g.barbadense_cottongen_reftransV1_0097525, g.barbadense_cottongen_reftransV1_0097525 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNG19_ARATH (Putative cyclic nucleotide-gated ion channel 19 OS=Arabidopsis thaliana GN=CNGC19 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.256e-38 Identity = 94/300 (31.33%), Postives = 159/300 (53.00%), Query Frame = -3 Query: 1789 ILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLL---REEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGL 2679 I++P S VQ W RVL + +A+ +DP+FF+ L++I C+ +D ++ +R+ D + ++ LQ ++AYV+ ES ++G G+LV R IA HY R F D+F++ P+PQ + I+P L REE K IL L Q++PK+Y + L+ + TG+IF S W F +NL+ +++A H G CWY+ A +RV C+ +IS+ + + S A+ + N+++ + CF +G + YGIY A+ + + +S + Y ++WG Sbjct: 158 IMNPHSKFVQVWTRVLAFSSLVAIFIDPLFFF---LLLIQQDNKCIAIDWRATKVLVSLRSITDLIFFINILLQFRLAYVAPESRIVGAGQLVDHPRKIARHYFRG--KFLLDMFIVFPIPQIMILRIIPLHLGTRREESEK---QILRATVLFQYIPKLYRLLPLLA-GQTSTGFIFESAWANFVINLLTFMLAGHAVGSCWYLSALQRVKKCMLNA------WNISADERRNLIDCARGSYASKSQRDLWRDNASV---NACFQENG-YTYGIYLKAVNLTNESSFFTRFSYSLYWGF 438 HSP 2 Score: 65.0846 bits (157), Expect = 3.141e-20 Identity = 54/199 (27.14%), Postives = 90/199 (45.23%), Query Frame = -3 Query: 289 WNFFS*VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSI-LEPGGFLGDELLSWCLRRPFID----RLP----ASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIK 858 + F V +F +D+ +LD+I +R+K Y + V +H R ++ +MVFIV G ++ S G+ + + L G G+ELL+WCL D ++P S+ C+ EAF L+ DL +T F +++++ RY S WR AA+ IQ AWR + +++ Sbjct: 552 FKFLKKVRIFSLMDESVLDSIRERLKQRTYIRSSTV---------------------LHHRGLVE------KMVFIVRGEME-----SIGEDGSVLPLSEGDVCGEELLTWCLSSINPDGTRIKMPPKGLVSNRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQGAIRYESPYWRLRAAMQIQVAWRYRKRQLQ 718 HSP 3 Score: 57.3806 bits (137), Expect = 3.141e-20 Identity = 51/118 (43.22%), Postives = 71/118 (60.17%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+ LSP+ + EV F++ I+ GLLLF LIGN+ FL + R ++ LR+RD+E WM R+LP +R+RVR E TW G E E +PD L+RDI+R+L +KKV Sbjct: 442 STLAGNLSPSYSVGEVFFTMGIIGLGLLLFARLIGNMHNFLQSLDRRRMEMMLRKRDVEQWMSHRRLPEDIRKRVREVERYTWAATRGVNEELLFENMPDDLQRDIRRHL-FKFLKKV 558
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.563e-38 Identity = 65/186 (34.95%), Postives = 101/186 (54.30%), Query Frame = -3 Query: 289 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKR--SQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIK 840 VPLF+++D+ +LD IC+R+KP ++++ ++REGDPV M+FI+ GR++ + G G S+L+ G F GDELL+W L LP+S+ T + EAF L A++L+++ FR R + Q++ T R+YS WR+WAA +Q AWR Y + K Sbjct: 512 VPLFENMDERLLDAICERLKPCLFTEKS---------------------------YLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFR-RLHSRQVQHTFRFYSQQWRTWAACFMQAAWRRYIKRKK 669 HSP 2 Score: 65.4698 bits (158), Expect = 1.563e-38 Identity = 52/118 (44.07%), Postives = 76/118 (64.41%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+ G L ++ P EV FSI + + GLLLF LLIGN+Q +L + ++++++RRD E WM R LP LR+RVR ++ W G +E ++ LP LRRDIKR+LCL L+++V Sbjct: 395 STLGQGLETSTYPGEVIFSITLAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRV 512 HSP 3 Score: 138.658 bits (348), Expect = 3.192e-32 Identity = 95/310 (30.65%), Postives = 154/310 (49.68%), Query Frame = -3 Query: 1780 KILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYL---SLANMLKMS----RCGGNSTLMTKSFCFDPDGIFRYGIYEPALP--VISSNSLAVKILYPIFWGLLNL 2682 KI DP+ + N++ + + +A++VDP+F Y L I+D CV +D +LA IVT +RT +D +L+H+ L+ + AYV+ S V G G+LV D IA Y++ F D+ +LPVPQ + W + R L I L Q++P+ L +++ G + W G L+ Y++ASH+ G WY+LA +R C + C + C + + C NQ + + + +K+S +C N D + F +GIY AL ++SS + K + ++WGL NL Sbjct: 102 KIFDPQDKFLLLCNKLFVASCILAVSVDPLFLY---LPFINDKAKCVGIDRKLAIIVTTIRTVIDSFYLFHMALRFRTAYVAPSSRVFGRGELVIDPAQIAKRYLQQY--FIIDLLSVLPVPQIIVWRFL-YTSRGANVLATKQALRYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLALERNNDCWSKACHNNQNC----TRNFLFCGNQNMKGYAAWDNIKVSYLQLKCPVNVPE-------DEEPPFDFGIYLRALSSGIVSSKNFVSKYFFCLWWGLQNL 394
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.600e-38 Identity = 106/375 (28.27%), Postives = 175/375 (46.67%), Query Frame = -3 Query: 1780 RDGPVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSS----LFPMEATSDPIKNLTRARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFCFDPD-GIFRYGIYEPALP--VISSNSLAVKILYPIFWGLLNL 2883 + SS +E ++ +F T S+ + ++ SS LF S K G KILDP+ +QRWN++ ++A IA+++DP+FFY + +IDD C+ +D ++ +V+R+ D ++ H+ Q + +++ S V G G LV D R IA Y+ S F D+ +LP+PQ V +I+P + + ++F Q++P+ L + + + +G + + W G NL Y++ASHV G WY+ + +R C +Q CER+ IS C + GGN+ L P+ +F +GI+ AL V+ S K Y +WGL NL Sbjct: 15 KSDKTSSDVEYSGKNEIQTGIFQRT-ISSISDKFYRSFESSSARIKLFKRSYKSYSFKEAVSKGI--GSTHKILDPQGPFLQRWNKIFVLACIIAVSLDPLFFY---VPIIDDAKKCLGIDKKMEITASVLRSFTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIAKRYLSS--HFIIDILAVLPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFF-QYIPRFIRIYPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPCISKLL---YCDPE-----------TAGGNAFLNESCPIQTPNTTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNL 366 HSP 2 Score: 117.087 bits (292), Expect = 4.904e-37 Identity = 64/181 (35.36%), Postives = 97/181 (53.59%), Query Frame = -3 Query: 304 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVK--RSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCY 840 VP+F+ +D+ +LD +CDR++P++Y+++ I+REGDPV M+FI+ G++ + G G + + L G F G+ELL+W L LP S+ T + EAF L A+DL+++ FR R + QL+ T RYYS W++WAA IQ AWR Y Sbjct: 484 VPMFEKMDEQLLDALCDRLQPVLYTEES---------------------------YIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVASQFR-RLHSKQLRHTFRYYSQQWKTWAACFIQAAWRRY 636 HSP 3 Score: 61.6178 bits (148), Expect = 4.904e-37 Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 SS G L ++ E+ F++ I + GL+LF+ LIGN+Q +L ++++++RRD E WM R LP LR+R+R +E W G +E + LP LRRDIKR+LCL L+ +V Sbjct: 367 SSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRV 484
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.875e-38 Identity = 67/187 (35.83%), Postives = 100/187 (53.48%), Query Frame = -3 Query: 292 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKR--SQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWR--CYRMKI 840 VPLF S+DD +LD IC R+KP ++++ + ++REGDPV M+FI+ GR++ + G G S+L+ G F G+ELL+W L LP+S+ T + EAF L + +L+++ FR R + Q++ T R+YS WR+WAA IQ AWR C R K+ Sbjct: 496 VPLFKSMDDKLLDAICMRLKPCLFTE---------------------------STYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFVASQFR-RLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKKM 654 HSP 2 Score: 67.3958 bits (163), Expect = 1.875e-38 Identity = 50/118 (42.37%), Postives = 77/118 (65.25%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+ G L ++ P+E+ FSI + + GL+LF LLIGN+Q +L + ++++++RRD E WM R LP LR+RVR ++ W G +E ++ LP LRRDIKR+LCL L+++V Sbjct: 379 STLGQGLETSTYPMEIIFSISLAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRV 496 HSP 3 Score: 140.584 bits (353), Expect = 7.915e-33 Identity = 98/310 (31.61%), Postives = 154/310 (49.68%), Query Frame = -3 Query: 1780 KILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTI---LLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFCF----DPDGIFRYGIYEPALP--VISSNSLAVKILYPIFWGLLNL 2682 KI DP+ + N++ + + +++ VDP FFY L VI+ C+ +D +LA + +RT +D +L H+ LQL+ AY++ S V G G+LV D IA Y++ + F D +LP+PQ V W + L+ ++ LL I L Q++P+ + L +++ G + W G L+ Y++ASH+ G WY+LA +R C Q+ C + C S C NQ NM + + KS C D + F +GIY AL ++SS + VK Y ++WGL NL Sbjct: 87 KIFDPQDKFLLYCNKLFVASCILSVFVDPFFFY---LPVINAESKCLGIDRKLAITASTLRTFIDVFYLAHMALQLRTAYIAPSSRVFGRGELVIDPAQIAKRYLQ--RWFIIDFLSVLPLPQIVVW----RFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLALERNDACWQEACIDAGNC----STDFLYCGNQ-----NMDGYAVWNRAKESVLKSKCRADLDDNNPPFDFGIYTQALSSGIVSSQNFIVKYCYCLWWGLQNL 378
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.055e-37 Identity = 68/188 (36.17%), Postives = 96/188 (51.06%), Query Frame = -3 Query: 283 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRS--QGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIKSD 840 VP F +DD +LD IC+R LV S L ++REGD + M+FI+ GR++ S G G + IL PG F G+ELLSW L LP+S+ T + EAF L A DL+++ FR R + +L+ T R+YS +WR+WAA IQ AWR Y+ ++ + Sbjct: 479 VPFFSQMDDQLLDAICER---LVSS------------------------LCTEGTYLVREGDLISEMLFIIRGRLESSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQFR-RLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMEN 638 HSP 2 Score: 68.9366 bits (167), Expect = 1.055e-37 Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 SS+G LS T E F++ I + GL+LF LIGN+Q +L + ++ +L++RD E WMR RQLP LR RVR +E W G +E ++ LP LRRDI+R+LCLDL+++V Sbjct: 362 SSYGQNLSTTMFMGETTFAVLIAIFGLVLFAHLIGNMQTYLQSLTVRLEEWRLKKRDTEEWMRHRQLPEELRNRVRRYEQYKWLATRGVDEEVLLQSLPTDLRRDIQRHLCLDLVRRV 479 HSP 3 Score: 149.443 bits (376), Expect = 1.174e-35 Identity = 102/355 (28.73%), Postives = 174/355 (49.01%), Query Frame = -3 Query: 1780 SVHQPQWEAYAGSSLFPMEATSDPIKNLTRARYTRGP---------FGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKES--LVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSA---RCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFCFDPDGIFRYGIYEPAL-PVISSNSLAVKILYPIFWGLLNL 2799 +V+ P ++Y S P D + R RYT + ILDP S +V +WN V +V+ +AL +DP++F+ + + D PC D L+ +VT RT D +L H++++ + +++ S V G G+LV D +AIA Y++S F D+ LP+PQ V W ++ + ++ + +I L Q++P+ Y I L ++ K TG + + W G NL+ Y++ASHV G WY+L+ R +C + +C A C + + N ++ AN+ K+ + C +G F+YGI+ A+ + S+ + Y ++WGL L Sbjct: 24 AVNDPMSKSYKLS--LPSALRPDNLLPGNRLRYTDASKSKSSKVSWYKTILDPGSEIVLKWNWVFIVSCMVALFIDPLYFF-VPAIGGDKNYPCARTDTSLSILVTFFRTIADLFYLLHIFIKFRTGFIAPNSSTRVFGRGELVMDPKAIAWRYIKS--DFIIDLIATLPLPQIVIWFVISTT-KSYRFDHNNNAIALIVLLQYIPRFYLIIPLSSQIVKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSVDRYTSCWKSRCNGEAGQVNCQLYYLDCDSMYDNNQMTWANVTKVFK-----------LCDARNGEFKYGIFGNAITKNVVSSQFFERYFYCLWWGLQQL 361
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 1.749e-37 Identity = 97/313 (30.99%), Postives = 161/313 (51.44%), Query Frame = -3 Query: 1780 KILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTL----MTKSFCF-DPDGI-----FRYGIYEPALP--VISSNSLAVKILYPIFWGLLNL 2682 I++P+ +Q WN++ L A IALA+DP+FFY + ++D C+ L L +V+RT +D ++ H+ Q + AY+S S V G G+LV D +AIA Y+ S F D+ ILP+PQ V ++P + + + L+ + +Q++P++ L + + +G + + W G NL Y++ASHV G WY+++ +R C ++ CE+ VC+ ++L C GNS++ +T S F +PD I F +GI+ AL ++ S+ K Y +WGL NL Sbjct: 67 NIINPQGSFLQNWNKIFLFASVIALAIDPLFFY---IPIVDGERHCLNLHRNLEIAASVLRTFIDAFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSSY--FIIDLLSILPLPQLVVLAVIPNVNKPVSL-ITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPE----------VCNFRFLY---------CDGNSSVRNDFLTTSCPFINPDDITNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNL 354 HSP 2 Score: 107.071 bits (266), Expect = 1.500e-35 Identity = 63/189 (33.33%), Postives = 95/189 (50.26%), Query Frame = -3 Query: 286 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRV--KRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWR--CYRMKIKS 840 VPLF+ +D+ +LD +CD++KP++Y+++ IREGDPV M+F++ G++ + G G L+P F G++LL+W L P S+ T + EAF L A+DL+ + FR R + QL+ T R+YS WR+W A IQ AWR C R +S Sbjct: 472 VPLFEIMDEQLLDAVCDKLKPVLYTENSYA---------------------------IREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVYLKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQFR-RLHSKQLQHTFRFYSVQWRTWGASFIQAAWRRHCRRKLARS 632 HSP 3 Score: 66.6254 bits (161), Expect = 1.500e-35 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+ G L+ + E+ F++ I + GL+LF LLIGN+Q +L +++++R+RD E WM R LP LR+R+R +E W G EE + LP LRRDIKR+ CLDL+KKV Sbjct: 355 SALGQNLNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPDDLRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKV 472
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.270e-37 Identity = 104/323 (32.20%), Postives = 157/323 (48.61%), Query Frame = -3 Query: 1780 SDPIKNLTRARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFC---FDPDGIFRYGIYEPALPV-ISSNSLAVKILYPIFWGLLNL 2736 +DP R+ +++ K LDP L+ RWN + L+ +AL +DP++FY L ++ G C+ +D VT R D L H+ L+ K A+VSK S V G G+LV D R IA Y++S F D+ LP+PQ + W ++P L +I L Q++P+ + L RR+ K TG + W G NLI YL+ SHV G WYVL+ +R C +++C + S SCS +L ++ R S C D D F++G++ A ++S+ K Y ++WGL NL Sbjct: 26 NDPNNQRRRSIFSKLR-DKTLDPGGDLITRWNHIFLITCLLALFLDPLYFY---LPIVQAGTACMSIDVRFGIFVTCFRNLADLSFLIHILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYLKS--EFVIDLAATLPLPQIMIWFVIPNAGEFRYAAHQNHTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAYNLILYLLVSHVLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSL-----LFLDCGSLHDPGRQAWMRITRVLSNCDARNDDDQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNL 337 HSP 2 Score: 112.849 bits (281), Expect = 1.162e-34 Identity = 69/186 (37.10%), Postives = 92/186 (49.46%), Query Frame = -3 Query: 289 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRS--QGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIK 840 VP F +DD +LD IC+R+ P + +KD V IREGDPV M+FI+ G+++ S G G + L PG F G+ELL+W L LP S+ T + EAF L A DL+++ FR R + +L+ RYYS WR+W IQ AWR Y MK K Sbjct: 455 VPFFAQMDDQLLDAICERLVPSLNTKDTYV---------------------------IREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFR-RLHSKKLQHAFRYYSHQWRAWGTCFIQAAWRRY-MKRK 611 HSP 3 Score: 57.7658 bits (138), Expect = 1.162e-34 Identity = 51/118 (43.22%), Postives = 72/118 (61.02%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 SS+G L+ ++ E FS I + GL+ F+ LIGN+Q +L A + ++RRRD E WMR RQLP L++RVR F W T G +E + LP LRR I+R+LCL L+++V Sbjct: 338 SSYGQSLAASTLSSETIFSCFICVAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPDELQERVRRFVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRV 455
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.042e-32 Identity = 91/310 (29.35%), Postives = 148/310 (47.74%), Query Frame = -3 Query: 1780 KILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFC--FDPDGI-----FRYGIYEPALP--VISSNSLAVKILYPIFWGLLNL 2682 ++++P +Q WN++ L+ +ALA DP+FFY + + C+ LD +L I V RT +D ++ H+ Q +++ S G G+L + IA Y+ S F D+ ILP+PQ V IVP++ R + VIF Q++P++ L + + + +G + + W G LNL Y++ASHV G WY+++ +R C ++ C + C++ YL S G ++ L C DP+ I F +GI+ AL V+ S K Y +WGL NL Sbjct: 71 RVMNPNDSYLQSWNKIFLLLSVVALAFDPLFFY---IPYVKPERFCLNLDKKLQTIACVFRTFIDAFYVVHMLFQFHTGFITPSSSGFGRGELNEKHKDIALRYLGSY--FLIDLLSILPIPQVVVLAIVPRMRRPASLVAKELLKWVIF-CQYVPRIARIYPLFKEVTRTSGLVTETAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQN-----------CTHAYLYC------SPTGEDNRLFLNGSCPLIDPEEITNSTVFNFGIFADALQSGVVESRDFPKKFFYCFWWGLRNL 357 HSP 2 Score: 89.7373 bits (221), Expect = 5.005e-30 Identity = 58/179 (32.40%), Postives = 89/179 (49.72%), Query Frame = -3 Query: 310 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRV--KRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWR 840 VP F ++DD +LD +C R+K ++Y++ I+REG+PV M+FI+ G + + G G + L G F GD LL+W L P + P SS T + E F L+A+DL+++ +R R + QL+ R+YS W++WAA IQ AW+ Sbjct: 475 VPWFQAMDDRLLDALCARLKTVLYTEKS---------------------------YIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCGD-LLTWAL-DPLSSQFPISSRTVQALTEVEGFLLSADDLKFVATQYR-RLHSKQLRHMFRFYSVQWQTWAACFIQAAWK 623 HSP 3 Score: 65.4698 bits (158), Expect = 5.005e-30 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+ G L ++ E+ F+I I + GL+LF LLIGN+Q +L ++++++RRD E WM R LP LR+R+R +E W G EE + LP LR+DIKR+LCL L+KKV Sbjct: 358 SALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKV 475
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNG12_ARATH (Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis thaliana GN=CNGC12 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.357e-24 Identity = 59/197 (29.95%), Postives = 89/197 (45.18%), Query Frame = -3 Query: 271 VPLFDSLDD-IILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSI--LEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWR--CYRM--KIKSDPSIP 840 VP + +DD +L+ +CDRVK + Y + I+REG PV M+ + G++K + G + + + L+ G G+ L + RLP S+ T + E F L +D+++I H F +L+RT R YS WRSWAA IQ AWR C R K + + +IP Sbjct: 433 VPWLNIMDDGWLLEAVCDRVKSVFY---------------------------LANSFIVREGHPVEEMLIVTRGKLKSTTGSHEMGVRNNCCDLQDGDICGELLFNGS-------RLPTSTRTVMTLTEVEGFILLPDDIKFIASHLNV-FQRQKLQRTFRLYSQQWRSWAAFFIQAAWRKHCKRKLSKTRDNENIP 594 HSP 2 Score: 55.4546 bits (132), Expect = 6.357e-24 Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+ G L +++ E+ F+I I + GLLLF +LIGN+Q +L +++ +RRD E WM R +P L++R+R FE W G EE + LP LR + KRYL LD++K+V Sbjct: 316 SALGQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNVQKYLQSSTTRVDEMEEKRRDTEKWMSYRVIPEYLKERIRRFEDYKWRETKGTEEEALLRSLPKDLRLETKRYLYLDMLKRV 433 HSP 3 Score: 109.383 bits (272), Expect = 4.228e-23 Identity = 87/325 (26.77%), Postives = 149/325 (45.85%), Query Frame = -3 Query: 1780 RARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVP---KLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFC--FDPDGI-----FRYGIYEPALPV----ISSNSLAVKILYPIFWGLLNL 2712 + + RG K+ L + W + +L+A +ALA+DP+F + + +ID C D L A+V V+RT +D ++ H+ L ++ S G++V ++A R L F D+ +LP+PQ V ++P L+ E IL I LSQ++P++ L + + + G + S W G LNL Y++ S+V G WY+ + +R C + C R++ C+ L++ ++L R G ++ + C DP I F +G+Y AL + K +Y +WGL N+ Sbjct: 19 KLKSVRGRLKKVYGKMKTL-ENWRKTVLLACVVALAIDPLFLF---IPLIDSQRFCFTFDKTLVAVVCVIRTFIDTFYVIHIIYYLITETIAPRSQASLRGEIVVHSKATLK--TRLLFHFIVDIISVLPIPQVVVLTLIPLSASLVSER-------ILKWIILSQYVPRIIRMYPLYKEVTRAFGTVAESKWAGAALNLFLYMLHSYVFGAFWYLSSIERKSKCWRAACARTSDCN--------------LTVTDLL-CKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFGMYIDALKSGVLEVKPKDFPRKFVYCFWWGLRNI 315
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Match: CNG11_ARATH (Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana GN=CNGC11 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 2.376e-22 Identity = 91/341 (26.69%), Postives = 154/341 (45.16%), Query Frame = -3 Query: 1780 NLTRARYTR----GPFGKILDPRSGL---------VQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVP---KLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFC--FDPDGI-----FRYGIYEPALPV----ISSNSLAVKILYPIFWGLLNL 2721 NL R ++ R G GK+ R L ++ W + +L+A +ALA+DP+F + + +ID C D L A+V V+RT +D ++ H+ L ++ S G++V ++A R L F D+ +LP+PQ V ++P L+ E IL I LSQ++P++ L + + + G + S G LN Y++ S+V G WY+ + +R TC + C R++ C+ L++ ++L R G ++ + C DP I F +G+Y AL + K +Y +WGL N+ Sbjct: 2 NLQRRKFVRLDSTGVDGKLKSVRGRLKKVYGKMKTLENWRKTVLLACVVALAIDPLFLF---IPLIDSQRFCFTFDKTLVAVVCVIRTFIDTFYVIHIIYYLITETIAPRSQASLRGEIVVHSKATLK--TRLLFHFIVDIISVLPIPQVVVLTLIPLSASLVSER-------ILKWIILSQYVPRIIRMYPLYKEVTRAFGTVAESKRVGAALNFFLYMLHSYVCGAFWYLSSIERKSTCWRAACARTSDCN--------------LTVTDLL-CKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFGMYIDALKSGVLEVKPKDFPRKFVYCFWWGLRNI 315 HSP 2 Score: 75.0998 bits (183), Expect = 2.741e-17 Identity = 52/174 (29.89%), Postives = 83/174 (47.70%), Query Frame = -3 Query: 310 SLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRV--KRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWR 825 ++DD +LD +C R+K + Y++ I+REG+PV M+FI+ G + + G G + L G GD LL+W L + P SS T + E F ++A+DL+++ +R R + QL+ R+YS W++WAA IQ AW+ Sbjct: 438 AMDDQLLDALCARLKTVHYTEKS---------------------------YIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLIAGDSCGD-LLTWAL-YSLSSQFPISSRTVQALTEVEGFVISADDLKFVATQYR-RLHSKQLQHMFRFYSLQWQTWAACFIQAAWK 581 HSP 3 Score: 37.3502 bits (85), Expect = 2.741e-17 Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = -2 Query: 932 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCL 1267 S+ G L +++ E+ F+I I + GLLLF +LIGN+Q +L +++ ++RD E WM R++P L++R+R FE W G EE + LP LR + KRYL L Sbjct: 316 SALGQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNVQKYLQSSTTRVDEMEEKKRDTEKWMSYREIPEYLKERIRRFEDYKWRRTKGTEEEALLRSLPKDLRLETKRYLFL 427
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: A0A061EMN1_THECC (Cyclic nucleotide-regulated ion channel family protein isoform 1 OS=Theobroma cacao GN=TCM_018690 PE=4 SV=1) HSP 1 Score: 521.931 bits (1343), Expect = 1.264e-167 Identity = 263/377 (69.76%), Postives = 309/377 (81.96%), Query Frame = -3 Query: 1780 DSRSSSERDGPVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPMEATSDPIKNLTRA-RYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNST-LMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2904 D D P+S+++ECYACTQVGVPVFHSTSCD HQP+WEA AGSSL P++A + K A R+ GP G++LDPRS VQ+WNR L+ARG+ALA+DP+FFY L+ + G PC+Y+DG LAAIVT++RTCVD VHL+HLWLQ ++AYVS+ESLV+GCGKLVWDARAIASHYVRSLKGFWFD FVILPVPQAVFWL+VPKL+REEQ KLIMTILL+IFL QFLPKVYHSICLMRRM+KVTGYIFG+IWWGFGLNLIAY IASHVAGGCWYVLA +RV +CL+QQCERS RC +S SCS+ VC Q+L A + + CGGNST ++ K C D G F YGIY+ ALPV+SSNS+AVKILYPIFWGL+ L Sbjct: 27 DHSGDISEDNPISNTVECYACTQVGVPVFHSTSCDHAHQPEWEASAGSSLVPIQARAGQKKTQAAASRHPSGPLGRVLDPRSKRVQKWNRAFLLARGMALAIDPLFFYALS--IGRGGFPCLYMDGGLAAIVTILRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQAVFWLVVPKLIREEQIKLIMTILLLIFLFQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERSERCKLSLSCSEEVCY-QFLFPAEAVG-NPCGGNSTKVVGKPLCLDVHGPFNYGIYQWALPVVSSNSVAVKILYPIFWGLMTL 399 HSP 2 Score: 299.286 bits (765), Expect = 4.837e-114 Identity = 149/219 (68.04%), Postives = 167/219 (76.26%), Query Frame = -3 Query: 187 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIKSDPSIPVILNGGSED-RLRKYAAMFMSLKPHDHLE 840 VPLF +LDD+ILDNICDRVKPLV+SKDEK IIREGDPV RMVFIV GR+KRSQ LSKG +ATSI+EPGGFLGDELLSWCLRRPFIDRLPASS TF C+E EAFGL+AN+LRYIT+HFRY+FAN +LKRT RYYSSNWR+WAAVNIQ AWR YR + + P I V NG S D RL +YAAMFMS++PHDHLE Sbjct: 517 VPLFHNLDDLILDNICDRVKPLVFSKDEK---------------------------IIREGDPVQRMVFIVRGRIKRSQSLSKGMVATSIIEPGGFLGDELLSWCLRRPFIDRLPASSATFVCVESIEAFGLDANNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWRRYRTRTRG-PMISVTENGNSSDRRLLQYAAMFMSIRPHDHLE 707 HSP 3 Score: 142.895 bits (359), Expect = 4.837e-114 Identity = 92/118 (77.97%), Postives = 105/118 (88.98%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+FGN+L PTS+ LEV FSICIVL GLLLFTLLIGNIQVFLH VMA ++K+QLR RD+EWWM+RRQLPS LRQRVRHFE Q W T+GGE+EM I++LP+GLRRDIKRYLCLDLIKKV Sbjct: 400 STFGNDLEPTSHWLEVMFSICIVLAGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQRVRHFERQKWATLGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKV 517
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: A0A067K612_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19903 PE=4 SV=1) HSP 1 Score: 516.924 bits (1330), Expect = 5.996e-165 Identity = 247/379 (65.17%), Postives = 303/379 (79.95%), Query Frame = -3 Query: 1780 KDSRSSSERDGPVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPMEATSDPIK---NLTRARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2907 +++ S + + ++++ECYACTQVGVPVFHSTSCD HQP+W A AGS L P+++ + P K T +R GPFG +LDPRS VQ+WNR L+ARG+ALA+DP+FFY+L+ + G PC+Y+DG LAAIVTV+RTCVD +HL HLWLQ ++AYVS+ESLVIGCGKLVWDAR+IASHYVRSLKGFWFD FVILPVPQAVFWL++PKL+REEQ KLIMTILL+IF+ QFLPKVYH I LMR+M+KVTGYIFG+IWWGFGLNLIAY IASHVAGGCWYVLA +R +CL+QQC+R +CD+S SCS+ +C Q+L + + G ++T + K C D G F YGIY+ ALPVISSNSLAVKILYPIFWGL+ L Sbjct: 88 ENNNSIVDDNSVPNNTVECYACTQVGVPVFHSTSCDHAHQPEWVASAGSYLVPIQSRTGPKKCPSTQTHSRLPTGPFGTVLDPRSKRVQKWNRAFLLARGMALAIDPLFFYSLS--IGRGGAPCLYMDGWLAAIVTVLRTCVDAIHLCHLWLQFRLAYVSRESLVIGCGKLVWDARSIASHYVRSLKGFWFDAFVILPVPQAVFWLVLPKLIREEQIKLIMTILLIIFMFQFLPKVYHCIYLMRKMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRAASCLRQQCDRRPKCDLSLSCSEEICY-QFLVNTDTIGNPCVGNSTTTVRKPMCLDMSGPFNYGIYKTALPVISSNSLAVKILYPIFWGLMTL 463 HSP 2 Score: 299.671 bits (766), Expect = 3.554e-114 Identity = 147/218 (67.43%), Postives = 167/218 (76.61%), Query Frame = -3 Query: 187 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIKSDPSIPVILNGGSEDRLRKYAAMFMSLKPHDHLE 840 VPLF +LDD+ILDNICDRV+PLV+SKDEK IIREGDPV RMVFIV GR+KRSQ LSKG +ATS+LEPGGFLGDELLSWCLRRPF+DRLPASS TF CIE TEAFGL+AN LRYIT+HFRY+FAN +LKRT RYYSSNWR+WAAVN+QFAWR YR + + P I NG S+ RL +YAAMFMS++PHDHLE Sbjct: 581 VPLFHNLDDLILDNICDRVRPLVFSKDEK---------------------------IIREGDPVQRMVFIVRGRIKRSQSLSKGMLATSVLEPGGFLGDELLSWCLRRPFMDRLPASSATFVCIESTEAFGLDANHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNLQFAWRRYRTRTRG-PVITPTDNGSSDRRLLQYAAMFMSIRPHDHLE 770 HSP 3 Score: 142.895 bits (359), Expect = 3.554e-114 Identity = 91/118 (77.12%), Postives = 104/118 (88.14%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+FGN+L PTSN LEV FSICIVL GL+LFTLLIGNIQVFLH VMA ++K+QLR RD+EWWMRRRQLPS LRQRVRHFE Q W MGGE+E+ +++LP+GLRRDIKRYLCLDLIKKV Sbjct: 464 STFGNDLDPTSNWLEVVFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDELELVKDLPEGLRRDIKRYLCLDLIKKV 581
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: V4T4L0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011184mg PE=4 SV=1) HSP 1 Score: 512.301 bits (1318), Expect = 7.863e-164 Identity = 254/367 (69.21%), Postives = 297/367 (80.93%), Query Frame = -3 Query: 1780 PVSS-SIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPMEATSDPIKNLTRARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNS-TLMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2874 P+S+ + ECYACTQVGVPVFHSTSCD HQP+WEA AGSSL P++A S I R F + DPRS VQR NR L+ARG++LAVDP+FFY L+ + G PC+Y+DG LAAIVTV+RTCVD VHL+HLWLQ ++AYVS+ESLV+GCGKLVWD RAIASHYVRSLKGFWFDVFVILPVPQAVFWL+VPKL+REE+ K+IMTILL+IFL QFLPKVYHSI LMRRM+KVTGYIFG+IWWGFGLNLIAY IASHVAGGCWYVLA +RV +CL+QQC R A C++ SCS+ VC Q+L + + + CGGNS T + KS C D +G F YGIY+ ALPVISSNS+AVKILYPIFWGL+ L Sbjct: 43 PISNHNFECYACTQVGVPVFHSTSCDQAHQPEWEASAGSSLVPIQARSK-ILGPKDGRPASATFAHVFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALS--IGRGGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYVRSLKGFWFDVFVILPVPQAVFWLVVPKLIREEKIKMIMTILLIIFLFQFLPKVYHSIYLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCHRQANCNLYLSCSEEVCY-QFLVPSGAIGNT-CGGNSTTTVRKSLCLDVNGPFHYGIYQWALPVISSNSVAVKILYPIFWGLMTL 404 HSP 2 Score: 296.975 bits (759), Expect = 1.511e-112 Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = -3 Query: 187 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIKSDPSIPVILNG-GSE-DRLRKYAAMFMSLKPHDHLE 840 VPLF +LDD+ILDNICDRV+PLVYSKDEK IIREGDPV RMVFIV GR+KR Q LSKG +ATS+LEPGGFLGDELLSWCLRRPFIDRLPASS TF C+E EAFGL+A +LRYIT+HFRY+FAN +LKRT RYYSSNWR+WAAVNIQFAWR YRM+ + P I V NG G+E +RL +YAAMFMS++PHDHLE Sbjct: 522 VPLFHNLDDLILDNICDRVRPLVYSKDEK---------------------------IIREGDPVPRMVFIVRGRIKRCQSLSKGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRG-PVISVTENGEGNESNRLMRYAAMFMSIRPHDHLE 713 HSP 3 Score: 140.198 bits (352), Expect = 1.511e-112 Identity = 91/118 (77.12%), Postives = 104/118 (88.14%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+FGN+L PTS+ LEV FSICIVL GL+LFTLLIGNIQVFLH VMA ++K+QLR RD+EWWMRRRQLPS LRQRVRH+E Q W TMGGE+EM I++LP+GLRR IKRYLCLDLIKKV Sbjct: 405 STFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKV 522
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: M5WYB4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002126mg PE=4 SV=1) HSP 1 Score: 511.916 bits (1317), Expect = 8.756e-164 Identity = 259/370 (70.00%), Postives = 305/370 (82.43%), Query Frame = -3 Query: 1780 DGPVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPMEATSDPIKNLTRARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNST---LMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2880 + P+S+S+ECYACTQVGVPVFHSTSCD HQ QWEA AGSSL P+++ SD K L+R GPFG +LDPRS VQRWNR L+ARG+ALAVDP+FFY L+ + G PC+Y+DG LAAIVTV+RTCVD VHL HLWLQ ++AYVS+ESLV+GCGKLVWD AIASHYVRSLKGFWFD FVILPVPQAVFWL++PKL+REE+ K+IMTILL+IFL QFLPKVYHSICLMRRM+KVTGYIFG+IWWGFGLNLIAY IASHVAGGCWYVLA +RV +CL+Q CE S C++S SCS+ VC Q+LS A+ ++ + CGGN+T + C D +G F YGIY+ ALPVISSNSLA+KILYPIFWGL+ L Sbjct: 40 NAPISNSVECYACTQVGVPVFHSTSCDGAHQLQWEASAGSSLVPIQSRSDLKKGLSRG-LPAGPFGHVLDPRSKRVQRWNRAFLLARGMALAVDPLFFYALS--IGRGGTPCLYMDGGLAAIVTVLRTCVDAVHLCHLWLQFRLAYVSRESLVVGCGKLVWDPHAIASHYVRSLKGFWFDAFVILPVPQAVFWLVLPKLIREEKIKVIMTILLLIFLFQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQHCELSVNCNLSLSCSEEVCY-QFLSPADTMQ-NPCGGNTTASVVRKPPLCLDVNGTFNYGIYQWALPVISSNSLAIKILYPIFWGLMTL 404 HSP 2 Score: 315.464 bits (807), Expect = 2.907e-117 Identity = 150/218 (68.81%), Postives = 171/218 (78.44%), Query Frame = -3 Query: 187 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIKSDPSIPVILNGGSEDRLRKYAAMFMSLKPHDHLE 840 VPLF +LDD+ILDNICDRV+PLV+SKDEK IIREGDPV +M+FIV G +KRSQGLSKG + T++LEPGGFLGDELLSWCLRRPFIDRLPASS TF C+E TEAFGLNA+DLRYIT+HFRY+FAN +LKRT RYYSSNWR+WAAVNIQFAWR YR++ P IPV+ NGG+E RL +YAAMFMSLKPHDHLE Sbjct: 522 VPLFHNLDDLILDNICDRVRPLVFSKDEK---------------------------IIREGDPVPKMLFIVRGHIKRSQGLSKGMVGTNVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESTEAFGLNADDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRLRTNRGPVIPVVQNGGTEQRLLQYAAMFMSLKPHDHLE 712 HSP 3 Score: 137.502 bits (345), Expect = 2.907e-117 Identity = 90/118 (76.27%), Postives = 105/118 (88.98%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+FGN+L PTS+ LEV FSICIVL GLLLFTLLIGNIQVFLH VMA ++K+QLR RD+EWWMRRRQLPSGLR+RVRH+E W TMGGE+EM I++LP+GLRR+IKR+LCLDLIKKV Sbjct: 405 STFGNDLEPTSHWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSGLRRRVRHYERHRWVTMGGEDEMDLIKDLPEGLRREIKRHLCLDLIKKV 522
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: A0A0D2NKA3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G012600 PE=4 SV=1) HSP 1 Score: 504.212 bits (1297), Expect = 5.909e-163 Identity = 254/378 (67.20%), Postives = 305/378 (80.69%), Query Frame = -3 Query: 1780 SSERDGPVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPMEATSDPIKNLTR------ARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNST-LMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2892 + P+S ++ECYACTQVGVPVFHSTSCD H P+WEA AGSSL P++A + + T+ R GPFG++LDPR+ VQ WNR L+AR +ALA+DP+FFY L+ + G PC+Y+DG LAAIVTV+RTCVD VHL+HLWLQ ++AYVS+ESLV+GCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWL+VPKL+REEQ K+IMTILL+IFL QFLPKVYH ICLMRRM+KVTGYIFG+IWWGFGLNLIAY IASHVAGGCWYVLA +RV +CL+QQC R+ +C +S SCS+ VC Q+L A + + CGGNST ++ K C + G F YGIY+ ALPV+SSNS+AVKILYPIFWGL++L Sbjct: 34 EGNEENPISYTVECYACTQVGVPVFHSTSCDQAHPPEWEASAGSSLVPIQARTASKQKKTQQPAAPNTRRPSGPFGRVLDPRTKRVQNWNRAFLLARAMALAIDPLFFYALS--IGRGGSPCLYMDGGLAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLVVPKLIREEQIKIIMTILLLIFLFQFLPKVYHIICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCARNEQCKLSLSCSEEVCY-QFLFPAEAVG-NTCGGNSTNVIGKPLCLEVHGPFNYGIYQWALPVVSSNSVAVKILYPIFWGLMSL 407 HSP 2 Score: 140.198 bits (352), Expect = 6.101e-41 Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+FGN+L PTS+ LEV FSICIVL GL+LFTLLIGNIQVFLH VMA ++K+QLR RD+EWWM+RRQLPS LRQRVRH+E Q W T+GGE+EM I++LP+GLRRDIKR+LCLDLIKKV Sbjct: 408 STFGNDLEPTSHWLEVMFSICIVLAGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQRVRHYERQKWATLGGEDEMELIKDLPEGLRRDIKRFLCLDLIKKV 525 HSP 3 Score: 57.7658 bits (138), Expect = 6.101e-41 Identity = 25/30 (83.33%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 751 VPLFDSLDDIILDNICDRVKPLVYSKDEKV 840 VPLF +L+D+ILDNICDRVKPLV+SKDEKV Sbjct: 525 VPLFHNLNDLILDNICDRVKPLVFSKDEKV 554
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: E4MW85_EUTHA (mRNA, clone: RTFL01-07-M14 OS=Eutrema halophilum PE=2 SV=1) HSP 1 Score: 507.294 bits (1305), Expect = 6.941e-162 Identity = 253/377 (67.11%), Postives = 298/377 (79.05%), Query Frame = -3 Query: 1780 KKDSRSSSERDGPVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPMEATSDPIKNLTRARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2910 SSS D PV SS+ECYACTQVGVP FHSTSCD H P+W A AGSSL P++ S P TR R +GPFG++LDPRS VQRWNR LL+ARG+ALAVDP+FFY L++ GP C+Y+DG AA+VT VRTC+D VHLWH+WLQ ++AYVS+ESLV+GCGKLVWD RAIASHY RSL GFWFDV VILPVPQAVFWL+VPKL+REE+ KLIMTILL+IFL QFLPK+YH ICLMRRM+KVTGYIFG+IWWGF LNLIAY IASHVAGGCWYVLA +RV +C++QQC R+ C++S SC + VC Q++S +S G ++++ K C D +G FRYGIY ALPVISSNSLAVKILYPIFWGL+ L Sbjct: 34 NNSGESSSGDDTPVLSSVECYACTQVGVPAFHSTSCDQAHAPEWRASAGSSLVPIQEGSAPNPTRTRFRRLKGPFGEVLDPRSKRVQRWNRALLIARGMALAVDPLFFYALSIGRTT-GPACLYMDGAFAAVVTAVRTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYARSLTGFWFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRAGNCNLSLSCKEEVCY-QFVSPIGYPCLS--GNLTSVVNKPMCLDSNGPFRYGIYGWALPVISSNSLAVKILYPIFWGLMTL 406 HSP 2 Score: 268.47 bits (685), Expect = 1.188e-100 Identity = 136/226 (60.18%), Postives = 157/226 (69.47%), Query Frame = -3 Query: 187 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIKSDPS-----IPVILN---GGSEDRLRKYAAMFMSLKPHDHLE 840 VPLF +DD+ILDNICDR K V+SKDEK IIREGDPV RM+FI+ GRVKR+Q LSKG +ATS LE GG+LGDELLSWCLRRPFIDRLP SS TF C++ EAF L + DLRYIT+HFRY+FAN +LKRT RYYSSNWR+WAAVNIQ AWR YR + + + PV N G SE RL +YAAMFMS++PHDHLE Sbjct: 524 VPLFRGMDDLILDNICDRAKHRVFSKDEK---------------------------IIREGDPVQRMIFIMRGRVKRNQSLSKGVVATSTLEQGGYLGDELLSWCLRRPFIDRLPPSSATFVCLDNIEAFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRYRKRTRGGENNGGSMSPVSENSVEGNSERRLLQYAAMFMSIRPHDHLE 722 HSP 3 Score: 129.028 bits (323), Expect = 1.188e-100 Identity = 85/118 (72.03%), Postives = 99/118 (83.90%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+FGN+L PTSN LEV FSI +VL GLLLFTLLIGNIQVFLH VMA ++K+Q+R RD+EWWM+RRQLPS LRQRVR FE Q W +GGE+E+ I++LP GLRRDIKRYLC DLI KV Sbjct: 407 STFGNDLEPTSNWLEVMFSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWTALGGEDELELIQDLPPGLRRDIKRYLCFDLINKV 524
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: V4KUA8_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10012798mg PE=4 SV=1) HSP 1 Score: 507.294 bits (1305), Expect = 6.941e-162 Identity = 253/377 (67.11%), Postives = 298/377 (79.05%), Query Frame = -3 Query: 1780 KKDSRSSSERDGPVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPMEATSDPIKNLTRARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2910 SSS D PV SS+ECYACTQVGVP FHSTSCD H P+W A AGSSL P++ S P TR R +GPFG++LDPRS VQRWNR LL+ARG+ALAVDP+FFY L++ GP C+Y+DG AA+VT VRTC+D VHLWH+WLQ ++AYVS+ESLV+GCGKLVWD RAIASHY RSL GFWFDV VILPVPQAVFWL+VPKL+REE+ KLIMTILL+IFL QFLPK+YH ICLMRRM+KVTGYIFG+IWWGF LNLIAY IASHVAGGCWYVLA +RV +C++QQC R+ C++S SC + VC Q++S +S G ++++ K C D +G FRYGIY ALPVISSNSLAVKILYPIFWGL+ L Sbjct: 34 NNSGESSSGDDTPVLSSVECYACTQVGVPAFHSTSCDQAHAPEWRASAGSSLVPIQEGSAPNPTRTRFRRLKGPFGEVLDPRSKRVQRWNRALLIARGMALAVDPLFFYALSIGRTT-GPACLYMDGAFAAVVTAVRTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYARSLTGFWFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRAGNCNLSLSCKEEVCY-QFVSPIGYPCLS--GNLTSVVNKPMCLDSNGPFRYGIYGWALPVISSNSLAVKILYPIFWGLMTL 406 HSP 2 Score: 268.47 bits (685), Expect = 1.188e-100 Identity = 136/226 (60.18%), Postives = 157/226 (69.47%), Query Frame = -3 Query: 187 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIKSDPS-----IPVILN---GGSEDRLRKYAAMFMSLKPHDHLE 840 VPLF +DD+ILDNICDR K V+SKDEK IIREGDPV RM+FI+ GRVKR+Q LSKG +ATS LE GG+LGDELLSWCLRRPFIDRLP SS TF C++ EAF L + DLRYIT+HFRY+FAN +LKRT RYYSSNWR+WAAVNIQ AWR YR + + + PV N G SE RL +YAAMFMS++PHDHLE Sbjct: 524 VPLFRGMDDLILDNICDRAKHRVFSKDEK---------------------------IIREGDPVQRMIFIMRGRVKRNQSLSKGVVATSTLEQGGYLGDELLSWCLRRPFIDRLPPSSATFVCLDNIEAFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRYRKRTRGGENNGGSMSPVSENSVEGNSERRLLQYAAMFMSIRPHDHLE 722 HSP 3 Score: 129.028 bits (323), Expect = 1.188e-100 Identity = 85/118 (72.03%), Postives = 99/118 (83.90%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+FGN+L PTSN LEV FSI +VL GLLLFTLLIGNIQVFLH VMA ++K+Q+R RD+EWWM+RRQLPS LRQRVR FE Q W +GGE+E+ I++LP GLRRDIKRYLC DLI KV Sbjct: 407 STFGNDLEPTSNWLEVMFSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWTALGGEDELELIQDLPPGLRRDIKRYLCFDLINKV 524
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: K4BC11_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g088560.2 PE=4 SV=1) HSP 1 Score: 506.523 bits (1303), Expect = 9.541e-162 Identity = 256/369 (69.38%), Postives = 304/369 (82.38%), Query Frame = -3 Query: 1780 PVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPMEATSDPIKN---LTRARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMT-KSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2874 P+S+SIECYACTQVGVPVFHSTSCD +QP+WEA AGSSL P++ +D +R+R+T GPFG++LDPRS VQRWNR++L+ARG+ALAVDP+FFY L+ + G PC+Y+DG LAAIVTV+RT VD VHL+HLWLQ ++AYVS+ESLV+GCGKLVWDARAIASHYVRSLKGFWFD FVILPVPQAVFWL+VPKL+REEQ KLIMTILL++FL QFLPKVYH I LMRRM+KVTGYIFG+IWWGFGLNLIAY IASHVAGGCWYVLA +RV +CL+QQCER+ C++S SCS+ VC L + + C GNST +T K C D +G F YGIY+ ALPV+SS S+ VKILYPIFWGL+ L Sbjct: 37 PISNSIECYACTQVGVPVFHSTSCDGANQPEWEASAGSSLVPIQNRTDSKTGKSRSSRSRHTSGPFGRVLDPRSKRVQRWNRMILLARGMALAVDPLFFYALS--IGRGGSPCLYMDGSLAAIVTVIRTSVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQAVFWLVVPKLIREEQIKLIMTILLLMFLFQFLPKVYHCISLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERNPSCNLSLSCSEEVCYQFLLPTGTV--GNPCAGNSTTVTRKPMCLDVNGPFPYGIYQWALPVVSSRSVTVKILYPIFWGLMTL 401 HSP 2 Score: 306.99 bits (785), Expect = 1.889e-115 Identity = 153/218 (70.18%), Postives = 170/218 (77.98%), Query Frame = -3 Query: 187 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIKSDPSIPVILNGGSEDRLRKYAAMFMSLKPHDHLE 840 VPLF+SLDD+ILDNICDRVKPLV+SKDEK IIREGDPV R+VFIV GRVK SQ LSKG IATSILEPGGF GDELLSWCLRRPFIDRLPASS TFTCIE TEAFGL+AN LR+IT+HFRY+FAN +LKRT RYYSSNWR+WAAVNIQ AWR Y M+ S P+I VI NG ++ RLRKYAAMF+S++PHDHLE Sbjct: 519 VPLFESLDDLILDNICDRVKPLVFSKDEK---------------------------IIREGDPVHRVVFIVRGRVKSSQNLSKGVIATSILEPGGFFGDELLSWCLRRPFIDRLPASSATFTCIESTEAFGLDANHLRFITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWRRYMMRT-SRPTIHVIENGDNDHRLRKYAAMFLSIRPHDHLE 708 HSP 3 Score: 139.813 bits (351), Expect = 1.889e-115 Identity = 91/124 (73.39%), Postives = 106/124 (85.48%), Query Frame = -2 Query: 896 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKVARTSSL 1267 S+FGN+L PTS+ LEV FSIC+VL GL+LFTLLIGNIQVFLH VMA ++K+QLR RD+EWWMRRRQLPS LRQRVRHFE Q W MGGE+EM +++LP+GLRRDIKR+LCLDLIKKV SL Sbjct: 402 STFGNDLEPTSHWLEVIFSICLVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSQLRQRVRHFEHQRWAMMGGEDEMELVKDLPEGLRRDIKRFLCLDLIKKVPLFESL 525
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: U5FJ14_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s12550g PE=4 SV=1) HSP 1 Score: 500.36 bits (1287), Expect = 1.064e-161 Identity = 251/378 (66.40%), Postives = 299/378 (79.10%), Query Frame = -3 Query: 1780 DSRSSSERDGPVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPME---ATSDPIKNLTRARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNSTLMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2904 +S ++ + P+S+SIECYACTQVGVPVFHSTSCD HQP+WEA AGSSL P++ + N ++R GP G +LDPRS VQ+WNR L+ARG+ALAVDP+FFY L+ + +G PC+Y+DG LAAIVTV+RT VD +HL HLWLQ ++AYVS+ESLV+GCG LVWDARAIASHYVRSLKGFWFD FVILPVPQAVFWL+VPKL+REEQ KLIMTILL+IFL QFLPKVYH ICLM+RM+KVTGYIFG+IWWGFGLNLIAY IASHVAGGCWYVLA +RV +CL+Q CE CD+S +CS+ VC Q+L A + G + + K C D +G F YGIY+ ALPVISSNSL+VKILYPIFWGL+ L Sbjct: 37 NSTNNIDDSNPISNSIECYACTQVGVPVFHSTSCDQAHQPEWEASAGSSLVPIKNRLGSRKSPANRAQSRRPAGPLGTVLDPRSKRVQKWNRAFLLARGMALAVDPLFFYALS--IGRNGAPCLYMDGGLAAIVTVLRTSVDAIHLCHLWLQFRLAYVSRESLVVGCGNLVWDARAIASHYVRSLKGFWFDAFVILPVPQAVFWLLVPKLIREEQIKLIMTILLLIFLFQFLPKVYHCICLMKRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLKQSCESRPNCDLSLACSEEVCY-QFLLRAGTIGNPCVGNTTHTVRKPMCLDVNGAFNYGIYKWALPVISSNSLSVKILYPIFWGLMTL 411 HSP 2 Score: 141.354 bits (355), Expect = 8.177e-32 Identity = 91/123 (73.98%), Postives = 107/123 (86.99%), Query Frame = -2 Query: 899 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKVARTSS 1267 S+FGN+L PTS+ LEV FSICIVL GL+LFTLLIGNIQVFLH VMA ++K+QLR RD+EWWMRRRQLPS LRQRVRH+E Q W TMGGE+E+ I++LP+GLRRDIKRYLCLDLIKKV ++ Sbjct: 412 STFGNDLEPTSHWLEVIFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHYERQRWATMGGEDEIELIKDLPEGLRRDIKRYLCLDLIKKVTEMTA 534
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Match: A0A0D2RVM7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G012600 PE=4 SV=1) HSP 1 Score: 505.753 bits (1301), Expect = 1.202e-161 Identity = 254/378 (67.20%), Postives = 305/378 (80.69%), Query Frame = -3 Query: 1780 SSERDGPVSSSIECYACTQVGVPVFHSTSCDSVHQPQWEAYAGSSLFPMEATSDPIKNLTR------ARYTRGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPMFFYTLTLMVIDDGPPCVYLDGELAAIVTVVRTCVDGVHLWHLWLQLKMAYVSKESLVIGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLIVPKLLREEQYKLIMTILLVIFLSQFLPKVYHSICLMRRMRKVTGYIFGSIWWGFGLNLIAYLIASHVAGGCWYVLATKRVVTCLQQQCERSARCDISSSCSKGVCSNQYLSLANMLKMSRCGGNST-LMTKSFCFDPDGIFRYGIYEPALPVISSNSLAVKILYPIFWGLLNL 2892 + P+S ++ECYACTQVGVPVFHSTSCD H P+WEA AGSSL P++A + + T+ R GPFG++LDPR+ VQ WNR L+AR +ALA+DP+FFY L+ + G PC+Y+DG LAAIVTV+RTCVD VHL+HLWLQ ++AYVS+ESLV+GCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWL+VPKL+REEQ K+IMTILL+IFL QFLPKVYH ICLMRRM+KVTGYIFG+IWWGFGLNLIAY IASHVAGGCWYVLA +RV +CL+QQC R+ +C +S SCS+ VC Q+L A + + CGGNST ++ K C + G F YGIY+ ALPV+SSNS+AVKILYPIFWGL++L Sbjct: 13 EGNEENPISYTVECYACTQVGVPVFHSTSCDQAHPPEWEASAGSSLVPIQARTASKQKKTQQPAAPNTRRPSGPFGRVLDPRTKRVQNWNRAFLLARAMALAIDPLFFYALS--IGRGGSPCLYMDGGLAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLVVPKLIREEQIKIIMTILLLIFLFQFLPKVYHIICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCARNEQCKLSLSCSEEVCY-QFLFPAEAVGNT-CGGNSTNVIGKPLCLEVHGPFNYGIYQWALPVVSSNSVAVKILYPIFWGLMSL 386 HSP 2 Score: 281.182 bits (718), Expect = 6.066e-108 Identity = 139/219 (63.47%), Postives = 161/219 (73.52%), Query Frame = -3 Query: 187 VPLFDSLDDIILDNICDRVKPLVYSKDEKVRLKKRKTQHIIRVPCYKQ*LVVHTRQIIREGDPVLRMVFIVSGRVKRSQGLSKGKIATSILEPGGFLGDELLSWCLRRPFIDRLPASSTTFTCIEYTEAFGLNANDLRYITEHFRYRFANNQLKRTTRYYSSNWRSWAAVNIQFAWRCYRMKIKSDPSIPVILNGGSED-RLRKYAAMFMSLKPHDHLE 840 VPLF +L+D+ILDNICDRVKPLV+SKDEK IIREGDPV RMVF+V GR+KR Q LSKG +ATS++E GGFLGDELLSWCLRRPFIDRLPASS TF C+E EAF L++N L+YIT+HFRY+FAN +LKRT RYYSSNWR+WAAVNIQ WR YR + + P I NG S D RL +YAAMFMS++PHDHLE Sbjct: 504 VPLFHNLNDLILDNICDRVKPLVFSKDEK---------------------------IIREGDPVQRMVFVVRGRIKRIQSLSKGVVATSLIESGGFLGDELLSWCLRRPFIDRLPASSATFVCVEPIEAFSLDSNHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLGWRRYRTRTRG-PMISAAENGNSSDRRLLQYAAMFMSIRPHDHLE 694 HSP 3 Score: 140.584 bits (353), Expect = 6.066e-108 Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = -2 Query: 914 SSFGNELSPTSNPLEVAFSICIVXXXXXXXXXXXGNIQVFLHVVMANRKKLQLXXXXXXXXXXXRQLPSGLRQRVRHFETQTWDTMGGEEEMTWIEELPDGLRRDIKRYLCLDLIKKV 1267 S+FGN+L PTS+ LEV FSICIVL GL+LFTLLIGNIQVFLH VMA ++K+QLR RD+EWWM+RRQLPS LRQRVRH+E Q W T+GGE+EM I++LP+GLRRDIKR+LCLDLIKKV Sbjct: 387 STFGNDLEPTSHWLEVMFSICIVLAGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQRVRHYERQKWATLGGEDEMELIKDLPEGLRRDIKRFLCLDLIKKV 504 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 20
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BLAST of g.barbadense_cottongen_reftransV1_0097525 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097525 ID=g.barbadense_cottongen_reftransV1_0097525; Name=g.barbadense_cottongen_reftransV1_0097525; organism=Gossypium barbadense; type=contig; length=3143bpback to top |