g.barbadense_cottongen_reftransV1_0097647, g.barbadense_cottongen_reftransV1_0097647 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP430_ARATH (Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 1.892e-81 Identity = 167/605 (27.60%), Postives = 304/605 (50.25%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAF---RQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDME-SGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154 I AF + + AL++ + + G N TFSS++ SC L+ +++G ++H + G E N + + L+ +Y+ CG ++A +F + + SW ++ S + G +++ + L +SEM V NE+TF +L GAS+F G H+ ++ G + +L+T L++ Y + K++ A RV E+D+ LW +V++GF N +EA+ M S G+ PN+ + IL + V + G+++H+ +K + + + L+DMY KC E +VF N +SWT L+ G + +G ++ ++ M + +P+VVT++ VL C++LR + +EIHAY ++ + + SL+ Y+ +DY+ + ++ R+ I++T+++ + E G A+ V M R D + + ++ L A++ GK +H +K F SV +V MY CG + +AK VF+ + ++W ++ N A+S F +M P+ TF ++LS C L D + F VM + Y ++ EHY ++ +L +GR EEA ++ L Sbjct: 96 ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI--SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL----GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHL 693 HSP 2 Score: 221.861 bits (564), Expect = 1.012e-59 Identity = 136/532 (25.56%), Postives = 267/532 (50.19%), Query Frame = 1 Query: 445 FSSLLASCVRLKSLTH------GRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDY-SLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLC--EGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVD 2013 +L SC+R+ S G IH + GL N L L +Y I +A+++FDE + ++W ++ S + + + LS F EM + + NE+TFS+V++S AG G + H ++K GF +S++ + L +LY KCG+ K A +F + D I W +I+ R REAL + M+ G+ PN +L + G+ +H+ ++ + + +++ L+D Y + ME +V SGE++ WT+++SG++ N R ++A+ + + M+ G +P+ T + +L +C+ +R+L+ G +IH+ +K F + + +L+ MY KC + + ++F + + NV+SWT +I + G + + G+ M + P+ V ++ +L C +L+ ++ EIH +L++ + V +V Y + + A V +++ + ++T+T+++ +N+L E A+S+ + M DG + + +S G ++ Sbjct: 20 LGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMI--SAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNII-VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR--FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALE 545 HSP 3 Score: 218.779 bits (556), Expect = 1.330e-58 Identity = 160/644 (24.84%), Postives = 296/644 (45.96%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKL-AHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLV----DEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS*DKKKQPCQVLVSITPHNLESQ--INLDQVNSVF 2256 I + K +EAL + + G+P N TF LL + L L G+ IH++I G+ N L+ L Y+ +EDA RV + + + W +++ G V + R + + + TF EMRSL + N +T+S +L + + G + H+ +K GF +S+ + L+++Y KC ++ A RVF + +++ W +I G + ++ M+ + PN V L+ +L ++ + E+HAY+++ + ++ + + L+D Y ++ V R+ I++T+L++ + G+ E AL + +M +G + D +++ + A L AL G +H Y+VK+ F S++ SL+ MYSKCG L+ + K+F + +V+SW ++ A +G + A+ F M++ + PDSV +L+ C + LG E + QV+KK + P V +V + G G + A V + + +K PN FK +L CR G + D A + ++ + Y ++ +L + SG+ E A++ + + KK V V H+ S+ +D+ N ++ Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAK--EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR-RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE-YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLK----------------------------------PNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPAL------YILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIY 795 HSP 4 Score: 171.4 bits (433), Expect = 6.603e-43 Identity = 113/431 (26.22%), Postives = 204/431 (47.33%), Query Frame = 1 Query: 772 SFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMS-NAKLVFDAVRVKGSMTWTAIIEA---HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKY 2052 SF +++ R GL H ++K+G + + L L+ LY K I A ++F+E+ R + W +I+ F ++ AL+ M++ G +PN ++++ + G VH V+KT + + S L D+Y KCG + ++F + ISWT ++S + + +AL+ M + G P+ T +L + L L G IH+ + NV + TSL+ YS+ ++ ++++ N ++V WT+++ + + EA+G F M+ +P++ + +L++C ++++ GK+IH Q +K FE V +V MY C A VF A+ ++WT +I HG+ C G L +M+ PN T VL C K V +I + + R++ Sbjct: 32 SFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT-GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFG---LLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2) HSP 1 Score: 285.804 bits (730), Expect = 2.325e-81 Identity = 176/600 (29.33%), Postives = 316/600 (52.67%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSN-NAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSM-LRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQM 2145 I A+ + ALA+ + +G+P+ ++F +LL +C +L+ + G ++H+ + G + F+ L MY + A+R+FD +A WN++L SG+ L+ L F EM N YT + L + G S + G + HA ++K +S + + LI +Y +CGK+ A R+ ++ D++ W ++I G+ N M +EAL + MI+ G + V +T+I+ G + G E+HAYV+K + L + + LIDMY KC + F +++ ISWT +++GY N +AL + ++ + D + + ++L + L+++ EIH + ++ V I L+ +Y KC + Y+ ++F ++ ++V+SWT+MI S A +G EA+ +FR M + DSV + +L+ L A+ G+EIH +L+K F S++ +V MY CG + +AK VFD + KG + +T++I A+G + + A+ LF +M + +P+H +F +L C AGL+DE +M +Y+++ EHY ++++L + EA F++M Sbjct: 154 IGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS--LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749 HSP 2 Score: 277.715 bits (709), Expect = 1.566e-78 Identity = 169/573 (29.49%), Postives = 295/573 (51.48%), Query Frame = 1 Query: 271 SLPFFQKAPSSPSLPLHSKNP--------QAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHI-RTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPER-DIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPN 1959 S P + S P+ P +NP Q + F L EA LD V + PV F+ +L C + ++++ GRQ+H+ I +T +FL KL MY CGS++DA++VFDE A++WN ++ V +G L+ + MR V L +F +LK+ A R G + H+LLVK G+ ++ + L+ +Y K + A R+F+ E+ D +LW ++++ ++ + E L R M G PNS + + L K+G+E+HA V+K+ ++S +L + + LI MY +CG M ++ + ++W +L+ GY+ N ++AL M G K D V++ +++ +L L GME+HAY +K+ + N+ + +L+ MYSKC + Y + F + +++ISWT +I YA++ C EA+ +FR + + D +++ +L LK++ + KEIH +L+K + E+V +YG C M A VF++++ K ++WT++I + N A+ LF +M+ G + + Sbjct: 22 SFPRVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACF--DGVLTEAFQRLD-VSENNSPVE--AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEP--ASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586 HSP 3 Score: 78.1814 bits (191), Expect = 1.838e-13 Identity = 55/254 (21.65%), Postives = 120/254 (47.24%), Query Frame = 1 Query: 310 LPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTIL 1071 L +H K+ + I +A+ + EAL + V ++ + ++ S+L + LKS+ ++IH HI GL + ++ +L +Y C ++ A RVF+ + SW +++ S ++G + + + F M ++ + +L + A SA +G + H L++ GF + ++++Y CG ++ A VF+ I + ++ + ++I + + + A+ M E + P+ + +L Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES--EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 3.356e-81 Identity = 165/565 (29.20%), Postives = 289/565 (51.15%), Query Frame = 1 Query: 454 LLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSV--SAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142 LL+ C + SL RQ H + NGL + + KL +Y G +DA+ VFD+ + Y W +LR ++ K ++V+ + + ++ FS LK+ G K H LVK ++ +L TGL+++Y KCG+IK AH+VF +I R+++ W ++IAG+ N + E L M + N T++ ++ A G+ H +VK+ + S L+DMY KCGD+ + R+VF + + WTA++ GY NG + +AL M+ KP+ VT+A+VL C + L G +H ++K + + ++ +L+ MY+KC + +F +++++W ++I ++++G + EA+ +F M P+ V +A + + C L ++ +G +H +K F + SV ++ Y CG +A+L+FD + K ++TW+A+I +G G++ LF +M+ PN TF +LS C G+V+E + FS M + Y S +HY M+++L +G E+A I+ Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN--KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS-LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 606 HSP 2 Score: 244.588 bits (623), Expect = 2.208e-68 Identity = 150/493 (30.43%), Postives = 247/493 (50.10%), Query Frame = 1 Query: 385 EALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFP--NVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVK 1851 E + + D + + G + FS L +C L+ L +G++IH + +N L L MY CG I+ A +VF++ T N W +++ G V + + L F+ MR V NEYT+ T++ + SA QG H LVK G SS L T L+++Y KCG I A RVF E D+++W A+I G+ HN EAL+ + M I PN V + ++L G + ++G+ VH +K + ++ + L+ MY KC + VF E++ ++W +++SG+ NG + +AL M E P+ VTVA++ CA L +L G +HAY+VK F +V + T+L+ Y+KCG + +F+ +E +N I+W+AMI Y + G ++ +F M + +P+ +L+ CG + GK+ + KD+ PS MV M G + A + + + ++ Sbjct: 125 EVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE--EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT--NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS-MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.498e-80 Identity = 164/585 (28.03%), Postives = 294/585 (50.26%), Query Frame = 1 Query: 430 VNPTTFSSLLA--SCVRLKSLTH---------GRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRG-SVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGI--YPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142 ++P+TF + L + LK LTH GR +H I G L + Y CG + A +F+ + SWN+L+ G S G V+ F EMR+ + N YT + + K+ + + G +AHAL+VK + T L+ +Y K G ++ +VF +PER+ W +++G+A EA+ + E + + T +L + +G+++H +K +++ + L+ MY KC + ++F SG+RN+I+W+A+++GY NG +A++ M G KP T+ VL C+ + L G ++H++ +K F ++ T+L+ MY+K G L + K F+ L+ R+V WT++I Y ++ EA+ ++R M+ + P+ MA +L C L ++LGK++HG +K F + + + MY CG + + LVF K ++W A+I +N + A+ LF +M+++G P+ TF ++S C G V+ F++M+ + + +HY M++LL+ +G+ +EA+ FI+ Sbjct: 1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584 HSP 2 Score: 215.698 bits (548), Expect = 4.374e-58 Identity = 151/566 (26.68%), Postives = 265/566 (46.82%), Query Frame = 1 Query: 418 QGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGR-KRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVK-GSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLN 2103 Q I N T + + + L+S T GRQ HA + + ++ L MY G +ED +VF N Y+W+ ++ G GR + + V + F + + ++Y F+ VL S A G + H + +K G + L L+ +Y KC + A ++F+ +R+ I W A++ G++ N EA+ M S GI P+ + +L ++ + G+++H++++K + + L + L+DMY K G + R+ F C ER+ WT+L+SGY+ N E+AL M+ G P+ T+A+VL C+ L L G ++H + +K+ F V I ++L MYSKCG L+ +F ++V+SW AMI + +G EA+ +F M PD V +++ C ++ G + ++ P V A MV + G + AK ++ + G W ++ A + CE + ++++ G + T+ + I G + + +++ M VS+E C IEL N Sbjct: 112 QDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG-SRESSTYVQLSGIYTALGRMRDVERVWKHMRAN---GVSKEVGCSWIELKN 670 HSP 3 Score: 115.546 bits (288), Expect = 3.783e-25 Identity = 75/328 (22.87%), Postives = 147/328 (44.82%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGL----------IDMYCKCGDMESGRQVFYCSGERNAIS-WTALMSGYISNGRLE 1302 + +++ + EA+ + + GI + T +L +C + L G+Q+H+ + G E + F L MY G + DA++ FD + W +L+ G V + + L + M++ + N+ T ++VLK+ + + G + H +K+GF + + L +Y KCG ++ + VF P +D++ W A+I+G +HN EAL M++EG+ P+ V I+ +V + Y +S Q GL +D+ + G ++ ++ + + + W L+S ++G+ E Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNE--EALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH----------KGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCE 609
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP431_ARATH (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 2.763e-80 Identity = 174/587 (29.64%), Postives = 296/587 (50.43%), Query Frame = 1 Query: 394 AILDYVDQQGIPVNPTTF--SSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKK-DFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHG-YNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142 A++ +V+ + P F ++ +C LK GR +H ++ +GLE+ F+ + LA MY CG ++DA +VFDE NA +WNAL+ G V +G+ + + FS+MR V T ST L + A +G ++HA+ + G ++L T L+ Y K G I+ A VF+ + E+D++ W +I+G+ + +A+ + M E + + V L T++ K+G+EV Y ++ S+ + + S ++DMY KCG + ++VF + E++ I W L++ Y +G +ALR MQ EG P+V+T ++ L L +G V + + G++ N+ISWT M+ ++GC EAI R MQ S RP++ + L+ C L ++ +G+ IHG +++ S+ S+ +V MY CG ++ A+ VF + A+I A+ Y +L E AI+L+ + G P++ T VLS C AG +++A +IF+ + K +K EHY +M++LL +G E+A R I+ Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNE--EAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII-----LSLLRNG--------------QVDEAKDMFLQMQSSGIIP------------NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKE-AIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIE 708 HSP 2 Score: 238.039 bits (606), Expect = 2.948e-65 Identity = 151/564 (26.77%), Postives = 269/564 (47.70%), Query Frame = 1 Query: 319 HSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNG--LENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALL----RGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992 HS + + + + + + ++KEAL+++ +D + + + P + +L CV + L+ G+QIHA I NG NE++ KL Y C ++E A+ +F + N +SW A++ R + G L F EM + + + V K+ R G H +VK G + + + L ++Y KCG + A +VF+EIP+R+ + W A++ G+ N EA+ M +G+ P V ++T L + + G++ HA + + + + L++ YCK G +E VF E++ ++W ++SGY+ G +E A+ M+ E K D VT+AT++ A+ L G E+ Y +++ F ++ + +++M MY+KCG + + K+F+ +++I W ++ +YAESG EA+ +F MQL P+ V+ L I L+ +GQV + +M + G++ N ++WT ++ N E AI +M G PN F+ V LS C Sbjct: 31 HSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG------ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI-LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPN--VITWNLIILSLLR--------NGQV---------DEAKDMFLQMQSSGIIPNL------------ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556 HSP 3 Score: 221.861 bits (564), Expect = 9.282e-60 Identity = 129/451 (28.60%), Postives = 238/451 (52.77%), Query Frame = 1 Query: 694 DVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYG--FINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVM 2040 + LS +EM + + + +L+ G + HA ++K G + + + T L+ Y KC +++A +F ++ R++ W A+I + AL M+ I+P++ ++ + G + + G+ VH YVVK+ + + S L DMY KCG ++ +VF +RNA++W ALM GY+ NG+ E+A+R M+++G +P VTV+T L A + + G + HA A+ N + + TSL+ Y K G+++Y+ +F+ + ++V++W +I Y + G + +AI + + M+L K + D V +A +++ + +KLGKE+ ++ FES +++ ++ MY CG + +AK VFD+ K + W ++ A+ + L A+ LF+ M +G PN T+ +++ + G VDEA +F M Sbjct: 53 EALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502 HSP 4 Score: 65.4698 bits (158), Expect = 1.560e-9 Identity = 41/151 (27.15%), Postives = 75/151 (49.67%), Query Frame = 1 Query: 1558 SWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKK-DFESIPS-VSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAG 2004 S+ + S ++G + EA+ + M R + +L C + + GK+IH ++LK DF + + ++V Y C + A+++F +RV+ +W AII LCEGA+ F +M+ + P++F VV ++C+ G Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNF---VVPNVCKACG 184
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.069e-79 Identity = 169/600 (28.17%), Postives = 305/600 (50.83%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGI---YPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142 I+AF++ EAL + + + + TF S++ +C L G ++ I G E++ F+ L MY+ G + A++VFDE + SWN+L+ G S Y + L + E+++ + + +T S+VL +F +QG H +K G + ++ GL+ +Y K + A RVF+E+ RD + + +I G+ M E++ M E + P+ + ++++L G + + + ++ Y++K + + ++++ LID+Y KCGDM + R VF ++ +SW +++SGYI +G L +A++ M + D +T ++ V +L L G +H+ +K+ ++S+ +L+ MY+KCG + SLK+F+ + + ++W +I + G + V M+ S+ PD L +C L A +LGKEIH +L+ +ES + +++MY CG + N+ VF+ + + +TWT +I A+G E A+ F M G P+ F ++ C +GLVDE F M YK+ EHY +++LL+ S + +AE FIQ Sbjct: 78 IRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG--YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR----MFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670 HSP 2 Score: 229.565 bits (584), Expect = 2.977e-62 Identity = 137/506 (27.08%), Postives = 265/506 (52.37%), Query Frame = 1 Query: 481 SLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECT-SNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEA-HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992 +L R+IHA + + GL++++F KL Y+ + VF + + N Y WN+++R +G + + L + ++R V+ ++YTF +V+K+ AG G + ++ GF + + L+++Y + G + A +VF+E+P RD++ W ++I+G++ + EAL + + I P+S ++++LP G + K GQ +H + +K+ S + L+ MY K R+VF R+++S+ ++ GY+ +E+++R + + FKPD++TV++VL C LR L+ I+ Y +K F ++ L+ +Y+KCG + + +FN +E ++ +SW ++I Y +SG L EA+ +F+ M + + + D + ++++ L +K GK +H +K SVS ++ MY CG + ++ +F ++ ++TW +I A + D G + + QM P+ TF V L +C Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG--LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG-LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR-MFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG-LQVTTQMRKSEVVPDMATFLVTLPMC 519 HSP 3 Score: 165.236 bits (417), Expect = 7.468e-41 Identity = 105/409 (25.67%), Postives = 207/409 (50.61%), Query Frame = 1 Query: 769 KSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEI-PERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAH-GYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSI 1989 ++ + +S + + HAL++ G +S LI+ Y + + VF + P +++ LW ++I F+ N + EAL + + + P+ +++ ++ ++G V+ ++ + L + + L+DMY + G + RQVF R+ +SW +L+SGY S+G E+AL ++ PD TV++VLP L + G +H +A+K+ V + L+ MY K + ++F+ ++ R+ +S+ MI Y + + E++ +F L + +PD + ++ +L CG L+ + L K I+ +LK F +V ++ +Y CG M A+ VF+++ K +++W +II + DL E A+ LF M+ +H T+ +++S+ Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLME-AMKLFKMMMIMEEQADHITYLMLISV 417
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2) HSP 1 Score: 276.174 bits (705), Expect = 1.165e-79 Identity = 171/567 (30.16%), Postives = 287/567 (50.62%), Query Frame = 1 Query: 451 SLLASCVR-LKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECT-SNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNL-NEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142 SLL C KSL + +H I T GL + L L ++Y +C A+ VF+ ++ Y WN+L+ G S + D L F + + ++ + + +TF V+K++ G H L+VK G++ ++ + L+ +Y K + + +VF+E+PERD+ W VI+ F + +AL M S G PNSV LT + + + G+E+H VK K + + S L+DMY KC +E R+VF ++ ++W +++ GY++ G + + + M EG +P T+ ++L C++ R L HG IH Y +++ ++ + SL+ +Y KCG + + +F+ + SW MI SY G +A+ V+ M +PD V +L C +L A++ GK+IH + + E+ + + ++ MY CG A +F+++ K ++WT +I A+G + A+ F +M G P+ T VLS C AGL+DE + FS M KY ++ EHY MI++L +GR EA IQ Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSG--YSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK-KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571 HSP 2 Score: 163.31 bits (412), Expect = 9.259e-41 Identity = 92/357 (25.77%), Postives = 184/357 (51.54%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSM-LRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGME 1419 I F + + ++AL + ++ G N + + +++C RL L G++IH G E +E++ + L MY C +E A+ VF + + +WN++++G V G + + + M ++ T +++L + + + G H +++ +N+ + + LI+LYFKCG+ LA VF + + W +I+ + +A+ M+S G+ P+ V T++LP ++ A + G+++H + +++ + +L + S L+DMY KCG+ + ++F +++ +SWT ++S Y S+G+ +AL MQ+ G KPD VT+ VL C ++ G++ Sbjct: 180 ISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSK--SCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL-LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLK 532 HSP 3 Score: 83.5741 bits (205), Expect = 3.019e-15 Identity = 73/316 (23.10%), Postives = 140/316 (44.30%), Query Frame = 1 Query: 385 EALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHA-LLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDI------ILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVI---GEVW--ARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGR 1296 +A+ + D + G+ + TF+S+L +C +L +L G+QIH I + LE +E L + L MY+ CG+ ++A R+F+ + SW ++ G+ R + L F EM+ + + T VL + A +GLK + + KYG + +I++ + G++ A+ + ++ PE L+ A H+ R AR ++ YP+ +L + GE W AR+V ++ ++ K + + + + + V+ C AL+SG++ +G+ Sbjct: 393 KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR--EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDR----IARLLVEN--YPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYEC---------LALLSGHMESGQ 691
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.563e-79 Identity = 177/607 (29.16%), Postives = 302/607 (49.75%), Query Frame = 1 Query: 472 RLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNA--YSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISE-GIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQE-----------------------------------GFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVK-------NCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGL--EARNVISWTAMIESYAESGCLPEAIGVFRSM--QLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPS-VSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142 + K+++ + IH + + G+ L + L Y S G + A + ++A Y WN+L+R +G L F M SL+ + YTF V K+ S+ R G AHAL + GFI++ + L+ +Y +C + A +VF+E+ D++ W ++I +A + AL M +E G P+++ L +LP + +G+++H + V T + + + + L+DMY KCG M+ VF ++ +SW A+++GY GR E A+R MQ+E G KP+ VT+ +VL CA + AL HG EIH YA+K N ++ L+ MY+KC +D + +F+ L + R+V++WT MI Y++ G +A+ + M + + RP++ ++ L C L A+++GK+IH L+ ++P VS ++ MY CG +S+A+LVFD + K +TWT+++ +G + E A+ +F +M GF + T VVL C +G++D+ + F+ M + V EHY +++LL +GR A R I+ Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCAN--KCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV-TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIE 639 HSP 2 Score: 201.83 bits (512), Expect = 3.837e-53 Identity = 157/589 (26.66%), Postives = 266/589 (45.16%), Query Frame = 1 Query: 442 TFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRS-LAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVF-----------------------------------EEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVK------TKSYSKQLSIQSGLIDMYCKCGDMESGRQVF--YCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEG--FKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMI-MYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNA-KLVFDAVRVKGSMTWTAIIEA---HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRK 2049 TF + +C + S+ G HA G +N F+ L MY+ C S+ DA++VFDE + + SWN+++ G+ + L FS M + + T VL A G + H V I + + L+++Y KCG + A+ VF EE + D++ W A I+G+A + EAL R M+S GI PN V L ++L V A G+E+H Y +K + + + + LIDMY KC +++ R +F ER+ ++WT ++ GY +G +AL + M +E +P+ T++ L CA L AL G +IHAYA++N V++ +I MY+KCG + + +F+ + A+N ++WT+++ Y G EA+G+F M+ + D V + +L C I G E + +K F P A +V + G G ++ A +L+ + + W A + HG +L E A ++ S+ + ++ ++ ++ AG + +I S+M K Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV--ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR-MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASN----HDGSYTLLSNLYANAGRWKDVTRIRSLMRHK 710 HSP 3 Score: 88.9669 bits (219), Expect = 6.970e-17 Identity = 79/333 (23.72%), Postives = 139/333 (41.74%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAH-------IRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECT--SNNAYSWNALLRGSVVSGR-KRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSS-----MLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESG-RQVFYCSGERNAISWTALMSGYISNGRLE 1302 I +A++ EAL + + GI N T S+L+ C + +L HG++IH + +R NG + + +L MY C ++ A+ +FD + + +W ++ G G + L++LS E N +T S L + A +A R G + HA Y N + LI++Y KCG I A VF+ + ++ + W +++ G+ + EAL M G + V L +L G E + S + L+D+ + G + + R + E + W A +S +G++E Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE-EDCQTRPNAFTISCALVACASLAALRIGKQIHA----YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP205_ARATH (Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2) HSP 1 Score: 274.248 bits (700), Expect = 3.048e-79 Identity = 154/515 (29.90%), Postives = 276/515 (53.59%), Query Frame = 1 Query: 595 DAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSM-LRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMI-SEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKH-RPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMI-SDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEA 2127 DA+++F E T + Y WN LL+ +S K++ +VL FS M + +T LK+ G H + K + S + + + LI +Y KCG++ A R+F+E+ + DI+ W ++++GF N +A+ + R M+ + + P+ V L T++ ++ ++G+ VH +V++ + +S LS+ + L++ Y K + +F E++ ISW+ +++ Y+ NG +AL M +G +P+V TV VL CA L G + H A++ V + T+L+ MY KC + + +F+ + ++V+SW A+I + +G +I F M L + RPD+++M ++L C EL ++ K H V+K F+S P + A +V++Y CG + NA VF+ + +K ++ WT++I +G + A+ F+ M+ S PN TF +LS C AGL+ E +IF +M Y++ + EHY ++++LL G + A Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKS--LSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR-RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523 HSP 2 Score: 189.119 bits (479), Expect = 1.449e-49 Identity = 127/496 (25.60%), Postives = 236/496 (47.58%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTN-GLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEM-RSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSV-VWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSM-QLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNA 1821 +++ +R+ + +E L ++ + + T L +C L+ + +G IH ++ + L ++ ++ + L +MY CG + +A R+FDE + +W++++ G +G + F M + V + T T++ + S R G H +++ GF N L L+ Y K K A +F+ I E+D+I W VIA + N EAL M+ +G PN + +L + G++ H ++ K ++ + + L+DMY KC E VF ++ +SW AL+SG+ NG +++ + + + +PD + + VL C++L L H+Y +K F N I SL+ +YS+CG L + K+FNG+ ++ + WT++I Y G +A+ F M + S+ +P+ V +L+ C I G I +++ D+ P++ A +V + G G + A Sbjct: 32 LKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP--YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF-KLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523 HSP 3 Score: 98.5969 bits (244), Expect = 6.170e-20 Identity = 72/296 (24.32%), Postives = 125/296 (42.23%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSG-RKRYLDVLSTF---SEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFA-HNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQV 1224 I + + EAL + + + G N T +L +C L GR+ H GLE + L MY C S E+A VF + SW AL+ G ++G R ++ S + R A+ VL S + Q H+ ++KYGF ++ + L+ELY +CG + A +VF I +D ++W ++I G+ H + + + + S + PN V +IL G + +V + L + L+D+ + GD+++ ++ Sbjct: 236 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI-----LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 526
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 5.648e-79 Identity = 182/608 (29.93%), Postives = 301/608 (49.51%), Query Frame = 1 Query: 430 VNPTTFSSLLASCVRLKSLT----HGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTS-NNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQE--GFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPE-AIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS*DKKKQPCQVLVSITPHNLESQI 2229 V P FS + V K G+QIH + N L+ + FL+ L MY G DA RVF E +N WN ++ G SG L + ++ +V L +F+ L + + + G + H +VK G N + T L+ +Y KCG + A VF + ++ + +W A++A +A N AL+ +M + + P+S L+ ++ + G+ VHA + K S +I+S L+ +Y KCG VF E++ ++W +L+SG NG+ ++AL+ M+ + KPD + +V CA L AL G+++H +K NV + +SL+ +YSKCG+ + +LK+F + N+++W +MI Y+ + LPE +I +F M PDSV + +L ++ GK +HG L+ S + ++ MY CG A+ +F ++ K +TW +I +G + C A+SLF +M G +P+ TF ++S C +G V+E IF M + Y ++ + EHY M++LL +G EEA FI+ + + D C + S T HN+E I Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE--SSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS-TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNN-LPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEA-DSSIWLCLLSASRTHHNVELGI 766 HSP 2 Score: 237.269 bits (604), Expect = 7.082e-65 Identity = 150/565 (26.55%), Postives = 275/565 (48.67%), Query Frame = 1 Query: 328 NPQAIYKDIQAFARQNKLKEALAILDYVDQQG-IPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFD-------ECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFR--QGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPER-DIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKH--RPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVL 1983 +P +I I+A ++ + +AL + D + TF SLL +C L +L++G+ IH + G + F+ L +MY CG ++ A +VFD ++ + WN+++ G +R+ + + F M V + ++ S V+ FR +G + H +++ S L+T LI++YFK G A RVF EI ++ +++LW +I GF + + +L+ + + S T L + G+++H VVK ++ + + L+ MY KCG + VF C ++ W A+++ Y N AL +M+Q+ PD T++ V+ C+ L N+G +HA K +I ++L+ +YSKCG + +F +E +++++W ++I ++G EA+ VF M+ +PDS +M + N C L+A++ G ++HG ++K V + ++ +Y CGL A VF ++ + + W ++I + N+L E +I LF+ M+S G P+ + VL Sbjct: 23 SPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF--KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY-VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584 HSP 3 Score: 213.001 bits (541), Expect = 8.282e-57 Identity = 147/572 (25.70%), Postives = 270/572 (47.20%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWM--ISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVKG-SMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNH-FTFKVVLSICRKAGLVDEACQIFSVMTRK 2049 I F + +L + + + T+F+ L +C + ++ GRQIH + GL N+ ++ L MY+ CG + +A+ VF WNA++ + + L F MR +V + +T S V+ + + G HA L K ++S + + L+ LY KCG A+ VF+ + E+D++ WG++I+G N +EAL M + + P+S I+T++ + A + G +VH ++KT + + S LID+Y KCG E +VF N ++W +++S Y N E ++ M +G PD V++ +VL + +L G +H Y ++ + + +L+ MY KCG Y+ +F ++ +++I+W MI Y G A+ +F M+ + PD V +++ C ++ GK I + +K+D+ P++ A MV + G GL+ A A+ ++ S W ++ A + E I +++ P T+ ++++ +AGL +EA ++ +M K Sbjct: 244 IVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMV--AAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF-EFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR--MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809 HSP 4 Score: 59.3066 bits (142), Expect = 1.283e-7 Identity = 44/215 (20.47%), Postives = 99/215 (46.05%), Query Frame = 1 Query: 316 LHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVK-YGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIP-ERDIILW 954 + ++N A I ++R N + ++ + + + QGI + + +S+L + SL G+ +H + G+ ++ L+ L MY CG + A+ +F + + +WN ++ G G + LS F EM+ + ++ TF +++ + + +G + + YG + +++L + G ++ A+ + +P E D +W Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG--DCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A0D2TVW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G266500 PE=4 SV=1) HSP 1 Score: 1370.53 bits (3546), Expect = 0.000e+0 Identity = 679/689 (98.55%), Postives = 684/689 (99.27%), Query Frame = 1 Query: 97 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXX-XXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSARSPPKPPKKPTK ++RRNPPSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALL+KYGFINSSMLRTGLI+LYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMY KCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAG VDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL+S Sbjct: 1 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSARSPPKPPKKPTKFPRKRRRNPPSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLIKYGFINSSMLRTGLIDLYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYSKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGFVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLTS 689
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A061EEF5_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein OS=Theobroma cacao GN=TCM_018189 PE=4 SV=1) HSP 1 Score: 1143.64 bits (2957), Expect = 0.000e+0 Identity = 558/682 (81.82%), Postives = 609/682 (89.30%), Query Frame = 1 Query: 115 QSHSLPFSLQPSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXXXXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 QS SL F L PNP F + QF RI+ SARSPPKP + PT F +R P PFF+K SLPLH+KNP AIYKDIQ FARQNKLKEALAILDYVDQQGIPVNPTTFSSLLA+CVR KSL GRQIH+HIRTNGLENNEFLRAKLAHMYTSCGSI+DA RVFDECTS N +SWNALLRG+V+SG+KRYLDVLST+SEMR LAV LN YTFS VLKSFAGASAFRQGLK HALL+K GFI+SSMLRTGLI+ YFKCGKIKLA RV EEIPERDI+LWGA+IAGFAHNRMQ+EAL+Y RWMIS GIYPNSVILTTILPVIGEVWARK+G+E+HAYVVKTKSYSKQL IQSGL+DMYCKCGDM+SGR+VFYCS ERNAISWTALMSGY+SNGRL QALRSVVWMQQEGFKPDVVTVAT+LPVCA+LRAL+HG EIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNG+EARNVISWTAMIESY +SG L EA+ VFRSMQ SKHRPDSV MARMLN+C EL+A+KLGKEIHGQVLKKDFESIP VSA +VKMYG+CGL+S AKLVF+AV VKG+MTWTAIIEA+GYNDLCE AISLFHQM SD F PNHFTFKVVLS+CR+AG VD ACQ+FS+MTRKY++K SEEHY I+IELLN GRFEEAERF+QM SLSS Sbjct: 5 QSSSLSFCLHSFPPNPFFCRNNQFSRIKASARSPPKPQRNPTIFAHRRSPP---PFFEKNAFPSSLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLAACVRSKSLADGRQIHSHIRTNGLENNEFLRAKLAHMYTSCGSIDDALRVFDECTSKNVHSWNALLRGTVISGKKRYLDVLSTYSEMRLLAVKLNVYTFSAVLKSFAGASAFRQGLKTHALLIKNGFIDSSMLRTGLIDFYFKCGKIKLACRVLEEIPERDIVLWGAMIAGFAHNRMQKEALSYVRWMISAGIYPNSVILTTILPVIGEVWARKLGREIHAYVVKTKSYSKQLVIQSGLVDMYCKCGDMDSGRRVFYCSRERNAISWTALMSGYVSNGRLNQALRSVVWMQQEGFKPDVVTVATILPVCAELRALSHGKEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGMEARNVISWTAMIESYVKSGHLHEALSVFRSMQFSKHRPDSVAMARMLNVCSELRAVKLGKEIHGQVLKKDFESIPFVSAGIVKMYGSCGLISTAKLVFEAVPVKGTMTWTAIIEAYGYNDLCEDAISLFHQMASDDFIPNHFTFKVVLSVCRQAGFVDRACQLFSLMTRKYELKASEEHYSIIIELLNTFGRFEEAERFVQMSSLSS 683
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: F6HN33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05930 PE=4 SV=1) HSP 1 Score: 986.097 bits (2548), Expect = 0.000e+0 Identity = 459/617 (74.39%), Postives = 532/617 (86.22%), Query Frame = 1 Query: 307 SLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLS 2157 SLPLH+KNP AI+ DIQ FARQ KLKEAL ILDY DQQGIPVNPTTFSSLL +CV KSLTHG+QIH HIR NGLENNEFLR KL HMYTSCGS+EDA+ VFD +S + Y+WNALLRG+V+SGR+ Y + LST+SEMR L V LN Y+FS ++KSFAGA+AFRQGLKAHALL+K G ++SS+LRT LI++YFKCGKIKLA +FEEI ERD+++WGA+IAGF HNR+QREAL Y RWM EGI PNSVI+TTILPVIGEV A K+G+EVHAYVVKTKSYSKQ+ IQS LIDMYCKCGDM SGRQVFY S ERNA+SWTALMSGY+SNGRL+QALRS+ WMQQEGF+PDVVTVATVLPVCA+LRAL G EIH+YAVKN F PNVSI TSLM+MYSKCG LDYS KLF+G++ARNVISWTAMI+SY E+GCL EA+GVFRSMQLSKHRPDSV MAR+L+ICGEL+ +KLGKEIHGQ+LKKDFESIP VSAE++KMYG G +S AKL F A+ KGSM WTAIIEA+GYNDL + AI+LFHQM SDGF PNH+TFK VLSIC +A L D+AC IF++M+R+Y++K S EHY +IELLN GR E+A+RFIQM+S S Sbjct: 2 SLPLHTKNPHAIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICERAELADDACLIFNLMSRRYRIKASNEHYSSIIELLNRVGRTEDAQRFIQMRSAS 618
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A067LLI4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17232 PE=4 SV=1) HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0 Identity = 455/617 (73.74%), Postives = 535/617 (86.71%), Query Frame = 1 Query: 307 SLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNN--AYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151 SLPLHSKNP AI +DIQ FAR+NKLKEAL I+DY+DQQGIPVN TTFSSL+A+C+R KSL +QIH IR NG ENNEFLR KL HMYT+CGS++DAQ+VFDEC+S++ Y WNALLRG+VVSG KRYLDVLST++ MR L V LN Y+FS V+KSFAGASA RQGLKAHA+LVK G I+SS+LRT LI++YFKCGKIKLAH+VFEE +RDI+ WGA+I+GFAHNR Q EAL+Y RWM+SEG+YPNSVI+TTIL VIG+ WARK+G+E+H YVVKTKSYSKQL+IQSGLIDMYCKCGDM S R+VFY S ERNAISWTALMSGY SNGRLEQALRSV WMQQEGF+PDVVTVAT++PVC++L+ALNHG EIHAYAVKN FFPNVS+ TSLM MYSKCGVLDYS+KLFN +E+RNVISWTA+I+SYAE+GC+ EA+ VFRSMQLSKHRPDSVVM+RML+IC E+KA+KLGKEIHG +KKDFESIP VSA++VKMYG GL+ NAK +F A+ VKGSM WTAIIEA+GYN+L + AI LFH+MIS GFTP HFTFKVVLSIC +AG D+AC+IF +M+R+YK+K SEEH I+ LL +GR +EAERF +M S Sbjct: 70 SLPLHSKNPGAICEDIQKFARENKLKEALTIMDYLDQQGIPVNVTTFSSLIAACIRSKSLDQAKQIHVFIRINGFENNEFLRTKLVHMYTACGSLKDAQQVFDECSSSSSSVYPWNALLRGTVVSGSKRYLDVLSTYTTMRELGVELNVYSFSNVIKSFAGASALRQGLKAHAVLVKNGLIDSSILRTSLIDMYFKCGKIKLAHKVFEETLDRDIVFWGAMISGFAHNRRQWEALDYFRWMVSEGMYPNSVIVTTILNVIGDKWARKLGKEIHGYVVKTKSYSKQLTIQSGLIDMYCKCGDMGSSRRVFYGSMERNAISWTALMSGYASNGRLEQALRSVSWMQQEGFRPDVVTVATIVPVCSELKALNHGKEIHAYAVKNLFFPNVSVTTSLMKMYSKCGVLDYSVKLFNNMESRNVISWTAIIDSYAENGCINEAMNVFRSMQLSKHRPDSVVMSRMLSICAEIKAVKLGKEIHGHAIKKDFESIPFVSADLVKMYGRSGLIDNAKSIFHAIPVKGSMAWTAIIEAYGYNNLWQEAIYLFHEMISGGFTPTHFTFKVVLSICDQAGFADDACRIFELMSRRYKIKASEEHCSIIAGLLTRAGRTQEAERFTKMSS 686
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: B9IQB5_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0019s10410g PE=4 SV=2) HSP 1 Score: 955.666 bits (2469), Expect = 0.000e+0 Identity = 455/685 (66.42%), Postives = 554/685 (80.88%), Query Frame = 1 Query: 115 QSHSLPFSLQ--PSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXXXXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSN-NAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 QS SL L P +P + +QF +I+ S ++ P + P K ++ + P SLPLH KNPQAIYKDIQ F+R+N+LK+AL I+DY+DQQGIPVNPTTFS+L+A+C+R KSLT ++IH H+R NGL+NNEFLR KL HMYTSCGSIEDA+ VFDECTS Y WNAL+RG+V+SG+KRY DVLS + EMR V LNEYTFS V+KSFAGASA +QG K HA+++K G I+S++LRT LI++YFKCGK +LAH VFEE+ ERDI+ WGA+IAGFAHNR Q EAL+Y RWM+SEG+YPNSVI+T+ILPVIGEVWAR++GQEVH YV+K K YS++LSIQSGLIDMYCKCGDM SGR+VFY S ERN +SWTALMSGY+SNGRLEQALRSVVWMQQEG +PDVVTVATV+PVCA+L+ L HG EIHA++VK F PNVS+ TSL+ MYSKCGVLDYS+KLF+G+EARNVI+WTAMI+SY E+GC+ EA VFR MQ SKHRPDSV MARML+IC ++K +K GKEIHG +LKKDFESIP VS+E+VKMYG+CGL+ +A+ VF+AV VKGSMTWTAIIEA+GYN L + AI LF +M S FTPN FTFKVVLSIC +AG D+AC+IF +M+++YKVK+S EHY I+I LLN SGR A+RFI M +L S Sbjct: 2 QSPSLSLHLHCFPQNPLNINITHRQFSKIKSSTQTQPVQTQNPNKKHQQFDERDAFP--------ASLPLHKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSALIAACIRSKSLTKAKEIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECTSTATVYPWNALIRGTVISGKKRYGDVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMISSAVLRTCLIDMYFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRRQWEALDYVRWMVSEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCGDMGSGRRVFYGSRERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPNVSLTTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCINEAFNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPFVSSELVKMYGSCGLVHSAESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTPNDFTFKVVLSICDEAGFADDACRIFELMSKRYKVKISGEHYAIIIGLLNRSGRTRAAQRFIDMSNLLS 678
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A067E989_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047571mg PE=4 SV=1) HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0 Identity = 455/685 (66.42%), Postives = 547/685 (79.85%), Query Frame = 1 Query: 97 MEIIQFQSHSLPFSLQPSSPNPLFYKTKQFCRIQGSAXXXXXXXXXXXXXXXXXXXXXSLPFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151 ME Q + SL + PNP+ QF +++ SA P + K +++ F PSS LPLH KNP+AIYKDIQ FARQNKLKEAL ILDY+DQQGIPVN TTF++L+ +CVR +SL GR IH HIR NGLENN FLR KL MYTSCGS EDA++VFDE +S + Y WNALLRG+V++G+KRY VL + +MR L V LN YTFS V+KSFAGASA QGLK HALL+K GF++ +LRT LI++YFKCGKIKLA RVF+E +RDI++WG++IAGFAHNR++ EAL+ ARWMI EGIYPNSV+LT +LPVIGE WARK+GQEVHAYV+K + YS++L ++S L+DMYCKC DM S +VFY + ERN I WTALMSGY+SNGRLEQALRS+ WMQQEGF+PDVVTVATV+PVC+QL+ALNHG EIHAYAVKN F PNVSI+TSLMIMYSKCGVLDYSLKLF+ +E RNVISWTAMI+S E+G L +A+GVFRSMQLSKHRPDSV MARML++ G+LKA+KLGKEIHGQVLKKDF S+P V+AE +KMYG CG + AKLVFDAV VKGS+TWTAIIEA+GYNDLC+ A+SLF +M + GFTPNHFTFKV+LSIC +AG DEAC+IF+VM+R YK++ EEHY IMI++L GR EEA RF +M S Sbjct: 1 MESTQALAVSLSLCVHSFPPNPI-SNNHQFFKLKASATKPESTYFQKRKKYHTKKSAEKDAF----PSS--LPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFREMSS 678
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A0A0KXW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649310 PE=4 SV=1) HSP 1 Score: 933.324 bits (2411), Expect = 0.000e+0 Identity = 429/626 (68.53%), Postives = 525/626 (83.87%), Query Frame = 1 Query: 277 PFFQKAPSSPS-LPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151 P F + + PS LPLH+KNP AIY+D+Q FARQNKLKEAL I+DYVDQQGIPVN TTFSSL+ +CVR KS+T+ +QIHAHIR NGLENNEF+R +L HMYT+CGS+E+AQ++FDE +S + Y WNALLRG+V++GR+ Y +LST++EMR L V LN Y+F+ ++KSFAGASAF QGLKAH LL+K G I SS+L T L+++YFKCGKIKLA ++F EI ERD+++WG++IAGFAHNR+QREAL Y R MI +GI PNSVILTTILPVIGE+WAR++GQEVHAYV+KTKSYSKQ+ IQS LIDMYCKCGD+ SGR VFY S ERNAI WTALMSGY NGRLEQA+RSV+WMQQEGF+PD+VTVAT+LPVCAQLRAL G EIHAYA+KNCF PNVSIV+SLM+MYSKCGV+DY+LKLFNG+E RNVI WTAMI+SY E+ C EAI +FR+MQLSKHRPD+V M+R+L IC E K +K+GKEIHGQVLK+ FE + VSAE+VK+YG CG + AK+VF+A+ VKG MTWTAIIEA+G + + AI LF +M S G +PNHFTFKVVLSIC++AG VDEA +IF +M+ +YK+K SEEHY ++I +L GR EEA R++QM S Sbjct: 60 PTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRLEEARRYVQMLS 685
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: W9T1A9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001633 PE=4 SV=1) HSP 1 Score: 921.383 bits (2380), Expect = 0.000e+0 Identity = 429/626 (68.53%), Postives = 519/626 (82.91%), Query Frame = 1 Query: 277 PFFQKAPSSP-SLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151 P F K + P SLPLHSKNP+A+Y DIQ FARQNKL +AL ILDY+DQQGIPVNPTTF++L+A+CVR KSL HG+Q+HA IR NGL+ NEFLR KL HMYTSCGS++DA +FDE S + Y WNALLRG+V+SG +RY D LST+ +MR+L + +N Y+FS+V+KS AGASA QGLK HALL+K G + S+MLRT LI++YFKCGKIKLA +VFEEI ERDI+ WGA+I+GFAHNR+Q +AL+Y R M+ EGI NSVILT ILPVIGE+ ARK+G+EVHAY VKTK Y+KQ IQSGLIDMYCKCGDME+GR+VFY ERNAI WTAL+SGY++NGRLEQALRS++WMQQEG +PDVVTVATV+P+CA+LRAL G EIHAYAVKNCF PNVSIV+SLM+MYSKCGVLDYS++LF G+E RNVI WTAMI+SY E+ L EA+ V RSM LSKHRPDSV + RML IC ELK++K GKEIHGQVLK++FES+ VSAE+VKMYG CG++ +AKLVFD +RVKGSMTWTAIIEA+ N L E AI LF++M GFTPN+FTF+V LSIC +AG VD+AC+IF++MTR Y VK SEE Y ++I LL GR E A+R++Q+ S Sbjct: 19 PVFTKKDAFPESLPLHSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIPVNPTTFAALIAACVRTKSLDHGKQVHAFIRINGLDKNEFLRTKLVHMYTSCGSVDDANNLFDESPSRSVYPWNALLRGNVISGGRRYRDALSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLKTHALLIKNGLVGSAMLRTSLIDMYFKCGKIKLARQVFEEIVERDIVAWGAMISGFAHNRLQWQALDYTRRMVDEGIKLNSVILTIILPVIGELLARKLGREVHAYAVKTKRYAKQTFIQSGLIDMYCKCGDMENGRRVFYRLKERNAICWTALISGYVANGRLEQALRSIIWMQQEGIRPDVVTVATVVPICAELRALKPGKEIHAYAVKNCFLPNVSIVSSLMMMYSKCGVLDYSVRLFEGMEQRNVILWTAMIDSYVENRHLDEALSVIRSMVLSKHRPDSVAIGRMLCICNELKSLKFGKEIHGQVLKRNFESVHFVSAEIVKMYGRCGVIDDAKLVFDTIRVKGSMTWTAIIEAYRDNGLYEDAIDLFYEMRDKGFTPNNFTFQVALSICNEAGFVDDACRIFNLMTRSYNVKASEEQYSLIIGLLTRFGRVEAAQRYMQLSS 644
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: K7LFV1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0 Identity = 410/626 (65.50%), Postives = 516/626 (82.43%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154 PF +K SLPLH+KNP I+KDI+ FARQNKLKEAL ILDYVDQ+GIPV+ TTFSS++A+C+R KSL GR++H HIR NGLENN FLR KL HMYT+CGS+EDAQ++FD + Y WNALLRG+VVSG+++Y+DVL T++EMR+L V LN Y+FS V+KSFAGA AF QGLK H LL+K G +++ +LRT LI++YFKCGK++LA RVFEEIPERD+++WGA++AGFAHNR+QRE L Y RWM+ EG+ PNSV++T ++PVIGEV AR++GQE HAYVVKTKSYSK + +QS LIDMYCKCGDM S R+VFY S ERN + WTALMSGY +NG+LEQALRS +WMQQEGF+PDVVT+ATVLPVCAQLRAL G +IHAYA+K+ F PNVS+ +SLM MYSKCGV++YS +LF+ +E RNVISWTAMI+SY E+G L EA+GV RSMQLSKHRPDSV + RML++CGE K +KLGKEIHGQ+LK+DF S+ VSAE++ MYG G ++ A LVF+AV VKGSMTWTA+I A+GYN+L + A++LF QM ++PNHFTF+ +LSIC KAG VD+AC+IF+ M R YK++ S+EH+ IM+ LL +G+ E+A+RF QM S Sbjct: 60 PFTEKDAFPSSLPLHNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQM---RYSPNHFTFEAILSICDKAGFVDDACRIFNSMPR-YKIEASKEHFAIMVRLLTHNGQLEKAQRFEQMSSF 681
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A0B2PR53_GLYSO (Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja GN=glysoja_006003 PE=4 SV=1) HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0 Identity = 410/626 (65.50%), Postives = 516/626 (82.43%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154 PF +K SLPLH+KNP I+KDI+ FARQNKLKEAL ILDYVDQ+GIPV+ TTFSS++A+C+R KSL GR++H HIR NGLENN FLR KL HMYT+CGS+EDAQ++FD + Y WNALLRG+VVSG+++Y+DVL T++EMR+L V LN Y+FS V+KSFAGA AF QGLK H LL+K G +++ +LRT LI++YFKCGK++LA RVFEEIPERD+++WGA++AGFAHNR+QRE L Y RWM+ EG+ PNSV++T ++PVIGEV AR++GQE HAYVVKTKSYSK + +QS LIDMYCKCGDM S R+VFY S ERN + WTALMSGY +NG+LEQALRS +WMQQEGF+PDVVT+ATVLPVCAQLRAL G +IHAYA+K+ F PNVS+ +SLM MYSKCGV++YS +LF+ +E RNVISWTAMI+SY E+G L EA+GV RSMQLSKHRPDSV + RML++CGE K +KLGKEIHGQ+LK+DF S+ VSAE++ MYG G ++ A LVF+AV VKGSMTWTA+I A+GYN+L + A++LF QM ++PNHFTF+ +LSIC KAG VD+AC+IF+ M R YK++ S+EH+ IM+ LL +G+ E+A+RF QM S Sbjct: 60 PFTEKDAFPSSLPLHNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFVSAELINMYGFFGDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQM---RYSPNHFTFEAILSICDKAGFVDDACRIFNSMPR-YKIEASKEHFAIMVRLLTHNGQLEKAQRFEQMSSF 681 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097647 ID=g.barbadense_cottongen_reftransV1_0097647; Name=g.barbadense_cottongen_reftransV1_0097647; organism=Gossypium barbadense; type=contig; length=2334bpback to top |