g.barbadense_cottongen_reftransV1_0097647, g.barbadense_cottongen_reftransV1_0097647 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097647
Unique Nameg.barbadense_cottongen_reftransV1_0097647
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2334
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At05chromosomeg.barbadense_cottongen_reftransV1_0097647:1..2323 .
At05:21935774..21938100 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=3 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 5.265e-78
Identity = 163/577 (28.25%), Postives = 290/577 (50.26%), Query Frame = 1
Query:  433 NPTTFSSLLASCVRLKSLTHGR----QIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNG---RLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            N    SS + +C  L     GR    Q+ + +  +G + + ++   L   Y   G+I+ A+ VFD     +  +W  ++ G V  GR  Y+  L  F ++    V  + Y  STVL + +       G + HA +++YG    + L   LI+ Y KCG++  AH++F  +P ++II W  +++G+  N + +EA+     M   G+ P+    ++IL     + A   G +VHAY +K  +      + + LIDMY KC  +   R+VF      + + + A++ GY   G    L +AL     M+    +P ++T  ++L   A L +L    +IH    K     ++   ++L+ +YS C  L  S  +F+ ++ ++++ W +M   Y +     EA+ +F  +QLS+ RPD    A M+   G L +++LG+E H Q+LK+  E  P ++  ++ MY  CG   +A   FD+   +  + W ++I ++  +   + A+ +  +M+S+G  PN+ TF  VLS C  AGLV++  + F +M R + ++   EHY  M+ LL  +GR  +A   I+
Sbjct:  145 NEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRS-YVS-LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKA-NLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIE 715          

HSP 2 Score: 229.95 bits (585), Expect = 1.522e-62
Identity = 141/496 (28.43%), Postives = 251/496 (50.60%), Query Frame = 1
Query:  502 IHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEM-RSLAVNLNEYTFSTVLKSFAGASAFRQGL--KAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGC---LPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTF 1971
            +H  I   GLE + +L   L ++Y+  G +  A++VF++    N  SW+ ++  S  +    Y + L  F E  R+   + NEY  S+ +++ +G     + +  +  + LVK GF     + T LI+ Y K G I  A  VF+ +PE+  + W  +I+G         +L     ++ + + P+  IL+T+L     +   + G+++HA++++        S+ + LID Y KCG + +  ++F     +N ISWT L+SGY  N   ++A+     M + G KPD+   +++L  CA L AL  G ++HAY +K     +  +  SL+ MY+KC  L  + K+F+   A +V+ + AMIE Y+  G    L EA+ +FR M+    RP  +    +L     L ++ L K+IHG + K          + ++ +Y  C  + +++LVFD ++VK  + W ++   +      E A++LF ++      P+ FTF
Sbjct:   66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMV--SACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY-GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558          

HSP 3 Score: 185.652 bits (470), Expect = 8.709e-48
Identity = 143/548 (26.09%), Postives = 254/548 (46.35%), Query Frame = 1
Query:  445 FSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQ---REALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSG--LIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVK-GSMTWTAIIEA---HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVK 2061
             S++L++C  L  L  G+QIHAHI   GLE +  L   L   Y  CG +  A ++F+   + N  SW  LL G   +   +  + +  F+ M    +  + Y  S++L S A   A   G + HA  +K    N S +   LI++Y KC  +  A +VF+     D++L+ A+I G++    Q    EALN  R M    I P+ +   ++L     + +  + +++H  + K   Y   L I +G  LID+Y  C  ++  R VF     ++ + W ++ +GY+     E+AL   + +Q    +PD  T A ++     L ++  G E H   +K     N  I  +L+ MY+KCG  + + K F+   +R+V+ W ++I SYA  G   +A+ +   M      P+ +    +L+ C     ++ G +    +L+   E        MV + G  G ++ A+ + + +  K  ++ W +++      G  +L E A  +   ++SD      FT  ++ +I    G+  EA ++   M  +  VK
Sbjct:  252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHK--EAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK---YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM--AILSDPKDSGSFT--MLSNIYASKGMWTEAKKVRERMKVEGVVK 790          

HSP 4 Score: 177.178 bits (448), Expect = 6.694e-45
Identity = 107/398 (26.88%), Postives = 205/398 (51.51%), Query Frame = 1
Query:  814 HALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREAL-NYARWMISEGIYPNSVILTTILPVIGEVWARKVGQ--EVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDL-----CEGAISLFHQMISDGFTPNHFTFKVVL 1983
            H  ++ +G    + L   LI LY + G +  A +VFE++PER+++ W  +++   H+ +  E+L  +  +  +    PN  IL++ +     +  R      ++ +++VK+  + + + + + LID Y K G+++  R VF    E++ ++WT ++SG +  GR   +L+    + ++   PD   ++TVL  C+ L  L  G +IHA+ ++     + S++  L+  Y KCG +  + KLFNG+  +N+ISWT ++  Y ++    EA+ +F SM     +PD    + +L  C  L A+  G ++H   +K +  +   V+  ++ MY  C  +++A+ VFD       + + A+IE  GY+ L        A+++F  M      P+  TF  +L
Sbjct:   67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKS-GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE--GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461          

HSP 5 Score: 169.088 bits (427), Expect = 2.844e-42
Identity = 104/413 (25.18%), Postives = 203/413 (49.15%), Query Frame = 1
Query:  367 RQNKL-KEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYL-DVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEAR-NVISWTAMIESYAESG 1596
            +QN L KEA+ +   + + G+  +    SS+L SC  L +L  G Q+HA+     L N+ ++   L  MY  C  + DA++VFD   + +   +NA++ G    G +  L + L+ F +MR   +  +  TF ++L++ A  ++     + H L+ KYG        + LI++Y  C  +K +  VF+E+  +D+++W ++ AG+       EALN    +      P+      ++   G + + ++GQE H  ++K +       I + L+DMY KCG  E   + F  +  R+ + W +++S Y ++G  ++AL+ +  M  EG +P+ +T   VL  C+    +  G++     ++    P       ++ +  + G L+ + +L   +  +   I W +++   A++G
Sbjct:  326 KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737          

HSP 6 Score: 116.316 bits (290), Expect = 2.550e-25
Identity = 86/333 (25.83%), Postives = 159/333 (47.75%), Query Frame = 1
Query:  352 IQAFAR---QNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSG----------LIDMYCKCGDMESGRQVF-YCSGERNAISWTALMSGYISNGRLEQA 1308
            I+ ++R   Q +L EAL I   +  + I  +  TF SLL +   L SL   +QIH  +   GL  + F  + L  +Y++C  ++D++ VFDE    +   WN++  G V        + L+ F E++      +E+TF+ ++ +    ++ + G + H  L+K G   +  +   L+++Y KCG  + AH+ F+    RD++ W +VI+ +A++   ++AL     M+SEGI PN +    +L               HA +V+      +L ++ G          ++ +  + G +   R++      +  AI W +L+SG    G +E A
Sbjct:  423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENE--EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS-----------HAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 8.058e-78
Identity = 178/606 (29.37%), Postives = 314/606 (51.82%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHA----HIRTNGLE-NNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLD-VLSTFSEMRSLA-VNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGA--ISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            +       KL+EA+ +L+ + +  + V+   F +L+  C   ++   G ++++     + + G+E  N FL      M+   G++ DA  VF + +  N +SWN L+ G    G   Y D  +  +  M  +  V  + YTF  VL++  G     +G + H  +V+YG+     +   LI +Y KCG +K A  +F+ +P RDII W A+I+G+  N M  E L     M    + P+ + LT+++     +  R++G+++HAYV+ T  ++  +S+ + L  MY   G      ++F     ++ +SWT ++SGY  N   ++A+ +   M Q+  KPD +TVA VL  CA L  L+ G+E+H  A+K      V +  +L+ MYSKC  +D +L +F+ +  +NVISWT++I     +    EA+   R M+++  +P+++ +   L  C  + A+  GKEIH  VL+        +   ++ MY  CG M+ A   F++ + K   +W  ++   GY++  +G+  + LF +M+     P+  TF  +L  C K+ +V +    FS M   Y V  + +HY  +++LL  +G  +EA +FIQ
Sbjct:   66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA-----MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG---YFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTL-QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLT--GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQ 657          

HSP 2 Score: 184.496 bits (467), Expect = 2.502e-47
Identity = 130/520 (25.00%), Postives = 251/520 (48.27%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQ-QGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVK-----NCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNA-KLVFDAVRVKGSMTWTAIIEA 1884
            +  +A+Q    EA+ +   +    G+  +  TF  +L +C  +  L  G+++H H+   G E +  +   L  MY  CG ++ A+ +FD     +  SWNA++ G   +G     + L  F  MR L+V+ +  T ++V+ +       R G   HA ++  GF     +   L ++Y   G  + A ++F  +  +DI+ W  +I+G+ +N +  +A++  R M  + + P+ + +  +L     +     G E+H   +K +  S  + + + LI+MY KC  ++    +F+    +N ISWT++++G   N R  +AL  +  M+    +P+ +T+   L  CA++ AL  G EIHA+ ++     + F PN     +L+ MY +CG ++ +   FN  + ++V SW  ++  Y+E G     + +F  M  S+ RPD +    +L  C + + ++ G     ++  +D+   P++   A +V + G  G +  A K +           W A++ A
Sbjct:  167 VGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH--EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI-VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN-----ALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM--EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP237_ARATH (Pentatricopeptide repeat-containing protein At3g16610 OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.542e-77
Identity = 168/575 (29.22%), Postives = 299/575 (52.00%), Query Frame = 1
Query:  445 FSSLLASCVRLKSLTHGRQIHAHIRTNGLE-NNEFLRAKLAHMYTSCGSIEDAQRVFDECTSN--NAYSWNALLRGSVVSG-RKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMIS-EGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVAT--VLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPE-AIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTR-KYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            F SLL +C+R ++L  G+ IH H+    L  ++  +   L  +Y SC  +E A+ VFDE      N  +W+ ++R    +   ++ LD+   + +M +  V   +YT+  VLK+ AG  A   G   H+ +    F     + T L++ Y KCG++++A +VF+E+P+RD++ W A+I+GF+ +    + +     M   +G+ PN   +  + P +G   A + G+ VH Y  +   +S  L +++G++D+Y K   +   R+VF    ++N ++W+A++ GY+ N  +++A      M        V  VA   +L  CA+   L+ G  +H YAVK  F  ++++  +++  Y+K G L  + + F+ +  ++VIS+ ++I     + C PE +  +F  M+ S  RPD   +  +L  C  L A+  G   HG  +   +    S+   ++ MY  CG +  AK VFD +  +  ++W  ++   G + L + A+SLF+ M   G  P+  T   +LS C  +GLVDE  Q+F+ M+R  + V    +HY  M +LL  +G  +EA  F+ 
Sbjct:    2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDL---YYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM-GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVN-CRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVN 571          

HSP 2 Score: 239.58 bits (610), Expect = 9.083e-67
Identity = 151/534 (28.28%), Postives = 266/534 (49.81%), Query Frame = 1
Query:  310 LPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSL-AVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALN-YARWMISEGI-YPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAE--MVKMYGACGLMSNA-----KLVFDA-VRVKGSM---TWT 1869
            +P    NP A    I+A+A  +  ++AL +   +   G+     T+  +L +C  L+++  G+ IH+H+  +    + ++   L   Y  CG +E A +VFDE    +  +WNA++ G   S      DV+  F +MR +  ++ N  T   +  +   A A R+G   H    + GF N  +++TG++++Y K   I  A RVF+   +++ + W A+I G+  N M +EA   + + ++++ +     V +  IL           G+ VH Y VK   +   L++Q+ +I  Y K G +    + F   G ++ IS+ +L++G + N R E++ R    M+  G +PD+ T+  VL  C+ L AL HG   H Y V + +  N SI  +LM MY+KCG LD + ++F+ +  R+++SW  M+  +   G   EA+ +F SMQ +   PD V +  +L+ C     +  GK++   + + DF  IP +     M  +    G +  A     K+ F+  +RV G++    WT
Sbjct:   61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISG--FSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA-GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWT 591          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 1.111e-76
Identity = 162/588 (27.55%), Postives = 284/588 (48.30%), Query Frame = 1
Query:  385 EALAILDYVDQQ--GIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            EA AI  + D    GI   P  FSS+L++C +++SL  G Q+H  +   G  ++ ++   L  +Y   G++  A+ +F   +  +A ++N L+ G    G       +  F  M    +  +  T ++++ + +      +G + HA   K GF +++ +   L+ LY KC  I+ A   F E    +++LW  ++  +      R +    R M  E I PN     +IL     +   ++G+++H+ ++KT ++     + S LIDMY K G +++   +      ++ +SWT +++GY      ++AL +   M   G + D V +   +  CA L+AL  G +IHA A  + F  ++    +L+ +YS+CG ++ S   F   EA + I+W A++  + +SG   EA+ VF  M       ++      +    E   +K GK++H  + K  ++S   V   ++ MY  CG +S+A+  F  V  K  ++W AII A+  +     A+  F QMI     PNH T   VLS C   GLVD+    F  M  +Y +    EHY  ++++L  +G    A+ FIQ
Sbjct:  269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE--KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853          

