g.barbadense_cottongen_reftransV1_0097513, g.barbadense_cottongen_reftransV1_0097513 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0097513
Unique Name	g.barbadense_cottongen_reftransV1_0097513
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2246

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
At06	chromosome	g.barbadense_cottongen_reftransV1_0097513:1..2246 . At06:7041437..7063696 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy Swiss-Prot
Match: YTNL_BACSU (Uncharacterized hydrolase YtnL OS=Bacillus subtilis (strain 168) GN=ytnL PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.786e-45
Identity = 95/216 (43.98%), Postives = 135/216 (62.50%), Query Frame = 3

Query:  426 GLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWI-GTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            G+RR +H+ PEL+ EE+ET+  ++  L    I+ R    KTG+ A I G    P +A+RAD+DALPI+E     + SK  G MHACGHD H A L+GAA +LK  +  LKG + ++FQPAEEAG GA ++I DG L+ ++A+  +H   +   G +G + GPL+A    F+  I G+   A  PH+  DPI+ AS  +++LQ IVSR  NPL S +
Sbjct:   43 GIRRHLHQYPELSKEEFETTAFIKKCLKEKGIQIRPTALKTGVFADIAGESEGPAIALRADIDALPIEEKTGLPYASKHKGIMHACGHDFHTAALLGAAFLLKENQDSLKGKIRLLFQPAEEAGAGATKVIEDGQLDGIDAVIGLHNKPDIAVGTVGLKTGPLMAAVDRFKVEIEGKGAHAALPHNGFDPIIGASQLIVALQTIVSRNVNPLQSAI 258

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BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy Swiss-Prot
Match: YHAA_BACSU (Putative amidohydrolase YhaA OS=Bacillus subtilis (strain 168) GN=yhaA PE=3 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 7.421e-44
Identity = 95/221 (42.99%), Postives = 125/221 (56.56%), Query Frame = 3

Query:  414 EWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGP-PFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEE-AGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            E +  +RR  H  PEL+F+E +T+  + S  + + +  R  +   G+ A I    P P VA+RAD DALPIQ+  +  + SKV G MHACGHD H A L+  AK+L    H LKGT ++I Q AEE    GAK MI DG LEN + IF  H+    P G I  RPG ++A    F   + G+ G    PH + D +L  S  V SLQ IVSR+ NP+ S V
Sbjct:   19 EEMVEIRRHFHMYPELSFQEEKTAAFIASYYESLGVPIRTNVGGRGVLANIEGSEPGPTVALRADFDALPIQDEKDVPYASKVPGVMHACGHDGHTAALLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGAKPMIDDGCLENTDVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGKGGHGAHPHDTKDAVLIGSQIVSSLQHIVSRKVNPIQSAV 239

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BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy Swiss-Prot
Match: Y100_SYNY3 (Uncharacterized hydrolase sll0100 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0100 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.532e-38
Identity = 85/216 (39.35%), Postives = 112/216 (51.85%), Query Frame = 3

Query:  429 LRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGG--PPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            +RR +H +PEL+ +EY+T+  V   L    +     + KTG+   +   G  P  +AIR DMDALPI+E V     S+  G MHACGHD H  + +G A +L    H L G V  +FQPAEE   GA  MI DGA++ V  I  VHV    P   +G R G L A        I G  G    PH ++D I  A+  + +LQ  +SR  NPL   V
Sbjct:   17 IRRHLHAHPELSGQEYQTAAYVAGVLSSCGLHVEEAIGKTGVVGQLSGKGDDPRLLAIRTDMDALPIEEMVSLPFASRHPGVMHACGHDIHTTLGLGTAMVLSQMGHRLPGDVRFLFQPAEEIAQGASWMIQDGAMKGVSHILGVHVFPSIPAQQVGIRYGALTAAADDLEIFIQGESGHGARPHEAIDAIWIAAQVITALQQAISRTQNPLRPMV 232

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BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy Swiss-Prot
Match: HIPO_CAMJE (Hippurate hydrolase OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168) GN=hipO PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.421e-36
Identity = 86/218 (39.45%), Postives = 118/218 (54.13%), Query Frame = 3

Query:  429 LRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGG-PPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGS---RPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            +R +IHENPEL F+E  T+KLV  +L     E    + KTG+   +  G     + +RADMDALP+QE     +KSK    MHACGHD H   L+ AAK L ++     G + + FQPAEE   GAK MI DG  E  ++ + V   H  P G       + G ++A    +   + GR G   +P  + DPI AAS  +++LQ IVSR  +P +S V
Sbjct:   17 IRHQIHENPELGFDELCTAKLVAQKLKEFGYEVYEEIGKTGVVGVLKKGNSDKKIGLRADMDALPLQECTNLPYKSKKENVMHACGHDGHTTSLLLAAKYLASQN--FNGALNLYFQPAEEGLGGAKAMIEDGLFEKFDSDY-VFGWHNMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLIVALQSIVSRNVDPQNSAV 231

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BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy Swiss-Prot
Match: AMAA_GEOSE (N-acyl-L-amino acid amidohydrolase OS=Geobacillus stearothermophilus GN=amaA PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.808e-35
Identity = 87/226 (38.50%), Postives = 120/226 (53.10%), Query Frame = 3

Query:  399 KPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRM-DIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEA-GNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            K D + W    RR +H +PEL+F+E +T++ V   L     +E   P   + +   IG      VAIRADMDALPIQE   +E  SK  G MHACGHD H AML+G AKI       ++G +  +FQ AEE    GA+ M+  G ++ V+ +   H+      G IG   GP++A    F   I G+ G    PH ++D I   +  V +LQ IVSR  +PL+  V
Sbjct:   14 KTDVIAW----RRHLHAHPELSFQEEKTAQFVYETLQSFGHLELSRPTKTSVMARLIGQQPGRVVAIRADMDALPIQEENTFEFASKNPGVMHACGHDGHTAMLLGTAKIFSQLRDDIRGEIRFLFQHAEELFPGGAEEMVQAGVMDGVDVVIGTHLWSPLERGKIGIVYGPMMAAPDRFFIRIIGKGGHGAMPHQTIDAIAIGAQVVTNLQHIVSRYVDPLEPLV 235

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BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: A0A0D2U6L3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G051100 PE=4 SV=1)

HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0
Identity = 334/349 (95.70%), Postives = 337/349 (96.56%), Query Frame = 3

Query:  156 IFIPFLANNFLVFVNXXXXXXXXXXXXGNQYTTFFNAISSSTNPKASLNSGKNQTTSSLRSSSFCYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV*VLFYKFLQLPKLGEIFLNLFKSCNANACRSSRSLLSMEAIILT 1202
            IFIPF ANNFLVFVNSITSSS      GNQYTTFFNAISSSTNPKASLNSGKNQTTSSL SSSFC VWDVTCSEEVLGLA++PDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAW+GTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAV SGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV VLFYKFLQLPK GEIFLNLFKSCNANACRSSRSLLSMEAIILT
Sbjct:   14 IFIPFFANNFLVFVNSITSSS------GNQYTTFFNAISSSTNPKASLNSGKNQTTSSLISSSFCDVWDVTCSEEVLGLAQEPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWVGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVFSGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQVRVLFYKFLQLPKHGEIFLNLFKSCNANACRSSRSLLSMEAIILT 356

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BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: A0A0D2SMX4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G051100 PE=4 SV=1)

HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0
Identity = 292/305 (95.74%), Postives = 295/305 (96.72%), Query Frame = 3

Query:  156 IFIPFLANNFLVFVNXXXXXXXXXXXXGNQYTTFFNAISSSTNPKASLNSGKNQTTSSLRSSSFCYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            IFIPF ANNFLVFVNSITSSS      GNQYTTFFNAISSSTNPKASLNSGKNQTTSSL SSSFC VWDVTCSEEVLGLA++PDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAW+GTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAV SGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV
Sbjct:   14 IFIPFFANNFLVFVNSITSSS------GNQYTTFFNAISSSTNPKASLNSGKNQTTSSLISSSFCDVWDVTCSEEVLGLAQEPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWVGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVFSGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 312

HSP 2 Score: 253.447 bits (646), Expect = 0.000e+0
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 1

Query: 1366 QVIVEQANVFRCWATVDFFEKESTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPATFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEHG 1731
            +VIVEQANVFRCWATVDFFEKESTIYPPTVND+RMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPA FYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNE G
Sbjct:  354 EVIVEQANVFRCWATVDFFEKESTIYPPTVNDNRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPAAFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEQG 475

HSP 3 Score: 91.6633 bits (226), Expect = 0.000e+0
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 2

Query: 1157 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNANFYNLLQRIEEV 1291
            QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNA+FYNLLQRIEEV
Sbjct:  311 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNASFYNLLQRIEEV 355

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: A0A061FG60_THECC (IAA-leucine resistant-like gene 6 isoform 1 OS=Theobroma cacao GN=TCM_035141 PE=4 SV=1)

HSP 1 Score: 512.686 bits (1319), Expect = 0.000e+0
Identity = 267/309 (86.41%), Postives = 283/309 (91.59%), Query Frame = 3

Query:  156 IFIPFLANNFLVFVNXXXXXXXXXXXXGNQY-TTFFNAISSSTNPKASLNSGKNQTTSSLRSSSF---CYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            IF P  ANNFLV+VNSITSSSS S    ++Y T FF+AI+S  N +ASL SG+NQT+SS  ++S    C VWDV CSE VLG+ARKP+NVEWIKGLRRKIHENPELAFEEYETSKLV +ELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKV GKMHACGHDAHVAMLVGAAKILKNREHLLKGTVI++FQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPT IIGSRPGPLLAGCGFFRAVISGRKGLAG+PHHSVDPILAASAAVISLQGIVSRESNPLDSQV
Sbjct:   14 IFTPLFANNFLVYVNSITSSSSSS---DDEYATNFFDAITS-INSRASLKSGRNQTSSSSSATSGPSSCKVWDVACSEAVLGVARKPENVEWIKGLRRKIHENPELAFEEYETSKLVCAELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVPGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVILLFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTAIIGSRPGPLLAGCGFFRAVISGRKGLAGNPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 318

HSP 2 Score: 241.121 bits (614), Expect = 0.000e+0
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 1

Query: 1366 QVIVEQANVFRCWATVDFFEKESTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPATFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEHG 1731
            +VIVEQA+VFRC ATVDFFEKE TIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPA FYYIG+RNETLGS HTGHSPYFMIDEDVLPIGAAVHATIAERYL EHG
Sbjct:  360 EVIVEQASVFRCSATVDFFEKEYTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPAAFYYIGIRNETLGSVHTGHSPYFMIDEDVLPIGAAVHATIAERYLIEHG 481

HSP 3 Score: 90.5077 bits (223), Expect = 0.000e+0
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 2

Query: 1157 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNANFYNLLQRIEEV 1291
            QVVSVTSFNGGNNLDMIP+TVVIGGTFRAFSNA+FYNLLQRIEEV
Sbjct:  317 QVVSVTSFNGGNNLDMIPDTVVIGGTFRAFSNASFYNLLQRIEEV 361

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: A0A0D2S7M0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G246300 PE=4 SV=1)

HSP 1 Score: 498.434 bits (1282), Expect = 0.000e+0
Identity = 243/279 (87.10%), Postives = 258/279 (92.47%), Query Frame = 3

Query:  240 NQYTTFFNAISSSTNPKASLNSGKNQT--TSSLRSSSFCYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            N+Y+T F+AI+S  NPKA LNSGKN T  + S  SS+ C VWDV CSE VL LARKP+NVEWIKGLRRKIHENPELAFEEYETSKLVR+ELDRM+IEYRYPLAKTGIRAWIGTG PPFVAIRADMDALPIQE V+WEHKSKVAGKMHACGHDAHVAML+GAAKILKNRE  LKGTVI++FQPAEEAGNGAKRMIGDGALE+VEAIFAVHVSHEHPT IIGSRPGPLLAGCGFFRAVISGRKGLAG PH+SVDPILAASAAVISLQGIVSRESNPLDSQV
Sbjct:   40 NEYSTLFDAIAS-VNPKAPLNSGKNHTPPSGSRGSSTSCEVWDVACSEAVLSLARKPENVEWIKGLRRKIHENPELAFEEYETSKLVRTELDRMEIEYRYPLAKTGIRAWIGTGSPPFVAIRADMDALPIQEGVQWEHKSKVAGKMHACGHDAHVAMLIGAAKILKNREQHLKGTVILLFQPAEEAGNGAKRMIGDGALEDVEAIFAVHVSHEHPTAIIGSRPGPLLAGCGFFRAVISGRKGLAGDPHNSVDPILAASAAVISLQGIVSRESNPLDSQV 317

HSP 2 Score: 231.106 bits (588), Expect = 0.000e+0
Identity = 107/122 (87.70%), Postives = 115/122 (94.26%), Query Frame = 1

Query: 1366 QVIVEQANVFRCWATVDFFEKESTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPATFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEHG 1731
            +V+VEQA+VFRC  TVDFFEK+STIYPPTVNDD MYEHVKKVATDLLGP NFRVVPPMMGAEDFSFY+++VPA FYYIGVRNETLGS HTGHSPYFMIDEDVLPIGAAVHA+IAERYLNE G
Sbjct:  359 EVVVEQASVFRCSTTVDFFEKDSTIYPPTVNDDHMYEHVKKVATDLLGPTNFRVVPPMMGAEDFSFYTEIVPAAFYYIGVRNETLGSIHTGHSPYFMIDEDVLPIGAAVHASIAERYLNERG 480

HSP 3 Score: 87.0409 bits (214), Expect = 0.000e+0
Identity = 41/45 (91.11%), Postives = 45/45 (100.00%), Query Frame = 2

Query: 1157 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNANFYNLLQRIEEV 1291
            QVVSVTSFNGGNNL+MIP+TVVIGGTFRAFSNA+FYNLLQRI+EV
Sbjct:  316 QVVSVTSFNGGNNLNMIPDTVVIGGTFRAFSNASFYNLLQRIQEV 360

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: B9GU29_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08300g PE=4 SV=2)

HSP 1 Score: 452.21 bits (1162), Expect = 0.000e+0
Identity = 220/263 (83.65%), Postives = 239/263 (90.87%), Query Frame = 3

Query:  294 SLNSG-KNQTTSS---LRSSSFCYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            SLNS  KNQ+ S+   + SS+ C VW   CSE VL LAR+PD V W+K +RRKIHENPELAFEE +TS+LVR ELD+M IEYRYPLAKTGIRAWIGTGGPPFVA+RADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILK+REHLL+GTVI++FQPAEEAGNGAKRMI DGAL++VEAIFAVHVSHEHPT IIGSRPG LLAGCGFFRAVISG+KG AGSPHHSVDPILAASAAVISLQGIVSRE+NPLDSQV
Sbjct:   52 SLNSRPKNQSKSTAEKVPSSTGCEVWTKACSEAVLALARRPDTVTWLKSVRRKIHENPELAFEEVKTSELVRYELDKMGIEYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKSREHLLQGTVILLFQPAEEAGNGAKRMIADGALDDVEAIFAVHVSHEHPTAIIGSRPGALLAGCGFFRAVISGKKGRAGSPHHSVDPILAASAAVISLQGIVSRETNPLDSQV 314

HSP 2 Score: 233.802 bits (595), Expect = 0.000e+0
Identity = 110/122 (90.16%), Postives = 114/122 (93.44%), Query Frame = 1

Query: 1366 QVIVEQANVFRCWATVDFFEKESTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPATFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEHG 1731
            +VIVEQA+VFRC ATVDFFEKESTIYPPTVNDD MYEHV+KVATDLLGP NFRVVPPMMGAEDFSFY+QVVPA FYYIGVRNETLGS HTGHSPYFMIDEDVLPIGAA HA IAERYL EHG
Sbjct:  356 EVIVEQASVFRCSATVDFFEKESTIYPPTVNDDHMYEHVRKVATDLLGPTNFRVVPPMMGAEDFSFYTQVVPAAFYYIGVRNETLGSIHTGHSPYFMIDEDVLPIGAATHAAIAERYLIEHG 477

HSP 3 Score: 80.4925 bits (197), Expect = 0.000e+0
Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = 2

Query: 1157 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNANFYNLLQRIEEV 1291
            QVVSVT+ +GGNNLDMIPETVV+GGTFRA+SN +FY LLQRI+EV
Sbjct:  313 QVVSVTTMDGGNNLDMIPETVVLGGTFRAYSNTSFYQLLQRIKEV 357

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: B9RJ28_RICCO (IAA-amino acid hydrolase ILR1, putative OS=Ricinus communis GN=RCOM_1030570 PE=4 SV=1)

HSP 1 Score: 452.21 bits (1162), Expect = 0.000e+0
Identity = 222/275 (80.73%), Postives = 249/275 (90.55%), Query Frame = 3

Query:  255 FFNAISSSTNPKASLNSGKNQTTSSLR---SSSFCYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            FF  ++S + PK SLNS KNQT+SS     S++ C VW  +CSE VL LA +P+ V W+K +RRKIHENPELAFEE++TS+LVR+ELD+MDI Y++PLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWE+KSKVAGKMHACGHDAHVAML+GAAKILK+REHLLKGTV+++FQPAEEAGNGAKRMIGDGALE+VEAIFAVHVSHEH T +IGSRPGPLLAGCGFFRAVISG+KG AGSPHHSVD ILAASAAVISLQGIVSRESNPLDSQV
Sbjct:   39 FFEKVTSFS-PK-SLNSQKNQTSSSRPPKPSTAACDVWTKSCSEAVLSLAWRPETVSWLKSVRRKIHENPELAFEEFKTSELVRNELDKMDISYKHPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALEDVEAIFAVHVSHEHRTAMIGSRPGPLLAGCGFFRAVISGKKGGAGSPHHSVDTILAASAAVISLQGIVSRESNPLDSQV 311

HSP 2 Score: 228.024 bits (580), Expect = 0.000e+0
Identity = 106/121 (87.60%), Postives = 113/121 (93.39%), Query Frame = 1

Query: 1366 QVIVEQANVFRCWATVDFFEKESTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPATFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEH 1728
            +VIVEQA VFRC ATVDFFE+E TIYPPTVN+D+MYEHV+KVA DLLGP NF+VVPPMMGAEDFSFYSQVVPA FYYIG+RNETLGSTHTGHSPYFMIDEDVLPIGAA HATIAERYL EH
Sbjct:  353 EVIVEQARVFRCSATVDFFEQEYTIYPPTVNNDKMYEHVRKVAIDLLGPANFKVVPPMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAAHATIAERYLIEH 473

HSP 3 Score: 75.8702 bits (185), Expect = 0.000e+0
Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 2

Query: 1157 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNANFYNLLQRIEEV 1291
            QVVSVT+ +GGNN+DMIP+TVV+GGTFRAFSN +FY LL+RI EV
Sbjct:  310 QVVSVTTMDGGNNVDMIPDTVVLGGTFRAFSNTSFYQLLRRINEV 354

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: D5FTG9_POPTO (IAA-amino acid hydrolase (Fragment) OS=Populus tomentosa GN=ILL6 PE=2 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 0.000e+0
Identity = 219/277 (79.06%), Postives = 244/277 (88.09%), Query Frame = 3

Query:  252 TFFNAISSSTNPKASLN-SGKNQTTSSLR---SSSFCYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            +FF++ + +     SLN   KNQ+ S+ +   SS+ C VW   CSE VL LAR+PD V W+K +RRKIHENPELAFEE +TS+LVR ELD+M IEYRYPLAKTGIRAWIGTG PPFVA+RADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAML+GAAKILK+REHLL+GTVI++FQPAEEAGNGAKRMI DGAL++VEAIFAVHVSHEHPT IIGSRPG LLAGCGFFRAVISG+KG AGSPHHSVDPILAASAAVISLQGIVSRE+NPLDSQV
Sbjct:   28 SFFDSTTGN-----SLNFRPKNQSKSTAKKVPSSTGCEVWTKACSEAVLALARRPDTVTWLKSVRRKIHENPELAFEEVKTSELVRYELDKMGIEYRYPLAKTGIRAWIGTGEPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLMGAAKILKSREHLLQGTVILLFQPAEEAGNGAKRMIADGALDDVEAIFAVHVSHEHPTAIIGSRPGALLAGCGFFRAVISGKKGRAGSPHHSVDPILAASAAVISLQGIVSRETNPLDSQV 299

HSP 2 Score: 232.261 bits (591), Expect = 0.000e+0
Identity = 109/122 (89.34%), Postives = 114/122 (93.44%), Query Frame = 1

Query: 1366 QVIVEQANVFRCWATVDFFEKESTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPATFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEHG 1731
            +VIVEQA+V+RC ATVDFFEKESTIYPPTVNDD MYEHV+KVATDLLGP NFRVVPPMMGAEDFSFY+QVVPA FYYIGVRNETLGS HTGHSPYFMIDEDVLPIGAA HA IAERYL EHG
Sbjct:  341 EVIVEQASVYRCSATVDFFEKESTIYPPTVNDDHMYEHVRKVATDLLGPTNFRVVPPMMGAEDFSFYTQVVPAAFYYIGVRNETLGSIHTGHSPYFMIDEDVLPIGAATHAAIAERYLIEHG 462

HSP 3 Score: 78.9518 bits (193), Expect = 0.000e+0
Identity = 35/45 (77.78%), Postives = 42/45 (93.33%), Query Frame = 2

Query: 1157 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNANFYNLLQRIEEV 1291
            QVVSVT+ +GGNNLDMIPETVV+GGTFRA+SN +FY LL+RI+EV
Sbjct:  298 QVVSVTTMDGGNNLDMIPETVVLGGTFRAYSNTSFYQLLRRIKEV 342

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: B9H7F8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s20110g PE=4 SV=1)

HSP 1 Score: 443.351 bits (1139), Expect = 0.000e+0
Identity = 225/297 (75.76%), Postives = 245/297 (82.49%), Query Frame = 3

Query:  237 GNQYTTFFNAISSSTNPKASLNSG-KNQT--TSSLRSSSFCYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLK----------------GTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            G+   + F+   SS N   SLNS  KNQ+  T    SS  C VW  TCSE VL LAR+P+ V W+K +RRKIHENPELAFEE +TS+LVR ELDRM IEYRYPLA+TGIRAWIGTGGPPFVA+RADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAML+GAAKILK+REHLLK                GTVI++FQPAEEAGNGAKRMIGDGALE VEAIFAVHVSHEHPT IIGSRPGPLLAGCGFFRAVI+G+ G AG+PHHSVDPILAASAAVISLQGIVSRE+NPLDSQV
Sbjct:   53 GDYSYSCFDGTLSSVN---SLNSKPKNQSKPTKGKPSSPSCEVWTKTCSEAVLALARQPETVTWLKSVRRKIHENPELAFEEVKTSELVRDELDRMGIEYRYPLAQTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLMGAAKILKSREHLLKTPEQLKWVFDVPKESVGTVILLFQPAEEAGNGAKRMIGDGALEEVEAIFAVHVSHEHPTAIIGSRPGPLLAGCGFFRAVINGKMGRAGTPHHSVDPILAASAAVISLQGIVSREANPLDSQV 346

HSP 2 Score: 231.491 bits (589), Expect = 0.000e+0
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 1

Query: 1366 QVIVEQANVFRCWATVDFFEKESTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPATFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEHG 1731
            +VIVEQA+VFRC ATVDFFE +ST+YPPTVNDD MYEHV+KVA DLLGP NFRVVPPMMGAEDFSFY+QVVPA FYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAA HATIAERYL EHG
Sbjct:  388 EVIVEQASVFRCSATVDFFENQSTVYPPTVNDDHMYEHVRKVAIDLLGPANFRVVPPMMGAEDFSFYTQVVPAAFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAATHATIAERYLIEHG 509

HSP 3 Score: 75.8702 bits (185), Expect = 0.000e+0
Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 2

Query: 1157 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNANFYNLLQRIEEV 1291
            QVVSVT+ +GGN+LDMIP+TV++GGTFRAFSN +F  LLQRIEEV
Sbjct:  345 QVVSVTTMDGGNDLDMIPDTVILGGTFRAFSNTSFNQLLQRIEEV 389

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: A0A067GYS1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011407mg PE=4 SV=1)

HSP 1 Score: 442.58 bits (1137), Expect = 0.000e+0
Identity = 211/284 (74.30%), Postives = 247/284 (86.97%), Query Frame = 3

Query:  240 NQYTTF-FNAISSSTNP------KASLNSGKNQTTSSLRSSSFCYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            N Y  F  N++ SST        K    S KN++++S +  S C VW   CS+EV+ LAR+P+ V+W+K +RR IH+NPELAF+E+ETS+L+R+ELDRM+I Y+YPLAKTGIRAW+GTGGPPFVA+RADMDALPIQEAVEWE+KSKVAGKMHACGHDAHVAML+GAAKILK+REHLLKGTVI+IFQPAEEAGNGAKRM+ DGALE+VEAIFAVHVSHEHPTG+IGSRPGPLLAGCGFF AVISG+KG A +PH SVDP+LAASAAVISLQG+VSRE+NPLDSQV
Sbjct:   33 NDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQV 316

HSP 2 Score: 222.631 bits (566), Expect = 0.000e+0
Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 1

Query: 1366 QVIVEQANVFRCWATVDFFEKESTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPATFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEHG 1731
            +VIVEQA VFRC ATVDFF+K +T+YPPTVND+ MYEHVKKVA DLLGP N+RVVPPMMGAEDFSFYS+VVPA FYYIG++NETLGS HTGHSPYFMIDEDVLP+GAAVHATIAER+LNE+G
Sbjct:  358 EVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYG 479

HSP 3 Score: 78.1814 bits (191), Expect = 0.000e+0
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 2

Query: 1157 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNANFYNLLQRIEEV 1291
            QVVSVT FNGG++LDMIP+ VVIGGT RAFSN +FY LLQRIEEV
Sbjct:  315 QVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEV 359

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Match: V4V604_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000964mg PE=4 SV=1)

HSP 1 Score: 435.261 bits (1118), Expect = 0.000e+0
Identity = 211/284 (74.30%), Postives = 248/284 (87.32%), Query Frame = 3

Query:  240 NQYTTF-FNAISSSTNP------KASLNSGKNQTTSSLRSSSFCYVWDVTCSEEVLGLARKPDNVEWIKGLRRKIHENPELAFEEYETSKLVRSELDRMDIEYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLVGAAKILKNREHLLKGTVIVIFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGRKGLAGSPHHSVDPILAASAAVISLQGIVSRESNPLDSQV 1070
            N Y  F  N++ SST        K    S KN++++S +S S C VW   CS+EV+ LAR+P+ V+W++ +RR IH+NPELAF+E+ETS+L+R+ELDRM+I Y+YPLAKTGIRAW+GTGGPPFVA+RADMDALPIQEAVEWE+KSKVAGKMHACGHDAHVAML+GAAKILK+REHLLKGTVI+IFQPAEEAGNGAKRM+ DGALE+VEAIFAVHVSHEHPTG+IGSRPGPLLAGCGFF AVISG+KG A +PH SVDP+LAASAAVISLQG+VSRE+NPLDSQV
Sbjct:   33 NDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKSFSSCGVWSRACSKEVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQV 316

HSP 2 Score: 222.246 bits (565), Expect = 0.000e+0
Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 1

Query: 1366 QVIVEQANVFRCWATVDFFEKESTIYPPTVNDDRMYEHVKKVATDLLGPPNFRVVPPMMGAEDFSFYSQVVPATFYYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHATIAERYLNEHG 1731
            +VIVEQA VFRC ATVDFF+K +T+YPPTVND+ MYEHVKKVA DLLGP N+RVVPPMMGAEDFSFYS+VVPA FYYIG++NETLGS HTGHSPYFMIDEDVLP+GAAVHATIAER+LNE+G
Sbjct:  358 EVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYG 479

HSP 3 Score: 78.1814 bits (191), Expect = 0.000e+0
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 2

Query: 1157 QVVSVTSFNGGNNLDMIPETVVIGGTFRAFSNANFYNLLQRIEEV 1291
            QVVSVT FNGG++LDMIP+ VVIGGT RAFSN +FY LLQRIEEV
Sbjct:  315 QVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEV 359

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
YTNL_BACSU	2.786e-45	43.98	Uncharacterized hydrolase YtnL OS=Bacillus subtili...	[more]
YHAA_BACSU	7.421e-44	42.99	Putative amidohydrolase YhaA OS=Bacillus subtilis ...	[more]
Y100_SYNY3	3.532e-38	39.35	Uncharacterized hydrolase sll0100 OS=Synechocystis...	[more]
HIPO_CAMJE	4.421e-36	39.45	Hippurate hydrolase OS=Campylobacter jejuni subsp....	[more]
AMAA_GEOSE	3.808e-35	38.50	N-acyl-L-amino acid amidohydrolase OS=Geobacillus ...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0097513 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2U6L3_GOSRA	0.000e+0	95.70	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2SMX4_GOSRA	0.000e+0	95.74	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061FG60_THECC	0.000e+0	86.41	IAA-leucine resistant-like gene 6 isoform 1 OS=The...	[more]
A0A0D2S7M0_GOSRA	0.000e+0	87.10	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
B9GU29_POPTR	0.000e+0	83.65	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
B9RJ28_RICCO	0.000e+0	80.73	IAA-amino acid hydrolase ILR1, putative OS=Ricinus...	[more]
D5FTG9_POPTO	0.000e+0	79.06	IAA-amino acid hydrolase (Fragment) OS=Populus tom...	[more]
B9H7F8_POPTR	0.000e+0	75.76	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
A0A067GYS1_CITSI	0.000e+0	74.30	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4V604_9ROSI	0.000e+0	74.30	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011650	Peptidase M20, dimerisation domain	GENE3D	3.30.70.360		coord: 273..318 e-value: 1.5E-12 score: 46.7
IPR011650	Peptidase M20, dimerisation domain	SUPERFAMILY	55031	Bacterial exopeptidase dimerisation domain	coord: 268..316
IPR002933	Peptidase M20	PFAM	PF01546	Peptidase_M20	coord: 159..255 e-value: 4.6E-22 score: 78.6
None	No IPR available	GENE3D	3.40.630.10		coord: 99..272 e-value: 5.4E-75 score: 251.6
None	No IPR available	PANTHER	PTHR11014:SF62	IAA-AMINO ACID HYDROLASE ILR1-LIKE 6	coord: 34..318
None	No IPR available	PANTHER	PTHR11014	PEPTIDASE M20 FAMILY MEMBER	coord: 34..318
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..37
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..37
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 38..318
None	No IPR available	SUPERFAMILY	53187	Zn-dependent exopeptidases	coord: 97..289
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR017439	Amidohydrolase	TIGRFAM	TIGR01891	TIGR01891	coord: 104..318 e-value: 2.7E-72 score: 241.9

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0097513 ID=g.barbadense_cottongen_reftransV1_0097513; Name=g.barbadense_cottongen_reftransV1_0097513; organism=Gossypium barbadense; type=contig; length=2246bp
TTTCTCTTAAACCACATGCTTAATTCTCTCTCTCCTTTCTGTCCCTCTTC
TCTTTTTAAAAAAAACTCTGGCTATCCATTCTTTCTCCATTCATTTTCTT
TTCGGTCTCTCCAAACATGTATTCTCTAAAATCATATGTTTTGGTTTTAA
GCTTAATCTTTATTCCCTTTTTGGCTAACAATTTTCTTGTTTTTGTTAAC
TCCATAACTTCTTCGTCTTCTTATTCTTCTTCCTCGGGTAATCAATACAC
CACTTTTTTCAACGCTATATCTTCTTCCACCAATCCCAAGGCTTCCTTAA
ACTCCGGTAAGAACCAAACGACGTCGTCTCTGAGATCATCCAGCTTCTGC
TACGTATGGGATGTGACCTGCTCTGAGGAGGTGTTGGGCCTGGCCCGGAA
GCCCGACAACGTCGAGTGGATTAAAGGGTTGAGAAGGAAGATACATGAGA
ACCCTGAGCTAGCTTTTGAAGAGTACGAAACCAGTAAACTCGTTCGATCC
GAGTTGGACCGTATGGATATTGAATATAGGTACCCTTTAGCCAAAACGGG
TATTCGGGCTTGGATTGGAACCGGTGGCCCGCCCTTTGTTGCCATCCGAG
CTGACATGGATGCCCTTCCTATACAGGAAGCTGTAGAATGGGAGCATAAA
AGCAAAGTTGCCGGAAAAATGCATGCTTGTGGCCATGATGCACATGTTGC
AATGCTTGTTGGTGCTGCCAAAATATTGAAGAATCGTGAACACCTTTTGA
AGGGAACTGTGATAGTGATCTTTCAGCCGGCAGAGGAAGCCGGAAATGGT
GCTAAGCGGATGATCGGAGATGGGGCATTGGAAAACGTAGAGGCCATTTT
TGCAGTCCATGTATCCCACGAACACCCCACGGGTATTATCGGCTCAAGGC
CTGGTCCTCTTCTTGCCGGCTGCGGCTTCTTTCGAGCTGTTATCAGTGGA
AGAAAAGGCCTTGCCGGCAGCCCCCATCACTCCGTCGACCCAATCTTGGC
TGCATCAGCTGCCGTAATTAGTTTACAGGGAATTGTTTCTCGTGAATCAA
ATCCATTAGATTCCCAGGTCTGAGTTTTGTTTTATAAATTTCTCCAACTT
CCAAAACTTGGGGAAATTTTTTTAAACTTGTTTAAATCTTGTAATGCAAA
TGCATGCAGGTCGTCTCGGTCACTTCTTTCAATGGAGGCAATAATCTTGA
CATGATCCCTGAAACGGTGGTCATAGGAGGTACTTTCAGGGCTTTCTCCA
ACGCCAATTTTTACAATCTTCTCCAAAGAATCGAAGAGGTTCGTCGCAGT
TTTCACTTTTAGATTTGGAGTCCTTATTTTCACAATTCTAACATTCTTCG
ACATGGAAACACACACAGGTAATCGTCGAACAGGCCAATGTTTTCCGATG
TTGGGCGACGGTCGATTTCTTTGAAAAAGAATCAACAATCTATCCCCCAA
CAGTGAATGACGACCGTATGTACGAGCACGTAAAGAAAGTGGCCACTGAT
TTGCTAGGACCACCAAATTTCAGGGTGGTCCCTCCAATGATGGGTGCGGA
GGACTTCTCCTTTTACTCCCAGGTAGTTCCGGCAACTTTCTACTACATCG
GCGTAAGAAACGAGACCTTGGGATCGACACACACCGGTCACTCGCCGTAT
TTCATGATCGACGAAGATGTTCTTCCCATTGGTGCTGCGGTTCATGCCAC
CATTGCTGAAAGGTACCTCAACGAGCATGGCTGAAAAGGAAAGAGGCTTT
ATATCTGTGGTTTATTTATCCCCAACTGGGTTGAGCACTGATTATTGAGA
GAATTGGCAATGCATGTGCTCTGGTGATTTTGATCATAGTTAGGGTGGTG
GAAAGGGCAAAGGTTTTCAACTTTTGGCGATGTAAAGAACTGAGCAGAGG
ATGCCATGCTCTGCTCTTTGAACTTGTAACAGTGTTAAATGTTTCAATTA
ATGCTACTTTGCGTTCAACTCTATTTCTGTTCAGAGCATTAAGATGCTTT
TTAACCAGGCAAATATTTTATGATTTATTTAATGCAACCGACTATATTAC
CTCGGTTAAGATGAAATTTGGTCGTGATTGGCTGTAAGGAGATGGGCTCT
GGGCTCGGGGTATCTCAGGTCTTCTTTTCTTTTTTTGGGCTCCTTCCAAT
GTATTTCTTCTCCCTTGTATGAAGCTTATGAATAGAGAGAAAAAAATTAG
ACATTCAAAAAAAGAAAAAGAAAAATTGAGCATTGTTTGAATCATG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR011650	Peptidase_M20_dimer
IPR002933	Peptidase_M20
IPR017439	Amidohydrolase

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Search form

g.barbadense_cottongen_reftransV1_0097513, g.barbadense_cottongen_reftransV1_0097513 (contig) Gossypium barbadense

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