g.barbadense_cottongen_reftransV1_0097514, g.barbadense_cottongen_reftransV1_0097514 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0097514
Unique Nameg.barbadense_cottongen_reftransV1_0097514
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3128
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana GN=OEP80 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.360e-46
Identity = 100/256 (39.06%), Postives = 146/256 (57.03%), Query Frame = 2
Query:  341 TGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWV------AQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            T  PLS +IGS    H NLFG ++KL+VS ++G  DS   + Y  P   W+        +  ++Q+S +P   VHG   DN S      + + R + G++ + P   KW+ T  + F++     +  + I +D    P+T SG  HD  ++ K ES Y  + +   + F   +EQG+PVL +WL FNR    A KGI +GPA  L SL+GG +VG  +P++AF IGG  SVRGY EGAVGSGRS +V + E++FP+
Sbjct:  412 TSGPLSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDP---WIEGDDKRTSRSIMVQNSRTPGNLVHGNQPDNSS------LTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGARDEQGNPIIKDFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGRARKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPV 658          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.994e-42
Identity = 97/261 (37.16%), Postives = 144/261 (55.17%), Query Frame = 2
Query:  341 TGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWV------AQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPLVCNCF 1105
            T  PLS +IGS    H N+FG ++KL++S ++G  DS   + Y  P   W+        +  ++Q+S +P   +HG           G + + R + G++ + P   KWS T  + F++     D  + I RD     +T SGNA+D  ++ K ES Y  + + S + F   IEQG+P+L +WL FNR      +G ++GPA LL S +GG + G+ +P++AFAIGG  SVRGY EGAVGSGRS  V + EV+    C  F
Sbjct:  344 TNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQIDSIFRLNYTDP---WIDGDNKRTSRTIMVQNSRTPGTLIHG-----GDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVS----CRMF 592          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.362e-42
Identity = 97/261 (37.16%), Postives = 144/261 (55.17%), Query Frame = 2
Query:  341 TGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWV------AQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPLVCNCF 1105
            T  PLS +IGS    H N+FG ++KL++S ++G  DS   + Y  P   W+        +  ++Q+S +P   +HG           G + + R + G++ + P   KWS T  + F++     D  + I RD     +T SGNA+D  ++ K ES Y  + + S + F   IEQG+P+L +WL FNR      +G ++GPA LL S +GG + G+ +P++AFAIGG  SVRGY EGAVGSGRS  V + EV+    C  F
Sbjct:  344 TNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQIDSIFRLNYTDP---WIDGDNKRTSRTIMVQNSRTPGTLIHG-----GDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVS----CRMF 592          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: TC753_ARATH (Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.097e-9
Identity = 59/200 (29.50%), Postives = 87/200 (43.50%), Query Frame = 2
Query:  539 GVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFS------RFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLG----------PAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            GV     +NF+R        S+F+ GL + E  +   SS  +   +  RLL     S     DG P T SG   D M  L  ++   + N    +      R   Q++QG+ + SK+  FNR +   +K I+L           P  L+     G  VGD+  Y AF +GG  SVRGY  G +G+ R+      E+  P+
Sbjct:  564 GVKANITENFTRQ-------SKFTYGLVMEEITTRDESSHIAANGQ--RLLPSGGISA----DGPPTTLSGTGVDRMAFL--QANITRDNTKFVNGAVVGQRTVFQVDQGLGIGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPV 748          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: TOC75_PEA (Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 7.120e-9
Identity = 59/200 (29.50%), Postives = 87/200 (43.50%), Query Frame = 2
Query:  539 GVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSF------SRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKL----------GPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            GV     +NFSR        S+F+ GL + E  +   S+      +  R+L +   S     DG P T SG   D M  L  ++   + N          SR   Q++QG+ V S +  FNR +   +K ++L           P  L+     G  VGD+  Y AF +GG  SVRGY  G +G+ R+ L    E+  P+
Sbjct:  555 GVKANITENFSRQ-------SKFTYGLVMEEIITRDESNHICSNGQ--RVLPNGAISA----DGPPTTLSGTGIDRMAFL--QANITRDNTRFVNGTIVGSRNMFQVDQGLGVGSNFPFFNRHQLTVTKFLQLMSVEEGAGKSPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAARNILELAAEIRIPI 739          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: TOC75_ORYSJ (Protein TOC75, chloroplastic OS=Oryza sativa subsp. japonica GN=TOC75 PE=2 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 1.224e-8
Identity = 46/145 (31.72%), Postives = 68/145 (46.90%), Query Frame = 2
Query:  722 LDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFS------RFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLG----------PAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPLVCNCFI 1108
            +DG P T SG   D M  L  ++   + N    +      R   Q++QG+ + SK   FNR +   +K + L           PA L+        VGD+  Y AF +GG  SVRGYG G +G+ R+ L   +E+  P V N ++
Sbjct:  611 MDGPPTTLSGTGIDRMAFL--QANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIP-VRNTYV 752          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Match: TC754_ARATH (Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana GN=TOC75-4 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 9.071e-7
Identity = 46/184 (25.00%), Postives = 83/184 (45.11%), Query Frame = 2
Query:  623 LNEPASSKWSSTTSVKFENVRLLSDDDHSITRD-----------LDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFS------RFTMQIEQGIPVLSKWLIFNRFK-----FVASKGIKLG------PAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            + E  + +   T  V FE + +  D++  I+ +           ++G P T SG   D +  L  ++   + N    +      +   Q++QG+ + + + +FNR +     F+  K ++ G      P  +L    GG I GD+  Y  FA+GG  SVRGY  G +G+ ++ L    E+  P+
Sbjct:  147 ITENLTRQRELTYGVMFEEI-ITRDENRRISENGLLLSPDGGISINGPPTTLSGTGIDHIATL--QANITRDNTKLVNGAVVGEKNIFQVDQGLGIGNNFPLFNRHQLSLTSFIQLKQVEEGSDKPQPPVLVLHGRYGGCI-GDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPV 326          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: B9GHL6_POPTR (Chloroplast outer membrane family protein OS=Populus trichocarpa GN=POPTR_0001s22300g PE=4 SV=2)

HSP 1 Score: 500.36 bits (1287), Expect = 1.890e-164
Identity = 232/285 (81.40%), Postives = 268/285 (94.04%), Query Frame = 2
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKS+HAGKAKID NVDFTHK+CA++ LPSLR+TGSPLSL+IGSLCIKHPNLFGGSEKLDVSWDKGLYDSN+++A+RRPRP+W++Q+CFV+QHS SPEIGVHG P+DNFSRSGSGGVNLSR SVGLD NEPA+S WSSTTS+KFE+V++++D   SITRD+DGFP+T SG+ HD+MVVLKQESQYAKAN+ SF +F MQIEQGIP+LSKWLIFN+FKF+A+KG+KLGPAFLL SL GGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVAN+E+TFPL
Sbjct:    1 MGAQKSVHAGKAKIDANVDFTHKLCAALRLPSLRSTGSPLSLIIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNVIIAFRRPRPEWLSQKCFVIQHSFSPEIGVHGTPIDNFSRSGSGGVNLSRISVGLDRNEPATSDWSSTTSIKFEHVQIVNDSWRSITRDIDGFPLTRSGSPHDNMVVLKQESQYAKANDRSFYQFRMQIEQGIPILSKWLIFNKFKFIATKGVKLGPAFLLASLAGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANSELTFPL 285          

HSP 2 Score: 95.1301 bits (235), Expect = 1.610e-17
Identity = 41/52 (78.85%), Postives = 48/52 (92.31%), Query Frame = 2
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNL 2317
            V GNPAMRQGKPGSGVG GYGLRFKSP+GHF V++AIN FQQ+T+YFG++NL
Sbjct:  307 VPGNPAMRQGKPGSGVGLGYGLRFKSPIGHFMVNHAINDFQQRTVYFGISNL 358          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: D7LMI0_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484837 PE=4 SV=1)

HSP 1 Score: 499.59 bits (1285), Expect = 5.212e-164
Identity = 237/288 (82.29%), Postives = 262/288 (90.97%), Query Frame = 2
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGS---LCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAG+AKIDVNVDFTHK+C S+M P+ R+T SPLSLVIG    LCIKHPNLFGGSEKLDVSWDKGLYDSN+LVA+RRPRP+W  QQCF +QHSLSPEIGVHG PVDNFSRSGSGGVNLS+ +VGLDL+EPASSKWSSTTSVKFE+VR ++DD  +ITRDLDGFP+TCSGN HDSMVVLKQES++AKA +   S F+MQIEQGIPV+SKWLIFNRFKFVASKG++ GPAFLL SLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTE+  PL
Sbjct:    1 MGAQKSIHAGRAKIDVNVDFTHKLCTSLMFPAFRDTSSPLSLVIGRQVFLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAFRRPRPEWRPQQCFFIQHSLSPEIGVHGTPVDNFSRSGSGGVNLSKLAVGLDLSEPASSKWSSTTSVKFEHVRPINDDGRAITRDLDGFPITCSGNTHDSMVVLKQESRFAKATDQGLSHFSMQIEQGIPVVSKWLIFNRFKFVASKGVRFGPAFLLASLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTELAVPL 288          

HSP 2 Score: 82.4185 bits (202), Expect = 2.366e-13
Identity = 46/54 (85.19%), Postives = 49/54 (90.74%), Query Frame = 2
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNP+MRQGKPG G GFGYGLRFKSP+GH QVDYA+NAF QKTLYFGVTNLAS
Sbjct:  310 VPGNPSMRQGKPGYGYGFGYGLRFKSPLGHLQVDYAMNAFNQKTLYFGVTNLAS 363          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: I3S6C8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 498.819 bits (1283), Expect = 7.617e-164
Identity = 234/286 (81.82%), Postives = 264/286 (92.31%), Query Frame = 2
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPLV 1093
            MGAQKSIHAGKAKIDVNVDFTHK+CAS+M P+LR+  +PL LVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRP+W+AQQ FV+QHSLSPEI VHGIP++NFSRSGSGGVNLS+ SVGLDL EP S+KWSSTT +KFE+VR L+DD  +I+RD DGFP+TCSG+ HDSMVVLKQES++AKAN+ SF  F +QIEQGIPVLSKW++FNRFKFVASKG+KLGPAFLLT LTGGSIVGDMAPYQAF++GGLGSVRGYGEGAVGSGRSCLVAN+E+T PL 
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKLCASLMFPTLRSYENPLRLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPEWLAQQSFVLQHSLSPEIAVHGIPINNFSRSGSGGVNLSKLSVGLDLKEPMSTKWSSTTGIKFEHVRPLNDDGRAISRDYDGFPLTCSGSTHDSMVVLKQESRFAKANDRSFFHFNLQIEQGIPVLSKWILFNRFKFVASKGVKLGPAFLLTRLTGGSIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGRSCLVANSELTLPLT 286          

HSP 2 Score: 101.293 bits (251), Expect = 1.739e-19
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 2
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNPA+RQGKPGSGVG GYGLRFKS  GHFQVDYA+NAFQQKTLYFG++NLAS
Sbjct:  307 VPGNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQKTLYFGLSNLAS 360          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: B9HQ67_POPTR (Chloroplast outer membrane family protein OS=Populus trichocarpa GN=POPTR_0009s02220g PE=4 SV=1)

HSP 1 Score: 496.893 bits (1278), Expect = 4.294e-163
Identity = 241/285 (84.56%), Postives = 268/285 (94.04%), Query Frame = 2
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVDFTHK+CAS+MLPSLRNTGSPLSL+IGSLCIKHPNLFGGSEKLDVSWDKGL DSN+ + YRRPRP+W+ Q+CFV+QHS SPEIGVHG P+DNFSRSGSG VNLSR SVGLD NEPASS WSS+TS+KFE+V+L++DD  SITRD+DGFPVTCSG+ HDSM+VLKQESQ AKAN+HSFSRF+MQIEQGIP+LSKWLIFN+FKF A+KG+KLGPAFLL SLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLV N+E+TFPL
Sbjct:    1 MGAQKSIHAGKAKIDVNVDFTHKLCASLMLPSLRNTGSPLSLIIGSLCIKHPNLFGGSEKLDVSWDKGLSDSNVSITYRRPRPEWLCQKCFVIQHSFSPEIGVHGTPIDNFSRSGSGDVNLSRLSVGLDRNEPASSDWSSSTSIKFEHVQLVNDDGRSITRDIDGFPVTCSGSPHDSMLVLKQESQCAKANDHSFSRFSMQIEQGIPILSKWLIFNKFKFTATKGVKLGPAFLLASLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVGNSELTFPL 285          

HSP 2 Score: 100.138 bits (248), Expect = 4.596e-19
Identity = 45/52 (86.54%), Postives = 49/52 (94.23%), Query Frame = 2
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNL 2317
            V GNPAMRQGKPGSGVG GYGLRFKSP GHFQVDYAIN+FQQKT+YFG++NL
Sbjct:  307 VPGNPAMRQGKPGSGVGLGYGLRFKSPAGHFQVDYAINSFQQKTVYFGISNL 358          
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Match: A0A059AA52_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00580 PE=4 SV=1)

HSP 1 Score: 494.967 bits (1273), Expect = 2.488e-162
Identity = 233/285 (81.75%), Postives = 262/285 (91.93%), Query Frame = 2
Query:  236 MGAQKSIHAGKAKIDVNVDFTHKICASMMLPSLRNTGSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPQWVAQQCFVMQHSLSPEIGVHGIPVDNFSRSGSGGVNLSRFSVGLDLNEPASSKWSSTTSVKFENVRLLSDDDHSITRDLDGFPVTCSGNAHDSMVVLKQESQYAKANEHSFSRFTMQIEQGIPVLSKWLIFNRFKFVASKGIKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTEVTFPL 1090
            MGAQKSIHAGKAKIDVNVD +HK+C+S+MLPSLR + SPLS +IGSLCIKHPNLFGGSEKLDVSWDKGLYDSN L+AYRRPRP+W++QQ FV+QHS+SPEIGVHG P DNFS+SGSGGVNLS+FSVGLDL EPA+S WSSTTS++F++VR L+D+  SI+RDLDG PVTCSGN HDSMVVLKQESQYAKANE SF R   QIEQGIP+LSKW+IFN+ KFVASKG+KLGPAFLLTSLTGGSIVGDMAPYQAFAIGGL SVRGYGEGA+G+GRSCLVAN E+TFPL
Sbjct:    1 MGAQKSIHAGKAKIDVNVDLSHKLCSSLMLPSLRGSQSPLSFIIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNALIAYRRPRPEWLSQQSFVIQHSVSPEIGVHGTPTDNFSQSGSGGVNLSQFSVGLDLTEPANSNWSSTTSIRFKHVRPLNDEGRSISRDLDGLPVTCSGNPHDSMVVLKQESQYAKANEDSFFRIRFQIEQGIPLLSKWIIFNKLKFVASKGVKLGPAFLLTSLTGGSIVGDMAPYQAFAIGGLSSVRGYGEGAIGAGRSCLVANNELTFPL 285          

HSP 2 Score: 95.5153 bits (236), Expect = 1.242e-17
Identity = 41/54 (75.93%), Postives = 48/54 (88.89%), Query Frame = 2
Query: 2162 VSGNPAMRQGKPGSGVGFGYGLRFKSPVGHFQVDYAINAFQQKTLYFGVTNLAS 2323
            V GNP++RQGKPGSG+G GYGLRFKS  GHFQ+DYAINAF QKT+YFG++NL S
Sbjct:  307 VPGNPSLRQGKPGSGIGLGYGLRFKSQFGHFQIDYAINAFHQKTVYFGISNLTS 360          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
OEP80_ARATH9.360e-4639.06Outer envelope protein 80, chloroplastic OS=Arabid... [more]
OEP80_ORYSJ1.994e-4237.16Outer envelope protein 80, chloroplastic OS=Oryza ... [more]
OEP80_ORYSI2.362e-4237.16Outer envelope protein 80, chloroplastic OS=Oryza ... [more]
TC753_ARATH1.097e-929.50Protein TOC75-3, chloroplastic OS=Arabidopsis thal... [more]
TOC75_PEA7.120e-929.50Protein TOC75, chloroplastic OS=Pisum sativum GN=T... [more]
TOC75_ORYSJ1.224e-831.72Protein TOC75, chloroplastic OS=Oryza sativa subsp... [more]
TC754_ARATH9.071e-725.00Protein TOC75-4, chloroplastic OS=Arabidopsis thal... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0097514 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9GHL6_POPTR1.890e-16481.40Chloroplast outer membrane family protein OS=Popul... [more]
D7LMI0_ARALL5.212e-16482.29Putative uncharacterized protein OS=Arabidopsis ly... [more]
I3S6C8_LOTJA7.617e-16481.82Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]
B9HQ67_POPTR4.294e-16384.56Chloroplast outer membrane family protein OS=Popul... [more]
A0A059AA52_EUCGR2.488e-16281.75Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.160.50coord: 182..332
e-value: 3.3E-8
score: 32.8
NoneNo IPR availablePANTHERPTHR12815SORTING AND ASSEMBLY MACHINERY SAM50 PROTEINcoord: 38..332
NoneNo IPR availablePANTHERPTHR12815:SF10OUTER MEMBRANE OMP85 FAMILY PROTEINcoord: 38..332
IPR000184Bacterial surface antigen (D15)PFAMPF01103Bac_surface_Agcoord: 100..332
e-value: 1.1E-10
score: 41.5

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0097514 ID=g.barbadense_cottongen_reftransV1_0097514; Name=g.barbadense_cottongen_reftransV1_0097514; organism=Gossypium barbadense; type=contig; length=3128bp
ATACTGAACACATGGATACATAAATAAGGCTTCTTTCCCTTTCACCAAAG
AAAAACATCACACGGAACACAAGACTCTTGTTTTTCCTTCTTCTTTGTTA
TGCTGTGTCTTTGATATTTTGCACAATTTCGTTTCATTTCATGCGAAATG
CAATCTTTGTCTAACTCACAACACTAACCCATTTTTTCCATCCATCCATT
TCCCTTTGCTTAATGGTTTTTTCATCTCTAACTCTATGGGGGCTCAGAAG
AGCATCCATGCAGGCAAAGCCAAGATTGATGTTAATGTTGATTTCACCCA
CAAGATATGTGCTTCTATGATGCTTCCTTCTTTAAGGAACACTGGCAGTC
CTCTATCCCTCGTAATTGGCAGTCTTTGCATTAAACACCCAAATTTATTT
GGTGGAAGTGAGAAGCTTGATGTATCATGGGATAAGGGGTTATATGATTC
AAATATCTTGGTAGCTTACAGGAGGCCTCGACCACAATGGGTTGCTCAAC
AATGTTTTGTTATGCAGCACTCACTTTCACCTGAGATTGGTGTTCATGGT
ATACCTGTGGACAATTTCTCTCGTTCGGGGAGTGGAGGTGTGAATTTGTC
TCGATTTTCAGTTGGATTGGATCTAAATGAACCTGCAAGTTCTAAATGGA
GCAGCACAACAAGTGTAAAGTTTGAGAATGTTCGCCTGTTGAGTGATGAT
GACCACTCCATTACCAGAGATCTTGATGGTTTTCCTGTCACTTGCAGTGG
CAATGCTCATGACAGTATGGTAGTCTTAAAGCAAGAATCTCAATATGCGA
AGGCAAACGAGCATAGTTTTTCTCGTTTTACTATGCAAATAGAACAAGGG
ATTCCAGTTCTATCCAAGTGGTTAATCTTCAACCGTTTCAAATTTGTTGC
ATCAAAGGGCATCAAACTTGGACCGGCCTTTCTCTTGACAAGCCTGACAG
GTGGTTCGATTGTGGGAGATATGGCTCCATATCAAGCATTTGCAATCGGT
GGTCTAGGCAGCGTGAGAGGGTATGGTGAAGGTGCCGTTGGATCTGGAAG
ATCATGTTTGGTTGCTAATACTGAAGTGACATTTCCTTTGGTATGTAATT
GCTTTATTATAAAATAGAGGGCACTGCATCTAACAATCTATATTTTGTTA
TTTTTCACACATCTATCATCTTTGATAGCTGTTTAATGGCATGTGTAACT
GTTATAGTTCTGTATGTACCATTTGAAATTTCTTTAACTTCAAAAGATGG
CTGTTAGATTAGGAGAGTGATTAGAAGCCAAACCAAACTGAAAATTAATA
ACGTACTGATAATTATCCCTGGAAATTTATTTTAAAATATAGGATGAAGT
TGTGTTTAAATAAAATATGGAATGATGAAATTCCTATACATGCTACACTC
AAAGTACTTTATGGTATATATAAAAATTATATTGTATATTTTGATTTGAT
TATATCAATTAAAAGAGAAAGGCCCTGAAAAATCCCGAGAGGTAATTAAA
AACCAAGATTTTGTTTTTGCTGCTATTCAGTTCTAAAATTTGTGAATGGG
AATTTTTGGTTATGTCATTGCATATGTGTTGACTTAATTTTGCTGCAATC
AGAGCAAAATGTTGGAAGGTTCTGTTTTCCTGGACTGTGGAACTGATCTG
GGCTCGGGTCGGCTTGTACCTGGTGAGTCCCATTCATCTACTTCCTTATG
AAGTTGTGATCTTAATATGCTTCTAGTTTTCACTGAACATTGTTTCTGAC
CTTTAGTTAATTCTCAACTAGTTGCATTGTGTATCACATGTTTAAAACAG
CCTGATTTAGCTTTCTGCAACTCAGCTTTTGCATTTATCATGACTATGAG
CACCCCGAAATTCGTCAATGCCTGCTGATATCATCATCACTAGAATATAT
GGTTGTTTCAGCGAGGTAGTTGATTTTAGATTTTAGGTTCTGGTGATGTG
ATGCAACGAATCTTGAATCTTTGGGCTTGTGGATACTTTGAGAACAAATT
ATTCCTGTAACATCGATTTGCTTCTTATATGCCTTAGGTATGTGAAGTTA
GACATTCTTGCTATTCTAGGAACACGCCGTTGCCAATATTTACATTTATG
GAAGCCATTATCAGTGAAGCGTAACTACCATTCCAGGATTTATTACCGGT
TTAATTTATGAGTTTCAGGAAATCCAGCCATGAGACAAGGTAAACCAGGA
TCTGGAGTTGGGTTCGGGTACGGTCTTCGGTTCAAGTCTCCAGTTGGTCA
TTTCCAGGTTGATTATGCCATCAATGCCTTTCAACAAAAGACTCTATACT
TTGGCGTCACAAATCTTGCATCTTGAATTCACTTTAAAACCATACACAAG
CTGCCAAATTTCTTCTCATTGTGTAGCGGAAAAAGAAAAAGAAATGACAA
GATTGGGGGACGCTGCACACTGACATGTTGATTCATGGAGAAACACTTGA
AGCTTTGCCCCATAGCGTAGTTGCAATTTCGTGGGGGAAAAAGATGATGG
CGTCATTGATTGTTAAAAGCAGTAGAGACAGGTAGGAACATTGAAATTAA
ACGGTGTCGAGGCTGAAATTCTTTCCACAAATAGAAGCTGCTCAAATACC
ACTTCACTTTCTTCTTTACATTTATTTTCCTTAACTGTAACAAAATTTTC
AAACCAAATTTAACTCACTTTCAAAGCATGATATTCAGTAGGGGGTACAA
AATCAAAATTATAAAATCCGTACCCATTTTCTTTTAGATCAGTCACTTTT
ATTAATATTTTAGAAAATAAAAAATCACTAAACTTTTTACTTGTGAACCT
CTAAGAAGGATGGCTTAAACATTCCGTAACATTTAATCACAACTGATTAC
AACATTAACACATGAAATCTACTGACCTTATTGGCTTATTCCCATGACAA
ATCAAGCCAAGCCAAACCAATCTCAACTCTACCACGGAGATGGAGCAATT
TTATGACAAGAAAATAAAGCCATAACATCTCGTGCTGTAATTCAATATAT
ATATAATATAGTATATACACACTATAACAAGACCCGGGTGGATGGCAGCC
CCAACAGGTTTGTCATCACAAATACTTCCTTACAGATCAACGGCCTGTGC
CATATTTTTTGTAGGATTTGAGTCCCCA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000184Bac_surfAg_D15
Vocabulary: Cellular Component
TermDefinition
GO:0019867outer membrane