HSP 2 Score: 245.743 bits (626), Expect = 2.324e-67
Identity = 154/545 (28.26%), Postives = 273/545 (50.09%), Query Frame = 1
Query:  400 LDYVDQQGIPVNPTTFSSLLASCVRLK-SLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGAS-AFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQI 2028
            +D V+ +GI  N  T   LL  C++   SL  GR++H+ I   GL++N  L  KL   Y   G +  A +VFDE      ++WN +++   ++ R    +V   F  M S  V  NE TFS VL++  G S AF    + HA ++  G  +S+++   LI+LY + G + LA RVF+ +  +D   W A+I+G + N  + EA+     M   GI P     +++L    ++ + ++G+++H  V+K   +S    + + L+ +Y   G++ S   +F    +R+A+++  L++G    G  E+A+     M  +G +PD  T+A+++  C+    L  G ++HAY  K  F  N  I  +L+ +Y+KC  ++ +L  F   E  NV+ W  M+ +Y     L  +  +FR MQ+ +  P+      +L  C  L  ++LG++IH Q++K +F+    V + ++ MY   G +  A  +      K  ++WT +I  +   +  + A++ F QM+  G   +       +S C     + E  QI
Sbjct:   72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE--LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613          

HSP 3 Score: 207.994 bits (528), Expect = 1.375e-54
Identity = 133/511 (26.03%), Postives = 238/511 (46.58%), Query Frame = 1
Query:  382 KEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESI---------PSVSAEMVKMYGACGLMSNAKLVFDAVRVK-GSMTWTAIIEA 1884
            ++A+ +   +   G+  +  T +SL+ +C    +L  G+Q+HA+    G  +N  +   L ++Y  C  IE A   F E    N   WN +L    +    R  +    F +M+   +  N+YT+ ++LK+         G + H+ ++K  F  ++ + + LI++Y K GK+  A  +      +D++ W  +IAG+       +AL   R M+  GI  + V LT  +     + A K GQ++HA       +S  L  Q+ L+ +Y +CG +E     F  +   + I+W AL+SG+  +G  E+ALR  V M +EG   +  T  + +   ++   +  G ++HA   K  +     +  +L+ MY+KCG +  + K F  +  +N +SW A+I +Y++ G   EA+  F  M  S  RP+ V +  +L+ C  +  +  G           FES+         P     +V M    GL+S AK     + +K  ++ W  ++ A
Sbjct:  371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR--NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY--------FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870          

HSP 4 Score: 162.54 bits (410), Expect = 7.342e-40
Identity = 102/420 (24.29%), Postives = 195/420 (46.43%), Query Frame = 1
Query:  790 AFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVI-GEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTR 2046
            +  +G K H+ ++K G  ++  L   L + Y   G +  A +VF+E+PER I  W  +I   A   +  E       M+SE + PN    + +L    G   A  V +++HA ++  +       + + LID+Y + G ++  R+VF     ++  SW A++SG   N    +A+R    M   G  P     ++VL  C ++ +L  G ++H   +K  F  +  +  +L+ +Y   G L  +  +F+ +  R+ +++  +I   ++ G   +A+ +F+ M L    PDS  +A ++  C     +  G+++H    K  F S   +   ++ +Y  C  +  A   F    V+  + W  ++ A+G  D    +  +F QM  +   PN +T+  +L  C + G ++   QI S + +
Sbjct:  100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL-YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518          

HSP 5 Score: 162.54 bits (410), Expect = 7.342e-40
Identity = 97/354 (27.40%), Postives = 168/354 (47.46%), Query Frame = 1
Query:  358 AFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLD-VLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGM 1416
            A+   + L+ +  I   +  + I  N  T+ S+L +C+RL  L  G QIH+ I     + N ++ + L  MY   G ++ A  +       +  SW  ++ G     +  + D  L+TF +M    +  +E   +  + + AG  A ++G + HA     GF +    +  L+ LY +CGKI+ ++  FE+    D I W A+++GF  +    EAL     M  EGI  N+    + +    E    K G++VHA + KT  Y  +  + + LI MY KCG +    + F     +N +SW A+++ Y  +G   +AL S   M     +P+ VT+  VL  C+ +  ++ G+
Sbjct:  464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT---QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813          

HSP 6 Score: 123.25 bits (308), Expect = 2.022e-27
Identity = 78/328 (23.78%), Postives = 154/328 (46.95%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGL----------IDMYCKCGDMESGRQVFY-CSGERNAISWTALMSGYISNGRLE 1302
            I  + + N   +AL     +  +GI  +    ++ +++C  L++L  G+QIHA    +G  ++   +  L  +Y+ CG IE++   F++  + +  +WNAL+ G   SG     + L  F  M    ++ N +TF + +K+ +  +  +QG + HA++ K G+ + + +   LI +Y KCG I  A + F E+  ++ + W A+I  ++ +    EAL+    MI   + PN V L  +L     +            V K  +Y + ++ + GL          +DM  + G +   ++       + +A+ W  L+S  + +  +E
Sbjct:  563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE--EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI----------GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNME 878          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.254e-76
Identity = 167/616 (27.11%), Postives = 306/616 (49.68%), Query Frame = 1
Query:  328 NPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPT--TFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIV-TSLMIMYSKCGVLDYSLKLFNGLEA-RNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQV--LKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGS-MTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154
            +P  +  ++       +  E +AI  + + +   V  T  T  S+L++   + +L  G  +HA     GL +N ++ + L  MY+ C  +E A +VF+     N   WNA++RG   +G      V+  F +M+S   N++++TF+++L + A +     G + H++++K     +  +   L+++Y KCG ++ A ++FE + +RD + W  +I  +  +  + EA +  + M   GI  +   L + L     V     G++VH   VK     + L   S LIDMY KCG ++  R+VF    E + +S  AL++GY S   LE+A+     M   G  P  +T AT++  C +  +L  G + H    K  F      +  SL+ MY     +  +  LF+ L + ++++ WT M+  ++++G   EA+  ++ M+     PD      +L +C  L +++ G+ IH  +  L  D + + S +  ++ MY  CG M  +  VFD +R + + ++W ++I  +  N   E A+ +F  M      P+  TF  VL+ C  AG V +  +IF +M  +Y ++   +H   M++LL   G  +EA+ FI+ ++L
Sbjct:  289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESH--KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC-GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNT--LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNL 898          

HSP 2 Score: 229.565 bits (584), Expect = 5.508e-62
Identity = 148/558 (26.52%), Postives = 248/558 (44.44%), Query Frame = 1
Query:  433 NPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNM 2106
            N  TFS +L++C R  ++  GRQIH  +   GLE N +    L  MY  C  I DA+RVF+     N   W  L  G V +G     + +  F  MR      +   F TV+ +                                   Y + GK+K A  +F E+   D++ W  +I+G      +  A+ Y   M    +      L ++L  IG V    +G  VHA  +K    +  + + S L+ MY KC  ME+  +VF    E+N + W A++ GY  NG   + +   + M+  G+  D  T  ++L  CA    L  G + H+  +K     N+ +  +L+ MY+KCG L+ + ++F  +  R+ ++W  +I SY +     EA  +F+ M L     D   +A  L  C  +  +  GK++H   +K   +      + ++ MY  CG++ +A+ VF ++     ++  A+I  +  N+L E A+ LF +M++ G  P+  TF  ++  C K   +    Q    +T++     S E   + I LL M
Sbjct:  159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE--EAVLVFERMRDEGHRPDHLAFVTVINT-----------------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL-GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR---GFSSEGEYLGISLLGM 674          

HSP 3 Score: 216.853 bits (551), Expect = 1.173e-57
Identity = 150/542 (27.68%), Postives = 258/542 (47.60%), Query Frame = 1
Query:  316 LHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFY-CSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEAR-NVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKK-DFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVK-GSMTWTAIIEA---HGYNDLCEGAIS 1920
            L  KN       I+ +A   +  + + +   +   G  ++  TF+SLL++C     L  G Q H+ I    L  N F+   L  MY  CG++EDA+++F+     +  +WN ++ GS V       +    F  M    +  +    ++ LK+        QG + H L VK G        + LI++Y KCG IK A +VF  +PE  ++   A+IAG++ N ++ EA+   + M++ G+ P+ +   TI+    +  +  +G + H  + K    S+   +   L+ MY     M     +F   S  ++ + WT +MSG+  NG  E+AL+    M+ +G  PD  T  TVL VC+ L +L  G  IH+         +     +L+ MY+KCG +  S ++F+ +  R NV+SW ++I  YA++G   +A+ +F SM+ S   PD +    +L  C     +  G++I   ++ +   E+     A MV + G  G +  A    +A  +K  +  W++++ A   HG  D   G IS
Sbjct:  388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTII-GSYVQDENES-EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHG--DDIRGEIS 924          

HSP 4 Score: 177.178 bits (448), Expect = 1.424e-44
Identity = 120/494 (24.29%), Postives = 225/494 (45.55%), Query Frame = 1
Query:  481 SLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQM-----ISDG 1947
            +L  G+ +H+     G+++   L   +  +Y  C  +  A++ FD     +  +WN++L  S+ S   +   VL +F  +    +  N++TFS VL + A  +    G + H  ++K G   +S     L+++Y KC +I  A RVFE I + + + W  + +G+    +  EA+     M  EG  P+ +   T+                                    I+ Y + G ++  R +F      + ++W  ++SG+   G    A+     M++   K    T+ +VL     +  L+ G+ +HA A+K     N+ + +SL+ MYSKC  ++ + K+F  LE +N + W AMI  YA +G   + + +F  M+ S +  D      +L+ C     +++G + H  ++KK       V   +V MY  CG + +A+ +F+ +  + ++TW  II ++  ++    A  LF +M     +SDG
Sbjct:   75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSML--SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV------------------------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529          

HSP 5 Score: 154.836 bits (390), Expect = 2.311e-37
Identity = 112/465 (24.09%), Postives = 199/465 (42.80%), Query Frame = 1
Query:  676 GRKRYLDVLSTFSEM--RSLAVNLNEYTFSTVLKSFAG-----ASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRK 2049
            GR+ Y  VL +  ++  R L + L +       K F       A A R G   H+  +  G  +   L   +++LY KC ++  A + F+ + E+D+  W ++++ ++      + L     +    I+PN    + +L         + G+++H  ++K     +       L+DMY KC  +   R+VF    + N + WT L SGY+  G  E+A+     M+ EG +PD +   TV+                                     Y + G L  +  LF  + + +V++W  MI  + + GC   AI  F +M+ S  +     +  +L+  G +  + LG  +H + +K    S   V + +V MY  C  M  A  VF+A+  K  + W A+I  + +N      + LF  M S G+  + FTF  +LS C  +  ++   Q  S++ +K
Sbjct:   30 GRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM-GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT-----------------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A0D2TVW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G266500 PE=4 SV=1)

HSP 1 Score: 1370.53 bits (3546), Expect = 0.000e+0
Identity = 679/689 (98.55%), Postives = 684/689 (99.27%), Query Frame = 1
Query:   97 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXX-XXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSARSPPKPPKKPTK   ++RRNPPSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALL+KYGFINSSMLRTGLI+LYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMY KCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAG VDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL+S
Sbjct:    1 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSARSPPKPPKKPTKFPRKRRRNPPSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLIKYGFINSSMLRTGLIDLYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYSKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGFVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLTS 689          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A061EEF5_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein OS=Theobroma cacao GN=TCM_018189 PE=4 SV=1)

HSP 1 Score: 1143.64 bits (2957), Expect = 0.000e+0
Identity = 558/682 (81.82%), Postives = 609/682 (89.30%), Query Frame = 1
Query:  115 QSHSLPFSLQPSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXXXXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            QS SL F L    PNP F +  QF RI+ SARSPPKP + PT F  +R  P   PFF+K     SLPLH+KNP AIYKDIQ FARQNKLKEALAILDYVDQQGIPVNPTTFSSLLA+CVR KSL  GRQIH+HIRTNGLENNEFLRAKLAHMYTSCGSI+DA RVFDECTS N +SWNALLRG+V+SG+KRYLDVLST+SEMR LAV LN YTFS VLKSFAGASAFRQGLK HALL+K GFI+SSMLRTGLI+ YFKCGKIKLA RV EEIPERDI+LWGA+IAGFAHNRMQ+EAL+Y RWMIS GIYPNSVILTTILPVIGEVWARK+G+E+HAYVVKTKSYSKQL IQSGL+DMYCKCGDM+SGR+VFYCS ERNAISWTALMSGY+SNGRL QALRSVVWMQQEGFKPDVVTVAT+LPVCA+LRAL+HG EIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNG+EARNVISWTAMIESY +SG L EA+ VFRSMQ SKHRPDSV MARMLN+C EL+A+KLGKEIHGQVLKKDFESIP VSA +VKMYG+CGL+S AKLVF+AV VKG+MTWTAIIEA+GYNDLCE AISLFHQM SD F PNHFTFKVVLS+CR+AG VD ACQ+FS+MTRKY++K SEEHY I+IELLN  GRFEEAERF+QM SLSS
Sbjct:    5 QSSSLSFCLHSFPPNPFFCRNNQFSRIKASARSPPKPQRNPTIFAHRRSPP---PFFEKNAFPSSLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLAACVRSKSLADGRQIHSHIRTNGLENNEFLRAKLAHMYTSCGSIDDALRVFDECTSKNVHSWNALLRGTVISGKKRYLDVLSTYSEMRLLAVKLNVYTFSAVLKSFAGASAFRQGLKTHALLIKNGFIDSSMLRTGLIDFYFKCGKIKLACRVLEEIPERDIVLWGAMIAGFAHNRMQKEALSYVRWMISAGIYPNSVILTTILPVIGEVWARKLGREIHAYVVKTKSYSKQLVIQSGLVDMYCKCGDMDSGRRVFYCSRERNAISWTALMSGYVSNGRLNQALRSVVWMQQEGFKPDVVTVATILPVCAELRALSHGKEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGMEARNVISWTAMIESYVKSGHLHEALSVFRSMQFSKHRPDSVAMARMLNVCSELRAVKLGKEIHGQVLKKDFESIPFVSAGIVKMYGSCGLISTAKLVFEAVPVKGTMTWTAIIEAYGYNDLCEDAISLFHQMASDDFIPNHFTFKVVLSVCRQAGFVDRACQLFSLMTRKYELKASEEHYSIIIELLNTFGRFEEAERFVQMSSLSS 683          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: F6HN33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05930 PE=4 SV=1)

HSP 1 Score: 986.097 bits (2548), Expect = 0.000e+0
Identity = 459/617 (74.39%), Postives = 532/617 (86.22%), Query Frame = 1
Query:  307 SLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLS 2157
            SLPLH+KNP AI+ DIQ FARQ KLKEAL ILDY DQQGIPVNPTTFSSLL +CV  KSLTHG+QIH HIR NGLENNEFLR KL HMYTSCGS+EDA+ VFD  +S + Y+WNALLRG+V+SGR+ Y + LST+SEMR L V LN Y+FS ++KSFAGA+AFRQGLKAHALL+K G ++SS+LRT LI++YFKCGKIKLA  +FEEI ERD+++WGA+IAGF HNR+QREAL Y RWM  EGI PNSVI+TTILPVIGEV A K+G+EVHAYVVKTKSYSKQ+ IQS LIDMYCKCGDM SGRQVFY S ERNA+SWTALMSGY+SNGRL+QALRS+ WMQQEGF+PDVVTVATVLPVCA+LRAL  G EIH+YAVKN F PNVSI TSLM+MYSKCG LDYS KLF+G++ARNVISWTAMI+SY E+GCL EA+GVFRSMQLSKHRPDSV MAR+L+ICGEL+ +KLGKEIHGQ+LKKDFESIP VSAE++KMYG  G +S AKL F A+  KGSM WTAIIEA+GYNDL + AI+LFHQM SDGF PNH+TFK VLSIC +A L D+AC IF++M+R+Y++K S EHY  +IELLN  GR E+A+RFIQM+S S
Sbjct:    2 SLPLHTKNPHAIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICERAELADDACLIFNLMSRRYRIKASNEHYSSIIELLNRVGRTEDAQRFIQMRSAS 618          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A067LLI4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17232 PE=4 SV=1)

HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0
Identity = 455/617 (73.74%), Postives = 535/617 (86.71%), Query Frame = 1
Query:  307 SLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNN--AYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151
            SLPLHSKNP AI +DIQ FAR+NKLKEAL I+DY+DQQGIPVN TTFSSL+A+C+R KSL   +QIH  IR NG ENNEFLR KL HMYT+CGS++DAQ+VFDEC+S++   Y WNALLRG+VVSG KRYLDVLST++ MR L V LN Y+FS V+KSFAGASA RQGLKAHA+LVK G I+SS+LRT LI++YFKCGKIKLAH+VFEE  +RDI+ WGA+I+GFAHNR Q EAL+Y RWM+SEG+YPNSVI+TTIL VIG+ WARK+G+E+H YVVKTKSYSKQL+IQSGLIDMYCKCGDM S R+VFY S ERNAISWTALMSGY SNGRLEQALRSV WMQQEGF+PDVVTVAT++PVC++L+ALNHG EIHAYAVKN FFPNVS+ TSLM MYSKCGVLDYS+KLFN +E+RNVISWTA+I+SYAE+GC+ EA+ VFRSMQLSKHRPDSVVM+RML+IC E+KA+KLGKEIHG  +KKDFESIP VSA++VKMYG  GL+ NAK +F A+ VKGSM WTAIIEA+GYN+L + AI LFH+MIS GFTP HFTFKVVLSIC +AG  D+AC+IF +M+R+YK+K SEEH  I+  LL  +GR +EAERF +M S
Sbjct:   70 SLPLHSKNPGAICEDIQKFARENKLKEALTIMDYLDQQGIPVNVTTFSSLIAACIRSKSLDQAKQIHVFIRINGFENNEFLRTKLVHMYTACGSLKDAQQVFDECSSSSSSVYPWNALLRGTVVSGSKRYLDVLSTYTTMRELGVELNVYSFSNVIKSFAGASALRQGLKAHAVLVKNGLIDSSILRTSLIDMYFKCGKIKLAHKVFEETLDRDIVFWGAMISGFAHNRRQWEALDYFRWMVSEGMYPNSVIVTTILNVIGDKWARKLGKEIHGYVVKTKSYSKQLTIQSGLIDMYCKCGDMGSSRRVFYGSMERNAISWTALMSGYASNGRLEQALRSVSWMQQEGFRPDVVTVATIVPVCSELKALNHGKEIHAYAVKNLFFPNVSVTTSLMKMYSKCGVLDYSVKLFNNMESRNVISWTAIIDSYAENGCINEAMNVFRSMQLSKHRPDSVVMSRMLSICAEIKAVKLGKEIHGHAIKKDFESIPFVSADLVKMYGRSGLIDNAKSIFHAIPVKGSMAWTAIIEAYGYNNLWQEAIYLFHEMISGGFTPTHFTFKVVLSICDQAGFADDACRIFELMSRRYKIKASEEHCSIIAGLLTRAGRTQEAERFTKMSS 686          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: B9IQB5_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0019s10410g PE=4 SV=2)

HSP 1 Score: 955.666 bits (2469), Expect = 0.000e+0
Identity = 455/685 (66.42%), Postives = 554/685 (80.88%), Query Frame = 1
Query:  115 QSHSLPFSLQ--PSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXXXXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSN-NAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            QS SL   L   P +P  +    +QF +I+ S ++ P   + P K  ++     + P         SLPLH KNPQAIYKDIQ F+R+N+LK+AL I+DY+DQQGIPVNPTTFS+L+A+C+R KSLT  ++IH H+R NGL+NNEFLR KL HMYTSCGSIEDA+ VFDECTS    Y WNAL+RG+V+SG+KRY DVLS + EMR   V LNEYTFS V+KSFAGASA +QG K HA+++K G I+S++LRT LI++YFKCGK +LAH VFEE+ ERDI+ WGA+IAGFAHNR Q EAL+Y RWM+SEG+YPNSVI+T+ILPVIGEVWAR++GQEVH YV+K K YS++LSIQSGLIDMYCKCGDM SGR+VFY S ERN +SWTALMSGY+SNGRLEQALRSVVWMQQEG +PDVVTVATV+PVCA+L+ L HG EIHA++VK  F PNVS+ TSL+ MYSKCGVLDYS+KLF+G+EARNVI+WTAMI+SY E+GC+ EA  VFR MQ SKHRPDSV MARML+IC ++K +K GKEIHG +LKKDFESIP VS+E+VKMYG+CGL+ +A+ VF+AV VKGSMTWTAIIEA+GYN L + AI LF +M S  FTPN FTFKVVLSIC +AG  D+AC+IF +M+++YKVK+S EHY I+I LLN SGR   A+RFI M +L S
Sbjct:    2 QSPSLSLHLHCFPQNPLNINITHRQFSKIKSSTQTQPVQTQNPNKKHQQFDERDAFP--------ASLPLHKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSALIAACIRSKSLTKAKEIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECTSTATVYPWNALIRGTVISGKKRYGDVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMISSAVLRTCLIDMYFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRRQWEALDYVRWMVSEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCGDMGSGRRVFYGSRERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPNVSLTTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCINEAFNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPFVSSELVKMYGSCGLVHSAESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTPNDFTFKVVLSICDEAGFADDACRIFELMSKRYKVKISGEHYAIIIGLLNRSGRTRAAQRFIDMSNLLS 678          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A067E989_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047571mg PE=4 SV=1)

HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0
Identity = 455/685 (66.42%), Postives = 547/685 (79.85%), Query Frame = 1
Query:   97 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXXXXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151
            ME  Q  + SL   +    PNP+     QF +++ SA  P     +  K    +++     F    PSS  LPLH KNP+AIYKDIQ FARQNKLKEAL ILDY+DQQGIPVN TTF++L+ +CVR +SL  GR IH HIR NGLENN FLR KL  MYTSCGS EDA++VFDE +S + Y WNALLRG+V++G+KRY  VL  + +MR L V LN YTFS V+KSFAGASA  QGLK HALL+K GF++  +LRT LI++YFKCGKIKLA RVF+E  +RDI++WG++IAGFAHNR++ EAL+ ARWMI EGIYPNSV+LT +LPVIGE WARK+GQEVHAYV+K + YS++L ++S L+DMYCKC DM S  +VFY + ERN I WTALMSGY+SNGRLEQALRS+ WMQQEGF+PDVVTVATV+PVC+QL+ALNHG EIHAYAVKN F PNVSI+TSLMIMYSKCGVLDYSLKLF+ +E RNVISWTAMI+S  E+G L +A+GVFRSMQLSKHRPDSV MARML++ G+LKA+KLGKEIHGQVLKKDF S+P V+AE +KMYG CG +  AKLVFDAV VKGS+TWTAIIEA+GYNDLC+ A+SLF +M + GFTPNHFTFKV+LSIC +AG  DEAC+IF+VM+R YK++  EEHY IMI++L   GR EEA RF +M S
Sbjct:    1 MESTQALAVSLSLCVHSFPPNPI-SNNHQFFKLKASATKPESTYFQKRKKYHTKKSAEKDAF----PSS--LPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFREMSS 678          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A0A0KXW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649310 PE=4 SV=1)

HSP 1 Score: 933.324 bits (2411), Expect = 0.000e+0
Identity = 429/626 (68.53%), Postives = 525/626 (83.87%), Query Frame = 1
Query:  277 PFFQKAPSSPS-LPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151
            P F +  + PS LPLH+KNP AIY+D+Q FARQNKLKEAL I+DYVDQQGIPVN TTFSSL+ +CVR KS+T+ +QIHAHIR NGLENNEF+R +L HMYT+CGS+E+AQ++FDE +S + Y WNALLRG+V++GR+ Y  +LST++EMR L V LN Y+F+ ++KSFAGASAF QGLKAH LL+K G I SS+L T L+++YFKCGKIKLA ++F EI ERD+++WG++IAGFAHNR+QREAL Y R MI +GI PNSVILTTILPVIGE+WAR++GQEVHAYV+KTKSYSKQ+ IQS LIDMYCKCGD+ SGR VFY S ERNAI WTALMSGY  NGRLEQA+RSV+WMQQEGF+PD+VTVAT+LPVCAQLRAL  G EIHAYA+KNCF PNVSIV+SLM+MYSKCGV+DY+LKLFNG+E RNVI WTAMI+SY E+ C  EAI +FR+MQLSKHRPD+V M+R+L IC E K +K+GKEIHGQVLK+ FE +  VSAE+VK+YG CG +  AK+VF+A+ VKG MTWTAIIEA+G +   + AI LF +M S G +PNHFTFKVVLSIC++AG VDEA +IF +M+ +YK+K SEEHY ++I +L   GR EEA R++QM S
Sbjct:   60 PTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRLEEARRYVQMLS 685          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: W9T1A9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001633 PE=4 SV=1)

HSP 1 Score: 921.383 bits (2380), Expect = 0.000e+0
Identity = 429/626 (68.53%), Postives = 519/626 (82.91%), Query Frame = 1
Query:  277 PFFQKAPSSP-SLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151
            P F K  + P SLPLHSKNP+A+Y DIQ FARQNKL +AL ILDY+DQQGIPVNPTTF++L+A+CVR KSL HG+Q+HA IR NGL+ NEFLR KL HMYTSCGS++DA  +FDE  S + Y WNALLRG+V+SG +RY D LST+ +MR+L + +N Y+FS+V+KS AGASA  QGLK HALL+K G + S+MLRT LI++YFKCGKIKLA +VFEEI ERDI+ WGA+I+GFAHNR+Q +AL+Y R M+ EGI  NSVILT ILPVIGE+ ARK+G+EVHAY VKTK Y+KQ  IQSGLIDMYCKCGDME+GR+VFY   ERNAI WTAL+SGY++NGRLEQALRS++WMQQEG +PDVVTVATV+P+CA+LRAL  G EIHAYAVKNCF PNVSIV+SLM+MYSKCGVLDYS++LF G+E RNVI WTAMI+SY E+  L EA+ V RSM LSKHRPDSV + RML IC ELK++K GKEIHGQVLK++FES+  VSAE+VKMYG CG++ +AKLVFD +RVKGSMTWTAIIEA+  N L E AI LF++M   GFTPN+FTF+V LSIC +AG VD+AC+IF++MTR Y VK SEE Y ++I LL   GR E A+R++Q+ S
Sbjct:   19 PVFTKKDAFPESLPLHSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIPVNPTTFAALIAACVRTKSLDHGKQVHAFIRINGLDKNEFLRTKLVHMYTSCGSVDDANNLFDESPSRSVYPWNALLRGNVISGGRRYRDALSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLKTHALLIKNGLVGSAMLRTSLIDMYFKCGKIKLARQVFEEIVERDIVAWGAMISGFAHNRLQWQALDYTRRMVDEGIKLNSVILTIILPVIGELLARKLGREVHAYAVKTKRYAKQTFIQSGLIDMYCKCGDMENGRRVFYRLKERNAICWTALISGYVANGRLEQALRSIIWMQQEGIRPDVVTVATVVPICAELRALKPGKEIHAYAVKNCFLPNVSIVSSLMMMYSKCGVLDYSVRLFEGMEQRNVILWTAMIDSYVENRHLDEALSVIRSMVLSKHRPDSVAIGRMLCICNELKSLKFGKEIHGQVLKRNFESVHFVSAEIVKMYGRCGVIDDAKLVFDTIRVKGSMTWTAIIEAYRDNGLYEDAIDLFYEMRDKGFTPNNFTFQVALSICNEAGFVDDACRIFNLMTRSYNVKASEEQYSLIIGLLTRFGRVEAAQRYMQLSS 644          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: K7LFV1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0
Identity = 410/626 (65.50%), Postives = 516/626 (82.43%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154
            PF +K     SLPLH+KNP  I+KDI+ FARQNKLKEAL ILDYVDQ+GIPV+ TTFSS++A+C+R KSL  GR++H HIR NGLENN FLR KL HMYT+CGS+EDAQ++FD     + Y WNALLRG+VVSG+++Y+DVL T++EMR+L V LN Y+FS V+KSFAGA AF QGLK H LL+K G +++ +LRT LI++YFKCGK++LA RVFEEIPERD+++WGA++AGFAHNR+QRE L Y RWM+ EG+ PNSV++T ++PVIGEV AR++GQE HAYVVKTKSYSK + +QS LIDMYCKCGDM S R+VFY S ERN + WTALMSGY +NG+LEQALRS +WMQQEGF+PDVVT+ATVLPVCAQLRAL  G +IHAYA+K+ F PNVS+ +SLM MYSKCGV++YS +LF+ +E RNVISWTAMI+SY E+G L EA+GV RSMQLSKHRPDSV + RML++CGE K +KLGKEIHGQ+LK+DF S+  VSAE++ MYG  G ++ A LVF+AV VKGSMTWTA+I A+GYN+L + A++LF QM    ++PNHFTF+ +LSIC KAG VD+AC+IF+ M R YK++ S+EH+ IM+ LL  +G+ E+A+RF QM S 
Sbjct:   60 PFTEKDAFPSSLPLHNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQM---RYSPNHFTFEAILSICDKAGFVDDACRIFNSMPR-YKIEASKEHFAIMVRLLTHNGQLEKAQRFEQMSSF 681          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A0B2PR53_GLYSO (Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja GN=glysoja_006003 PE=4 SV=1)

HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0
Identity = 410/626 (65.50%), Postives = 516/626 (82.43%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154
            PF +K     SLPLH+KNP  I+KDI+ FARQNKLKEAL ILDYVDQ+GIPV+ TTFSS++A+C+R KSL  GR++H HIR NGLENN FLR KL HMYT+CGS+EDAQ++FD     + Y WNALLRG+VVSG+++Y+DVL T++EMR+L V LN Y+FS V+KSFAGA AF QGLK H LL+K G +++ +LRT LI++YFKCGK++LA RVFEEIPERD+++WGA++AGFAHNR+QRE L Y RWM+ EG+ PNSV++T ++PVIGEV AR++GQE HAYVVKTKSYSK + +QS LIDMYCKCGDM S R+VFY S ERN + WTALMSGY +NG+LEQALRS +WMQQEGF+PDVVT+ATVLPVCAQLRAL  G +IHAYA+K+ F PNVS+ +SLM MYSKCGV++YS +LF+ +E RNVISWTAMI+SY E+G L EA+GV RSMQLSKHRPDSV + RML++CGE K +KLGKEIHGQ+LK+DF S+  VSAE++ MYG  G ++ A LVF+AV VKGSMTWTA+I A+GYN+L + A++LF QM    ++PNHFTF+ +LSIC KAG VD+AC+IF+ M R YK++ S+EH+ IM+ LL  +G+ E+A+RF QM S 
Sbjct:   60 PFTEKDAFPSSLPLHNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQM---RYSPNHFTFEAILSICDKAGFVDDACRIFNSMPR-YKIEASKEHFAIMVRLLTHNGQLEKAQRFEQMSSF 681          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
PP357_ARATH5.265e-7828.25Pentatricopeptide repeat-containing protein At4g39... [more]
PPR45_ARATH8.058e-7829.37Pentatricopeptide repeat-containing protein At1g15... [more]
PP237_ARATH2.542e-7729.22Pentatricopeptide repeat-containing protein At3g16... [more]
PP307_ARATH1.111e-7627.55Pentatricopeptide repeat-containing protein At4g13... [more]
PP220_ARATH1.254e-7627.11Pentatricopeptide repeat-containing protein At3g09... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2TVW1_GOSRA0.000e+098.55Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061EEF5_THECC0.000e+081.82Pentatricopeptide repeat (PPR-like) superfamily pr... [more]
F6HN33_VITVI0.000e+074.39Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067LLI4_JATCU0.000e+073.74Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
B9IQB5_POPTR0.000e+066.42Pentatricopeptide repeat-containing family protein... [more]
A0A067E989_CITSI0.000e+066.42Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A0A0KXW0_CUCSA0.000e+068.53Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
W9T1A9_9ROSA0.000e+068.53Uncharacterized protein OS=Morus notabilis GN=L484... [more]
K7LFV1_SOYBN0.000e+065.50Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2PR53_GLYSO0.000e+065.50Pentatricopeptide repeat-containing protein, chlor... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 491..517
e-value: 4.7E-5
score: 23.2
coord: 261..287
e-value: 0.18
score: 12.0
coord: 364..382
e-value: 0.19
score: 11.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 491..525
e-value: 4.2E-6
score: 24.6
coord: 390..424
e-value: 0.0016
score: 16.5
coord: 593..625
e-value: 3.1E-5
score: 21.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 590..636
e-value: 1.2E-7
score: 31.7
coord: 388..434
e-value: 4.5E-9
score: 36.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 625..655
score: 8.298
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 357..387
score: 5.623
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..422
score: 11.444
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 590..624
score: 9.328
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 117..151
score: 7.651
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 524..558
score: 5.842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 9.131
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 152..182
score: 5.875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 183..219
score: 7.399
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..523
score: 10.687
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 6.599
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..285
score: 6.796
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 423..457
score: 5.842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 458..488
score: 6.193
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 661..692
score: 6.204
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 82..116
score: 6.566
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 157..184
e-value: 1.2E-4
score: 20.3
coord: 461..514
e-value: 1.2E-4
score: 20.3
coord: 76..124
e-value: 1.2E-4
score: 20.3
coord: 387..405
e-value: 1.2E-4
score: 20.3
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 58..84
coord: 459..687
NoneNo IPR availablePANTHERPTHR24015:SF755SUBFAMILY NOT NAMEDcoord: 139..423
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 139..423
NoneNo IPR availablePANTHERPTHR24015:SF755SUBFAMILY NOT NAMEDcoord: 58..84
coord: 459..687

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097647 ID=g.barbadense_cottongen_reftransV1_0097647; Name=g.barbadense_cottongen_reftransV1_0097647; organism=Gossypium barbadense; type=contig; length=2334bp
TGAAAATATAATTAAAAGGATAAATGAATTATTCGAAATGAAGTTAGAAA
ACTTGGGGCTCTTAGTCTCCTCCACTCCAGCACTCTGAAAGAAGCCATGG
AAATCATCCAATTCCAATCACACTCCCTTCCATTCAGTCTTCAGCCTTCT
TCTCCAAATCCTCTCTTTTATAAAACAAAGCAATTCTGCAGAATCCAAGG
CTCCGCAAGATCCCCACCCAAACCTCCCAAAAAACCAACAAAATTTCCCC
GCAAAAGAAGGAACCCGCCTTCATTGCCCTTCTTTCAGAAAGCTCCATCT
TCCCCCTCTTTACCTCTCCACTCCAAGAACCCACAGGCCATTTACAAAGA
CATTCAAGCATTCGCTAGACAAAACAAGCTCAAAGAAGCCCTCGCTATTT
TAGACTACGTTGATCAACAAGGCATCCCTGTAAATCCCACCACCTTCTCT
TCCCTCCTTGCTTCTTGCGTTCGTTTAAAATCCTTAACCCATGGAAGGCA
AATCCACGCTCATATTCGGACCAATGGTCTCGAAAACAACGAGTTCCTAC
GTGCCAAACTTGCCCATATGTACACTTCGTGTGGTTCCATTGAAGATGCC
CAAAGGGTGTTCGATGAATGTACTAGCAACAACGCTTATTCCTGGAATGC
TTTGCTTAGAGGTAGTGTTGTATCGGGTAGAAAACGGTATTTGGATGTGC
TTTCTACGTTTTCCGAAATGAGGTCATTGGCGGTAAATTTGAACGAGTAC
ACTTTCTCTACTGTTCTTAAGAGCTTCGCCGGTGCATCAGCATTTAGACA
AGGTTTAAAGGCTCATGCCCTTTTGGTTAAATACGGTTTCATTAATAGTT
CTATGCTTAGGACTGGTTTGATCGAATTATATTTTAAATGCGGAAAGATT
AAGCTCGCTCACCGCGTGTTTGAGGAAATCCCTGAGAGAGATATTATTTT
GTGGGGGGCGGTGATTGCTGGTTTTGCACATAATAGGATGCAAAGGGAAG
CTTTGAATTATGCTAGATGGATGATAAGTGAAGGTATATATCCCAATTCT
GTTATACTCACTACGATACTTCCAGTGATTGGGGAAGTTTGGGCTCGGAA
AGTAGGCCAGGAGGTCCATGCTTATGTGGTTAAGACGAAGAGTTACTCGA
AGCAGTTGTCTATTCAGTCTGGCTTAATTGATATGTACTGCAAGTGTGGT
GATATGGAATCGGGCAGGCAAGTTTTCTATTGTTCTGGAGAAAGGAATGC
GATTTCTTGGACCGCTTTGATGTCGGGATACATATCGAATGGGAGGCTTG
AGCAGGCTTTGAGATCGGTTGTATGGATGCAGCAGGAAGGGTTTAAGCCC
GATGTTGTCACGGTTGCCACAGTTCTTCCTGTTTGTGCCCAATTGAGGGC
TCTCAATCATGGGATGGAGATTCATGCGTATGCTGTAAAGAATTGTTTCT
TTCCCAATGTATCTATTGTTACTTCCCTGATGATTATGTACTCAAAGTGT
GGTGTTTTAGATTATTCTTTGAAGTTGTTTAATGGTTTAGAGGCAAGGAA
TGTAATTTCATGGACGGCCATGATTGAGTCATATGCAGAGAGTGGATGTT
TACCTGAAGCAATCGGTGTGTTTAGGTCAATGCAGTTGTCGAAACACAGG
CCGGACTCAGTGGTAATGGCAAGGATGTTGAACATTTGCGGTGAGCTTAA
AGCTATAAAGCTTGGGAAGGAGATTCATGGACAAGTCTTGAAGAAAGATT
TCGAGTCGATTCCTTCCGTTTCAGCAGAGATGGTTAAGATGTACGGTGCT
TGTGGGTTAATGAGCAATGCAAAGTTAGTATTTGATGCAGTCCGCGTTAA
GGGTTCTATGACATGGACTGCCATTATAGAGGCTCATGGATATAATGATC
TTTGTGAAGGGGCAATCAGTCTTTTTCATCAAATGATATCTGATGGTTTC
ACTCCAAACCATTTCACTTTCAAAGTGGTATTATCGATTTGCAGAAAGGC
TGGATTAGTTGATGAGGCTTGCCAAATATTCAGTGTAATGACTCGTAAAT
ATAAAGTCAAGGTATCCGAAGAGCATTATTGTATTATGATCGAGCTTCTT
AATATGTCTGGTCGCTTTGAGGAGGCTGAAAGATTCATCCAGATGAAATC
TCTATCATCTTAAGATAAAAAAAAACAGCCTTGTCAAGTTTTAGTTTCAA
TTACACCTCACAATTTGGAGAGTCAGATTAATCTTGATCAAGTCAATTCA
GTTTTCGTATGATTTTAAATTTATTCTAAGCTCGAGTTATTGTTTTTTAT
CGTCAAATTGATTGGATTGGATGTGAGTTTTCGG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_rpt
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding