g.barbadense_cottongen_reftransV1_0097647, g.barbadense_cottongen_reftransV1_0097647 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP115_ARATH (Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2 SV=1) HSP 1 Score: 880.552 bits (2274), Expect = 0.000e+0 Identity = 416/629 (66.14%), Postives = 506/629 (80.45%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISE-GIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 PF ++ SLPLHSKNP I++DIQ FARQN L+ AL ILDY++Q+GIPVN TTFS+LL +CVR KSL HG+Q+H HIR NGLE+NEFLR KL HMYT+CGS++DAQ+VFDE TS+N YSWNALLRG+V+SG+KRY DVLSTF+EMR L V+LN Y+ S V KSFAGASA RQGLK HAL +K G NS L+T L+++YFKCGK+ LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL R MISE IYPNSVILTTILPV+G+V A K+G+EVHA+V+K+K+Y +Q + SGLID+YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGF+PDVVT+ATVLPVCA+LRA+ G EIH YA+KN F PNVS+VTSLM+MYSKCGV +Y ++LF+ LE RNV +WTAMI+ Y E+ L I VFR M LSKHRPDSV M R+L +C +LKA+KLGKE+HG +LKK+FESIP VSA ++KMYG CG + +A FDAV VKGS+TWTAIIEA+G N+L AI+ F QM+S GFTPN FTF VLSIC +AG VDEA + F++M R Y ++ SEEHY ++IELLN GR EEA+R M S SS Sbjct: 58 PFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAVMSSSSS 686
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 8.620e-102 Identity = 188/563 (33.39%), Postives = 299/563 (53.11%), Query Frame = 1 Query: 454 LLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRG-SVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFI 2139 LL C LK L RQI + NGL F + KL ++ GS+++A RVF+ S ++ +L+G + VS + L F MR V Y F+ +LK + R G + H LLVK GF TGL +Y KC ++ A +VF+ +PERD++ W ++AG++ N M R AL + M E + P+ + + ++LP + + VG+E+H Y +++ + ++I + L+DMY KCG +E+ RQ+F ERN +SW +++ Y+ N ++A+ M EG KP V+V L CA L L G IH +V+ NVS+V SL+ MY KC +D + +F L++R ++SW AMI +A++G +A+ F M+ +PD+ ++ EL K IHG V++ + V+ +V MY CG + A+L+FD + + TW A+I+ +G + + A+ LF +M PN TF V+S C +GLV+ + F +M Y +++S +HY M++LL +GR EA FI Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK---ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598 HSP 2 Score: 215.698 bits (548), Expect = 8.305e-58 Identity = 160/613 (26.10%), Postives = 291/613 (47.47%), Query Frame = 1 Query: 313 PLHSKNPQAIYKDIQAFARQNKLKEALAI---LDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRY-LDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQ---GLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNA------KLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLS-ICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLN 2103 P+ SK + ++ FA+ + L +AL + Y D + + N F+ LL C L G++IH + +G + F L +MY C + +A++VFD + SWN ++ G +G R L+++ + E NL +F T++ SA R G + H ++ GF + + T L+++Y KCG ++ A ++F+ + ER+++ W ++I + N +EA+ + M+ EG+ P V + L ++ + G+ +H V+ + +S+ + LI MYCKC ++++ +F R +SW A++ G+ NGR AL M+ KPD T +V+ A+L +H IH +++C NV + T+L+ MY+KCG + + +F+ + R+V +W AMI+ Y G A+ +F MQ +P+ V +++ C ++ G + ++K+++ S+ MV + G G ++ A V AV V G+M I H + E A ++ P+ + V+L+ I R A + ++ Q+ M R+ K C M+E+ N Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN---FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE-----NLKP-SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL-GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI--HKNVNFAEKAAERLFEL-----NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPG---CSMVEIKN 685
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 1.419e-100 Identity = 187/599 (31.22%), Postives = 327/599 (54.59%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHR--PDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142 ++ F L+ A+ +L + I +P T S+L C KSL G+++ IR NG + L +KL+ MYT+CG +++A RVFDE A WN L+ SG + + F +M S V ++ YTFS V KSF+ + G + H ++K GF + + L+ Y K ++ A +VF+E+ ERD+I W ++I G+ N + + L+ M+ GI + + ++ + +G+ VH+ VK +S++ + L+DMY KCGD++S + VF +R+ +S+T++++GY G +A++ M++EG PDV TV VL CA+ R L+ G +H + +N ++ + +LM MY+KCG + + +F+ + +++ISW +I Y+++ EA+ +F ++ L + R PD +A +L C L A G+EIHG +++ + S V+ +V MY CG + A ++FD + K ++WT +I +G + + AI+LF+QM G + +F +L C +GLVDE + F++M + K++ + EHY ++++L +G +A RFI+ Sbjct: 68 LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD--FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA-CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 318.546 bits (815), Expect = 1.380e-93 Identity = 191/634 (30.13%), Postives = 326/634 (51.42%), Query Frame = 1 Query: 301 SPSLPL-HSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTT--FSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAK-LAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAG---ASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQE-GFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQ-----LSKH------RPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQM 2145 +PS+ + S++P+ +++ R N L+EA +L YVD + + P F +LL + L+ + G+QIHAH+ G + A L ++Y CG +VFD + N SWN+L+ S + +++ L F M V + +T +V+ + + G + HA ++ G +NS ++ T L+ +Y K GK+ + + RD++ W V++ N EAL Y R M+ EG+ P+ ++++LP + + G+E+HAY +K S + + S L+DMYC C + SGR+VF +R W A+++GY N ++AL + M++ G + T+A V+P C + A + IH + VK + + +LM MYS+ G +D ++++F +E R++++W MI Y S +A+ + MQ +SK +P+S+ + +L C L A+ GKEIH +K + + +V + +V MY CG + ++ VFD + K +TW II A+G + + AI L M+ G PN TF V + C +G+VDE +IF VM Y V+ S +HY +++LL +GR +EA + + M Sbjct: 51 APSIFISQSRSPEWWIDLLRSKVRSNLLREA--VLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI--SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679 HSP 2 Score: 105.145 bits (261), Expect = 8.486e-22 Identity = 68/265 (25.66%), Postives = 124/265 (46.79%), Query Frame = 1 Query: 1210 SGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCF-FPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGEL---KAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992 SG + S R+ W L+ + + L +A+ + V M G KPD +L A L+ + G +IHA+ K + +V++ +L+ +Y KCG K+F+ + RN +SW ++I S A+ FR M P S + ++ C L + + +GK++H L+K E + +V MYG G ++++K++ + + +TW ++ + N+ A+ +M+ +G P+ FT VL C Sbjct: 49 SGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 1.486e-90 Identity = 176/614 (28.66%), Postives = 324/614 (52.77%), Query Frame = 1 Query: 325 KNPQAIYKDIQAFARQNKLKEALAILDYVDQQG-IPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIY-PNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLR--ALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEAR-NVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFI-QMK 2148 K + + I + + N +EAL D+ + + T+ SL+ +C +SL GR+IH HI + + + L + MY CGS+ DA+ VFD N S+ +++ G +G+ + + + +M + +++ F +++K+ A +S G + HA ++K + + + LI +Y + ++ A RVF IP +D+I W ++IAGF+ + EAL++ + M+S G++ PN I + L + G ++H +K++ ++ S L DMY +CG + S R+VF + SW +++G +NG ++A+ M+ GF PD +++ ++L CAQ + AL+ GM+IH+Y +K F ++++ SL+ MY+ C L LF + +SW ++ + + E + +F+ M +S+ PD + M +L C E+ ++KLG ++H LK + ++ MY CG + A+ +FD++ + ++W+ +I + + E A+ LF +M S G PNH TF VL+ C GLV+E ++++ M ++ + ++EH +++LL +GR EAERFI +MK Sbjct: 29 KTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGA--EAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS-LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMK 637 HSP 2 Score: 167.548 bits (423), Expect = 7.354e-42 Identity = 139/535 (25.98%), Postives = 232/535 (43.36%), Query Frame = 1 Query: 433 NPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLD-VLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPER-DIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWT-----AMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKD-FESIPSVSAEMVKMYGACGLMSNAKLV------FDAVRVKGSMTWTAIIEA-HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992 N F S L +C L +G QIH + L N L MY CG + A+RVFD+ + SWN ++ G +G Y D +S FS+MRS + + ++L + A QG++ H+ ++K+GF+ + L+ +Y C + +FE+ D + W ++ + E L + M+ P+ + + +L E+ + K+G +VH Y +KT +Q I++GLIDMY KCG + R++F R+ +SW+ L+ GY +G E+AL M+ G +P+ VT VL C+ + G+++ LKL+ ++ + IS T +++ A +G L EA M+L PD VV +L+ C + L ++ +LK D F S V + M+ + G NA L+ D ++ G +W I + H + A +FH D +T H + +L C Sbjct: 269 NEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG---YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF-IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHV-----------------------------------GLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL---EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVL--LCSMHASSGNWENAALLRSSMKKHDVKKIPGQ-SWIEIEDKIHIF-----FAEDIFHPERDDIYTVLHNIWSQMLDEC 753
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 1.280e-89 Identity = 174/594 (29.29%), Postives = 304/594 (51.18%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLD-VLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMIS-DGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEA 2127 I +F R L +ALA + G+ + +TF L+ +CV LK+ + + + G++ NEF+ + L Y G I+ ++FD + WN +L G G LD V+ FS MR ++ N TF VL A G++ H L+V G ++ L+ +Y KCG+ A ++F + D + W +I+G+ + + E+L + MIS G+ P+++ +++LP + + + +++H Y+++ S S + + S LID Y KC + + +F + + +TA++SGY+ NG +L W+ + P+ +T+ ++LPV L AL G E+H + +K F +I +++ MY+KCG ++ + ++F L R+++SW +MI A+S AI +FR M +S D V ++ L+ C L + GK IHG ++K S + ++ MY CG + A VF ++ K ++W +II A G + + ++ LFH+M+ G P+ TF ++S C G VDE + F MT Y ++ +EHY +++L +GR EA Sbjct: 110 ISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA---LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699 HSP 2 Score: 219.935 bits (559), Expect = 4.513e-59 Identity = 127/521 (24.38%), Postives = 256/521 (49.14%), Query Frame = 1 Query: 436 PTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFD--ECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSIC 1992 P S LL +C L G+Q+HA + N + + + ++ MY CGS D ++F + ++ WN+++ V +G L+ + +M V+ + TF ++K+ F+ + G + + + LI+ Y + GKI + ++F+ + ++D ++W ++ G+A + M + I PN+V +L V +G ++H VV + SI++ L+ MY KCG + ++F + ++W ++SGY+ +G +E++L M G PD +T +++LP ++ L + +IH Y +++ ++ + ++L+ Y KC + + +F+ + +V+ +TAMI Y +G +++ +FR + K P+ + + +L + G L A+KLG+E+HG ++KK F++ ++ ++ MY CG M+ A +F+ + + ++W ++I +D AI +F QM G + + LS C Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN--QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV-VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.651e-89 Identity = 162/519 (31.21%), Postives = 288/519 (55.49%), Query Frame = 1 Query: 589 IEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWM-QQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQ 2142 +EDA ++FDE +A+ WN +++G G Y++ + +S M V + +T+ V+KS AG S+ +G K HA+++K GF++ + LI LY K G A +VFEE+PERDI+ W ++I+G+ +L + M+ G P+ + L V++ K+G+E+H + V+++ + + + + ++DMY K G++ ++F +RN ++W ++ Y NGR+ A M +Q G +PDV+T +LP A L G IH YA++ F P++ + T+L+ MY +CG L + +F+ + +NVISW ++I +Y ++G A+ +F+ + S PDS +A +L E ++ G+EIH ++K + S + +V MY CG + +A+ F+ + +K ++W +II A+ + ++ LF +MI+ PN TF +L+ C +G+VDE + F M R+Y + EHY M++L+ +G F A+RF++ Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGL--YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592 HSP 2 Score: 201.445 bits (511), Expect = 3.553e-53 Identity = 145/574 (25.26%), Postives = 278/574 (48.43%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGF-INSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHN-RMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVR-VKGSMTWTAIIEA---HGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRK 2049 I+ F EA+ + G+ + T+ ++ S + SL G++IHA + G ++ ++ L +Y G DA++VF+E + SWN+++ G + G L F EM + ++ + L + + + + G + H V+ M+ T ++++Y K G++ A R+F + +R+I+ W +I +A N R+ L + + G+ P+ + +LP A G+ +H Y ++ + + + +++ LIDMY +CG ++S +F E+N ISW ++++ Y+ NG+ AL + PD T+A++LP A+ +L+ G EIHAY VK+ ++ N I+ SL+ MY+ CG L+ + K FN + ++V+SW ++I +YA G ++ +F M S+ P+ A +L C + G E + + +K+++ P + M+ + G G S AK + + V + W +++ A H + E A +M D N + ++L++ +AG ++ +I +M K Sbjct: 102 IKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDG--FSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMR-RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHD----NTGCYVLLLNMYAEAGRWEDVNRIKLLMESK 663 HSP 3 Score: 68.1662 bits (165), Expect = 2.001e-10 Identity = 42/181 (23.20%), Postives = 88/181 (48.62%), Query Frame = 1 Query: 1456 NVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEG--AISLFHQMISDGFTPNHFTFKVVLSIC 1992 N +T + ++ +++ +L+LF+ + + W MI+ + G EA+ + M + + D+ ++ + +++ GK+IH V+K F S V ++ +Y G +A+ VF+ + + ++W ++I GY L +G ++ LF +M+ GF P+ F+ L C Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS--GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 1.914e-89 Identity = 174/563 (30.91%), Postives = 303/563 (53.82%), Query Frame = 1 Query: 472 RLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMR-SLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYP-NSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154 R S++H Q HA I +G N+ L KL + G+I A+ +F + + +N L+RG V+ LS F+ +R S + N T++ + + +G R G H V G + +L + ++++YFK +++ A +VF+ +PE+D ILW +I+G+ N M E++ R +I+E ++ L ILP + E+ ++G ++H+ KT YS + +G I +Y KCG ++ G +F + + +++ A++ GY SNG E +L + G + T+ +++PV L + IH Y +K+ F + S+ T+L +YSK ++ + KLF+ +++ SW AMI Y ++G +AI +FR MQ S+ P+ V + +L+ C +L A+ LGK +H V DFES VS ++ MY CG ++ A+ +FD + K +TW +I +G + + A+++F++M++ G TP TF VL C AGLV E +IF+ M +Y + S +HY M+++L +G + A +FI+ S+ Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPH--SSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY-VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585 HSP 2 Score: 216.468 bits (550), Expect = 4.751e-58 Identity = 140/489 (28.63%), Postives = 241/489 (49.28%), Query Frame = 1 Query: 433 NPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEM-RSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKK-DFESIPSVS--AEMVKMYGACGLMSNAKLVFDAVRVK-GSMTWTAIIEA 1884 N +T++ +++ + GR IH +G ++ L + + MY +EDA++VFD + WN ++ G + Y++ + F ++ L+ T +L + A R G++ H+L K G + + TG I LY KCGKIK+ +F E + DI+ + A+I G+ N +L+ + ++ G S L +++PV G + + +H Y +K+ ++ S+ + L +Y K ++ES R++F S E++ SW A++SGY NG E A+ MQ+ F P+ VT+ +L CAQL AL+ G +H F ++ + T+L+ MY+KCG + + +LF+ + +N ++W MI Y G EA+ +F M S P V +L C +K G EI ++ + FE PSV A MV + G G + A +A+ ++ GS W ++ A Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG--YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKS-NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE--PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598 HSP 3 Score: 174.866 bits (442), Expect = 2.822e-44 Identity = 115/418 (27.51%), Postives = 197/418 (47.13%), Query Frame = 1 Query: 757 STVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALN-YARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEG-FKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAG 2004 +T L F +++ + HA ++ +GF N L T L + G I A +F + D+ L+ ++ GF+ N +L+ +A S + PNS + + G+ +H V +L + S ++ MY K +E R+VF E++ I W ++SGY N ++++ + E + D T+ +LP A+L+ L GM+IH+ A K + + ++T + +YSKCG + LF +++++ AMI Y +G ++ +F+ + LS R S + ++ + G L I IHG LK +F S SVS + +Y + +A+ +FD K +W A+I + N L E AISLF +M F+PN T +LS C + G Sbjct: 21 NTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV-VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434 HSP 4 Score: 149.443 bits (376), Expect = 6.994e-36 Identity = 101/403 (25.06%), Postives = 188/403 (46.65%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAIL-DYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKA-HALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGME-----IHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGL 1539 I + + E++ + D +++ ++ TT +L + L+ L G QIH+ G +++++ +Y+ CG I+ +F E + ++NA++ G +G LS F E+ L S+ L S S + A H +K F++ + + T L +Y K +I+ A ++F+E PE+ + W A+I+G+ N + +A++ R M PN V +T IL ++ A +G+ VH +V++ + + + + LI MY KCG + R++F ++N ++W ++SGY +G+ ++AL M G P VT VL C+ + G E IH Y F P+V ++ + + G L +L+ + Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL--SLSLFKELMLSGARLR----SSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG----FEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 2.401e-88 Identity = 165/571 (28.90%), Postives = 297/571 (52.01%), Query Frame = 1 Query: 445 FSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNL--NEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAV----RVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFI 2139 + SLL +S++ + +H H+ T G + L + L+ Y CG I A+++F+E ++ S+N ++R V G Y D +S F M S V + YT+ V K+ + + GL H +++ F ++ L+ +Y GK+++A VF+ + RD+I W +I+G+ N +AL WM++E + + + ++LPV G + ++G+ VH +V+ K ++ +++ L++MY KCG M+ R VF R+ I+WT +++GY +G +E AL MQ EG +P+ VT+A+++ VC +N G +H +AV+ + ++ I TSL+ MY+KC +D ++F+G + W+A+I ++ + +A+G+F+ M+ P+ + +L L ++ IH + K F S + +V +Y CG + +A +F+ + + K + W A+I +G + A+ +F +M+ G TPN TF L+ C +GLV+E +F M YK HY +++LL +GR +EA I Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHIL-STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGL--YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLI 584 HSP 2 Score: 207.994 bits (528), Expect = 8.824e-56 Identity = 125/461 (27.11%), Postives = 229/461 (49.67%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPT--TFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLE----ARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLG 1716 I+ + R+ +A+++ + +G+ P T+ + + LKS+ G +H I + +++++ L MY + G +E A+ VFD + + SWN ++ G +G D L F M + +V+L+ T ++L G H L+ + + ++ L+ +Y KCG++ A VF+ + RD+I W +I G+ + AL R M EG+ PN+V + +++ V G+ G+ +H + V+ + YS + I++ LI MY KC ++ +VF + + + W+A+++G + N + AL M++E +P++ T+ ++LP A L L M IH Y K F ++ T L+ +YSKCG L+ + K+FNG++ +++V+ W A+I Y G A+ VF M S P+ + LN C ++ G Sbjct: 87 IRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMN--DALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS-DIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544 HSP 3 Score: 154.066 bits (388), Expect = 1.054e-37 Identity = 93/368 (25.27%), Postives = 169/368 (45.92%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGE----RNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKN 1443 I + R + +AL + D++ + + ++ T S+L C LK L GR +H + L + ++ L +MY CG +++A+ VFD + +W ++ G G + L M+ V N T ++++ A G H V+ + ++ T LI +Y KC ++ L RVF + W A+IAG N + +AL + M E + PN L ++LP + + +H Y+ KT + L +GL+ +Y KCG +ES ++F E ++ + W AL+SGY +G AL+ + M + G P+ +T + L C+ + G+ + + +++ Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE--NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEH 554
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Match: PP303_ARATH (Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 1.510e-82 Identity = 167/600 (27.83%), Postives = 298/600 (49.67%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALL----RGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQL-SKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERF 2136 I + K+ L+ + + + TF SLL +C L+ L+ G IH + NG ++ ++ + L ++Y G + A++VF+E + W A++ R +V + S +EMR + T +L+ +G Q H V YGF + ++ LY KC + A +F+++ +RD++ W +I+G+A E L M +G+ P+ L V G + ++G+ +H +VKT + + +++ LI MY KCG E+ +V ++ + WT ++SG + GR E+AL M Q G +A+V+ CAQL + + G +H Y +++ + + + SL+ MY+KCG LD SL +F + R+++SW A+I YA++ L +A+ +F M+ + + DS + +L C A+ +GK IH V++ V +V MY CG + A+ FD++ K ++W +I +G++ + A+ ++ + + G PNH F VLS C G+V + +IFS M R + V+ + EH +++LL + R E+A +F Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG------EACSLVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT-GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKF 607 HSP 2 Score: 110.538 bits (275), Expect = 1.191e-23 Identity = 74/322 (22.98%), Postives = 151/322 (46.89%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDV---LSTFSEMRSLAV-NLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTA-LMSGYISNGRLE 1302 I R + ++AL + + Q G ++ +S++ASC +L S G +H ++ +G + L MY CG ++ + +F+ + SWNA ++SG + +D+ L F EM+ V ++ +T ++L++ + A A G H ++++ S++ T L+++Y KCG ++ A R F+ I +D++ WG +IAG+ + AL + G+ PN VI +L + G ++ + +V+ + ++D+ C+ +E + + + R +I ++ +NG+ E Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNA-----IISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTE 634
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: K4CFF8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc07g052590.1 PE=4 SV=1) HSP 1 Score: 890.567 bits (2300), Expect = 0.000e+0 Identity = 411/617 (66.61%), Postives = 505/617 (81.85%), Query Frame = 1 Query: 310 LPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 L +H+KNP AIYKDIQ FA QNKLKEAL ILDY+D +GIPVNPTTF+SL+A+CVRLKSLT + +H H+ NGLENNEFL+ K+ +MY +CGSIEDA++VFD+ + Y WNALLRG+VV G +Y +VL TFS+MR L V LN Y+FS ++KSFAGASA QGLK H LL+K GF+ S ++RT LI++YFKCGK++LAHRVFEE+ ERD+++WGA+IAGFAHN+ QREAL Y R MI EG+ NSVILTTILPVIGE A K+G+EVHAYV+KTK YSKQL IQSGL+DMY KCGD+ +GR+VFY S ERNAISWTAL+SGYI NGRLEQALRS++WMQQEGFKPD+VTVATVLPVC +L+ L +G EIHAYAVKN F PN S+ T LM+MYSKCG+L YS ++F+ + RNVISWTAM++SY +SGCL EA+GVFRSMQLSKHR DSV M R+L +CG+L+ +KLG+EIHGQ+LKKD S+P VSAE+VKMYG+CG + ++L FD + +KGSMTWTAIIEA+G + AI+ F QMIS GF PNHFTFKVVLSIC KAG DE CQ F++MTRKYK+K SE+HY +I LL+ G +EEAE+F+ +K S+ Sbjct: 58 LSVHTKNPHAIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASLIAACVRLKSLTSAKIVHTHVIINGLENNEFLQTKVVNMYAACGSIEDAKKVFDKMPVRSVYPWNALLRGNVVLGGSKYGEVLGTFSDMRGLGVELNVYSFSCLIKSFAGASALFQGLKTHGLLIKNGFLGSDIVRTSLIDMYFKCGKVRLAHRVFEEVEERDVVMWGAIIAGFAHNKRQREALEYTRLMIREGLEVNSVILTTILPVIGEARASKLGKEVHAYVIKTKEYSKQLFIQSGLVDMYSKCGDIIAGRKVFYRSKERNAISWTALISGYILNGRLEQALRSILWMQQEGFKPDLVTVATVLPVCGKLKELKYGKEIHAYAVKNGFLPNTSVSTCLMMMYSKCGLLQYSSRVFDSMAKRNVISWTAMMDSYIDSGCLEEALGVFRSMQLSKHRADSVAMGRILGVCGKLRLLKLGREIHGQILKKDIASVPFVSAELVKMYGSCGAIDKSRLSFDIIPIKGSMTWTAIIEAYGLSGQYGAAINEFKQMISKGFNPNHFTFKVVLSICEKAGFADEGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGHYEEAEKFVLLKQSST 674
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: M1CH20_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026172 PE=4 SV=1) HSP 1 Score: 889.797 bits (2298), Expect = 0.000e+0 Identity = 414/628 (65.92%), Postives = 509/628 (81.05%), Query Frame = 1 Query: 289 KAPSSPSLP----LHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 K P +LP +H+KNP AIYKDIQ FA QNKLKEAL ILDY+D +GIPVNPTTF+SL+A+ VRLKSLT + +H H+ NGLENNEFL+ K+ +MY +CGSIEDA++VFD+ + Y WNALLRG+VV G +Y +VL TFS+MR L V LN Y+FS ++KSFAGASA QGLK H LL+K GF+ S ++ T LI++YFKCGK++LAHRVFEE+ ERD+++WGA+IAGFAHN++QREAL Y R MI EG+ NSVILTTILPVIGE A K+G+EVHAYV+KTK YSKQL IQSGL+DMY KCGD+ +GR+VFY S ERNAISWTAL+SGYI NGRLEQALRS++WMQQEGFKPD+VTVATVLPVC +L+ L +G EIHAYAVKN F PN S+ T LM+MYSKCG+L YS ++F+ +E RNVISWTAM++SY +SGCL EA+GVFRSMQLSKHR DSV M R+L++CG+L+ +KLG+EIHGQ+LKKD S+P VSAE+VKMYG+CG + +K+ FD + VKGSMTWTAIIEA+G + AI+ F QMIS GF PNHFTFKVV SIC KAG DE CQ F++MTRKYK+K SE+HY +I LL+ GR EEAE+F+ +K S+ Sbjct: 47 KYPKHNNLPNLLSVHTKNPHAIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASLIAAVVRLKSLTSAKIVHTHVIINGLENNEFLQTKVVNMYAACGSIEDAKKVFDKMPVRSVYPWNALLRGNVVLGGSKYGEVLGTFSDMRGLGVELNVYSFSCLIKSFAGASALFQGLKTHGLLIKNGFLGSEIVSTSLIDMYFKCGKVRLAHRVFEEVEERDVVMWGAMIAGFAHNKLQREALEYTRLMIKEGLEVNSVILTTILPVIGEARASKLGKEVHAYVIKTKEYSKQLFIQSGLVDMYSKCGDIVAGRKVFYGSKERNAISWTALISGYILNGRLEQALRSILWMQQEGFKPDLVTVATVLPVCGKLKELKYGKEIHAYAVKNGFLPNASVSTCLMMMYSKCGLLQYSSRVFDSMEKRNVISWTAMMDSYIDSGCLEEALGVFRSMQLSKHRADSVAMGRILSVCGKLRLLKLGREIHGQILKKDIASVPFVSAELVKMYGSCGSIDKSKVSFDLIPVKGSMTWTAIIEAYGLSGQYGAAINEFKQMISKGFNPNHFTFKVVFSICEKAGFADEGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGRIEEAEKFVLLKQSSA 674
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: D7KYV9_ARALL (Pentatricopeptide repeat-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476277 PE=4 SV=1) HSP 1 Score: 888.256 bits (2294), Expect = 0.000e+0 Identity = 418/629 (66.45%), Postives = 508/629 (80.76%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISE-GIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 PF ++ SLPLHSKNP +I++DIQ FAR+N L++AL ILDY++Q+GIPVN TTFS+LLA+CVR KSL HG+Q+H HIR NGLE+NEF+R KL HMYT+CGS+ DAQ+VFDE TS+N YSWNALLRG+V+SG+KRY DVLSTF+EMR L V+LN Y+FS V KSFAGASA RQGLK HAL +K G NS L+T L+++YFKCGK+ LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL R MISE GIYPNSVILTTILPV+G+V A K+G+EVHA+V+K K+Y +Q + SGLID+YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGFKPDVVT+ATVLPVCA+LRA+ G EIH YA+KN F PNVS+VTSLM+MYSKCGV +Y ++LF+ LE RNV +WTAMI+ Y E+G L I VFRSM LSKHRPDSV M R+L +C +LKA+KLGKE+HG +LKK+FESIP VSA+++KMYG CG + +A FDAV VKGS+TWTAIIEA+GYN AI F QM+S GFTPN FTF +LSIC +AG DEA + F++M R Y + SEEHY ++IELLN GR EEA+R M S SS Sbjct: 57 PFRERDAFPSSLPLHSKNPHSIHRDIQRFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLLHGKQVHVHIRINGLESNEFIRTKLVHMYTACGSVRDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRSMISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKMKNYLEQPFVHSGLIDLYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAKIIKMYGQCGDLRSANFSFDAVVVKGSLTWTAIIEAYGYNGRFRDAIKCFEQMVSRGFTPNTFTFTAILSICSQAGFADEAYRFFNLMLRMYNLHPSEEHYSLVIELLNRFGRVEEAQRLEVMSSSSS 685
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: V4JS29_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10019712mg PE=4 SV=1) HSP 1 Score: 886.715 bits (2290), Expect = 0.000e+0 Identity = 420/629 (66.77%), Postives = 510/629 (81.08%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMIS-EGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 PF ++ SLPLHSKNP I++DIQ FARQNKL++AL ILDY++Q+GIPVN TTFS+LLA+CVR KSL+ G+Q+H HIR NGLENNEFL KL HMYT+CGSI+DAQ+VFDE TS+N YSWNALLRG+V+SG++RY DVLSTF+EMR ++LN Y+FS V KSFAGASA RQGLK HAL +K G ++S L+T L+++YFKCGKI LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL R MIS EGIYPNSVILTTILPV+G+V A K+G+EVHA+V+K+K+Y +Q + SGLID YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGF+PDVVT+ATVLPVCA+LRA+ G EIH YA+KN F PNVS+VTSLM++YSKCGV +Y ++LF+ LE RNV +WTAMI+ Y E+G L I VFRSM LSKHRPDSV M R+L +C ELKA+KLGKEIHG +LKK+FESIP VSA ++KMYG CG + +A FDAV VKGS+TWTAIIEA+G N AI+ F QMIS GFTPN FTF VLSIC +AG DEAC+ F++M R YK++ SE+HY ++IELLN GR EEA+R M S SS Sbjct: 57 PFRERDAFPSSLPLHSKNPYIIHRDIQNFARQNKLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLSLGKQVHVHIRINGLENNEFLGTKLVHMYTACGSIKDAQKVFDESTSSNVYSWNALLRGTVISGKRRYQDVLSTFAEMREQGIDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLLSSVFLKTSLVDMYFKCGKIGLARRVFDEIEERDIVVWGAMIAGLAHNKRQWEALGLFRTMISQEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYLEQPFVHSGLIDFYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAVKQGKEIHCYALKNLFLPNVSLVTSLMVLYSKCGVPEYPVRLFDKLEHRNVKAWTAMIDCYVENGDLRAGIKVFRSMLLSKHRPDSVTMGRILTVCSELKALKLGKEIHGHILKKEFESIPFVSARIIKMYGGCGDLRSANFSFDAVVVKGSLTWTAIIEAYGCNGRLRDAINCFEQMISKGFTPNAFTFTAVLSICSQAGFADEACRFFNLMHRIYKLQPSEDHYSMVIELLNRFGRVEEAQRLAVMSSSSS 685
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: R0I7E0_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021470mg PE=4 SV=1) HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0 Identity = 412/629 (65.50%), Postives = 509/629 (80.92%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISE-GIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 PF ++ SLPLHSKNP +I++DIQ+FAR+N L++AL ILDY++Q+GIPVN TTFS+LLA+CVR KSL HG+Q+H HIR NGLE+NEFLR KL HMYT+CGS++DAQ+VFDE TS+N YSWNALLRG+V+SG+KRY DVLSTF+EMR V+LN Y+ S V KSFAGASA RQGLK HAL +K G +S L+T L+++YFKCGK+ LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL R MISE GIYPNSVILTTILPV+G+V A K+G+EVHA+V+KTK+Y +Q + SGLID+YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGF+PDVVT+ATVLPVCA+LRA+ G EIH YA+KN F PNVS+VTSLM+MYSKCGV +Y ++LF+ LE RNV +WTAMI+ Y E+G L VFRSM LSKHRPDSV M R+L +C ELKA+KLGKE+HG +LKK+FESIP VSA ++KMYG CG + +A FD V VKGS+TWTAIIEA+G N + AI+ F +MIS GFTPN FTF VLSIC +AG VDEA + F++M R Y ++ S++HY ++IE+LN GR +EA+R M S SS Sbjct: 57 PFRERDAFPSSLPLHSKNPCSIHRDIQSFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLIHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFSSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKTKNYVEQPFVHSGLIDLYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVETGDLRAGFEVFRSMLLSKHRPDSVTMGRVLTVCSELKALKLGKELHGHILKKEFESIPFVSARIIKMYGQCGDLRSANFSFDTVVVKGSLTWTAIIEAYGCNGRFKDAINCFEKMISRGFTPNPFTFTAVLSICSQAGFVDEAYRFFNLMLRVYNLQPSKDHYSLVIEILNRFGRVKEAQRLEVMSSSSS 685
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: G7JEE2_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_4g006900 PE=4 SV=1) HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0 Identity = 409/631 (64.82%), Postives = 513/631 (81.30%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNA-YSWNALLRGSVVSG--RKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPER--DIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154 PF ++ SLPLH+KNP +IYKDI+ FARQNKL EALAILDYVDQ GIPVN TTFSSL+A+C+R SL+ G+QIH HIR NGLE N FL KL MYTSCGS+EDA ++FDE ++ Y WNALLRG+VV G +K+Y+DV+ T+S+MR L V LN Y+FS+V+KSFA A AF QGLK HALL+K G ++S +LRT LI+LYFKCGK+KLA RVFEEIPER D+++WG +++GF+HNR+QRE L Y +WM+ EGIYPNSVI+T +LPVIGEV R++GQEVHA+V+KTKSY++++ +QS LIDMYCKCGD+ S R VFY S ERN + WTALMSGY S GRLEQALR+V+WMQQEGF+PDVVTVATVLP+CAQLRAL G +IHAYA+K+ F PNVS+ +SL++MYSKCGV++YS +LF +E RNVISWTAMI+SY E+G L EA+GV RSMQLSKHRPDSV M+RML++CGELK +K GKEIHGQ+LK+DF S+ VSAE++ MYGA G + A LVF AV VKGSMTWTA+I A+ YN+L +GAI LF QM SD F+PN FTF+V+LS+C +AG V++A +IF++M KYK++ S+EH+ IM+ LL G+ E+A+RF QM S Sbjct: 58 PFSEEDAFPCSLPLHNKNPISIYKDIKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIRTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELPDESSVYPWNALLRGTVVFGGRKKQYIDVVKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGKVKLARRVFEEIPERERDVVVWGTMLSGFSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGYASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVEYSTRLFGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFTSVHFVSAELINMYGALGDVDKANLVFSAVPVKGSMTWTALIRAYEYNELYQGAIDLFDQMRSDRFSPNPFTFEVILSVCERAGFVNDASKIFNLMP-KYKIEASKEHFAIMVRLLTRYGQLEKAQRFAQMSSF 687
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: M5X6S9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003304mg PE=4 SV=1) HSP 1 Score: 873.618 bits (2256), Expect = 0.000e+0 Identity = 407/584 (69.69%), Postives = 492/584 (84.25%), Query Frame = 1 Query: 400 LDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKS 2151 +D +QQGIPVN TTFSSL+A+CVR +S HG+QIH HIR NGLE+N+F+R KL HMYTS GS+E AQ++FDE +S + YSWNALLRG+V+SG +RY DVL T++EMR+L + LN Y+FS+V+KSFAGASA QGLK HALLVK GFI+SS++RT L++LYFKCGKIKLA+RVFEE ERD+++WG +IAGFAHNR QREAL YAR M+ EGI PNSVILT+ILPVIG+V ARK+GQEVHA+V+KTKSYSKQ+ IQSGLIDMYCKCGDM+ GR+VFY S ERNAI WTALMSGY++NGR EQALRSV+WMQQEGFKPD+VTVATVLPVCA+L+ L G EIHAYAVKNCF PNVSI++SLM+MYSKCG+ YS +LF+G+E RNVI WTAMI+SY ++GCL EA+GV RSM LSKHRPDSV AR+L IC LK +KLGKEIHGQVLKKDFESIP V++E+VKMYG CG + +AK F+ + VKGSMTWTAIIEA+ YN + AI LF +M S FTPNHFTF+VVLSIC +AG V++A +IF +M+R YKVKVSEE Y ++I LL GR +EA+RF+Q+ S Sbjct: 1 MDPSNQQGIPVNATTFSSLIAACVRTRSEDHGKQIHTHIRINGLESNDFIRTKLVHMYTSFGSVEHAQQLFDESSSKSVYSWNALLRGTVISGGRRYRDVLRTYTEMRALGLELNVYSFSSVMKSFAGASALSQGLKTHALLVKNGFIDSSIVRTSLVDLYFKCGKIKLAYRVFEEFGERDVVVWGTMIAGFAHNRRQREALEYARMMVDEGIRPNSVILTSILPVIGDVGARKLGQEVHAFVLKTKSYSKQIFIQSGLIDMYCKCGDMDMGRRVFYHSKERNAICWTALMSGYVANGRPEQALRSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAVKNCFLPNVSIISSLMVMYSKCGIFKYSRRLFDGMEQRNVILWTAMIDSYIDNGCLYEALGVIRSMLLSKHRPDSVATARILTICNGLKNLKLGKEIHGQVLKKDFESIPFVASEIVKMYGHCGAVDHAKSAFNIIPVKGSMTWTAIIEAYAYNGMYRDAIDLFDEMRSKDFTPNHFTFQVVLSICDRAGFVNDASRIFHLMSRVYKVKVSEEQYSLIIGLLTRFGRVKEAQRFLQLSS 584 HSP 2 Score: 155.221 bits (391), Expect = 1.804e-36 Identity = 100/358 (27.93%), Postives = 171/358 (47.77%), Query Frame = 1 Query: 352 IQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHI-RTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEI 1422 I FA + +EAL + +GI N +S+L + + G+++HA + +T F+++ L MY CG ++ +RVF NA W AL+ G V +GR L + M+ + T +TVL A ++G + HA VK F+ + + + L+ +Y KCG K + R+F+ + +R++ILW A+I + N EAL R M+ P+SV IL + + K+G+E+H V+K K + + S ++ MY CG ++ + F + +++WTA++ Y NG A+ M+ + F P+ T VL +C + +N I Sbjct: 189 IAGFAHNRRQREALEYARMMVDEGIRPNSVILTSILPVIGDVGARKLGQEVHAFVLKTKSYSKQIFIQSGLIDMYCKCGDMDMGRRVFYHSKERNAICWTALMSGYVANGRPE--QALRSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAVKNCFLPNVSIISSLMVMYSKCGIFKYSRRLFDGMEQRNVILWTAMIDSYIDNGCLYEALGVIRSMLLSKHRPDSVATARILTICNGLKNLKLGKEIHGQVLK-KDFESIPFVASEIVKMYGHCGAVDHAKSAFNIIPVKGSMTWTAIIEAYAYNGMYRDAIDLFDEMRSKDFTPNHFTFQVVLSICDRAGFVNDASRI 543 HSP 3 Score: 92.4337 bits (228), Expect = 3.949e-16 Identity = 69/302 (22.85%), Postives = 133/302 (44.04%), Query Frame = 1 Query: 319 HSKNPQAI--YKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEV-WARKVGQEVH--AYVVKTKSYSKQLSIQSGLIDMYCKCGDME 1209 HSK AI + + + ++AL + ++ Q+G + T +++L C LK L G++IHA+ N N + + L MY+ CG + ++R+FD N W A++ + +G + L M + + +L G + G + H ++K F + + + ++++Y CG + A F IP + + W A+I +A+N M R+A++ M S+ PN +L + + + H + V K K +Q S+ GL+ + + + + Sbjct: 278 HSKERNAICWTALMSGYVANGRPEQALRSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAVKNCFLPNVSIISSLMVMYSKCGIFKYSRRLFDGMEQRNVILWTAMIDSYIDNG--CLYEALGVIRSMLLSKHRPDSVATARILTICNGLKNLKLGKEIHGQVLKKDFESIPFVASEIVKMYGHCGAVDHAKSAFNIIPVKGSMTWTAIIEAYAYNGMYRDAIDLFDEMRSKDFTPNHFTFQVVLSICDRAGFVNDASRIFHLMSRVYKVKVSEEQYSLIIGLLTRFGRVKEAQ 577
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A087HHH8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G147300 PE=4 SV=1) HSP 1 Score: 872.078 bits (2252), Expect = 0.000e+0 Identity = 410/629 (65.18%), Postives = 508/629 (80.76%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMIS-EGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 PF ++ SLPL+SKNP +I++DIQ FARQN L+EAL ILDY++Q+GIPVN TTFS+LL +CVR KSL HG+Q+H HIR NGLE NEFL KL HMYT+CGS++DAQ+VFDE T++N YSWNALLRG+V+SG+K+Y DVLSTF+EMR V+LN Y+ S V KSFAGASA RQGLK HAL +K G +NS L+T L+++YFKCGK+ LA RVF+EI ERDI++WGA+IAG AHN+ Q EAL R MIS EGIYPNSVI+TTILPV+G+V A K+G+EVHA+V+K+K+Y +QL + SGLID YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGFKPDVVT+ATVLPVCA+LRA+ G EIH YA+KN F PNVS++TSLM+MY+KCGV +Y ++LF+ LE RNV +WTAMI+ Y E+G L I VFRSM LSKHRPDSV M R+L++C +LKA+KLGKEIHG +LKK+FESIP VSA ++KMYG CG + +A FD V VKGS+TWTAIIEA+G + AI+ F +MIS+GFTPN FTF VLSIC +AG DEA + F++M R YK++ SE++Y ++IELLN GR EEA+R M S SS Sbjct: 51 PFKERDAFPSSLPLYSKNPYSIHRDIQKFARQNNLEEALTILDYLEQRGIPVNATTFSALLEACVRRKSLIHGKQVHVHIRINGLEKNEFLGTKLVHMYTACGSVKDAQKVFDESTNSNVYSWNALLRGTVISGKKKYQDVLSTFTEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLLNSVFLKTSLVDMYFKCGKVGLARRVFDEIEERDIVVWGAMIAGLAHNKRQWEALGLFRTMISQEGIYPNSVIVTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQLFVHSGLIDFYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLITSLMVMYAKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLLSKHRPDSVTMGRVLSVCSDLKALKLGKEIHGHILKKEFESIPFVSARIIKMYGICGDLKSANFSFDNVVVKGSLTWTAIIEAYGCSGRLREAINCFEKMISEGFTPNPFTFTAVLSICSQAGFADEAYRFFNLMHRVYKLQPSEDNYSVVIELLNRVGRVEEAQRLAVMSSSSS 679
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: V7B196_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G048400g PE=4 SV=1) HSP 1 Score: 872.078 bits (2252), Expect = 0.000e+0 Identity = 401/626 (64.06%), Postives = 512/626 (81.79%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMISEGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSL 2154 PF +K SLPLH+KNP IYKDI+ FARQNKLKEAL ILDYVDQ+GIPV+ TTFS+++A+C+R KSL GR++H HIR NGLENN FLR KL MYTSCGS+E+AQ++F+ + Y WNALLRG+VVSG ++Y+DVL T++EMR+L V LN Y+FS V+KSFAGASAF +GLK HALL+K GF+++ +LRT LI++YFKCGK++LA VFEEIPERD++ WGA++AGFAHN+MQ+E L Y RWM+ EG+ PNSV++ +PVIGEV AR++GQE HAYV+KTKSYSKQ+ IQS LIDMYCKCGDM S R+VFY S ERN + WTALM+GY NG+LEQALRS +WMQQEGF+PDVVTVATVLPVCAQLRAL G +IHAYA+K+ F PNVSI + LM+MYSKCGV++YS +LF+ +E RNVISWTAMI+S+ +G L EA+GV RSMQLSK+RPDSV + RML++CGELK +KLG+EIHGQ+LK+DF +P VSAE++ YG+ G ++ AKLVF+AV VK S+TWTA+I+A+GYN+ AI+LF M S +PNHFTF +LSIC +AG VD+AC+IF++M KYK++ S+EH+ I+++LL +G+ E+A+RF QM S Sbjct: 52 PFTEKDAFPCSLPLHNKNPIFIYKDIKRFARQNKLKEALTILDYVDQRGIPVDSTTFSAVIAACIRTKSLPQGREVHIHIRINGLENNVFLRTKLVQMYTSCGSLEEAQKLFEGLPCESVYPWNALLRGTVVSGERQYIDVLKTYAEMRALGVQLNVYSFSNVIKSFAGASAFSEGLKTHALLIKNGFVDNYILRTSLIDMYFKCGKVRLACHVFEEIPERDVVAWGAMLAGFAHNKMQKEVLEYVRWMVKEGMKPNSVVIAIAVPVIGEVCARRLGQEFHAYVLKTKSYSKQVPIQSALIDMYCKCGDMISARRVFYGSKERNVVCWTALMAGYAVNGKLEQALRSTIWMQQEGFRPDVVTVATVLPVCAQLRALEQGRQIHAYALKHWFLPNVSITSQLMMMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSFINNGHLCEALGVMRSMQLSKYRPDSVAIGRMLSVCGELKLVKLGQEIHGQILKRDFARVPFVSAELINTYGSFGDVNKAKLVFNAVPVKDSITWTALIKAYGYNEFYHDAINLFDHMRS---SPNHFTFAAILSICDRAGFVDDACRIFNLMP-KYKIEASKEHFAILVQLLTRNGQLEKAQRFEQMSSF 673
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Match: A0A078E5F9_BRANA (BnaA07g29380D protein OS=Brassica napus GN=BnaA07g29380D PE=4 SV=1) HSP 1 Score: 865.144 bits (2234), Expect = 0.000e+0 Identity = 409/629 (65.02%), Postives = 500/629 (79.49%), Query Frame = 1 Query: 277 PFFQKAPSSPSLPLHSKNPQAIYKDIQAFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLASCVRLKSLTHGRQIHAHIRTNGLENNEFLRAKLAHMYTSCGSIEDAQRVFDECTSNNAYSWNALLRGSVVSGRKRYLDVLSTFSEMRSLAVNLNEYTFSTVLKSFAGASAFRQGLKAHALLVKYGFINSSMLRTGLIELYFKCGKIKLAHRVFEEIPERDIILWGAVIAGFAHNRMQREALNYARWMIS-EGIYPNSVILTTILPVIGEVWARKVGQEVHAYVVKTKSYSKQLSIQSGLIDMYCKCGDMESGRQVFYCSGERNAISWTALMSGYISNGRLEQALRSVVWMQQEGFKPDVVTVATVLPVCAQLRALNHGMEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYSLKLFNGLEARNVISWTAMIESYAESGCLPEAIGVFRSMQLSKHRPDSVVMARMLNICGELKAIKLGKEIHGQVLKKDFESIPSVSAEMVKMYGACGLMSNAKLVFDAVRVKGSMTWTAIIEAHGYNDLCEGAISLFHQMISDGFTPNHFTFKVVLSICRKAGLVDEACQIFSVMTRKYKVKVSEEHYCIMIELLNMSGRFEEAERFIQMKSLSS 2160 PF ++ SLPLHSKNP I++ +Q AR+NKL++AL ILDY++Q+GIPVN TTFS+LLA+CVR KSL HG+Q+H HIR NGLE +EFL KL HMYT+CGSIEDAQ+VFDE +S+N YSWNALLRG+V+SG++RY DV+STF+EMR V+LN Y+ S V KSFAGASA RQGLK HAL VK G +S L+T ++++YFKCGK+ LA RVF+EI ERDI+ WGA+IAG AHN+ Q EAL R MIS EGIYPNSVI+TTILPV+G+V K+G+EVHA+V+K+KSY +Q + SGLID YCKCGDM SGR+VFY S +RNAISWTALMSGY +NGR +QALRS+VWMQQEGFKPDVVT+ATVLPVCA+LRA+ G EIH YA+K + PNVS+VTSLM+MYSKCGV +Y +LF+ LE RNV +WTAMI+SY E+G L I VFRSM LSKHRPDSV M R+L +C ELKA+KLGKEIHG +LKK+FESIP VSA ++KMYG CG + +A FDAV VKGS+TWTAIIEA+G N A++ F QM S+GFTPN FTF VLSIC +AG +EAC+ F +M + YK++ SE+ Y I+IELLN GR EEA+R M S SS Sbjct: 57 PFRERDAFPSSLPLHSKNPHIIHRALQNLARRNKLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLVHGKQVHVHIRINGLEKSEFLGTKLVHMYTACGSIEDAQKVFDESSSSNVYSWNALLRGTVISGKRRYKDVVSTFAEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAVKNGLFSSDFLKTSVVDMYFKCGKVGLARRVFDEIEERDIVAWGAMIAGLAHNKRQWEALGLFRMMISQEGIYPNSVIITTILPVLGDVKGLKLGKEVHAHVLKSKSYVEQPFVHSGLIDFYCKCGDMVSGRRVFYGSKKRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAVKQGKEIHCYALKKLYLPNVSLVTSLMVMYSKCGVPEYPARLFDRLEQRNVKAWTAMIDSYVETGDLEAGIEVFRSMLLSKHRPDSVTMGRVLTVCSELKALKLGKEIHGHILKKEFESIPFVSARIIKMYGQCGDLKSANFSFDAVVVKGSLTWTAIIEAYGCNGRLRDAVNCFEQMRSEGFTPNAFTFTAVLSICSQAGFANEACRFFHLMHQTYKLQPSEDQYSIVIELLNRFGRVEEAQRLAIMSSSSS 685 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097647 ID=g.barbadense_cottongen_reftransV1_0097647; Name=g.barbadense_cottongen_reftransV1_0097647; organism=Gossypium barbadense; type=contig; length=2334bpback to top |