g.barbadense_cottongen_reftransV1_0097647, g.barbadense_cottongen_reftransV1_0097647 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097647
Unique Nameg.barbadense_cottongen_reftransV1_0097647
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2334
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
At05chromosomeg.barbadense_cottongen_reftransV1_0097647:1..2323 .
At05:21935774..21938100 +
n/a
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP430_ARATH (Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.892e-81
Identity = 167/605 (27.60%), Postives = 304/605 (50.25%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAF---RQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDME-SGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154
            I AF +  +   AL++ + +   G   N  TFSS++ SC  L+ +++G ++H  +   G E N  + + L+ +Y+ CG  ++A  +F    + +  SW  ++  S + G +++ + L  +SEM    V  NE+TF  +L    GAS+F     G   H+ ++  G   + +L+T L++ Y +  K++ A RV     E+D+ LW +V++GF  N   +EA+     M S G+ PN+   + IL +   V +   G+++H+  +K   +     + + L+DMY KC   E    +VF      N +SWT L+ G + +G ++     ++ M +   +P+VVT++ VL  C++LR +   +EIHAY ++      + +  SL+  Y+    +DY+  +   ++ R+ I++T+++  + E G    A+ V   M     R D + +   ++    L A++ GK +H   +K  F    SV   +V MY  CG + +AK VF+ +     ++W  ++     N     A+S F +M      P+  TF ++LS C    L D   + F VM + Y ++   EHY  ++ +L  +GR EEA   ++   L
Sbjct:   96 ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI--SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL----GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHL 693          

HSP 2 Score: 221.861 bits (564), Expect = 1.012e-59
Identity = 136/532 (25.56%), Postives = 267/532 (50.19%), Query Frame = 1
Query:  445 FSSLLASCVRLKSLTH------GRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDY-SLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLC--EGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVD 2013
              +L  SC+R+ S         G  IH  +   GL  N  L   L  +Y     I +A+++FDE +    ++W  ++  S  +  + +   LS F EM +   + NE+TFS+V++S AG      G + H  ++K GF  +S++ + L +LY KCG+ K A  +F  +   D I W  +I+     R  REAL +   M+  G+ PN      +L         + G+ +H+ ++  +     + +++ L+D Y +   ME   +V   SGE++   WT+++SG++ N R ++A+ + + M+  G +P+  T + +L +C+ +R+L+ G +IH+  +K  F  +  +  +L+ MY KC   +  + ++F  + + NV+SWT +I    + G + +  G+   M   +  P+ V ++ +L  C +L+ ++   EIH  +L++  +    V   +V  Y +   +  A  V  +++ + ++T+T+++    +N+L   E A+S+ + M  DG   +  +    +S     G ++
Sbjct:   20 LGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMI--SAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNII-VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR--FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALE 545          

HSP 3 Score: 218.779 bits (556), Expect = 1.330e-58
Identity = 160/644 (24.84%), Postives = 296/644 (45.96%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKL-AHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLV----DEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS*DKKKQPCQVLVSITPHNLESQ--INLDQVNSVF 2256
            I +     K +EAL     + + G+P N  TF  LL +   L  L  G+ IH++I   G+  N  L+  L   Y+    +EDA RV +     + + W +++ G V + R +  + + TF EMRSL +  N +T+S +L   +   +   G + H+  +K GF +S+ +   L+++Y KC   ++ A RVF  +   +++ W  +I G   +   ++       M+   + PN V L+ +L    ++   +   E+HAY+++ +    ++ + + L+D Y     ++    V      R+ I++T+L++ +   G+ E AL  + +M  +G + D +++   +   A L AL  G  +H Y+VK+ F    S++ SL+ MYSKCG L+ + K+F  +   +V+SW  ++   A +G +  A+  F  M++ +  PDSV    +L+ C   +   LG E + QV+KK +   P V     +V + G  G +  A  V + + +K                                  PN   FK +L  CR  G +    D A +  ++      +      Y ++ +L + SG+ E A++   + +     KK     V V    H+  S+    +D+ N ++
Sbjct:  197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAK--EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR-RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE-YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLK----------------------------------PNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPAL------YILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIY 795          

HSP 4 Score: 171.4 bits (433), Expect = 6.603e-43
Identity = 113/431 (26.22%), Postives = 204/431 (47.33%), Query Frame = 1
Query:  772 SFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMS-NAKLVFDAVRVKGSMTWTAIIEA---HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKY 2052
            SF  +++ R GL  H  ++K+G + +  L   L+ LY K   I  A ++F+E+  R +  W  +I+ F  ++    AL+    M++ G +PN    ++++     +     G  VH  V+KT  +     + S L D+Y KCG  +   ++F      + ISWT ++S  +   +  +AL+    M + G  P+  T   +L   + L  L  G  IH+  +      NV + TSL+  YS+   ++ ++++ N    ++V  WT+++  +  +    EA+G F  M+    +P++   + +L++C  ++++  GK+IH Q +K  FE    V   +V MY  C      A  VF A+     ++WT +I     HG+   C G   L  +M+     PN  T   VL  C K   V    +I + + R++
Sbjct:   32 SFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT-GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFG---LLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 2.325e-81
Identity = 176/600 (29.33%), Postives = 316/600 (52.67%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSN-NAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSM-LRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQM 2145
            I A+    +   ALA+   +  +G+P+  ++F +LL +C +L+ +  G ++H+ +   G  +  F+   L  MY     +  A+R+FD      +A  WN++L     SG+   L+ L  F EM       N YT  + L +  G S  + G + HA ++K    +S + +   LI +Y +CGK+  A R+  ++   D++ W ++I G+  N M +EAL +   MI+ G   + V +T+I+   G +     G E+HAYV+K   +   L + + LIDMY KC       + F    +++ ISWT +++GY  N    +AL     + ++  + D + + ++L   + L+++    EIH + ++      V I   L+ +Y KC  + Y+ ++F  ++ ++V+SWT+MI S A +G   EA+ +FR M  +    DSV +  +L+    L A+  G+EIH  +L+K F    S++  +V MY  CG + +AK VFD +  KG + +T++I A+G +   + A+ LF +M  +  +P+H +F  +L  C  AGL+DE      +M  +Y+++   EHY  ++++L  +    EA  F++M
Sbjct:  154 IGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS--LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749          

HSP 2 Score: 277.715 bits (709), Expect = 1.566e-78
Identity = 169/573 (29.49%), Postives = 295/573 (51.48%), Query Frame = 1
Query:  271 SLPFFQKAPSSPSLPLHSKNP--------QAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHI-RTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPER-DIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPN 1959
            S P  +   S P+ P   +NP        Q     +  F     L EA   LD V +   PV    F+ +L  C + ++++ GRQ+H+ I +T      +FL  KL  MY  CGS++DA++VFDE     A++WN ++   V +G       L+ +  MR   V L   +F  +LK+ A     R G + H+LLVK G+ ++  +   L+ +Y K   +  A R+F+   E+ D +LW ++++ ++ +    E L   R M   G  PNS  + + L         K+G+E+HA V+K+ ++S +L + + LI MY +CG M    ++       + ++W +L+ GY+ N   ++AL     M   G K D V++ +++    +L  L  GME+HAY +K+ +  N+ +  +L+ MYSKC +  Y  + F  +  +++ISWT +I  YA++ C  EA+ +FR +   +   D +++  +L     LK++ + KEIH  +L+K       +  E+V +YG C  M  A  VF++++ K  ++WT++I +   N     A+ LF +M+  G + +
Sbjct:   22 SFPRVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACF--DGVLTEAFQRLD-VSENNSPVE--AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEP--ASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586          

HSP 3 Score: 78.1814 bits (191), Expect = 1.838e-13
Identity = 55/254 (21.65%), Postives = 120/254 (47.24%), Query Frame = 1
Query:  310 LPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTIL 1071
            L +H K+  +    I  +A+ +   EAL +   V ++ + ++     S+L +   LKS+   ++IH HI   GL +   ++ +L  +Y  C ++  A RVF+     +  SW +++  S ++G +   + +  F  M    ++ +      +L + A  SA  +G + H  L++ GF     +   ++++Y  CG ++ A  VF+ I  + ++ + ++I  +  +   + A+     M  E + P+ +    +L
Sbjct:  445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES--EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 3.356e-81
Identity = 165/565 (29.20%), Postives = 289/565 (51.15%), Query Frame = 1
Query:  454 LLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSV--SAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            LL+ C  + SL   RQ H  +  NGL  +  +  KL  +Y   G  +DA+ VFD+    + Y W  +LR   ++  K  ++V+  +  +       ++  FS  LK+         G K H  LVK    ++ +L TGL+++Y KCG+IK AH+VF +I  R+++ W ++IAG+  N +  E L     M    +  N     T++    ++ A   G+  H  +VK+        + S L+DMY KCGD+ + R+VF      + + WTA++ GY  NG + +AL     M+    KP+ VT+A+VL  C  +  L  G  +H  ++K   + + ++  +L+ MY+KC     +  +F     +++++W ++I  ++++G + EA+ +F  M      P+ V +A + + C  L ++ +G  +H   +K  F +  SV     ++  Y  CG   +A+L+FD +  K ++TW+A+I  +G      G++ LF +M+     PN  TF  +LS C   G+V+E  + FS M + Y    S +HY  M+++L  +G  E+A   I+
Sbjct:   50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN--KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS-LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 606          

HSP 2 Score: 244.588 bits (623), Expect = 2.208e-68
Identity = 150/493 (30.43%), Postives = 247/493 (50.10%), Query Frame = 1
Query:  385 EALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFP--NVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVK 1851
            E + + D + + G   +   FS  L +C  L+ L +G++IH  +      +N  L   L  MY  CG I+ A +VF++ T  N   W +++ G V +      + L  F+ MR   V  NEYT+ T++ +    SA  QG   H  LVK G   SS L T L+++Y KCG I  A RVF E    D+++W A+I G+ HN    EAL+  + M    I PN V + ++L   G +   ++G+ VH   +K   +    ++ + L+ MY KC      + VF    E++ ++W +++SG+  NG + +AL     M  E   P+ VTVA++   CA L +L  G  +HAY+VK  F    +V + T+L+  Y+KCG    +  +F+ +E +N I+W+AMI  Y + G    ++ +F  M   + +P+      +L+ CG    +  GK+     + KD+   PS      MV M    G +  A  + + + ++
Sbjct:  125 EVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE--EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT--NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS-MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.498e-80
Identity = 164/585 (28.03%), Postives = 294/585 (50.26%), Query Frame = 1
Query:  430 VNPTTFSSLLA--SCVRLKSLTH---------GRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRG-SVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGI--YPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            ++P+TF + L   +   LK LTH         GR +H  I   G          L + Y  CG +  A  +F+     +  SWN+L+ G S   G      V+  F EMR+  +  N YT + + K+ +   +   G +AHAL+VK        + T L+ +Y K G ++   +VF  +PER+   W  +++G+A      EA+      + E      +  + T +L  +       +G+++H   +K       +++ + L+ MY KC  +    ++F  SG+RN+I+W+A+++GY  NG   +A++    M   G KP   T+  VL  C+ +  L  G ++H++ +K  F  ++   T+L+ MY+K G L  + K F+ L+ R+V  WT++I  Y ++    EA+ ++R M+ +   P+   MA +L  C  L  ++LGK++HG  +K  F     + + +  MY  CG + +  LVF     K  ++W A+I    +N   + A+ LF +M+++G  P+  TF  ++S C   G V+     F++M+ +  +    +HY  M++LL+ +G+ +EA+ FI+
Sbjct:    1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584          

HSP 2 Score: 215.698 bits (548), Expect = 4.374e-58
Identity = 151/566 (26.68%), Postives = 265/566 (46.82%), Query Frame = 1
Query:  418 QGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGR-KRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVK-GSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLN 2103
            Q I  N  T + +  +   L+S T GRQ HA +       + ++   L  MY   G +ED  +VF      N Y+W+ ++ G    GR +  + V + F   +    + ++Y F+ VL S A       G + H + +K G +    L   L+ +Y KC  +  A ++F+   +R+ I W A++ G++ N    EA+     M S GI P+   +  +L    ++   + G+++H++++K   + + L   + L+DMY K G +   R+ F C  ER+   WT+L+SGY+ N   E+AL     M+  G  P+  T+A+VL  C+ L  L  G ++H + +K+ F   V I ++L  MYSKCG L+    +F     ++V+SW AMI   + +G   EA+ +F  M      PD V    +++ C     ++ G   +  ++       P V   A MV +    G +  AK   ++  +  G   W  ++ A   +  CE  +    ++++ G +    T+  +  I    G + +  +++  M       VS+E  C  IEL N
Sbjct:  112 QDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG-SRESSTYVQLSGIYTALGRMRDVERVWKHMRAN---GVSKEVGCSWIELKN 670          

HSP 3 Score: 115.546 bits (288), Expect = 3.783e-25
Identity = 75/328 (22.87%), Postives = 147/328 (44.82%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGL----------IDMYCKCGDMESGRQVFYCSGERNAIS-WTALMSGYISNGRLE 1302
            +  +++  +  EA+ +   +   GI  +  T   +L +C  +  L  G+Q+H+ +   G E + F    L  MY   G + DA++ FD     +   W +L+ G V +      + L  +  M++  +  N+ T ++VLK+ +  +    G + H   +K+GF     + + L  +Y KCG ++  + VF   P +D++ W A+I+G +HN    EAL     M++EG+ P+ V    I+                 +V +   Y   +S Q GL          +D+  + G ++  ++    +   + +  W  L+S   ++G+ E
Sbjct:  294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNE--EALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH----------KGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCE 609          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP431_ARATH (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 2.763e-80
Identity = 174/587 (29.64%), Postives = 296/587 (50.43%), Query Frame = 1
Query:  394 AILDYVDQQGIPVNPTTF--SSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKK-DFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHG-YNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            A++ +V+     + P  F   ++  +C  LK    GR +H ++  +GLE+  F+ + LA MY  CG ++DA +VFDE    NA +WNAL+ G V +G+    + +  FS+MR   V     T ST L + A      +G ++HA+ +  G    ++L T L+  Y K G I+ A  VF+ + E+D++ W  +I+G+    +  +A+   + M  E +  + V L T++         K+G+EV  Y ++  S+   + + S ++DMY KCG +   ++VF  + E++ I W  L++ Y  +G   +ALR    MQ EG  P+V+T   ++     L  L +G               V     + +     G++             N+ISWT M+    ++GC  EAI   R MQ S  RP++  +   L+ C  L ++ +G+ IHG +++     S+ S+   +V MY  CG ++ A+ VF +          A+I A+  Y +L E AI+L+  +   G  P++ T   VLS C  AG +++A +IF+ +  K  +K   EHY +M++LL  +G  E+A R I+
Sbjct:  157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNE--EAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII-----LSLLRNG--------------QVDEAKDMFLQMQSSGIIP------------NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKE-AIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIE 708          

HSP 2 Score: 238.039 bits (606), Expect = 2.948e-65
Identity = 151/564 (26.77%), Postives = 269/564 (47.70%), Query Frame = 1
Query:  319 HSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNG--LENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALL----RGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992
            HS +  + +  + +  +  ++KEAL+++  +D + + + P  +  +L  CV  + L+ G+QIHA I  NG     NE++  KL   Y  C ++E A+ +F +    N +SW A++    R  +  G       L  F EM    +  + +    V K+       R G   H  +VK G  +   + + L ++Y KCG +  A +VF+EIP+R+ + W A++ G+  N    EA+     M  +G+ P  V ++T L     +   + G++ HA  +        + + + L++ YCK G +E    VF    E++ ++W  ++SGY+  G +E A+     M+ E  K D VT+AT++   A+   L  G E+  Y +++ F  ++ + +++M MY+KCG +  + K+F+    +++I W  ++ +YAESG   EA+ +F  MQL    P+  V+   L I   L+        +GQV           + +M     + G++ N             ++WT ++     N   E AI    +M   G  PN F+  V LS C
Sbjct:   31 HSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG------ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI-LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPN--VITWNLIILSLLR--------NGQV---------DEAKDMFLQMQSSGIIPNL------------ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556          

HSP 3 Score: 221.861 bits (564), Expect = 9.282e-60
Identity = 129/451 (28.60%), Postives = 238/451 (52.77%), Query Frame = 1
Query:  694 DVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYG--FINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVM 2040
            + LS  +EM    + +    +  +L+          G + HA ++K G  +  +  + T L+  Y KC  +++A  +F ++  R++  W A+I       +   AL     M+   I+P++ ++  +    G +   + G+ VH YVVK+      + + S L DMY KCG ++   +VF    +RNA++W ALM GY+ NG+ E+A+R    M+++G +P  VTV+T L   A +  +  G + HA A+ N    +  + TSL+  Y K G+++Y+  +F+ +  ++V++W  +I  Y + G + +AI + + M+L K + D V +A +++     + +KLGKE+    ++  FES   +++ ++ MY  CG + +AK VFD+   K  + W  ++ A+  + L   A+ LF+ M  +G  PN  T+ +++    + G VDEA  +F  M
Sbjct:   53 EALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502          

HSP 4 Score: 65.4698 bits (158), Expect = 1.560e-9
Identity = 41/151 (27.15%), Postives = 75/151 (49.67%), Query Frame = 1
Query: 1558 SWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKK-DFESIPS-VSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAG 2004
            S+   + S  ++G + EA+ +   M     R    +   +L  C   + +  GK+IH ++LK  DF +    +  ++V  Y  C  +  A+++F  +RV+   +W AII       LCEGA+  F +M+ +   P++F   VV ++C+  G
Sbjct:   37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNF---VVPNVCKACG 184          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.069e-79
Identity = 169/600 (28.17%), Postives = 305/600 (50.83%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGI---YPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            I+AF++     EAL     + +  +  +  TF S++ +C  L     G  ++  I   G E++ F+   L  MY+  G +  A++VFDE    +  SWN+L+ G   S    Y + L  + E+++  +  + +T S+VL +F      +QG   H   +K G  +  ++  GL+ +Y K  +   A RVF+E+  RD + +  +I G+    M  E++     M  E +    P+ + ++++L   G +    + + ++ Y++K   +  + ++++ LID+Y KCGDM + R VF     ++ +SW +++SGYI +G L +A++    M     + D +T   ++ V  +L  L  G  +H+  +K+    ++S+  +L+ MY+KCG +  SLK+F+ +   + ++W  +I +    G     + V   M+ S+  PD       L +C  L A +LGKEIH  +L+  +ES   +   +++MY  CG + N+  VF+ +  +  +TWT +I A+G     E A+  F  M   G  P+   F  ++  C  +GLVDE    F  M   YK+    EHY  +++LL+ S +  +AE FIQ
Sbjct:   78 IRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG--YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR----MFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670          

HSP 2 Score: 229.565 bits (584), Expect = 2.977e-62
Identity = 137/506 (27.08%), Postives = 265/506 (52.37%), Query Frame = 1
Query:  481 SLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECT-SNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEA-HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992
            +L   R+IHA + + GL++++F   KL   Y+       +  VF   + + N Y WN+++R    +G   + + L  + ++R   V+ ++YTF +V+K+ AG      G   +  ++  GF +   +   L+++Y + G +  A +VF+E+P RD++ W ++I+G++ +    EAL     + +  I P+S  ++++LP  G +   K GQ +H + +K+   S  +     L+ MY K       R+VF     R+++S+  ++ GY+    +E+++R +     + FKPD++TV++VL  C  LR L+    I+ Y +K  F    ++   L+ +Y+KCG +  +  +FN +E ++ +SW ++I  Y +SG L EA+ +F+ M + + + D +    ++++   L  +K GK +H   +K       SVS  ++ MY  CG + ++  +F ++    ++TW  +I A   + D   G + +  QM      P+  TF V L +C
Sbjct:   19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG--LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG-LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR-MFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG-LQVTTQMRKSEVVPDMATFLVTLPMC 519          

HSP 3 Score: 165.236 bits (417), Expect = 7.468e-41
Identity = 105/409 (25.67%), Postives = 207/409 (50.61%), Query Frame = 1
Query:  769 KSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEI-PERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAH-GYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSI 1989
            ++ + +S   +  + HAL++  G  +S      LI+ Y    +   +  VF  + P +++ LW ++I  F+ N +  EAL +   +    + P+     +++     ++  ++G  V+  ++    +   L + + L+DMY + G +   RQVF     R+ +SW +L+SGY S+G  E+AL     ++     PD  TV++VLP    L  +  G  +H +A+K+     V +   L+ MY K      + ++F+ ++ R+ +S+  MI  Y +   + E++ +F    L + +PD + ++ +L  CG L+ + L K I+  +LK  F    +V   ++ +Y  CG M  A+ VF+++  K +++W +II  +    DL E A+ LF  M+      +H T+ +++S+
Sbjct:   12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLME-AMKLFKMMMIMEEQADHITYLMLISV 417          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.165e-79
Identity = 171/567 (30.16%), Postives = 287/567 (50.62%), Query Frame = 1
Query:  451 SLLASCVR-LKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECT-SNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNL-NEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            SLL  C    KSL   + +H  I T GL  +  L   L ++Y +C     A+ VF+     ++ Y WN+L+ G   S    + D L  F  + + ++ + + +TF  V+K++        G   H L+VK G++   ++ + L+ +Y K    + + +VF+E+PERD+  W  VI+ F  +    +AL     M S G  PNSV LT  +     +   + G+E+H   VK K +     + S L+DMY KC  +E  R+VF     ++ ++W +++ GY++ G  +  +  +  M  EG +P   T+ ++L  C++ R L HG  IH Y +++    ++ +  SL+ +Y KCG  + +  +F+  +     SW  MI SY   G   +A+ V+  M     +PD V    +L  C +L A++ GK+IH  + +   E+   + + ++ MY  CG    A  +F+++  K  ++WT +I A+G +     A+  F +M   G  P+  T   VLS C  AGL+DE  + FS M  KY ++   EHY  MI++L  +GR  EA   IQ
Sbjct:    8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSG--YSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK-KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571          

HSP 2 Score: 163.31 bits (412), Expect = 9.259e-41
Identity = 92/357 (25.77%), Postives = 184/357 (51.54%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSM-LRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGME 1419
            I  F +  + ++AL +   ++  G   N  + +  +++C RL  L  G++IH      G E +E++ + L  MY  C  +E A+ VF +    +  +WN++++G V  G  +    +   + M       ++ T +++L + + +     G   H  +++   +N+ + +   LI+LYFKCG+  LA  VF +  +     W  +I+ +       +A+     M+S G+ P+ V  T++LP   ++ A + G+++H  + +++  + +L + S L+DMY KCG+ +   ++F    +++ +SWT ++S Y S+G+  +AL     MQ+ G KPD VT+  VL  C     ++ G++
Sbjct:  180 ISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSK--SCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL-LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLK 532          

HSP 3 Score: 83.5741 bits (205), Expect = 3.019e-15
Identity = 73/316 (23.10%), Postives = 140/316 (44.30%), Query Frame = 1
Query:  385 EALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHA-LLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDI------ILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVI---GEVW--ARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGR 1296
            +A+ + D +   G+  +  TF+S+L +C +L +L  G+QIH  I  + LE +E L + L  MY+ CG+ ++A R+F+     +  SW  ++      G+ R  + L  F EM+   +  +  T   VL +   A    +GLK  + +  KYG        + +I++  + G++  A+ + ++ PE          L+ A      H+   R     AR ++    YP+      +L  +   GE W  AR+V  ++    ++ K     + +   +   + +         V+ C          AL+SG++ +G+
Sbjct:  393 KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR--EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDR----IARLLVEN--YPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYEC---------LALLSGHMESGQ 691          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.563e-79
Identity = 177/607 (29.16%), Postives = 302/607 (49.75%), Query Frame = 1
Query:  472 RLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNA--YSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISE-GIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQE-----------------------------------GFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVK-------NCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGL--EARNVISWTAMIESYAESGCLPEAIGVFRSM--QLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPS-VSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            + K+++  + IH  + + G+     L + L   Y S G +  A  +      ++A  Y WN+L+R    +G       L  F  M SL+   + YTF  V K+    S+ R G  AHAL +  GFI++  +   L+ +Y +C  +  A +VF+E+   D++ W ++I  +A     + AL     M +E G  P+++ L  +LP    +    +G+++H + V T    + + + + L+DMY KCG M+    VF     ++ +SW A+++GY   GR E A+R    MQ+E                                   G KP+ VT+ +VL  CA + AL HG EIH YA+K       N       ++  L+ MY+KC  +D +  +F+ L  + R+V++WT MI  Y++ G   +A+ +   M  +  + RP++  ++  L  C  L A+++GK+IH   L+    ++P  VS  ++ MY  CG +S+A+LVFD +  K  +TWT+++  +G +   E A+ +F +M   GF  +  T  VVL  C  +G++D+  + F+ M   + V    EHY  +++LL  +GR   A R I+
Sbjct:   37 KCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCAN--KCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV-TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIE 639          

HSP 2 Score: 201.83 bits (512), Expect = 3.837e-53
Identity = 157/589 (26.66%), Postives = 266/589 (45.16%), Query Frame = 1
Query:  442 TFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRS-LAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVF-----------------------------------EEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVK------TKSYSKQLSIQSGLIDMYCKCGDMESGRQVF--YCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEG--FKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMI-MYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNA-KLVFDAVRVKGSMTWTAIIEA---HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRK 2049
            TF  +  +C  + S+  G   HA     G  +N F+   L  MY+ C S+ DA++VFDE +  +  SWN+++      G+ +    L  FS M +      +  T   VL   A       G + H   V    I +  +   L+++Y KCG +  A+ VF                                   EE  + D++ W A I+G+A   +  EAL   R M+S GI PN V L ++L     V A   G+E+H Y +K         +  +  + + LIDMY KC  +++ R +F      ER+ ++WT ++ GY  +G   +AL  +  M +E    +P+  T++  L  CA L AL  G +IHAYA++N        V++ +I MY+KCG +  +  +F+ + A+N ++WT+++  Y   G   EA+G+F  M+    + D V +  +L  C     I  G E   + +K  F   P     A +V + G  G ++ A +L+ +       + W A +     HG  +L E A     ++ S+    +  ++ ++ ++   AG   +  +I S+M  K
Sbjct:  129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV--ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR-MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASN----HDGSYTLLSNLYANAGRWKDVTRIRSLMRHK 710          

HSP 3 Score: 88.9669 bits (219), Expect = 6.970e-17
Identity = 79/333 (23.72%), Postives = 139/333 (41.74%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAH-------IRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECT--SNNAYSWNALLRGSVVSGR-KRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSS-----MLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESG-RQVFYCSGERNAISWTALMSGYISNGRLE 1302
            I  +A++    EAL +   +   GI  N  T  S+L+ C  + +L HG++IH +       +R NG  +   +  +L  MY  C  ++ A+ +FD  +    +  +W  ++ G    G   + L++LS   E        N +T S  L + A  +A R G + HA    Y   N        +   LI++Y KCG I  A  VF+ +  ++ + W +++ G+  +    EAL     M   G   + V L  +L           G E    +      S      + L+D+  + G + +  R +     E   + W A +S    +G++E
Sbjct:  337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE-EDCQTRPNAFTISCALVACASLAALRIGKQIHA----YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP205_ARATH (Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 3.048e-79
Identity = 154/515 (29.90%), Postives = 276/515 (53.59%), Query Frame = 1
Query:  595 DAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSM-LRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMI-SEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKH-RPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMI-SDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEA 2127
            DA+++F E T  + Y WN LL+   +S  K++ +VL  FS M       + +T    LK+         G   H  + K   + S + + + LI +Y KCG++  A R+F+E+ + DI+ W ++++GF  N    +A+ + R M+ +  + P+ V L T++    ++   ++G+ VH +V++ + +S  LS+ + L++ Y K    +    +F    E++ ISW+ +++ Y+ NG   +AL     M  +G +P+V TV  VL  CA    L  G + H  A++      V + T+L+ MY KC   + +  +F+ +  ++V+SW A+I  +  +G    +I  F  M L  + RPD+++M ++L  C EL  ++  K  H  V+K  F+S P + A +V++Y  CG + NA  VF+ + +K ++ WT++I  +G +     A+  F+ M+ S    PN  TF  +LS C  AGL+ E  +IF +M   Y++  + EHY ++++LL   G  + A
Sbjct:   12 DARQMFGEMTKRSLYQWNTLLKS--LSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR-RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523          

HSP 2 Score: 189.119 bits (479), Expect = 1.449e-49
Identity = 127/496 (25.60%), Postives = 236/496 (47.58%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTN-GLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEM-RSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSV-VWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSM-QLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNA 1821
            +++ +R+ + +E L    ++ +     +  T    L +C  L+ + +G  IH  ++ +  L ++ ++ + L +MY  CG + +A R+FDE    +  +W++++ G   +G       +  F  M  +  V  +  T  T++ +    S  R G   H  +++ GF N   L   L+  Y K    K A  +F+ I E+D+I W  VIA +  N    EAL     M+ +G  PN   +  +L         + G++ H   ++ K    ++ + + L+DMY KC   E    VF     ++ +SW AL+SG+  NG   +++    + + +   +PD + +  VL  C++L  L      H+Y +K  F  N  I  SL+ +YS+CG L  + K+FNG+  ++ + WT++I  Y   G   +A+  F  M + S+ +P+ V    +L+ C     I  G  I  +++  D+   P++   A +V + G  G +  A
Sbjct:   32 LKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP--YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF-KLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523          

HSP 3 Score: 98.5969 bits (244), Expect = 6.170e-20
Identity = 72/296 (24.32%), Postives = 125/296 (42.23%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSG-RKRYLDVLSTF---SEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFA-HNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQV 1224
            I  + +     EAL + + +   G   N  T   +L +C     L  GR+ H      GLE    +   L  MY  C S E+A  VF      +  SW AL+ G  ++G   R ++  S     +  R  A+         VL S +      Q    H+ ++KYGF ++  +   L+ELY +CG +  A +VF  I  +D ++W ++I G+  H +  +    +   + S  + PN V   +IL           G  +   +V     +  L   + L+D+  + GD+++  ++
Sbjct:  236 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI-----LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 526          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.648e-79
Identity = 182/608 (29.93%), Postives = 301/608 (49.51%), Query Frame = 1
Query:  430 VNPTTFSSLLASCVRLKSLT----HGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTS-NNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQE--GFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPE-AIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS*DKKKQPCQVLVSITPHNLESQI 2229
            V P  FS  +   V  K        G+QIH  +  N L+ + FL+  L  MY   G   DA RVF E    +N   WN ++ G   SG       L  +   ++ +V L   +F+  L + + +     G + H  +VK G  N   + T L+ +Y KCG +  A  VF  + ++ + +W A++A +A N     AL+   +M  + + P+S  L+ ++     +     G+ VHA + K    S   +I+S L+ +Y KCG       VF    E++ ++W +L+SG   NG+ ++AL+    M+ +    KPD   + +V   CA L AL  G+++H   +K     NV + +SL+ +YSKCG+ + +LK+F  +   N+++W +MI  Y+ +  LPE +I +F  M      PDSV +  +L       ++  GK +HG  L+    S   +   ++ MY  CG    A+ +F  ++ K  +TW  +I  +G +  C  A+SLF +M   G +P+  TF  ++S C  +G V+E   IF  M + Y ++ + EHY  M++LL  +G  EEA  FI+   + + D     C +  S T HN+E  I
Sbjct:  164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE--SSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS-TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNN-LPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEA-DSSIWLCLLSASRTHHNVELGI 766          

HSP 2 Score: 237.269 bits (604), Expect = 7.082e-65
Identity = 150/565 (26.55%), Postives = 275/565 (48.67%), Query Frame = 1
Query:  328 NPQAIYKDIQAFARQNKLKEALAILDYVDQQG-IPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFD-------ECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFR--QGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPER-DIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKH--RPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVL 1983
            +P +I   I+A  ++ +  +AL +    D       +  TF SLL +C  L +L++G+ IH  +   G   + F+   L +MY  CG ++ A +VFD         ++ +   WN+++ G      +R+ + +  F  M    V  + ++ S V+        FR  +G + H  +++      S L+T LI++YFK G    A RVF EI ++ +++LW  +I GF  + +   +L+      +  +   S   T  L    +      G+++H  VVK   ++    + + L+ MY KCG +     VF C  ++    W A+++ Y  N     AL    +M+Q+   PD  T++ V+  C+ L   N+G  +HA   K       +I ++L+ +YSKCG    +  +F  +E +++++W ++I    ++G   EA+ VF  M+      +PDS +M  + N C  L+A++ G ++HG ++K        V + ++ +Y  CGL   A  VF ++  +  + W ++I  +  N+L E +I LF+ M+S G  P+  +   VL
Sbjct:   23 SPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF--KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY-VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584          

HSP 3 Score: 213.001 bits (541), Expect = 8.282e-57
Identity = 147/572 (25.70%), Postives = 270/572 (47.20%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWM--ISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVKG-SMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNH-FTFKVVLSICRKAGLVDEACQIFSVMTRK 2049
            I  F      + +L +        + +  T+F+  L +C + ++   GRQIH  +   GL N+ ++   L  MY+ CG + +A+ VF          WNA++  +  +        L  F  MR  +V  + +T S V+   +    +  G   HA L K    ++S + + L+ LY KCG    A+ VF+ + E+D++ WG++I+G   N   +EAL     M    + + P+S I+T++      + A + G +VH  ++KT      + + S LID+Y KCG  E   +VF      N ++W +++S Y  N   E ++     M  +G  PD V++ +VL   +   +L  G  +H Y ++     +  +  +L+ MY KCG   Y+  +F  ++ +++I+W  MI  Y   G    A+ +F  M+ +   PD V    +++ C     ++ GK I  + +K+D+   P++   A MV + G  GL+  A     A+ ++  S  W  ++ A   +   E  I    +++     P    T+  ++++  +AGL +EA ++  +M  K
Sbjct:  244 IVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMV--AAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF-EFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR--MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809          

HSP 4 Score: 59.3066 bits (142), Expect = 1.283e-7
Identity = 44/215 (20.47%), Postives = 99/215 (46.05%), Query Frame = 1
Query:  316 LHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVK-YGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIP-ERDIILW 954
            + ++N  A    I  ++R N  + ++ + + +  QGI  +  + +S+L +     SL  G+ +H +    G+ ++  L+  L  MY  CG  + A+ +F +    +  +WN ++ G    G    +  LS F EM+    + ++ TF +++ +   +    +G      + + YG   +      +++L  + G ++ A+   + +P E D  +W
Sbjct:  537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG--DCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A0D2TVW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G266500 PE=4 SV=1)

HSP 1 Score: 1370.53 bits (3546), Expect = 0.000e+0
Identity = 679/689 (98.55%), Postives = 684/689 (99.27%), Query Frame = 1
Query:   97 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXX-XXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSARSPPKPPKKPTK   ++RRNPPSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALL+KYGFINSSMLRTGLI+LYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMY KCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAG VDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL+S
Sbjct:    1 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSARSPPKPPKKPTKFPRKRRRNPPSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLIKYGFINSSMLRTGLIDLYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYSKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGFVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLTS 689          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A061EEF5_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein OS=Theobroma cacao GN=TCM_018189 PE=4 SV=1)

HSP 1 Score: 1143.64 bits (2957), Expect = 0.000e+0
Identity = 558/682 (81.82%), Postives = 609/682 (89.30%), Query Frame = 1
Query:  115 QSHSLPFSLQPSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXXXXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            QS SL F L    PNP F +  QF RI+ SARSPPKP + PT F  +R  P   PFF+K     SLPLH+KNP AIYKDIQ FARQNKLKEALAILDYVDQQGIPVNPTTFSSLLA+CVR KSL  GRQIH+HIRTNGLENNEFLRAKLAHMYTSCGSI+DA RVFDECTS N +SWNALLRG+V+SG+KRYLDVLST+SEMR LAV LN YTFS VLKSFAGASAFRQGLK HALL+K GFI+SSMLRTGLI+ YFKCGKIKLA RV EEIPERDI+LWGA+IAGFAHNRMQ+EAL+Y RWMIS GIYPNSVILTTILPVIGEVWARK+G+E+HAYVVKTKSYSKQL IQSGL+DMYCKCGDM+SGR+VFYCS ERNAISWTALMSGY+SNGRL QALRSVVWMQQEGFKPDVVTVAT+LPVCA+LRAL+HG EIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNG+EARNVISWTAMIESY +SG L EA+ VFRSMQ SKHRPDSV MARMLN+C EL+A+KLGKEIHGQVLKKDFESIP VSA +VKMYG+CGL+S AKLVF+AV VKG+MTWTAIIEA+GYNDLCE AISLFHQM SD F PNHFTFKVVLS+CR+AG VD ACQ+FS+MTRKY++K SEEHY I+IELLN  GRFEEAERF+QM SLSS
Sbjct:    5 QSSSLSFCLHSFPPNPFFCRNNQFSRIKASARSPPKPQRNPTIFAHRRSPP---PFFEKNAFPSSLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLAACVRSKSLADGRQIHSHIRTNGLENNEFLRAKLAHMYTSCGSIDDALRVFDECTSKNVHSWNALLRGTVISGKKRYLDVLSTYSEMRLLAVKLNVYTFSAVLKSFAGASAFRQGLKTHALLIKNGFIDSSMLRTGLIDFYFKCGKIKLACRVLEEIPERDIVLWGAMIAGFAHNRMQKEALSYVRWMISAGIYPNSVILTTILPVIGEVWARKLGREIHAYVVKTKSYSKQLVIQSGLVDMYCKCGDMDSGRRVFYCSRERNAISWTALMSGYVSNGRLNQALRSVVWMQQEGFKPDVVTVATILPVCAELRALSHGKEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGMEARNVISWTAMIESYVKSGHLHEALSVFRSMQFSKHRPDSVAMARMLNVCSELRAVKLGKEIHGQVLKKDFESIPFVSAGIVKMYGSCGLISTAKLVFEAVPVKGTMTWTAIIEAYGYNDLCEDAISLFHQMASDDFIPNHFTFKVVLSVCRQAGFVDRACQLFSLMTRKYELKASEEHYSIIIELLNTFGRFEEAERFVQMSSLSS 683          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: F6HN33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05930 PE=4 SV=1)

HSP 1 Score: 986.097 bits (2548), Expect = 0.000e+0
Identity = 459/617 (74.39%), Postives = 532/617 (86.22%), Query Frame = 1
Query:  307 SLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLS 2157
            SLPLH+KNP AI+ DIQ FARQ KLKEAL ILDY DQQGIPVNPTTFSSLL +CV  KSLTHG+QIH HIR NGLENNEFLR KL HMYTSCGS+EDA+ VFD  +S + Y+WNALLRG+V+SGR+ Y + LST+SEMR L V LN Y+FS ++KSFAGA+AFRQGLKAHALL+K G ++SS+LRT LI++YFKCGKIKLA  +FEEI ERD+++WGA+IAGF HNR+QREAL Y RWM  EGI PNSVI+TTILPVIGEV A K+G+EVHAYVVKTKSYSKQ+ IQS LIDMYCKCGDM SGRQVFY S ERNA+SWTALMSGY+SNGRL+QALRS+ WMQQEGF+PDVVTVATVLPVCA+LRAL  G EIH+YAVKN F PNVSI TSLM+MYSKCG LDYS KLF+G++ARNVISWTAMI+SY E+GCL EA+GVFRSMQLSKHRPDSV MAR+L+ICGEL+ +KLGKEIHGQ+LKKDFESIP VSAE++KMYG  G +S AKL F A+  KGSM WTAIIEA+GYNDL + AI+LFHQM SDGF PNH+TFK VLSIC +A L D+AC IF++M+R+Y++K S EHY  +IELLN  GR E+A+RFIQM+S S
Sbjct:    2 SLPLHTKNPHAIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICERAELADDACLIFNLMSRRYRIKASNEHYSSIIELLNRVGRTEDAQRFIQMRSAS 618          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A067LLI4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17232 PE=4 SV=1)

HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0
Identity = 455/617 (73.74%), Postives = 535/617 (86.71%), Query Frame = 1
Query:  307 SLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNN--AYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151
            SLPLHSKNP AI +DIQ FAR+NKLKEAL I+DY+DQQGIPVN TTFSSL+A+C+R KSL   +QIH  IR NG ENNEFLR KL HMYT+CGS++DAQ+VFDEC+S++   Y WNALLRG+VVSG KRYLDVLST++ MR L V LN Y+FS V+KSFAGASA RQGLKAHA+LVK G I+SS+LRT LI++YFKCGKIKLAH+VFEE  +RDI+ WGA+I+GFAHNR Q EAL+Y RWM+SEG+YPNSVI+TTIL VIG+ WARK+G+E+H YVVKTKSYSKQL+IQSGLIDMYCKCGDM S R+VFY S ERNAISWTALMSGY SNGRLEQALRSV WMQQEGF+PDVVTVAT++PVC++L+ALNHG EIHAYAVKN FFPNVS+ TSLM MYSKCGVLDYS+KLFN +E+RNVISWTA+I+SYAE+GC+ EA+ VFRSMQLSKHRPDSVVM+RML+IC E+KA+KLGKEIHG  +KKDFESIP VSA++VKMYG  GL+ NAK +F A+ VKGSM WTAIIEA+GYN+L + AI LFH+MIS GFTP HFTFKVVLSIC +AG  D+AC+IF +M+R+YK+K SEEH  I+  LL  +GR +EAERF +M S
Sbjct:   70 SLPLHSKNPGAICEDIQKFARENKLKEALTIMDYLDQQGIPVNVTTFSSLIAACIRSKSLDQAKQIHVFIRINGFENNEFLRTKLVHMYTACGSLKDAQQVFDECSSSSSSVYPWNALLRGTVVSGSKRYLDVLSTYTTMRELGVELNVYSFSNVIKSFAGASALRQGLKAHAVLVKNGLIDSSILRTSLIDMYFKCGKIKLAHKVFEETLDRDIVFWGAMISGFAHNRRQWEALDYFRWMVSEGMYPNSVIVTTILNVIGDKWARKLGKEIHGYVVKTKSYSKQLTIQSGLIDMYCKCGDMGSSRRVFYGSMERNAISWTALMSGYASNGRLEQALRSVSWMQQEGFRPDVVTVATIVPVCSELKALNHGKEIHAYAVKNLFFPNVSVTTSLMKMYSKCGVLDYSVKLFNNMESRNVISWTAIIDSYAENGCINEAMNVFRSMQLSKHRPDSVVMSRMLSICAEIKAVKLGKEIHGHAIKKDFESIPFVSADLVKMYGRSGLIDNAKSIFHAIPVKGSMAWTAIIEAYGYNNLWQEAIYLFHEMISGGFTPTHFTFKVVLSICDQAGFADDACRIFELMSRRYKIKASEEHCSIIAGLLTRAGRTQEAERFTKMSS 686          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: B9IQB5_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0019s10410g PE=4 SV=2)

HSP 1 Score: 955.666 bits (2469), Expect = 0.000e+0
Identity = 455/685 (66.42%), Postives = 554/685 (80.88%), Query Frame = 1
Query:  115 QSHSLPFSLQ--PSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXXXXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSN-NAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            QS SL   L   P +P  +    +QF +I+ S ++ P   + P K  ++     + P         SLPLH KNPQAIYKDIQ F+R+N+LK+AL I+DY+DQQGIPVNPTTFS+L+A+C+R KSLT  ++IH H+R NGL+NNEFLR KL HMYTSCGSIEDA+ VFDECTS    Y WNAL+RG+V+SG+KRY DVLS + EMR   V LNEYTFS V+KSFAGASA +QG K HA+++K G I+S++LRT LI++YFKCGK +LAH VFEE+ ERDI+ WGA+IAGFAHNR Q EAL+Y RWM+SEG+YPNSVI+T+ILPVIGEVWAR++GQEVH YV+K K YS++LSIQSGLIDMYCKCGDM SGR+VFY S ERN +SWTALMSGY+SNGRLEQALRSVVWMQQEG +PDVVTVATV+PVCA+L+ L HG EIHA++VK  F PNVS+ TSL+ MYSKCGVLDYS+KLF+G+EARNVI+WTAMI+SY E+GC+ EA  VFR MQ SKHRPDSV MARML+IC ++K +K GKEIHG +LKKDFESIP VS+E+VKMYG+CGL+ +A+ VF+AV VKGSMTWTAIIEA+GYN L + AI LF +M S  FTPN FTFKVVLSIC +AG  D+AC+IF +M+++YKVK+S EHY I+I LLN SGR   A+RFI M +L S
Sbjct:    2 QSPSLSLHLHCFPQNPLNINITHRQFSKIKSSTQTQPVQTQNPNKKHQQFDERDAFP--------ASLPLHKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSALIAACIRSKSLTKAKEIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECTSTATVYPWNALIRGTVISGKKRYGDVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMISSAVLRTCLIDMYFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRRQWEALDYVRWMVSEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCGDMGSGRRVFYGSRERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPNVSLTTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCINEAFNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPFVSSELVKMYGSCGLVHSAESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTPNDFTFKVVLSICDEAGFADDACRIFELMSKRYKVKISGEHYAIIIGLLNRSGRTRAAQRFIDMSNLLS 678          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A067E989_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047571mg PE=4 SV=1)

HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0
Identity = 455/685 (66.42%), Postives = 547/685 (79.85%), Query Frame = 1
Query:   97 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXXXXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151
            ME  Q  + SL   +    PNP+     QF +++ SA  P     +  K    +++     F    PSS  LPLH KNP+AIYKDIQ FARQNKLKEAL ILDY+DQQGIPVN TTF++L+ +CVR +SL  GR IH HIR NGLENN FLR KL  MYTSCGS EDA++VFDE +S + Y WNALLRG+V++G+KRY  VL  + +MR L V LN YTFS V+KSFAGASA  QGLK HALL+K GF++  +LRT LI++YFKCGKIKLA RVF+E  +RDI++WG++IAGFAHNR++ EAL+ ARWMI EGIYPNSV+LT +LPVIGE WARK+GQEVHAYV+K + YS++L ++S L+DMYCKC DM S  +VFY + ERN I WTALMSGY+SNGRLEQALRS+ WMQQEGF+PDVVTVATV+PVC+QL+ALNHG EIHAYAVKN F PNVSI+TSLMIMYSKCGVLDYSLKLF+ +E RNVISWTAMI+S  E+G L +A+GVFRSMQLSKHRPDSV MARML++ G+LKA+KLGKEIHGQVLKKDF S+P V+AE +KMYG CG +  AKLVFDAV VKGS+TWTAIIEA+GYNDLC+ A+SLF +M + GFTPNHFTFKV+LSIC +AG  DEAC+IF+VM+R YK++  EEHY IMI++L   GR EEA RF +M S
Sbjct:    1 MESTQALAVSLSLCVHSFPPNPI-SNNHQFFKLKASATKPESTYFQKRKKYHTKKSAEKDAF----PSS--LPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFREMSS 678          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A0A0KXW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649310 PE=4 SV=1)

HSP 1 Score: 933.324 bits (2411), Expect = 0.000e+0
Identity = 429/626 (68.53%), Postives = 525/626 (83.87%), Query Frame = 1
Query:  277 PFFQKAPSSPS-LPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151
            P F +  + PS LPLH+KNP AIY+D+Q FARQNKLKEAL I+DYVDQQGIPVN TTFSSL+ +CVR KS+T+ +QIHAHIR NGLENNEF+R +L HMYT+CGS+E+AQ++FDE +S + Y WNALLRG+V++GR+ Y  +LST++EMR L V LN Y+F+ ++KSFAGASAF QGLKAH LL+K G I SS+L T L+++YFKCGKIKLA ++F EI ERD+++WG++IAGFAHNR+QREAL Y R MI +GI PNSVILTTILPVIGE+WAR++GQEVHAYV+KTKSYSKQ+ IQS LIDMYCKCGD+ SGR VFY S ERNAI WTALMSGY  NGRLEQA+RSV+WMQQEGF+PD+VTVAT+LPVCAQLRAL  G EIHAYA+KNCF PNVSIV+SLM+MYSKCGV+DY+LKLFNG+E RNVI WTAMI+SY E+ C  EAI +FR+MQLSKHRPD+V M+R+L IC E K +K+GKEIHGQVLK+ FE +  VSAE+VK+YG CG +  AK+VF+A+ VKG MTWTAIIEA+G +   + AI LF +M S G +PNHFTFKVVLSIC++AG VDEA +IF +M+ +YK+K SEEHY ++I +L   GR EEA R++QM S
Sbjct:   60 PTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRLEEARRYVQMLS 685          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: W9T1A9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001633 PE=4 SV=1)

HSP 1 Score: 921.383 bits (2380), Expect = 0.000e+0
Identity = 429/626 (68.53%), Postives = 519/626 (82.91%), Query Frame = 1
Query:  277 PFFQKAPSSP-SLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151
            P F K  + P SLPLHSKNP+A+Y DIQ FARQNKL +AL ILDY+DQQGIPVNPTTF++L+A+CVR KSL HG+Q+HA IR NGL+ NEFLR KL HMYTSCGS++DA  +FDE  S + Y WNALLRG+V+SG +RY D LST+ +MR+L + +N Y+FS+V+KS AGASA  QGLK HALL+K G + S+MLRT LI++YFKCGKIKLA +VFEEI ERDI+ WGA+I+GFAHNR+Q +AL+Y R M+ EGI  NSVILT ILPVIGE+ ARK+G+EVHAY VKTK Y+KQ  IQSGLIDMYCKCGDME+GR+VFY   ERNAI WTAL+SGY++NGRLEQALRS++WMQQEG +PDVVTVATV+P+CA+LRAL  G EIHAYAVKNCF PNVSIV+SLM+MYSKCGVLDYS++LF G+E RNVI WTAMI+SY E+  L EA+ V RSM LSKHRPDSV + RML IC ELK++K GKEIHGQVLK++FES+  VSAE+VKMYG CG++ +AKLVFD +RVKGSMTWTAIIEA+  N L E AI LF++M   GFTPN+FTF+V LSIC +AG VD+AC+IF++MTR Y VK SEE Y ++I LL   GR E A+R++Q+ S
Sbjct:   19 PVFTKKDAFPESLPLHSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIPVNPTTFAALIAACVRTKSLDHGKQVHAFIRINGLDKNEFLRTKLVHMYTSCGSVDDANNLFDESPSRSVYPWNALLRGNVISGGRRYRDALSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLKTHALLIKNGLVGSAMLRTSLIDMYFKCGKIKLARQVFEEIVERDIVAWGAMISGFAHNRLQWQALDYTRRMVDEGIKLNSVILTIILPVIGELLARKLGREVHAYAVKTKRYAKQTFIQSGLIDMYCKCGDMENGRRVFYRLKERNAICWTALISGYVANGRLEQALRSIIWMQQEGIRPDVVTVATVVPICAELRALKPGKEIHAYAVKNCFLPNVSIVSSLMMMYSKCGVLDYSVRLFEGMEQRNVILWTAMIDSYVENRHLDEALSVIRSMVLSKHRPDSVAIGRMLCICNELKSLKFGKEIHGQVLKRNFESVHFVSAEIVKMYGRCGVIDDAKLVFDTIRVKGSMTWTAIIEAYRDNGLYEDAIDLFYEMRDKGFTPNNFTFQVALSICNEAGFVDDACRIFNLMTRSYNVKASEEQYSLIIGLLTRFGRVEAAQRYMQLSS 644          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: K7LFV1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0
Identity = 410/626 (65.50%), Postives = 516/626 (82.43%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154
            PF +K     SLPLH+KNP  I+KDI+ FARQNKLKEAL ILDYVDQ+GIPV+ TTFSS++A+C+R KSL  GR++H HIR NGLENN FLR KL HMYT+CGS+EDAQ++FD     + Y WNALLRG+VVSG+++Y+DVL T++EMR+L V LN Y+FS V+KSFAGA AF QGLK H LL+K G +++ +LRT LI++YFKCGK++LA RVFEEIPERD+++WGA++AGFAHNR+QRE L Y RWM+ EG+ PNSV++T ++PVIGEV AR++GQE HAYVVKTKSYSK + +QS LIDMYCKCGDM S R+VFY S ERN + WTALMSGY +NG+LEQALRS +WMQQEGF+PDVVT+ATVLPVCAQLRAL  G +IHAYA+K+ F PNVS+ +SLM MYSKCGV++YS +LF+ +E RNVISWTAMI+SY E+G L EA+GV RSMQLSKHRPDSV + RML++CGE K +KLGKEIHGQ+LK+DF S+  VSAE++ MYG  G ++ A LVF+AV VKGSMTWTA+I A+GYN+L + A++LF QM    ++PNHFTF+ +LSIC KAG VD+AC+IF+ M R YK++ S+EH+ IM+ LL  +G+ E+A+RF QM S 
Sbjct:   60 PFTEKDAFPSSLPLHNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQM---RYSPNHFTFEAILSICDKAGFVDDACRIFNSMPR-YKIEASKEHFAIMVRLLTHNGQLEKAQRFEQMSSF 681          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A0B2PR53_GLYSO (Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja GN=glysoja_006003 PE=4 SV=1)

HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0
Identity = 410/626 (65.50%), Postives = 516/626 (82.43%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154
            PF +K     SLPLH+KNP  I+KDI+ FARQNKLKEAL ILDYVDQ+GIPV+ TTFSS++A+C+R KSL  GR++H HIR NGLENN FLR KL HMYT+CGS+EDAQ++FD     + Y WNALLRG+VVSG+++Y+DVL T++EMR+L V LN Y+FS V+KSFAGA AF QGLK H LL+K G +++ +LRT LI++YFKCGK++LA RVFEEIPERD+++WGA++AGFAHNR+QRE L Y RWM+ EG+ PNSV++T ++PVIGEV AR++GQE HAYVVKTKSYSK + +QS LIDMYCKCGDM S R+VFY S ERN + WTALMSGY +NG+LEQALRS +WMQQEGF+PDVVT+ATVLPVCAQLRAL  G +IHAYA+K+ F PNVS+ +SLM MYSKCGV++YS +LF+ +E RNVISWTAMI+SY E+G L EA+GV RSMQLSKHRPDSV + RML++CGE K +KLGKEIHGQ+LK+DF S+  VSAE++ MYG  G ++ A LVF+AV VKGSMTWTA+I A+GYN+L + A++LF QM    ++PNHFTF+ +LSIC KAG VD+AC+IF+ M R YK++ S+EH+ IM+ LL  +G+ E+A+RF QM S 
Sbjct:   60 PFTEKDAFPSSLPLHNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQM---RYSPNHFTFEAILSICDKAGFVDDACRIFNSMPR-YKIEASKEHFAIMVRLLTHNGQLEKAQRFEQMSSF 681          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
PP430_ARATH1.892e-8127.60Pentatricopeptide repeat-containing protein At5g52... [more]
PP296_ARATH2.325e-8129.33Pentatricopeptide repeat-containing protein At3g63... [more]
PP146_ARATH3.356e-8129.20Pentatricopeptide repeat-containing protein At2g03... [more]
PP181_ARATH1.498e-8028.03Pentatricopeptide repeat-containing protein At2g33... [more]
PP431_ARATH2.763e-8029.64Pentatricopeptide repeat-containing protein At5g55... [more]
PP210_ARATH1.069e-7928.17Pentatricopeptide repeat-containing protein At3g03... [more]
PP398_ARATH1.165e-7930.16Pentatricopeptide repeat-containing protein At5g27... [more]
PP390_ARATH2.563e-7929.16Pentatricopeptide repeat-containing protein At5g16... [more]
PP205_ARATH3.048e-7929.90Putative pentatricopeptide repeat-containing prote... [more]
PP197_ARATH5.648e-7929.93Pentatricopeptide repeat-containing protein At2g40... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2TVW1_GOSRA0.000e+098.55Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061EEF5_THECC0.000e+081.82Pentatricopeptide repeat (PPR-like) superfamily pr... [more]
F6HN33_VITVI0.000e+074.39Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067LLI4_JATCU0.000e+073.74Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
B9IQB5_POPTR0.000e+066.42Pentatricopeptide repeat-containing family protein... [more]
A0A067E989_CITSI0.000e+066.42Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A0A0KXW0_CUCSA0.000e+068.53Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
W9T1A9_9ROSA0.000e+068.53Uncharacterized protein OS=Morus notabilis GN=L484... [more]
K7LFV1_SOYBN0.000e+065.50Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2PR53_GLYSO0.000e+065.50Pentatricopeptide repeat-containing protein, chlor... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 491..517
e-value: 4.7E-5
score: 23.2
coord: 261..287
e-value: 0.18
score: 12.0
coord: 364..382
e-value: 0.19
score: 11.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 491..525
e-value: 4.2E-6
score: 24.6
coord: 390..424
e-value: 0.0016
score: 16.5
coord: 593..625
e-value: 3.1E-5
score: 21.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 590..636
e-value: 1.2E-7
score: 31.7
coord: 388..434
e-value: 4.5E-9
score: 36.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 625..655
score: 8.298
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 357..387
score: 5.623
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..422
score: 11.444
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 590..624
score: 9.328
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 117..151
score: 7.651
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 524..558
score: 5.842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 9.131
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 152..182
score: 5.875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 183..219
score: 7.399
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..523
score: 10.687
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 6.599
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..285
score: 6.796
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 423..457
score: 5.842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 458..488
score: 6.193
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 661..692
score: 6.204
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 82..116
score: 6.566
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 157..184
e-value: 1.2E-4
score: 20.3
coord: 461..514
e-value: 1.2E-4
score: 20.3
coord: 76..124
e-value: 1.2E-4
score: 20.3
coord: 387..405
e-value: 1.2E-4
score: 20.3
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 58..84
coord: 459..687
NoneNo IPR availablePANTHERPTHR24015:SF755SUBFAMILY NOT NAMEDcoord: 139..423
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 139..423
NoneNo IPR availablePANTHERPTHR24015:SF755SUBFAMILY NOT NAMEDcoord: 58..84
coord: 459..687

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097647 ID=g.barbadense_cottongen_reftransV1_0097647; Name=g.barbadense_cottongen_reftransV1_0097647; organism=Gossypium barbadense; type=contig; length=2334bp
TGAAAATATAATTAAAAGGATAAATGAATTATTCGAAATGAAGTTAGAAA
ACTTGGGGCTCTTAGTCTCCTCCACTCCAGCACTCTGAAAGAAGCCATGG
AAATCATCCAATTCCAATCACACTCCCTTCCATTCAGTCTTCAGCCTTCT
TCTCCAAATCCTCTCTTTTATAAAACAAAGCAATTCTGCAGAATCCAAGG
CTCCGCAAGATCCCCACCCAAACCTCCCAAAAAACCAACAAAATTTCCCC
GCAAAAGAAGGAACCCGCCTTCATTGCCCTTCTTTCAGAAAGCTCCATCT
TCCCCCTCTTTACCTCTCCACTCCAAGAACCCACAGGCCATTTACAAAGA
CATTCAAGCATTCGCTAGACAAAACAAGCTCAAAGAAGCCCTCGCTATTT
TAGACTACGTTGATCAACAAGGCATCCCTGTAAATCCCACCACCTTCTCT
TCCCTCCTTGCTTCTTGCGTTCGTTTAAAATCCTTAACCCATGGAAGGCA
AATCCACGCTCATATTCGGACCAATGGTCTCGAAAACAACGAGTTCCTAC
GTGCCAAACTTGCCCATATGTACACTTCGTGTGGTTCCATTGAAGATGCC
CAAAGGGTGTTCGATGAATGTACTAGCAACAACGCTTATTCCTGGAATGC
TTTGCTTAGAGGTAGTGTTGTATCGGGTAGAAAACGGTATTTGGATGTGC
TTTCTACGTTTTCCGAAATGAGGTCATTGGCGGTAAATTTGAACGAGTAC
ACTTTCTCTACTGTTCTTAAGAGCTTCGCCGGTGCATCAGCATTTAGACA
AGGTTTAAAGGCTCATGCCCTTTTGGTTAAATACGGTTTCATTAATAGTT
CTATGCTTAGGACTGGTTTGATCGAATTATATTTTAAATGCGGAAAGATT
AAGCTCGCTCACCGCGTGTTTGAGGAAATCCCTGAGAGAGATATTATTTT
GTGGGGGGCGGTGATTGCTGGTTTTGCACATAATAGGATGCAAAGGGAAG
CTTTGAATTATGCTAGATGGATGATAAGTGAAGGTATATATCCCAATTCT
GTTATACTCACTACGATACTTCCAGTGATTGGGGAAGTTTGGGCTCGGAA
AGTAGGCCAGGAGGTCCATGCTTATGTGGTTAAGACGAAGAGTTACTCGA
AGCAGTTGTCTATTCAGTCTGGCTTAATTGATATGTACTGCAAGTGTGGT
GATATGGAATCGGGCAGGCAAGTTTTCTATTGTTCTGGAGAAAGGAATGC
GATTTCTTGGACCGCTTTGATGTCGGGATACATATCGAATGGGAGGCTTG
AGCAGGCTTTGAGATCGGTTGTATGGATGCAGCAGGAAGGGTTTAAGCCC
GATGTTGTCACGGTTGCCACAGTTCTTCCTGTTTGTGCCCAATTGAGGGC
TCTCAATCATGGGATGGAGATTCATGCGTATGCTGTAAAGAATTGTTTCT
TTCCCAATGTATCTATTGTTACTTCCCTGATGATTATGTACTCAAAGTGT
GGTGTTTTAGATTATTCTTTGAAGTTGTTTAATGGTTTAGAGGCAAGGAA
TGTAATTTCATGGACGGCCATGATTGAGTCATATGCAGAGAGTGGATGTT
TACCTGAAGCAATCGGTGTGTTTAGGTCAATGCAGTTGTCGAAACACAGG
CCGGACTCAGTGGTAATGGCAAGGATGTTGAACATTTGCGGTGAGCTTAA
AGCTATAAAGCTTGGGAAGGAGATTCATGGACAAGTCTTGAAGAAAGATT
TCGAGTCGATTCCTTCCGTTTCAGCAGAGATGGTTAAGATGTACGGTGCT
TGTGGGTTAATGAGCAATGCAAAGTTAGTATTTGATGCAGTCCGCGTTAA
GGGTTCTATGACATGGACTGCCATTATAGAGGCTCATGGATATAATGATC
TTTGTGAAGGGGCAATCAGTCTTTTTCATCAAATGATATCTGATGGTTTC
ACTCCAAACCATTTCACTTTCAAAGTGGTATTATCGATTTGCAGAAAGGC
TGGATTAGTTGATGAGGCTTGCCAAATATTCAGTGTAATGACTCGTAAAT
ATAAAGTCAAGGTATCCGAAGAGCATTATTGTATTATGATCGAGCTTCTT
AATATGTCTGGTCGCTTTGAGGAGGCTGAAAGATTCATCCAGATGAAATC
TCTATCATCTTAAGATAAAAAAAAACAGCCTTGTCAAGTTTTAGTTTCAA
TTACACCTCACAATTTGGAGAGTCAGATTAATCTTGATCAAGTCAATTCA
GTTTTCGTATGATTTTAAATTTATTCTAAGCTCGAGTTATTGTTTTTTAT
CGTCAAATTGATTGGATTGGATGTGAGTTTTCGG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_rpt
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding