g.barbadense_cottongen_reftransV1_0097647, g.barbadense_cottongen_reftransV1_0097647 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097647
Unique Nameg.barbadense_cottongen_reftransV1_0097647
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2334
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
At05chromosomeg.barbadense_cottongen_reftransV1_0097647:1..2323 .
At05:21935774..21938100 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP115_ARATH (Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2 SV=1)

HSP 1 Score: 880.552 bits (2274), Expect = 0.000e+0
Identity = 416/629 (66.14%), Postives = 506/629 (80.45%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISE-GIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            PF ++     SLPLHSKNP  I++DIQ FARQN L+ AL ILDY++Q+GIPVN TTFS+LL +CVR KSL HG+Q+H HIR NGLE+NEFLR KL HMYT+CGS++DAQ+VFDE TS+N YSWNALLRG+V+SG+KRY DVLSTF+EMR L V+LN Y+ S V KSFAGASA RQGLK HAL +K G  NS  L+T L+++YFKCGK+ LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL   R MISE  IYPNSVILTTILPV+G+V A K+G+EVHA+V+K+K+Y +Q  + SGLID+YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGF+PDVVT+ATVLPVCA+LRA+  G EIH YA+KN F PNVS+VTSLM+MYSKCGV +Y ++LF+ LE RNV +WTAMI+ Y E+  L   I VFR M LSKHRPDSV M R+L +C +LKA+KLGKE+HG +LKK+FESIP VSA ++KMYG CG + +A   FDAV VKGS+TWTAIIEA+G N+L   AI+ F QM+S GFTPN FTF  VLSIC +AG VDEA + F++M R Y ++ SEEHY ++IELLN  GR EEA+R   M S SS
Sbjct:   58 PFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAVMSSSSS 686          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 8.620e-102
Identity = 188/563 (33.39%), Postives = 299/563 (53.11%), Query Frame = 1
Query:  454 LLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRG-SVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFI 2139
            LL  C  LK L   RQI   +  NGL    F + KL  ++   GS+++A RVF+   S     ++ +L+G + VS   +    L  F  MR   V    Y F+ +LK     +  R G + H LLVK GF       TGL  +Y KC ++  A +VF+ +PERD++ W  ++AG++ N M R AL   + M  E + P+ + + ++LP +  +    VG+E+H Y +++  +   ++I + L+DMY KCG +E+ RQ+F    ERN +SW +++  Y+ N   ++A+     M  EG KP  V+V   L  CA L  L  G  IH  +V+     NVS+V SL+ MY KC  +D +  +F  L++R ++SW AMI  +A++G   +A+  F  M+    +PD+     ++    EL      K IHG V++   +    V+  +V MY  CG +  A+L+FD +  +   TW A+I+ +G +   + A+ LF +M      PN  TF  V+S C  +GLV+   + F +M   Y +++S +HY  M++LL  +GR  EA  FI
Sbjct:   43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK---ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598          

HSP 2 Score: 215.698 bits (548), Expect = 8.305e-58
Identity = 160/613 (26.10%), Postives = 291/613 (47.47%), Query Frame = 1
Query:  313 PLHSKNPQAIYKDIQAFARQNKLKEALAI---LDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRY-LDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQ---GLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNA------KLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLS-ICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLN 2103
            P+ SK     +  ++ FA+ + L +AL     + Y D + +  N   F+ LL  C     L  G++IH  +  +G   + F    L +MY  C  + +A++VFD     +  SWN ++ G   +G  R  L+++ +  E      NL   +F T++      SA R    G + H   ++ GF +   + T L+++Y KCG ++ A ++F+ + ER+++ W ++I  +  N   +EA+   + M+ EG+ P  V +   L    ++   + G+ +H   V+     + +S+ + LI MYCKC ++++   +F     R  +SW A++ G+  NGR   AL     M+    KPD  T  +V+   A+L   +H   IH   +++C   NV + T+L+ MY+KCG +  +  +F+ +  R+V +W AMI+ Y   G    A+ +F  MQ    +P+ V    +++ C     ++ G +    ++K+++    S+     MV + G  G ++ A        V  AV V G+M     I  H   +  E A     ++      P+   + V+L+ I R A + ++  Q+   M R+   K      C M+E+ N
Sbjct:   94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN---FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE-----NLKP-SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL-GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI--HKNVNFAEKAAERLFEL-----NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPG---CSMVEIKN 685          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 1.419e-100
Identity = 187/599 (31.22%), Postives = 327/599 (54.59%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHR--PDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            ++ F     L+ A+ +L    +  I  +P T  S+L  C   KSL  G+++   IR NG   +  L +KL+ MYT+CG +++A RVFDE     A  WN L+     SG   +   +  F +M S  V ++ YTFS V KSF+   +   G + H  ++K GF   + +   L+  Y K  ++  A +VF+E+ ERD+I W ++I G+  N +  + L+    M+  GI  +   + ++     +     +G+ VH+  VK   +S++    + L+DMY KCGD++S + VF    +R+ +S+T++++GY   G   +A++    M++EG  PDV TV  VL  CA+ R L+ G  +H +  +N    ++ +  +LM MY+KCG +  +  +F+ +  +++ISW  +I  Y+++    EA+ +F ++ L + R  PD   +A +L  C  L A   G+EIHG +++  + S   V+  +V MY  CG +  A ++FD +  K  ++WT +I  +G +   + AI+LF+QM   G   +  +F  +L  C  +GLVDE  + F++M  + K++ + EHY  ++++L  +G   +A RFI+
Sbjct:   68 LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD--FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA-CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 1.380e-93
Identity = 191/634 (30.13%), Postives = 326/634 (51.42%), Query Frame = 1
Query:  301 SPSLPL-HSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTT--FSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAK-LAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAG---ASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQE-GFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQ-----LSKH------RPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQM 2145
            +PS+ +  S++P+     +++  R N L+EA  +L YVD   + + P    F +LL +   L+ +  G+QIHAH+   G   +    A  L ++Y  CG      +VFD  +  N  SWN+L+  S +   +++   L  F  M    V  + +T  +V+ + +          G + HA  ++ G +NS ++ T L+ +Y K GK+  +  +      RD++ W  V++    N    EAL Y R M+ EG+ P+   ++++LP    +   + G+E+HAY +K  S  +   + S L+DMYC C  + SGR+VF    +R    W A+++GY  N   ++AL   + M++  G   +  T+A V+P C +  A +    IH + VK     +  +  +LM MYS+ G +D ++++F  +E R++++W  MI  Y  S    +A+ +   MQ     +SK       +P+S+ +  +L  C  L A+  GKEIH   +K +  +  +V + +V MY  CG +  ++ VFD +  K  +TW  II A+G +   + AI L   M+  G  PN  TF  V + C  +G+VDE  +IF VM   Y V+ S +HY  +++LL  +GR +EA + + M
Sbjct:   51 APSIFISQSRSPEWWIDLLRSKVRSNLLREA--VLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI--SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679          

HSP 2 Score: 105.145 bits (261), Expect = 8.486e-22
Identity = 68/265 (25.66%), Postives = 124/265 (46.79%), Query Frame = 1
Query: 1210 SGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCF-FPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGEL---KAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992
            SG    + S  R+   W  L+   + +  L +A+ + V M   G KPD      +L   A L+ +  G +IHA+  K  +   +V++  +L+ +Y KCG      K+F+ +  RN +SW ++I S         A+  FR M      P S  +  ++  C  L   + + +GK++H   L+K  E    +   +V MYG  G ++++K++  +   +  +TW  ++ +   N+    A+    +M+ +G  P+ FT   VL  C
Sbjct:   49 SGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 1.486e-90
Identity = 176/614 (28.66%), Postives = 324/614 (52.77%), Query Frame = 1
Query:  325 KNPQAIYKDIQAFARQNKLKEALAILDYVDQQG-IPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIY-PNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLR--ALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEAR-NVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFI-QMK 2148
            K  + +   I +  + N  +EAL   D+  +     +   T+ SL+ +C   +SL  GR+IH HI  +  + +  L   +  MY  CGS+ DA+ VFD     N  S+ +++ G   +G+    + +  + +M    +  +++ F +++K+ A +S    G + HA ++K    +  + +  LI +Y +  ++  A RVF  IP +D+I W ++IAGF+    + EAL++ + M+S G++ PN  I  + L     +     G ++H   +K++     ++  S L DMY +CG + S R+VF      +  SW  +++G  +NG  ++A+     M+  GF PD +++ ++L  CAQ +  AL+ GM+IH+Y +K  F  ++++  SL+ MY+ C  L     LF       + +SW  ++ +  +     E + +F+ M +S+  PD + M  +L  C E+ ++KLG ++H   LK        +   ++ MY  CG +  A+ +FD++  +  ++W+ +I  +  +   E A+ LF +M S G  PNH TF  VL+ C   GLV+E  ++++ M  ++ +  ++EH   +++LL  +GR  EAERFI +MK
Sbjct:   29 KTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGA--EAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS-LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMK 637          

HSP 2 Score: 167.548 bits (423), Expect = 7.354e-42
Identity = 139/535 (25.98%), Postives = 232/535 (43.36%), Query Frame = 1
Query:  433 NPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLD-VLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPER-DIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWT-----AMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKD-FESIPSVSAEMVKMYGACGLMSNAKLV------FDAVRVKGSMTWTAIIEA-HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992
            N   F S L +C  L    +G QIH     + L  N      L  MY  CG +  A+RVFD+    +  SWN ++ G   +G   Y D  +S FS+MRS     +  +  ++L +     A  QG++ H+ ++K+GF+    +   L+ +Y  C  +     +FE+     D + W  ++     +    E L   + M+     P+ + +  +L    E+ + K+G +VH Y +KT    +Q  I++GLIDMY KCG +   R++F     R+ +SW+ L+ GY  +G  E+AL     M+  G +P+ VT   VL  C+ +                                   G+++  LKL+  ++  + IS T      +++  A +G L EA      M+L    PD VV   +L+ C     + L ++    +LK D F S   V   +  M+ + G   NA L+       D  ++ G  +W  I +  H +      A  +FH    D +T  H  +  +L  C
Sbjct:  269 NEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG---YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF-IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHV-----------------------------------GLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL---EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVL--LCSMHASSGNWENAALLRSSMKKHDVKKIPGQ-SWIEIEDKIHIF-----FAEDIFHPERDDIYTVLHNIWSQMLDEC 753          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 1.280e-89
Identity = 174/594 (29.29%), Postives = 304/594 (51.18%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLD-VLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMIS-DGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEA 2127
            I +F R   L +ALA    +   G+  + +TF  L+ +CV LK+      +   + + G++ NEF+ + L   Y   G I+   ++FD     +   WN +L G    G    LD V+  FS MR   ++ N  TF  VL   A       G++ H L+V  G      ++  L+ +Y KCG+   A ++F  +   D + W  +I+G+  + +  E+L +   MIS G+ P+++  +++LP + +    +  +++H Y+++  S S  + + S LID Y KC  +   + +F      + + +TA++SGY+ NG    +L    W+ +    P+ +T+ ++LPV   L AL  G E+H + +K  F    +I  +++ MY+KCG ++ + ++F  L  R+++SW +MI   A+S     AI +FR M +S    D V ++  L+ C  L +   GK IHG ++K    S     + ++ MY  CG +  A  VF  ++ K  ++W +II A G +   + ++ LFH+M+   G  P+  TF  ++S C   G VDE  + F  MT  Y ++  +EHY  +++L   +GR  EA
Sbjct:  110 ISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA---LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699          

HSP 2 Score: 219.935 bits (559), Expect = 4.513e-59
Identity = 127/521 (24.38%), Postives = 256/521 (49.14%), Query Frame = 1
Query:  436 PTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFD--ECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992
            P   S LL +C     L  G+Q+HA +  N +  + +   ++  MY  CGS  D  ++F   +   ++   WN+++   V +G       L+ + +M    V+ +  TF  ++K+      F+        +   G   +  + + LI+ Y + GKI +  ++F+ + ++D ++W  ++ G+A        +     M  + I PN+V    +L V        +G ++H  VV       + SI++ L+ MY KCG  +   ++F      + ++W  ++SGY+ +G +E++L     M   G  PD +T +++LP  ++   L +  +IH Y +++    ++ + ++L+  Y KC  +  +  +F+   + +V+ +TAMI  Y  +G   +++ +FR +   K  P+ + +  +L + G L A+KLG+E+HG ++KK F++  ++   ++ MY  CG M+ A  +F+ +  +  ++W ++I     +D    AI +F QM   G   +  +    LS C
Sbjct:   35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN--QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV-VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.651e-89
Identity = 162/519 (31.21%), Postives = 288/519 (55.49%), Query Frame = 1
Query:  589 IEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWM-QQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142
            +EDA ++FDE    +A+ WN +++G    G   Y++ +  +S M    V  + +T+  V+KS AG S+  +G K HA+++K GF++   +   LI LY K G    A +VFEE+PERDI+ W ++I+G+        +L   + M+  G  P+     + L     V++ K+G+E+H + V+++  +  + + + ++DMY K G++    ++F    +RN ++W  ++  Y  NGR+  A      M +Q G +PDV+T   +LP  A L     G  IH YA++  F P++ + T+L+ MY +CG L  +  +F+ +  +NVISW ++I +Y ++G    A+ +F+ +  S   PDS  +A +L    E  ++  G+EIH  ++K  + S   +   +V MY  CG + +A+  F+ + +K  ++W +II A+  +     ++ LF +MI+    PN  TF  +L+ C  +G+VDE  + F  M R+Y +    EHY  M++L+  +G F  A+RF++
Sbjct:   80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGL--YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592          

HSP 2 Score: 201.445 bits (511), Expect = 3.553e-53
Identity = 145/574 (25.26%), Postives = 278/574 (48.43%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGF-INSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHN-RMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVR-VKGSMTWTAIIEA---HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRK 2049
            I+ F       EA+     +   G+  +  T+  ++ S   + SL  G++IHA +   G  ++ ++   L  +Y   G   DA++VF+E    +  SWN+++ G +  G       L  F EM       + ++  + L + +   + + G + H   V+        M+ T ++++Y K G++  A R+F  + +R+I+ W  +I  +A N R+    L + +     G+ P+ +    +LP      A   G+ +H Y ++ + +   + +++ LIDMY +CG ++S   +F    E+N ISW ++++ Y+ NG+   AL     +      PD  T+A++LP  A+  +L+ G EIHAY VK+ ++ N  I+ SL+ MY+ CG L+ + K FN +  ++V+SW ++I +YA  G    ++ +F  M  S+  P+    A +L  C     +  G E + + +K+++   P +     M+ + G  G  S AK   + +  V  +  W +++ A   H    + E A     +M  D    N   + ++L++  +AG  ++  +I  +M  K
Sbjct:  102 IKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDG--FSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMR-RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHD----NTGCYVLLLNMYAEAGRWEDVNRIKLLMESK 663          

HSP 3 Score: 68.1662 bits (165), Expect = 2.001e-10
Identity = 42/181 (23.20%), Postives = 88/181 (48.62%), Query Frame = 1
Query: 1456 NVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEG--AISLFHQMISDGFTPNHFTFKVVLSIC 1992
            N   +T  +  ++   +++ +L+LF+ +   +   W  MI+ +   G   EA+  +  M  +  + D+     ++     + +++ GK+IH  V+K  F S   V   ++ +Y   G   +A+ VF+ +  +  ++W ++I   GY  L +G  ++ LF +M+  GF P+ F+    L  C
Sbjct:   63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS--GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 1.914e-89
Identity = 174/563 (30.91%), Postives = 303/563 (53.82%), Query Frame = 1
Query:  472 RLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMR-SLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYP-NSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154
            R  S++H  Q HA I  +G  N+  L  KL    +  G+I  A+ +F      + + +N L+RG  V+        LS F+ +R S  +  N  T++  + + +G    R G   H   V  G  +  +L + ++++YFK  +++ A +VF+ +PE+D ILW  +I+G+  N M  E++   R +I+E     ++  L  ILP + E+   ++G ++H+   KT  YS    + +G I +Y KCG ++ G  +F    + + +++ A++ GY SNG  E +L     +   G +    T+ +++PV   L  +     IH Y +K+ F  + S+ T+L  +YSK   ++ + KLF+    +++ SW AMI  Y ++G   +AI +FR MQ S+  P+ V +  +L+ C +L A+ LGK +H  V   DFES   VS  ++ MY  CG ++ A+ +FD +  K  +TW  +I  +G +   + A+++F++M++ G TP   TF  VL  C  AGLV E  +IF+ M  +Y  + S +HY  M+++L  +G  + A +FI+  S+
Sbjct:   29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPH--SSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY-VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585          

HSP 2 Score: 216.468 bits (550), Expect = 4.751e-58
Identity = 140/489 (28.63%), Postives = 241/489 (49.28%), Query Frame = 1
Query:  433 NPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEM-RSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKK-DFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVK-GSMTWTAIIEA 1884
            N +T++  +++    +    GR IH     +G ++   L + +  MY     +EDA++VFD     +   WN ++ G      + Y++ +  F ++       L+  T   +L + A     R G++ H+L  K G  +   + TG I LY KCGKIK+   +F E  + DI+ + A+I G+  N     +L+  + ++  G    S  L +++PV G +    +   +H Y +K+ ++    S+ + L  +Y K  ++ES R++F  S E++  SW A++SGY  NG  E A+     MQ+  F P+ VT+  +L  CAQL AL+ G  +H       F  ++ + T+L+ MY+KCG +  + +LF+ +  +N ++W  MI  Y   G   EA+ +F  M  S   P  V    +L  C     +K G EI   ++ +  FE  PSV   A MV + G  G +  A    +A+ ++ GS  W  ++ A
Sbjct:  118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG--YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKS-NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE--PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598          

HSP 3 Score: 174.866 bits (442), Expect = 2.822e-44
Identity = 115/418 (27.51%), Postives = 197/418 (47.13%), Query Frame = 1
Query:  757 STVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALN-YARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEG-FKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAG 2004
            +T L  F  +++     + HA ++ +GF N   L T L +     G I  A  +F  +   D+ L+  ++ GF+ N     +L+ +A    S  + PNS      +         + G+ +H   V       +L + S ++ MY K   +E  R+VF    E++ I W  ++SGY  N    ++++    +  E   + D  T+  +LP  A+L+ L  GM+IH+ A K   + +  ++T  + +YSKCG +     LF      +++++ AMI  Y  +G    ++ +F+ + LS  R  S  +  ++ + G L  I     IHG  LK +F S  SVS  +  +Y     + +A+ +FD    K   +W A+I  +  N L E AISLF +M    F+PN  T   +LS C + G
Sbjct:   21 NTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV-VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434          

HSP 4 Score: 149.443 bits (376), Expect = 6.994e-36
Identity = 101/403 (25.06%), Postives = 188/403 (46.65%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAIL-DYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKA-HALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGME-----IHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGL 1539
            I  + +     E++ +  D +++    ++ TT   +L +   L+ L  G QIH+     G  +++++      +Y+ CG I+    +F E    +  ++NA++ G   +G       LS F E+      L     S+ L S    S     + A H   +K  F++ + + T L  +Y K  +I+ A ++F+E PE+ +  W A+I+G+  N +  +A++  R M      PN V +T IL    ++ A  +G+ VH  +V++  +   + + + LI MY KCG +   R++F    ++N ++W  ++SGY  +G+ ++AL     M   G  P  VT   VL  C+    +  G E     IH Y     F P+V     ++ +  + G L  +L+    +
Sbjct:  192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL--SLSLFKELMLSGARLR----SSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG----FEPSVKHYACMVDILGRAGHLQRALQFIEAM 583          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 2.401e-88
Identity = 165/571 (28.90%), Postives = 297/571 (52.01%), Query Frame = 1
Query:  445 FSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNL--NEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAV----RVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFI 2139
            + SLL      +S++  + +H H+ T G  +   L + L+  Y  CG I  A+++F+E   ++  S+N ++R  V  G   Y D +S F  M S  V    + YT+  V K+     + + GL  H  +++  F     ++  L+ +Y   GK+++A  VF+ +  RD+I W  +I+G+  N    +AL    WM++E +  +   + ++LPV G +   ++G+ VH  +V+ K    ++ +++ L++MY KCG M+  R VF     R+ I+WT +++GY  +G +E AL     MQ EG +P+ VT+A+++ VC     +N G  +H +AV+   + ++ I TSL+ MY+KC  +D   ++F+G    +   W+A+I    ++  + +A+G+F+ M+     P+   +  +L     L  ++    IH  + K  F S    +  +V +Y  CG + +A  +F+ +    + K  + W A+I  +G +     A+ +F +M+  G TPN  TF   L+ C  +GLV+E   +F  M   YK      HY  +++LL  +GR +EA   I
Sbjct:   18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHIL-STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGL--YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLI 584          

HSP 2 Score: 207.994 bits (528), Expect = 8.824e-56
Identity = 125/461 (27.11%), Postives = 229/461 (49.67%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPT--TFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLE----ARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLG 1716
            I+ + R+    +A+++   +  +G+   P   T+  +  +   LKS+  G  +H  I  +    +++++  L  MY + G +E A+ VFD   + +  SWN ++ G   +G     D L  F  M + +V+L+  T  ++L           G   H L+ +    +   ++  L+ +Y KCG++  A  VF+ +  RD+I W  +I G+  +     AL   R M  EG+ PN+V + +++ V G+      G+ +H + V+ + YS  + I++ LI MY KC  ++   +VF  + + +   W+A+++G + N  +  AL     M++E  +P++ T+ ++LP  A L  L   M IH Y  K  F  ++   T L+ +YSKCG L+ + K+FNG++    +++V+ W A+I  Y   G    A+ VF  M  S   P+ +     LN C     ++ G
Sbjct:   87 IRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMN--DALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS-DIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544          

HSP 3 Score: 154.066 bits (388), Expect = 1.054e-37
Identity = 93/368 (25.27%), Postives = 169/368 (45.92%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGE----RNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKN 1443
            I  + R   + +AL + D++  + + ++  T  S+L  C  LK L  GR +H  +    L +   ++  L +MY  CG +++A+ VFD     +  +W  ++ G    G     + L     M+   V  N  T ++++     A     G   H   V+    +  ++ T LI +Y KC ++ L  RVF    +     W A+IAG   N +  +AL   + M  E + PN   L ++LP    +   +    +H Y+ KT  +   L   +GL+ +Y KCG +ES  ++F    E    ++ + W AL+SGY  +G    AL+  + M + G  P+ +T  + L  C+    +  G+ +  + +++
Sbjct:  190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE--NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEH 554          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP303_ARATH (Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 1.510e-82
Identity = 167/600 (27.83%), Postives = 298/600 (49.67%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALL----RGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQL-SKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERF 2136
            I   +     K+ L+    +    +  +  TF SLL +C  L+ L+ G  IH  +  NG  ++ ++ + L ++Y   G +  A++VF+E    +   W A++    R  +V       +  S  +EMR   +     T   +L+  +G     Q    H   V YGF     +   ++ LY KC  +  A  +F+++ +RD++ W  +I+G+A      E L     M  +G+ P+       L V G +   ++G+ +H  +VKT  +   + +++ LI MY KCG  E+  +V      ++ + WT ++SG +  GR E+AL     M Q G       +A+V+  CAQL + + G  +H Y +++ +  +   + SL+ MY+KCG LD SL +F  +  R+++SW A+I  YA++  L +A+ +F  M+  +  + DS  +  +L  C    A+ +GK IH  V++        V   +V MY  CG +  A+  FD++  K  ++W  +I  +G++   + A+ ++ + +  G  PNH  F  VLS C   G+V +  +IFS M R + V+ + EH   +++LL  + R E+A +F
Sbjct:   18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG------EACSLVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT-GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKF 607          

HSP 2 Score: 110.538 bits (275), Expect = 1.191e-23
Identity = 74/322 (22.98%), Postives = 151/322 (46.89%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDV---LSTFSEMRSLAV-NLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTA-LMSGYISNGRLE 1302
            I    R  + ++AL +   + Q G  ++    +S++ASC +L S   G  +H ++  +G   +      L  MY  CG ++ +  +F+     +  SWNA     ++SG  + +D+   L  F EM+   V  ++ +T  ++L++ + A A   G   H ++++      S++ T L+++Y KCG ++ A R F+ I  +D++ WG +IAG+  +     AL      +  G+ PN VI   +L         + G ++ + +V+           + ++D+ C+   +E   + +  +  R +I     ++    +NG+ E
Sbjct:  318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNA-----IISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTE 634          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: K4CFF8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc07g052590.1 PE=4 SV=1)

HSP 1 Score: 890.567 bits (2300), Expect = 0.000e+0
Identity = 411/617 (66.61%), Postives = 505/617 (81.85%), Query Frame = 1
Query:  310 LPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            L +H+KNP AIYKDIQ FA QNKLKEAL ILDY+D +GIPVNPTTF+SL+A+CVRLKSLT  + +H H+  NGLENNEFL+ K+ +MY +CGSIEDA++VFD+    + Y WNALLRG+VV G  +Y +VL TFS+MR L V LN Y+FS ++KSFAGASA  QGLK H LL+K GF+ S ++RT LI++YFKCGK++LAHRVFEE+ ERD+++WGA+IAGFAHN+ QREAL Y R MI EG+  NSVILTTILPVIGE  A K+G+EVHAYV+KTK YSKQL IQSGL+DMY KCGD+ +GR+VFY S ERNAISWTAL+SGYI NGRLEQALRS++WMQQEGFKPD+VTVATVLPVC +L+ L +G EIHAYAVKN F PN S+ T LM+MYSKCG+L YS ++F+ +  RNVISWTAM++SY +SGCL EA+GVFRSMQLSKHR DSV M R+L +CG+L+ +KLG+EIHGQ+LKKD  S+P VSAE+VKMYG+CG +  ++L FD + +KGSMTWTAIIEA+G +     AI+ F QMIS GF PNHFTFKVVLSIC KAG  DE CQ F++MTRKYK+K SE+HY  +I LL+  G +EEAE+F+ +K  S+
Sbjct:   58 LSVHTKNPHAIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASLIAACVRLKSLTSAKIVHTHVIINGLENNEFLQTKVVNMYAACGSIEDAKKVFDKMPVRSVYPWNALLRGNVVLGGSKYGEVLGTFSDMRGLGVELNVYSFSCLIKSFAGASALFQGLKTHGLLIKNGFLGSDIVRTSLIDMYFKCGKVRLAHRVFEEVEERDVVMWGAIIAGFAHNKRQREALEYTRLMIREGLEVNSVILTTILPVIGEARASKLGKEVHAYVIKTKEYSKQLFIQSGLVDMYSKCGDIIAGRKVFYRSKERNAISWTALISGYILNGRLEQALRSILWMQQEGFKPDLVTVATVLPVCGKLKELKYGKEIHAYAVKNGFLPNTSVSTCLMMMYSKCGLLQYSSRVFDSMAKRNVISWTAMMDSYIDSGCLEEALGVFRSMQLSKHRADSVAMGRILGVCGKLRLLKLGREIHGQILKKDIASVPFVSAELVKMYGSCGAIDKSRLSFDIIPIKGSMTWTAIIEAYGLSGQYGAAINEFKQMISKGFNPNHFTFKVVLSICEKAGFADEGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGHYEEAEKFVLLKQSST 674          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: M1CH20_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026172 PE=4 SV=1)

HSP 1 Score: 889.797 bits (2298), Expect = 0.000e+0
Identity = 414/628 (65.92%), Postives = 509/628 (81.05%), Query Frame = 1
Query:  289 KAPSSPSLP----LHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            K P   +LP    +H+KNP AIYKDIQ FA QNKLKEAL ILDY+D +GIPVNPTTF+SL+A+ VRLKSLT  + +H H+  NGLENNEFL+ K+ +MY +CGSIEDA++VFD+    + Y WNALLRG+VV G  +Y +VL TFS+MR L V LN Y+FS ++KSFAGASA  QGLK H LL+K GF+ S ++ T LI++YFKCGK++LAHRVFEE+ ERD+++WGA+IAGFAHN++QREAL Y R MI EG+  NSVILTTILPVIGE  A K+G+EVHAYV+KTK YSKQL IQSGL+DMY KCGD+ +GR+VFY S ERNAISWTAL+SGYI NGRLEQALRS++WMQQEGFKPD+VTVATVLPVC +L+ L +G EIHAYAVKN F PN S+ T LM+MYSKCG+L YS ++F+ +E RNVISWTAM++SY +SGCL EA+GVFRSMQLSKHR DSV M R+L++CG+L+ +KLG+EIHGQ+LKKD  S+P VSAE+VKMYG+CG +  +K+ FD + VKGSMTWTAIIEA+G +     AI+ F QMIS GF PNHFTFKVV SIC KAG  DE CQ F++MTRKYK+K SE+HY  +I LL+  GR EEAE+F+ +K  S+
Sbjct:   47 KYPKHNNLPNLLSVHTKNPHAIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASLIAAVVRLKSLTSAKIVHTHVIINGLENNEFLQTKVVNMYAACGSIEDAKKVFDKMPVRSVYPWNALLRGNVVLGGSKYGEVLGTFSDMRGLGVELNVYSFSCLIKSFAGASALFQGLKTHGLLIKNGFLGSEIVSTSLIDMYFKCGKVRLAHRVFEEVEERDVVMWGAMIAGFAHNKLQREALEYTRLMIKEGLEVNSVILTTILPVIGEARASKLGKEVHAYVIKTKEYSKQLFIQSGLVDMYSKCGDIVAGRKVFYGSKERNAISWTALISGYILNGRLEQALRSILWMQQEGFKPDLVTVATVLPVCGKLKELKYGKEIHAYAVKNGFLPNASVSTCLMMMYSKCGLLQYSSRVFDSMEKRNVISWTAMMDSYIDSGCLEEALGVFRSMQLSKHRADSVAMGRILSVCGKLRLLKLGREIHGQILKKDIASVPFVSAELVKMYGSCGSIDKSKVSFDLIPVKGSMTWTAIIEAYGLSGQYGAAINEFKQMISKGFNPNHFTFKVVFSICEKAGFADEGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGRIEEAEKFVLLKQSSA 674          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: D7KYV9_ARALL (Pentatricopeptide repeat-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476277 PE=4 SV=1)

HSP 1 Score: 888.256 bits (2294), Expect = 0.000e+0
Identity = 418/629 (66.45%), Postives = 508/629 (80.76%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISE-GIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            PF ++     SLPLHSKNP +I++DIQ FAR+N L++AL ILDY++Q+GIPVN TTFS+LLA+CVR KSL HG+Q+H HIR NGLE+NEF+R KL HMYT+CGS+ DAQ+VFDE TS+N YSWNALLRG+V+SG+KRY DVLSTF+EMR L V+LN Y+FS V KSFAGASA RQGLK HAL +K G  NS  L+T L+++YFKCGK+ LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL   R MISE GIYPNSVILTTILPV+G+V A K+G+EVHA+V+K K+Y +Q  + SGLID+YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGFKPDVVT+ATVLPVCA+LRA+  G EIH YA+KN F PNVS+VTSLM+MYSKCGV +Y ++LF+ LE RNV +WTAMI+ Y E+G L   I VFRSM LSKHRPDSV M R+L +C +LKA+KLGKE+HG +LKK+FESIP VSA+++KMYG CG + +A   FDAV VKGS+TWTAIIEA+GYN     AI  F QM+S GFTPN FTF  +LSIC +AG  DEA + F++M R Y +  SEEHY ++IELLN  GR EEA+R   M S SS
Sbjct:   57 PFRERDAFPSSLPLHSKNPHSIHRDIQRFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLLHGKQVHVHIRINGLESNEFIRTKLVHMYTACGSVRDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRSMISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKMKNYLEQPFVHSGLIDLYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAKIIKMYGQCGDLRSANFSFDAVVVKGSLTWTAIIEAYGYNGRFRDAIKCFEQMVSRGFTPNTFTFTAILSICSQAGFADEAYRFFNLMLRMYNLHPSEEHYSLVIELLNRFGRVEEAQRLEVMSSSSS 685          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: V4JS29_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10019712mg PE=4 SV=1)

HSP 1 Score: 886.715 bits (2290), Expect = 0.000e+0
Identity = 420/629 (66.77%), Postives = 510/629 (81.08%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMIS-EGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            PF ++     SLPLHSKNP  I++DIQ FARQNKL++AL ILDY++Q+GIPVN TTFS+LLA+CVR KSL+ G+Q+H HIR NGLENNEFL  KL HMYT+CGSI+DAQ+VFDE TS+N YSWNALLRG+V+SG++RY DVLSTF+EMR   ++LN Y+FS V KSFAGASA RQGLK HAL +K G ++S  L+T L+++YFKCGKI LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL   R MIS EGIYPNSVILTTILPV+G+V A K+G+EVHA+V+K+K+Y +Q  + SGLID YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGF+PDVVT+ATVLPVCA+LRA+  G EIH YA+KN F PNVS+VTSLM++YSKCGV +Y ++LF+ LE RNV +WTAMI+ Y E+G L   I VFRSM LSKHRPDSV M R+L +C ELKA+KLGKEIHG +LKK+FESIP VSA ++KMYG CG + +A   FDAV VKGS+TWTAIIEA+G N     AI+ F QMIS GFTPN FTF  VLSIC +AG  DEAC+ F++M R YK++ SE+HY ++IELLN  GR EEA+R   M S SS
Sbjct:   57 PFRERDAFPSSLPLHSKNPYIIHRDIQNFARQNKLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLSLGKQVHVHIRINGLENNEFLGTKLVHMYTACGSIKDAQKVFDESTSSNVYSWNALLRGTVISGKRRYQDVLSTFAEMREQGIDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLLSSVFLKTSLVDMYFKCGKIGLARRVFDEIEERDIVVWGAMIAGLAHNKRQWEALGLFRTMISQEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYLEQPFVHSGLIDFYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAVKQGKEIHCYALKNLFLPNVSLVTSLMVLYSKCGVPEYPVRLFDKLEHRNVKAWTAMIDCYVENGDLRAGIKVFRSMLLSKHRPDSVTMGRILTVCSELKALKLGKEIHGHILKKEFESIPFVSARIIKMYGGCGDLRSANFSFDAVVVKGSLTWTAIIEAYGCNGRLRDAINCFEQMISKGFTPNAFTFTAVLSICSQAGFADEACRFFNLMHRIYKLQPSEDHYSMVIELLNRFGRVEEAQRLAVMSSSSS 685          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: R0I7E0_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021470mg PE=4 SV=1)

HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0
Identity = 412/629 (65.50%), Postives = 509/629 (80.92%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISE-GIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            PF ++     SLPLHSKNP +I++DIQ+FAR+N L++AL ILDY++Q+GIPVN TTFS+LLA+CVR KSL HG+Q+H HIR NGLE+NEFLR KL HMYT+CGS++DAQ+VFDE TS+N YSWNALLRG+V+SG+KRY DVLSTF+EMR   V+LN Y+ S V KSFAGASA RQGLK HAL +K G  +S  L+T L+++YFKCGK+ LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL   R MISE GIYPNSVILTTILPV+G+V A K+G+EVHA+V+KTK+Y +Q  + SGLID+YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGF+PDVVT+ATVLPVCA+LRA+  G EIH YA+KN F PNVS+VTSLM+MYSKCGV +Y ++LF+ LE RNV +WTAMI+ Y E+G L     VFRSM LSKHRPDSV M R+L +C ELKA+KLGKE+HG +LKK+FESIP VSA ++KMYG CG + +A   FD V VKGS+TWTAIIEA+G N   + AI+ F +MIS GFTPN FTF  VLSIC +AG VDEA + F++M R Y ++ S++HY ++IE+LN  GR +EA+R   M S SS
Sbjct:   57 PFRERDAFPSSLPLHSKNPCSIHRDIQSFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLIHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFSSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKTKNYVEQPFVHSGLIDLYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVETGDLRAGFEVFRSMLLSKHRPDSVTMGRVLTVCSELKALKLGKELHGHILKKEFESIPFVSARIIKMYGQCGDLRSANFSFDTVVVKGSLTWTAIIEAYGCNGRFKDAINCFEKMISRGFTPNPFTFTAVLSICSQAGFVDEAYRFFNLMLRVYNLQPSKDHYSLVIEILNRFGRVKEAQRLEVMSSSSS 685          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: G7JEE2_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_4g006900 PE=4 SV=1)

HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0
Identity = 409/631 (64.82%), Postives = 513/631 (81.30%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNA-YSWNALLRGSVVSG--RKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPER--DIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154
            PF ++     SLPLH+KNP +IYKDI+ FARQNKL EALAILDYVDQ GIPVN TTFSSL+A+C+R  SL+ G+QIH HIR NGLE N FL  KL  MYTSCGS+EDA ++FDE    ++ Y WNALLRG+VV G  +K+Y+DV+ T+S+MR L V LN Y+FS+V+KSFA A AF QGLK HALL+K G ++S +LRT LI+LYFKCGK+KLA RVFEEIPER  D+++WG +++GF+HNR+QRE L Y +WM+ EGIYPNSVI+T +LPVIGEV  R++GQEVHA+V+KTKSY++++ +QS LIDMYCKCGD+ S R VFY S ERN + WTALMSGY S GRLEQALR+V+WMQQEGF+PDVVTVATVLP+CAQLRAL  G +IHAYA+K+ F PNVS+ +SL++MYSKCGV++YS +LF  +E RNVISWTAMI+SY E+G L EA+GV RSMQLSKHRPDSV M+RML++CGELK +K GKEIHGQ+LK+DF S+  VSAE++ MYGA G +  A LVF AV VKGSMTWTA+I A+ YN+L +GAI LF QM SD F+PN FTF+V+LS+C +AG V++A +IF++M  KYK++ S+EH+ IM+ LL   G+ E+A+RF QM S 
Sbjct:   58 PFSEEDAFPCSLPLHNKNPISIYKDIKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIRTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELPDESSVYPWNALLRGTVVFGGRKKQYIDVVKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGKVKLARRVFEEIPERERDVVVWGTMLSGFSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGYASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVEYSTRLFGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFTSVHFVSAELINMYGALGDVDKANLVFSAVPVKGSMTWTALIRAYEYNELYQGAIDLFDQMRSDRFSPNPFTFEVILSVCERAGFVNDASKIFNLMP-KYKIEASKEHFAIMVRLLTRYGQLEKAQRFAQMSSF 687          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: M5X6S9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003304mg PE=4 SV=1)

HSP 1 Score: 873.618 bits (2256), Expect = 0.000e+0
Identity = 407/584 (69.69%), Postives = 492/584 (84.25%), Query Frame = 1
Query:  400 LDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151
            +D  +QQGIPVN TTFSSL+A+CVR +S  HG+QIH HIR NGLE+N+F+R KL HMYTS GS+E AQ++FDE +S + YSWNALLRG+V+SG +RY DVL T++EMR+L + LN Y+FS+V+KSFAGASA  QGLK HALLVK GFI+SS++RT L++LYFKCGKIKLA+RVFEE  ERD+++WG +IAGFAHNR QREAL YAR M+ EGI PNSVILT+ILPVIG+V ARK+GQEVHA+V+KTKSYSKQ+ IQSGLIDMYCKCGDM+ GR+VFY S ERNAI WTALMSGY++NGR EQALRSV+WMQQEGFKPD+VTVATVLPVCA+L+ L  G EIHAYAVKNCF PNVSI++SLM+MYSKCG+  YS +LF+G+E RNVI WTAMI+SY ++GCL EA+GV RSM LSKHRPDSV  AR+L IC  LK +KLGKEIHGQVLKKDFESIP V++E+VKMYG CG + +AK  F+ + VKGSMTWTAIIEA+ YN +   AI LF +M S  FTPNHFTF+VVLSIC +AG V++A +IF +M+R YKVKVSEE Y ++I LL   GR +EA+RF+Q+ S
Sbjct:    1 MDPSNQQGIPVNATTFSSLIAACVRTRSEDHGKQIHTHIRINGLESNDFIRTKLVHMYTSFGSVEHAQQLFDESSSKSVYSWNALLRGTVISGGRRYRDVLRTYTEMRALGLELNVYSFSSVMKSFAGASALSQGLKTHALLVKNGFIDSSIVRTSLVDLYFKCGKIKLAYRVFEEFGERDVVVWGTMIAGFAHNRRQREALEYARMMVDEGIRPNSVILTSILPVIGDVGARKLGQEVHAFVLKTKSYSKQIFIQSGLIDMYCKCGDMDMGRRVFYHSKERNAICWTALMSGYVANGRPEQALRSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAVKNCFLPNVSIISSLMVMYSKCGIFKYSRRLFDGMEQRNVILWTAMIDSYIDNGCLYEALGVIRSMLLSKHRPDSVATARILTICNGLKNLKLGKEIHGQVLKKDFESIPFVASEIVKMYGHCGAVDHAKSAFNIIPVKGSMTWTAIIEAYAYNGMYRDAIDLFDEMRSKDFTPNHFTFQVVLSICDRAGFVNDASRIFHLMSRVYKVKVSEEQYSLIIGLLTRFGRVKEAQRFLQLSS 584          

HSP 2 Score: 155.221 bits (391), Expect = 1.804e-36
Identity = 100/358 (27.93%), Postives = 171/358 (47.77%), Query Frame = 1
Query:  352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHI-RTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEI 1422
            I  FA   + +EAL     +  +GI  N    +S+L     + +   G+++HA + +T       F+++ L  MY  CG ++  +RVF      NA  W AL+ G V +GR      L +   M+      +  T +TVL   A     ++G + HA  VK  F+ +  + + L+ +Y KCG  K + R+F+ + +R++ILW A+I  +  N    EAL   R M+     P+SV    IL +   +   K+G+E+H  V+K K +     + S ++ MY  CG ++  +  F     + +++WTA++  Y  NG    A+     M+ + F P+  T   VL +C +   +N    I
Sbjct:  189 IAGFAHNRRQREALEYARMMVDEGIRPNSVILTSILPVIGDVGARKLGQEVHAFVLKTKSYSKQIFIQSGLIDMYCKCGDMDMGRRVFYHSKERNAICWTALMSGYVANGRPE--QALRSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAVKNCFLPNVSIISSLMVMYSKCGIFKYSRRLFDGMEQRNVILWTAMIDSYIDNGCLYEALGVIRSMLLSKHRPDSVATARILTICNGLKNLKLGKEIHGQVLK-KDFESIPFVASEIVKMYGHCGAVDHAKSAFNIIPVKGSMTWTAIIEAYAYNGMYRDAIDLFDEMRSKDFTPNHFTFQVVLSICDRAGFVNDASRI 543          

HSP 3 Score: 92.4337 bits (228), Expect = 3.949e-16
Identity = 69/302 (22.85%), Postives = 133/302 (44.04%), Query Frame = 1
Query:  319 HSKNPQAI--YKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEV-WARKVGQEVH--AYVVKTKSYSKQLSIQSGLIDMYCKCGDME 1209
            HSK   AI     +  +    + ++AL  + ++ Q+G   +  T +++L  C  LK L  G++IHA+   N    N  + + L  MY+ CG  + ++R+FD     N   W A++   + +G     + L     M       +    + +L    G    + G + H  ++K  F +   + + ++++Y  CG +  A   F  IP +  + W A+I  +A+N M R+A++    M S+   PN      +L +     +     +  H  + V K K   +Q S+  GL+  + +  + +
Sbjct:  278 HSKERNAICWTALMSGYVANGRPEQALRSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAVKNCFLPNVSIISSLMVMYSKCGIFKYSRRLFDGMEQRNVILWTAMIDSYIDNG--CLYEALGVIRSMLLSKHRPDSVATARILTICNGLKNLKLGKEIHGQVLKKDFESIPFVASEIVKMYGHCGAVDHAKSAFNIIPVKGSMTWTAIIEAYAYNGMYRDAIDLFDEMRSKDFTPNHFTFQVVLSICDRAGFVNDASRIFHLMSRVYKVKVSEEQYSLIIGLLTRFGRVKEAQ 577          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A087HHH8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G147300 PE=4 SV=1)

HSP 1 Score: 872.078 bits (2252), Expect = 0.000e+0
Identity = 410/629 (65.18%), Postives = 508/629 (80.76%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMIS-EGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            PF ++     SLPL+SKNP +I++DIQ FARQN L+EAL ILDY++Q+GIPVN TTFS+LL +CVR KSL HG+Q+H HIR NGLE NEFL  KL HMYT+CGS++DAQ+VFDE T++N YSWNALLRG+V+SG+K+Y DVLSTF+EMR   V+LN Y+ S V KSFAGASA RQGLK HAL +K G +NS  L+T L+++YFKCGK+ LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL   R MIS EGIYPNSVI+TTILPV+G+V A K+G+EVHA+V+K+K+Y +QL + SGLID YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGFKPDVVT+ATVLPVCA+LRA+  G EIH YA+KN F PNVS++TSLM+MY+KCGV +Y ++LF+ LE RNV +WTAMI+ Y E+G L   I VFRSM LSKHRPDSV M R+L++C +LKA+KLGKEIHG +LKK+FESIP VSA ++KMYG CG + +A   FD V VKGS+TWTAIIEA+G +     AI+ F +MIS+GFTPN FTF  VLSIC +AG  DEA + F++M R YK++ SE++Y ++IELLN  GR EEA+R   M S SS
Sbjct:   51 PFKERDAFPSSLPLYSKNPYSIHRDIQKFARQNNLEEALTILDYLEQRGIPVNATTFSALLEACVRRKSLIHGKQVHVHIRINGLEKNEFLGTKLVHMYTACGSVKDAQKVFDESTNSNVYSWNALLRGTVISGKKKYQDVLSTFTEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLLNSVFLKTSLVDMYFKCGKVGLARRVFDEIEERDIVVWGAMIAGLAHNKRQWEALGLFRTMISQEGIYPNSVIVTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQLFVHSGLIDFYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLITSLMVMYAKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLLSKHRPDSVTMGRVLSVCSDLKALKLGKEIHGHILKKEFESIPFVSARIIKMYGICGDLKSANFSFDNVVVKGSLTWTAIIEAYGCSGRLREAINCFEKMISEGFTPNPFTFTAVLSICSQAGFADEAYRFFNLMHRVYKLQPSEDNYSVVIELLNRVGRVEEAQRLAVMSSSSS 679          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: V7B196_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G048400g PE=4 SV=1)

HSP 1 Score: 872.078 bits (2252), Expect = 0.000e+0
Identity = 401/626 (64.06%), Postives = 512/626 (81.79%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154
            PF +K     SLPLH+KNP  IYKDI+ FARQNKLKEAL ILDYVDQ+GIPV+ TTFS+++A+C+R KSL  GR++H HIR NGLENN FLR KL  MYTSCGS+E+AQ++F+     + Y WNALLRG+VVSG ++Y+DVL T++EMR+L V LN Y+FS V+KSFAGASAF +GLK HALL+K GF+++ +LRT LI++YFKCGK++LA  VFEEIPERD++ WGA++AGFAHN+MQ+E L Y RWM+ EG+ PNSV++   +PVIGEV AR++GQE HAYV+KTKSYSKQ+ IQS LIDMYCKCGDM S R+VFY S ERN + WTALM+GY  NG+LEQALRS +WMQQEGF+PDVVTVATVLPVCAQLRAL  G +IHAYA+K+ F PNVSI + LM+MYSKCGV++YS +LF+ +E RNVISWTAMI+S+  +G L EA+GV RSMQLSK+RPDSV + RML++CGELK +KLG+EIHGQ+LK+DF  +P VSAE++  YG+ G ++ AKLVF+AV VK S+TWTA+I+A+GYN+    AI+LF  M S   +PNHFTF  +LSIC +AG VD+AC+IF++M  KYK++ S+EH+ I+++LL  +G+ E+A+RF QM S 
Sbjct:   52 PFTEKDAFPCSLPLHNKNPIFIYKDIKRFARQNKLKEALTILDYVDQRGIPVDSTTFSAVIAACIRTKSLPQGREVHIHIRINGLENNVFLRTKLVQMYTSCGSLEEAQKLFEGLPCESVYPWNALLRGTVVSGERQYIDVLKTYAEMRALGVQLNVYSFSNVIKSFAGASAFSEGLKTHALLIKNGFVDNYILRTSLIDMYFKCGKVRLACHVFEEIPERDVVAWGAMLAGFAHNKMQKEVLEYVRWMVKEGMKPNSVVIAIAVPVIGEVCARRLGQEFHAYVLKTKSYSKQVPIQSALIDMYCKCGDMISARRVFYGSKERNVVCWTALMAGYAVNGKLEQALRSTIWMQQEGFRPDVVTVATVLPVCAQLRALEQGRQIHAYALKHWFLPNVSITSQLMMMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSFINNGHLCEALGVMRSMQLSKYRPDSVAIGRMLSVCGELKLVKLGQEIHGQILKRDFARVPFVSAELINTYGSFGDVNKAKLVFNAVPVKDSITWTALIKAYGYNEFYHDAINLFDHMRS---SPNHFTFAAILSICDRAGFVDDACRIFNLMP-KYKIEASKEHFAILVQLLTRNGQLEKAQRFEQMSSF 673          
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A078E5F9_BRANA (BnaA07g29380D protein OS=Brassica napus GN=BnaA07g29380D PE=4 SV=1)

HSP 1 Score: 865.144 bits (2234), Expect = 0.000e+0
Identity = 409/629 (65.02%), Postives = 500/629 (79.49%), Query Frame = 1
Query:  277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMIS-EGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160
            PF ++     SLPLHSKNP  I++ +Q  AR+NKL++AL ILDY++Q+GIPVN TTFS+LLA+CVR KSL HG+Q+H HIR NGLE +EFL  KL HMYT+CGSIEDAQ+VFDE +S+N YSWNALLRG+V+SG++RY DV+STF+EMR   V+LN Y+ S V KSFAGASA RQGLK HAL VK G  +S  L+T ++++YFKCGK+ LA RVF+EI ERDI+ WGA+IAG AHN+ Q EAL   R MIS EGIYPNSVI+TTILPV+G+V   K+G+EVHA+V+K+KSY +Q  + SGLID YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGFKPDVVT+ATVLPVCA+LRA+  G EIH YA+K  + PNVS+VTSLM+MYSKCGV +Y  +LF+ LE RNV +WTAMI+SY E+G L   I VFRSM LSKHRPDSV M R+L +C ELKA+KLGKEIHG +LKK+FESIP VSA ++KMYG CG + +A   FDAV VKGS+TWTAIIEA+G N     A++ F QM S+GFTPN FTF  VLSIC +AG  +EAC+ F +M + YK++ SE+ Y I+IELLN  GR EEA+R   M S SS
Sbjct:   57 PFRERDAFPSSLPLHSKNPHIIHRALQNLARRNKLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLVHGKQVHVHIRINGLEKSEFLGTKLVHMYTACGSIEDAQKVFDESSSSNVYSWNALLRGTVISGKRRYKDVVSTFAEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAVKNGLFSSDFLKTSVVDMYFKCGKVGLARRVFDEIEERDIVAWGAMIAGLAHNKRQWEALGLFRMMISQEGIYPNSVIITTILPVLGDVKGLKLGKEVHAHVLKSKSYVEQPFVHSGLIDFYCKCGDMVSGRRVFYGSKKRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAVKQGKEIHCYALKKLYLPNVSLVTSLMVMYSKCGVPEYPARLFDRLEQRNVKAWTAMIDSYVETGDLEAGIEVFRSMLLSKHRPDSVTMGRVLTVCSELKALKLGKEIHGHILKKEFESIPFVSARIIKMYGQCGDLKSANFSFDAVVVKGSLTWTAIIEAYGCNGRLRDAVNCFEQMRSEGFTPNAFTFTAVLSICSQAGFANEACRFFHLMHQTYKLQPSEDQYSIVIELLNRFGRVEEAQRLAIMSSSSS 685          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
PP115_ARATH0.000e+066.14Pentatricopeptide repeat-containing protein At1g71... [more]
PPR32_ARATH8.620e-10233.39Pentatricopeptide repeat-containing protein At1g11... [more]
PP320_ARATH1.419e-10031.22Pentatricopeptide repeat-containing protein DOT4, ... [more]
PP285_ARATH1.380e-9330.13Pentatricopeptide repeat-containing protein At3g57... [more]
PP280_ARATH1.486e-9028.66Pentatricopeptide repeat-containing protein At3g53... [more]
PP333_ARATH1.280e-8929.29Pentatricopeptide repeat-containing protein At4g21... [more]
PP350_ARATH1.651e-8931.21Pentatricopeptide repeat-containing protein At4g35... [more]
PP341_ARATH1.914e-8930.91Pentatricopeptide repeat-containing protein At4g30... [more]
PP405_ARATH2.401e-8828.90Pentatricopeptide repeat-containing protein At5g39... [more]
PP303_ARATH1.510e-8227.83Pentatricopeptide repeat-containing protein At4g04... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
K4CFF8_SOLLC0.000e+066.61Uncharacterized protein OS=Solanum lycopersicum GN... [more]
M1CH20_SOLTU0.000e+065.92Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
D7KYV9_ARALL0.000e+066.45Pentatricopeptide repeat-containing protein OS=Ara... [more]
V4JS29_EUTSA0.000e+066.77Uncharacterized protein OS=Eutrema salsugineum GN=... [more]
R0I7E0_9BRAS0.000e+065.50Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
G7JEE2_MEDTR0.000e+064.82PPR containing plant-like protein OS=Medicago trun... [more]
M5X6S9_PRUPE1.804e-3669.69Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
A0A087HHH8_ARAAL0.000e+065.18Uncharacterized protein OS=Arabis alpina GN=AALP_A... [more]
V7B196_PHAVU0.000e+064.06Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A078E5F9_BRANA0.000e+065.02BnaA07g29380D protein OS=Brassica napus GN=BnaA07g... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 491..517
e-value: 4.7E-5
score: 23.2
coord: 261..287
e-value: 0.18
score: 12.0
coord: 364..382
e-value: 0.19
score: 11.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 491..525
e-value: 4.2E-6
score: 24.6
coord: 390..424
e-value: 0.0016
score: 16.5
coord: 593..625
e-value: 3.1E-5
score: 21.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 590..636
e-value: 1.2E-7
score: 31.7
coord: 388..434
e-value: 4.5E-9
score: 36.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 625..655
score: 8.298
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 357..387
score: 5.623
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..422
score: 11.444
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 590..624
score: 9.328
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 117..151
score: 7.651
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 524..558
score: 5.842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 9.131
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 152..182
score: 5.875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 183..219
score: 7.399
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..523
score: 10.687
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 6.599
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..285
score: 6.796
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 423..457
score: 5.842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 458..488
score: 6.193
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 661..692
score: 6.204
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 82..116
score: 6.566
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 157..184
e-value: 1.2E-4
score: 20.3
coord: 461..514
e-value: 1.2E-4
score: 20.3
coord: 76..124
e-value: 1.2E-4
score: 20.3
coord: 387..405
e-value: 1.2E-4
score: 20.3
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 58..84
coord: 459..687
NoneNo IPR availablePANTHERPTHR24015:SF755SUBFAMILY NOT NAMEDcoord: 139..423
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 139..423
NoneNo IPR availablePANTHERPTHR24015:SF755SUBFAMILY NOT NAMEDcoord: 58..84
coord: 459..687

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097647 ID=g.barbadense_cottongen_reftransV1_0097647; Name=g.barbadense_cottongen_reftransV1_0097647; organism=Gossypium barbadense; type=contig; length=2334bp
TGAAAATATAATTAAAAGGATAAATGAATTATTCGAAATGAAGTTAGAAA
ACTTGGGGCTCTTAGTCTCCTCCACTCCAGCACTCTGAAAGAAGCCATGG
AAATCATCCAATTCCAATCACACTCCCTTCCATTCAGTCTTCAGCCTTCT
TCTCCAAATCCTCTCTTTTATAAAACAAAGCAATTCTGCAGAATCCAAGG
CTCCGCAAGATCCCCACCCAAACCTCCCAAAAAACCAACAAAATTTCCCC
GCAAAAGAAGGAACCCGCCTTCATTGCCCTTCTTTCAGAAAGCTCCATCT
TCCCCCTCTTTACCTCTCCACTCCAAGAACCCACAGGCCATTTACAAAGA
CATTCAAGCATTCGCTAGACAAAACAAGCTCAAAGAAGCCCTCGCTATTT
TAGACTACGTTGATCAACAAGGCATCCCTGTAAATCCCACCACCTTCTCT
TCCCTCCTTGCTTCTTGCGTTCGTTTAAAATCCTTAACCCATGGAAGGCA
AATCCACGCTCATATTCGGACCAATGGTCTCGAAAACAACGAGTTCCTAC
GTGCCAAACTTGCCCATATGTACACTTCGTGTGGTTCCATTGAAGATGCC
CAAAGGGTGTTCGATGAATGTACTAGCAACAACGCTTATTCCTGGAATGC
TTTGCTTAGAGGTAGTGTTGTATCGGGTAGAAAACGGTATTTGGATGTGC
TTTCTACGTTTTCCGAAATGAGGTCATTGGCGGTAAATTTGAACGAGTAC
ACTTTCTCTACTGTTCTTAAGAGCTTCGCCGGTGCATCAGCATTTAGACA
AGGTTTAAAGGCTCATGCCCTTTTGGTTAAATACGGTTTCATTAATAGTT
CTATGCTTAGGACTGGTTTGATCGAATTATATTTTAAATGCGGAAAGATT
AAGCTCGCTCACCGCGTGTTTGAGGAAATCCCTGAGAGAGATATTATTTT
GTGGGGGGCGGTGATTGCTGGTTTTGCACATAATAGGATGCAAAGGGAAG
CTTTGAATTATGCTAGATGGATGATAAGTGAAGGTATATATCCCAATTCT
GTTATACTCACTACGATACTTCCAGTGATTGGGGAAGTTTGGGCTCGGAA
AGTAGGCCAGGAGGTCCATGCTTATGTGGTTAAGACGAAGAGTTACTCGA
AGCAGTTGTCTATTCAGTCTGGCTTAATTGATATGTACTGCAAGTGTGGT
GATATGGAATCGGGCAGGCAAGTTTTCTATTGTTCTGGAGAAAGGAATGC
GATTTCTTGGACCGCTTTGATGTCGGGATACATATCGAATGGGAGGCTTG
AGCAGGCTTTGAGATCGGTTGTATGGATGCAGCAGGAAGGGTTTAAGCCC
GATGTTGTCACGGTTGCCACAGTTCTTCCTGTTTGTGCCCAATTGAGGGC
TCTCAATCATGGGATGGAGATTCATGCGTATGCTGTAAAGAATTGTTTCT
TTCCCAATGTATCTATTGTTACTTCCCTGATGATTATGTACTCAAAGTGT
GGTGTTTTAGATTATTCTTTGAAGTTGTTTAATGGTTTAGAGGCAAGGAA
TGTAATTTCATGGACGGCCATGATTGAGTCATATGCAGAGAGTGGATGTT
TACCTGAAGCAATCGGTGTGTTTAGGTCAATGCAGTTGTCGAAACACAGG
CCGGACTCAGTGGTAATGGCAAGGATGTTGAACATTTGCGGTGAGCTTAA
AGCTATAAAGCTTGGGAAGGAGATTCATGGACAAGTCTTGAAGAAAGATT
TCGAGTCGATTCCTTCCGTTTCAGCAGAGATGGTTAAGATGTACGGTGCT
TGTGGGTTAATGAGCAATGCAAAGTTAGTATTTGATGCAGTCCGCGTTAA
GGGTTCTATGACATGGACTGCCATTATAGAGGCTCATGGATATAATGATC
TTTGTGAAGGGGCAATCAGTCTTTTTCATCAAATGATATCTGATGGTTTC
ACTCCAAACCATTTCACTTTCAAAGTGGTATTATCGATTTGCAGAAAGGC
TGGATTAGTTGATGAGGCTTGCCAAATATTCAGTGTAATGACTCGTAAAT
ATAAAGTCAAGGTATCCGAAGAGCATTATTGTATTATGATCGAGCTTCTT
AATATGTCTGGTCGCTTTGAGGAGGCTGAAAGATTCATCCAGATGAAATC
TCTATCATCTTAAGATAAAAAAAAACAGCCTTGTCAAGTTTTAGTTTCAA
TTACACCTCACAATTTGGAGAGTCAGATTAATCTTGATCAAGTCAATTCA
GTTTTCGTATGATTTTAAATTTATTCTAAGCTCGAGTTATTGTTTTTTAT
CGTCAAATTGATTGGATTGGATGTGAGTTTTCGG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_rpt
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding