDWK+E   P    S+ + + ++KR                       V F K  +EK+ KFG LRS S+++PFH+  N +  V D NA    + EN KDIEDL LIR+QL QIE+QQS++LNLLQ+FIG+SQSGINSLETRVNGLEM L+EIS+DLAISSGR+ N DS  N CCKLPGAEFLS KFW++TE   +TSR  S+G + +L  ++N+ +K +   + +    +  Q Q   GFV NP+ D         G S+  I              DG S  + T P NLS R 
Sbjct:   12 DLKHRVITCLNKLSDRDTLAVGTAELESIARNLTHDSFSPFLSCLYGTDSSEKSPVRKQCVRLLGVLSETHGDSLSPHLSKMLSNVVRRLRDSDSAVRLACVDAVGVMSSQITKPPFSAFLKPLTDSILLEQDYNLQIGSALCIAAAIEAAPDPEPEQLLKLLPRLLKLAKSESFRAKPALLSLIGSIIGAGGASTRGVLNSLVPCLVEFLSSEDWAARKASAEALARLALVERDLATEFKSSSLSSLESRRFDKVKVVRDTMNRTLDLWKELPCDSNGLLPLSPSKASSKDNGAGGCFPPASKISCDVGFETPQPKKIIPTRSPPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVACEDDLKRRYLVVSDSEENGNCGDSRPETNRVLFSKISNEKMHKFGCLRSGSRIVPFHENNNSESAVVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSMLNLLQRFIGNSQSGINSLETRVNGLEMVLEEISFDLAISSGRVSNSDSAGNTCCKLPGAEFLSSKFWKRTEGH-TTSRFSSTGSIQALTTINNMPNKYASNMVDE----QKLQHQNLDGFVANPLADIH-------GTSRTLI--------------DGASPATQTMPVNLSRRL 643          
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Match: W9RHA4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011017 PE=4 SV=1)

HSP 1 Score: 468.003 bits (1203), Expect = 8.441e-149
Identity = 354/647 (54.71%), Postives = 438/647 (67.70%), Query Frame = -1
Query:  862 SPQSPQQQLHDLKQRVFTCLNKLADRDTXXXXXXXXXSIARNLTVDSISPFLNCLHNTDSSAKSPVRRQCVILLTLMSQSHGNVLSPHLSKMISTLARRLRDPDSAVRSACVEATTAMSSHITKPPFSV-LSKPLIEMLVVEQDVNSQIGAAMCLSAAIEAAPDPETEQXXXXXXXXXXXVRSESFKAKXXXXXXXXXXXXXXXXXXXXVLDWFVSCAVESLSSEDWGTRKAAADALGKVXXXXXXXXXXXXXACVTALGNKRFDKVKIVRETMNRSLDLWKDV-PGVCEE--XXXXXXXXXXXXXXXXXGCFTSVSKGMNDVGFRTPQSKKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTRRLDRSKSS-DWKIETVQPKSLFSE-ASGDYNIKRS----------------------VSFGKAHDEKVQKFGGLRSQSQVLPFHDEENL---DVTDKNAALYVDENPKDIEDLCLIREQLAQIEDQQSNLLNLLQKFIGSSQSGINSLETRVNGLEMALDEISYDLAISSGRILNMDSTDNKCCKLPGAEFLSPKFWRKTESRFSTSRLPSSGRMLSLNAVHNLYDKDSGGEMYKPAYSRGYQRQAGSGFVMNPVGDAGSDIRDNPGFS----KNTIQNAE 2697
            SPQ P     DLK RV  CLNKL+DRDTLALA+AEL+ IAR L  DS SPFLN +HNTD+S+K+PVR+QCV LLTL+S SHG+ LSP LSKMIST+ RRLRDPDSAVRSACV+A  AM+S IT+PPFS    KPL+E + VEQD NSQIG+A+CL+AAIEAAPD +  QL++ LP+LGKL +S+ FKAKAA+  +IGSV   GGA S+GVLDW V   VE LS  DW  RKAAA+AL +VA AE++LAA+YK  C+ AL ++RFDKVK+VRETMN +L+LWK V  G  EE  V T S+S S+S DNG   CF  +SK   D GF+TPQ KK  PT+RSPPS    +     +      +++ N+ ++D SK    WKIE   P +  SE    D N+ R+                      V F K  +EK+ KFGGLRS S+V+PF ++E     +V D NAA  V +NPKD EDL LIREQL QIE+QQS+LL+LLQ+FIGSSQSG+NSLETRVNGLE+AL+EISY++A+SS RI   DS +N CC LPGA+FLS KFWR+ E R+S+ R PSSG M S N       KD+  E  K + SR  Q Q       N + D  S+ R   G S    K TIQ++E
Sbjct:   14 SPQ-PAGSTQDLKHRVINCLNKLSDRDTLALATAELDYIARTLPHDSFSPFLNWIHNTDNSSKTPVRKQCVNLLTLLSNSHGDALSPFLSKMISTVVRRLRDPDSAVRSACVDAVAAMASRITRPPFSASFLKPLVETMSVEQDANSQIGSALCLAAAIEAAPDADAAQLRRSLPRLGKLAKSDGFKAKAALLVLIGSVVGAGGASSRGVLDWLVPSVVEFLSCNDWAVRKAAAEALARVATAERDLAAQYKDLCLNALESRRFDKVKVVRETMNHTLELWKGVCNGASEEIPVPTQSRSSSTSTDNGISRCFPPLSKSTQDGGFKTPQPKKTAPTNRSPPSGPDGSFANSVKKGSPLKSNDRNSTKVDHSKKPFGWKIEIAVPSAPSSEMVREDNNVGRNDFAVSDCRENKQCGNPQPETKHVVFSKTREEKLHKFGGLRSGSRVVPFDEDEKHGCSEVVDSNAAEEVYDNPKDAEDLSLIREQLLQIENQQSSLLDLLQRFIGSSQSGLNSLETRVNGLEIALEEISYNMAVSSRRIPTTDSAENTCCMLPGADFLSSKFWRRAEGRYSSPRFPSSGMMSSPN-------KDASAEFCK-SDSRRSQHQ-------NALADIQSNSR---GLSNRMPKTTIQDSE 641          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
MAPT_ARATH2.085e-2734.54Microtubule-associated protein TORTIFOLIA1 OS=Arab... [more]
SP2L_ARATH3.679e-2632.88Microtubule-associated protein SPIRAL2-like OS=Ara... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0097648 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9HU87_POPTR6.210e-16656.94Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A0A0KE01_CUCSA1.898e-16450.31Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
B9S2H6_RICCO4.713e-16456.43Microtubule-associated protein TORTIFOLIA1, putati... [more]
F6HPI9_VITVI1.227e-16351.82Putative uncharacterized protein OS=Vitis vinifera... [more]
W9RHA4_9ROSA8.441e-14954.71Uncharacterized protein OS=Morus notabilis GN=L484... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 457..477
NoneNo IPR availablePANTHERPTHR31355:SF3ARM REPEAT SUPERFAMILY PROTEIN-RELATEDcoord: 1..605
IPR026003HEAT repeat associated with sister chromatid cohesion proteinPFAMPF12765Cohesin_HEATcoord: 96..120
e-value: 5.8E-5
score: 23.1
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 10..323
e-value: 2.0E-54
score: 184.6
IPR033337MT-associated protein TORTIFOLIA1/SPIRAL2-likePANTHERPTHR31355FAMILY NOT NAMEDcoord: 1..605
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..283

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097648 ID=g.barbadense_cottongen_reftransV1_0097648; Name=g.barbadense_cottongen_reftransV1_0097648; organism=Gossypium barbadense; type=contig; length=2826bp
ATCGGTAATATATAAAGATACACTTGCAATAATCCCAAAACAGTGCAAAT
TTCTCCTAAACGCACACCGACCCATTCTAAAATAATCCGTCCTGAAACCA
ATATTAAAAAAATATCTTACCTTTATCAGATGGGTTTCGTAACCTGTCAG
GCTCTTTTTTTGCCATCCCAAGTAATTAGAGTTGCCGATTCACGCTGCAT
AATTGCATTTACATTACTCTACACTTTACAAACTCATCCTTAACTTCAGA
TATTTTACATTATTAACTCTAAATCCGTATTGAATTTTCGTGTCATACAA
TACAACACGAGAAGTAACTACTAGAATGTTGGAACTGTTGTTTCTTTTCT
TTTCTTGGGGGTTCAATTGATGAAAAACTTGATGGCCTAGGATTGAAATT
TTATATGCAGTACACAAGAACTAGTAACAAGAAAAGATAAAAACGAGATG
CACATAGTCTCTCTGTACACGGAAGGGACCTCCCCGCCTCTACTGCAAAC
CCACTCAGTGAGGGGGACAGGTTTCTGTTGGAACACCATATATTCTGTGC
CTGCCTTGCGCGAAAGCCAGCCATTGGCATTTTTCAGTTAATTTACTCAC
GGAATCAAAAAGTAAATCTACTATCTCCTGTAACAACCCAGAATGCTGCA
CCTCATCATTACATGATCTACGATTACATCGTATCATTTCATCTTCAACC
TCCATTCTCCAAGGTGCTTCTCCGCTAGCTTCAGCTGCTTCTTCAAACAC
CCCCAACTTCAATCCAAGTTAAGCTCAAAATCTGCTGCTAAGGTTCGTTG
GAGCTGTACAACTAACCAGGGAAGTCCCATCAGAAGCACTAGCATTGCCA
ACCTGGAACCTCTCAGCATTTTGAATGGTGTTCTTTGAGAACCCTGGATT
ATCTCTTATGTCACTGCCAGCATCACCCACTGGGTTCATAACAAATCCAC
TTCCAGCTTGACGCTGATATCCTCGGCTGTATGCTGGCTTATACATTTCA
CCCCCAGAATCTTTATCATATAAGTTATGTACTGCATTTAGCGAAAGCAT
GCGGCCCGAAGAAGGTAACCTTGAAGTAGAAAACCGACTTTCAGTTTTCC
TCCAGAACTTGGGACTCAAAAATTCAGCACCAGGCAGCTTGCAACATTTG
TTATCTGTAGAATCCATGTTCAGAATCCTGCCACTTGAAATGGCCAAGTC
ATATGATATTTCATCCAGAGCCATCTCCAGGCCATTTACGCGTGTCTCTA
GAGAATTGATCCCACTTTGGGAGCTCCCAATGAATTTCTGGAGGAGGTTC
AATAGATTGGACTGCTGATCTTCAATCTGAGCAAGTTGTTCACGGATCAA
ACACAGATCCTCGATGTCTTTTGGATTCTCATCGACATATAGAGCAGCAT
TTTTATCAGTAACATCTAAATTCTCCTCGTCATGAAAAGGAAGCACCTGA
GACTGAGACCTCAAACCGCCAAATTTCTGCACTTTTTCGTCATGGGCCTT
GCCAAAGGATACACTCCTTTTGATATTGTAATCACCAGAGGCCTCAGAAA
ACAAAGACTTCGGCTGAACAGTTTCAATCTTCCAATCAGAAGATTTTGAG
CGGTCCAGCCTACGAGTGTTACTGTTGCTATTATTACTTTTCAGGGATGT
CTCTTTCTTGGCAGTGGACGCAGCCGAGGCATCAGAAGGAGGGGACCTGC
TCGTAGGGACAACTTTTTTTGATTGGGGAGTTCTAAAACCAACATCATTC
ATACCTTTGGAAACTGAAGTAAAGCATCCAACGCTACCATTATCTATTGA
AGATGAGTCGGATTGAGAAGTGGTGGAGACTTCCTCACAAACTCCAGGAA
CATCCTTCCATAAATCCAAACTACGATTCATGGTTTCTCGGACAATCTTT
ACCTTATCAAACCTCTTATTGCCAAGAGCGGTCACACACGCCGCTTTATA
CTCAGCTGCCAGTTCTTTCTCCGCCATAGCCACCTTCCCTAACGCGTCCG
CCGCCGCCTTTCTCGTTCCCCAGTCTTCGCTACTCAAAGACTCCACCGCG
CATGACACAAACCAATCCAGGACTCCTTTACTTCCGGCACCGCCAACACT
AGCGACGCTTCCAATAACTCCAAACACCGCCGCTTTCGCTTTGAAACTCT
CGCTCCTTACTAACTTCCCCAACTTCGGCAACACCTTCTTAAGCTGCTCC
GTCTCGGGATCCGGCGCCGCCTCGATCGCCGCGGACAAACACATCGCCGC
ACCGATCTGCGAGTTAACGTCTTGCTCCACCACGAGCATTTCGATCAAAG
GCTTCGACAAAACAGAAAATGGAGGCTTCGTGATGTGAGACGACATAGCG
GTCGTTGCCTCGACACAAGCGGACCGGACGGCGGAGTCGGGGTCACGGAG
GCGGCGAGCAAGGGTGGAAATCATCTTAGAAAGGTGGGGAGATAAGACGT
TACCGTGCGACTGAGACATCAAAGTCAAAAGGATTACACATTGCCTCCGA
ACGGGAGACTTGGCGGAAGAGTCGGTATTGTGAAGGCAGTTGAGGAAGGG
AGAGATGGAATCGACAGTCAGGTTCCGAGCGATGGACTCGAGCTCAGCGG
AAGCGAGAGCGAGAGTGTCGCGGTCGGCGAGTTTGTTAAGGCAAGTGAAA
ACGCGTTGTTTGAGATCGTGCAGTTGCTGTTGAGGACTTTGCGGTGACCG
ATTCTTGGAAGACATTGTTGTTTATGGCTAAGCTTTGATTTCCGCGACGC
CTTCCCCTTCTAACCTTTGGGTCTAACACTTGCAGCAGCATTCGAGAGGA
AAATGGAATTGGCGGAGAAATTTTAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR026003Cohesin_HEAT
IPR011989ARM-like
IPR033337TORTIFOLIA1/SPIRAL2-like
IPR016024ARM-type_fold
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding