g.barbadense_cottongen_reftransV1_0097431, g.barbadense_cottongen_reftransV1_0097431 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR90_ARATH (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 3.018e-57 Identity = 118/426 (27.70%), Postives = 223/426 (52.35%), Query Frame = -2 Query: 752 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2029 T L++ L K EA + + + + G +P LVTY +V+ L + ++L++K+E ++ D ++FN +I++ + +V +A+ +F++M+ G +P T+++L+ + G+ ++S+LL M++ + PN T+N LI A+ + EA + M+ + PD+ TYN++ + +A+QM M + P+V T ++ G+CK + + M G+ + V + +L++G D + + M GV PD++T+S +++ + G ++K E+FD M K+ I+ D++ ++ + +G +AG+ + L S+ GV+PNVV + T+ISG C+ + A + +KM E G PN TY TLI + + EL++ M + STI LVA+ Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618 HSP 2 Score: 190.274 bits (482), Expect = 8.566e-50 Identity = 112/446 (25.11%), Postives = 211/446 (47.31%), Query Frame = -2 Query: 791 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAW----------------SSAGLM-------------------DKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKG 2023 L+N + + A + + + G++P++VT ++L++ KR ++L+ ++ E G +PD+I F +I+ EA+ + +M + GC+P T+ ++ G G + + LL M + ++ + +N +I + C ++++A N+ M G+ P+VVTY+++ G A Q++ +M K+ PN+ T ++ + KEG EA + M + + P++ +NSLV GF + + M PDV+T++T++ + S GL+ D Q++F MV G+ PD+ +SIL G G+ +A + + M K ++ ++ I+TT+I G C AGK++ ++ + GV PN+ TY T+I G + +A LL+ M+E G Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570 HSP 3 Score: 183.726 bits (465), Expect = 1.568e-47 Identity = 105/430 (24.42%), Postives = 214/430 (49.77%), Query Frame = -2 Query: 707 KPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRII 1996 K +A +F + + P++V + L+SA+ ++K++ +ISL K++ + +N +IN F + A+ + KM K G +P+ T ++L+ GY + + ++ L++ M++ G +P+ T+ LI EA +V RMV G P++VTY + + G+T A ++ +M+ K+ +V I+ CK ++ +AL M+ G++PN+V ++SL+ + + L+ M E + P+++TF+ +++A+ G + ++++DDM+K I+PD+ ++ L G+ +A+ + M P+VV + T+I G+C + ++ ++ +M G+ + TY TLI G A+++ + M G+ + T ++ D G L +A + Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493 HSP 4 Score: 75.8702 bits (185), Expect = 9.348e-13 Identity = 51/213 (23.94%), Postives = 95/213 (44.60%), Query Frame = -2 Query: 674 PNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVD-RGIASNT 1309 P++V FN L+ + + V M+ + + T++ ++N + + + M+K G EP + S L GY +A +L++ M + G +P+ + FTT+I G K + A + ++M + G PNL TY ++ G + A LL ME I A+ + D+ +++A + K ++ +GI N Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.366e-57 Identity = 115/424 (27.12%), Postives = 220/424 (51.89%), Query Frame = -2 Query: 752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023 L++ L + EA + + + +G +P LVTY +V+ L + +SL+ K+E+ ++P +++N +I+A NV +A+ +F +M G +P T+N+L++ N G+ ++S+LL M++ + PN T++ LI A+ + + EA + M+ + PD+ TY+++ + A+ M M + PNV T ++ G+CK + E + M + G+ N V + +L+ GF + + M GV PD++T+S +++ + G ++ +F+ + ++ +EPD++ ++I+ +G +AG+ + L S+ GV+PNVV +TT++SG+C G A ++ +M E G P+ TY TLI + + EL++ M + STI LV + Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614 HSP 2 Score: 209.149 bits (531), Expect = 3.364e-56 Identity = 114/427 (26.70%), Postives = 219/427 (51.29%), Query Frame = -2 Query: 716 KPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEAR 1996 K +A +F + + P++V ++ L+SA+ ++ ++ +ISL +++ G+ + ++ +IN F + A+ + KM K G +P T N+L+ G+ + + ++ L+ M++ G QP+ T+N LI EA +V RMV G PD+VTY + + G+ A ++ +M+ K+ P V I+ C N+ +AL M G++PN+V +NSL++ + + L+ M E + P+V+TFS +++A+ G + + ++++D+M+K I+PD+ +S L G+ EA+ + M PNVV + T+I G+C A +++ ++ +M + G+ N TY TLI G+ +A++ A+ + + M G+ + T ++ D GL N + Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD-----GLCNNGK 481 HSP 3 Score: 198.364 bits (503), Expect = 1.755e-52 Identity = 113/440 (25.68%), Postives = 213/440 (48.41%), Query Frame = -2 Query: 704 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIK 2023 L+N + + A + + + G++P +VT +L++ R +SL+ ++ E G +PDS FN +I+ EA+ + +M GC+P T+ ++ G G + + LL+ M Q G ++P YN +I A CN N+ +A N+ M G+ P+VVTYN++ R G A +++ +M K+ PNV T ++ + KEG + EA + M + + P++ ++SL+ GF + LM P+V+T++T++ + A +D+ E+F +M + G+ + ++ L G+ +A E A+ + M GV P+++ ++ ++ G C GK+ A V+E + + P++ TY +I G +A + +L + KG+ T + + GL EA + + Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ-GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560 HSP 4 Score: 184.111 bits (466), Expect = 9.564e-48 Identity = 105/384 (27.34%), Postives = 196/384 (51.04%), Query Frame = -2 Query: 809 GHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGY---GEAKQPWKAEELLQ 1951 G L TY+ L++ R + +++++K+ + G +PD + N+++N F + +A+ + +M + G +P + TFNTL+ G +A E+ L++ M+ G QP+ TY I++ C + +I+ A +++ +M + P VV YNTI A A + EM N + PNV T ++ C G ++A R + M E + PN+V F++L+ F+ ++ M + + PD+ T+S+++N + +D+ + +F+ M+ P+V ++ L KG+ +A E L M + G+ N V +TT+I G+ A + ++A V+++M GV P++ TY L+ G G+ + E LQ Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493 HSP 5 Score: 139.043 bits (349), Expect = 7.524e-33 Identity = 85/294 (28.91%), Postives = 149/294 (50.68%), Query Frame = -2 Query: 710 NKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTL---MEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRI 1582 N L +++A N+ MV S P +V ++ + A A+ + + +MQN ++ N+ T I++ +C+ ++ AL + +M +LG +P++V NSL+ GF N + +A++L M E G +PD TF+T+++ + + D MV G +PD+ + I+ G + G+ A SLL M + ++P VVI+ T+I C +N A ++ +M G+ PN+ TY +LI + A LL M E+ I+ T + DA+ G L EA ++ Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF---CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348 HSP 6 Score: 127.872 bits (320), Expect = 3.992e-29 Identity = 87/363 (23.97%), Postives = 163/363 (44.90%), Query Frame = -2 Query: 704 VKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIK 1783 + +A+ +F M KS P+ F+ L+ + K + L E M Q+ + N TY+ILI +C + + A V+ +M+ G PD+VT N++ + G+C +++A+ V +M E+G QP+ FN+L+ G N EA+ L++ G +PD++T+ ++N G +D + M + IEP V ++ + +A +L M G++PNVV + ++I C G+ + A+R+ M E + PN+ T+ LI + + + +AE+L M ++ I + T + + + L+EA+ + + Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSL-----------------------------------LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR---HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385 HSP 7 Score: 78.5666 bits (192), Expect = 1.191e-13 Identity = 41/147 (27.89%), Postives = 76/147 (51.70%), Query Frame = -2 Query: 1589 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRA 2029 T L++ + + AQ +F + +G P ++TY+ L+ L + ++ + + ++ + M+PD +N MI ++G V++ +F + G KP T+ T+M G+ G EE+ L M ++G + P+ TYN LIRA Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRA 580
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR36_ARATH (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 5.359e-57 Identity = 117/424 (27.59%), Postives = 222/424 (52.36%), Query Frame = -2 Query: 752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023 L+N L GK EA + + + E G +P VTY +++ + + + + L+ K+EE +K D++ ++ +I+ + G++ A +F +M+ G T+N L+ G+ N G+ ++ +KLL M++ + PN T+++LI ++ + + EA + M+ G+ PD +TY ++ + + +A QM+ M + PN+RT I++ GYCK + + L +M GV + V +N+L++GF ++ N E M V P+++T+ +++ G +K EIF+ + K+ +E D+ ++I+ G A + +A L S+ GV+P V + +I G C G ++ A ++ KM E G P+ TY LI + K+ +L++ ++ G S + STI++V D Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621 HSP 2 Score: 197.978 bits (502), Expect = 2.445e-52 Identity = 124/475 (26.11%), Postives = 239/475 (50.32%), Query Frame = -2 Query: 635 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLV-------ADAWRAIGLLNEARRIIKNVDRGIASNTKDDIPAEGMEKTY 2029 + L+N L +G+ EA + + + E GHKP L+T LV+ L + + LI K+ E G +P+++ + ++N +SG AM++ +KM++ K ++ ++ G G + + L M G + N TYNILI +CN ++ ++ M+ ++P+VVT++ + ++ + G+ AE++ EM + +AP+ T ++ G+CKE ++ +A + V M G PN+ FN L+ G+ N +D+ L L + GV D +T++T++ + G ++ +E+F +MV + P++ + IL G GE +A + + K ++ ++ I+ +I G C A K++ A ++ + GV P + TY +I G + +AE L + MEE G + + T ++ DA +++ L+ E +R +VD D + ++K++ Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY---CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632 HSP 3 Score: 196.823 bits (499), Expect = 5.908e-52 Identity = 116/449 (25.84%), Postives = 226/449 (50.33%), Query Frame = -2 Query: 692 RARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDR 2038 R R+ L++I K +A +F + PT++ ++ L SA+ + K+Y +++L ++E G+ + + MIN F + A K+ K G +P T TF+TL+ G G+ E+ +L++ M++ G+ +P+ T N L+ C EA ++ +MV G P+ VTY + ++G+T A +++ +M+ + + II+ G CK G++ A M+ G+ N++ +N L+ GF + + + L M + + P+V+TFS +++++ G + + +E+ +M+ GI PD ++ L G+ + +A +++ M G PN+ F +I+G+C A +++ ++ KM GV + TY TLI G+ E + A+EL Q M + + T +++ D G +A I + +++ Sbjct: 59 RLRSGLVDI-----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.012e-56 Identity = 114/426 (26.76%), Postives = 218/426 (51.17%), Query Frame = -2 Query: 752 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2029 T L++ L K EA + + + + G +P LVTY +V+ L + +SL+ K+E+ ++ D +++N +I+ + ++ +A+ +F +M G +P T+++L+ N G+ ++S+LL M++ + PN T++ LI A+ + + EA + M+ + PD+ TY+++ + A+ M M + PNV T ++ G+CK + E + M + G+ N V + +L+ GF D + M GV P+++T++ +++ G + K +F+ + ++ +EPD++ ++I+ +G +AG+ + L ++ GV PNV+ + T+ISG+C G A + +KM E G PN TY TLI + EL++ M G + + STI LV + Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616 HSP 2 Score: 202.601 bits (514), Expect = 6.849e-54 Identity = 129/492 (26.22%), Postives = 244/492 (49.59%), Query Frame = -2 Query: 572 RTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRGIASNTKDDIPA-----EGMEKTYKKQSLSASYSNVLQMPGVAMN 2032 R L N L + K +A +F + + P++V + L+SA+ ++ +++ +ISL +++ G+ D ++ IN F + A+ + KM K G +P T ++L+ GY + + ++ L++ M++ G +P+ T+ LI EA +V +MV G PD+VTY T+ + G+ A ++ +M+ K+ +V I+ G CK +M +AL M G++P++ ++SL+ + + L+ M E + P+V+TFS +++A+ G + + ++++D+M+K I+PD+ +S L G+ EA+ + M PNVV ++T+I G+C A ++ ++ +M + G+ N TY TLI G+ +A+ A+ + + M G+ T ++ D G L +A + + + R S + DI EGM K K + + N L + GV+ N Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR---STMEPDIYTYNIMIEGMCKAGKVEDGWELFCN-LSLKGVSPN 537
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PP101_ARATH (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 2.042e-56 Identity = 116/426 (27.23%), Postives = 222/426 (52.11%), Query Frame = -2 Query: 752 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2029 T L++ L K EA + + + + G +P LVTY +V+ L + +L++K+E ++ D ++FN +I++ + +V +A+ +F++M+ G +P T+++L+ + G+ ++S+LL M++ + PN T+N LI A+ + EA + M+ + PD+ TYN++ + +A+QM M + P++ T ++ G+CK + + M G+ + V + +L++G D + + M GV PD++T+S +++ + G ++K E+FD M K+ I+ D++ ++ + +G +AG+ + L S+ GV+PNVV + T+ISG C+ + A + +KM E G P+ TY TLI + + EL++ M + STI LVA+ Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543 HSP 2 Score: 185.652 bits (470), Expect = 1.294e-48 Identity = 110/446 (24.66%), Postives = 210/446 (47.09%), Query Frame = -2 Query: 791 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAW----------------SSAGLM-------------------DKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKG 2023 L+N + + A + + + G++P++VT ++L++ KR ++L+ ++ E G +PD+I F +I+ EA+ + +M + GC+P T+ ++ G G + + LL M + ++ + +N +I + C ++++A N+ M G+ P+VVTY+++ G A Q++ +M K+ PN+ T ++ + KEG EA + M + + P++ +NSL+ GF + + M PD+ T++T++ + S GL+ D Q++F MV G+ PD+ +SIL G G+ +A + + M K ++ ++ I+TT+I G C AGK++ ++ + GV PN+ TY T+I G + +A LL+ M+E G Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495 HSP 3 Score: 184.882 bits (468), Expect = 2.555e-48 Identity = 101/418 (24.16%), Postives = 204/418 (48.80%), Query Frame = -2 Query: 698 PTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNV 1942 P++ + L+SA+ ++K++ +ISL K++ G+ + +N +IN F + A+ + KM K G +P+ T ++L+ GY C+ I +A +V +MV G PD +T+ T+ + A ++ M PN+ T G++V G CK G++ A + +M+ ++ ++V+FN+++ + VD+AL L +E G++P+V+T+S++++ S G ++ DM++ I P++ F+ L +++ G+ EAE L + M K + P++ + ++I+G+C +++ A +++E M P+L TY TLI G+ ++K+ EL + M +G+ + T + G + A+++ K + Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY------------------------------------CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS---LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386 HSP 4 Score: 78.9518 bits (193), Expect = 8.934e-14 Identity = 52/216 (24.07%), Postives = 98/216 (45.37%), Query Frame = -2 Query: 674 PNLVVFNSLVKGFLDVTDTNGVDEALTL---MEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVD-RGIASNT 1309 P++ FN L+ + D ++L M+ G+ ++ T++ ++N + + + M+K G EP + S L GY +A +L++ M + G +P+ + FTT+I G K + A + ++M + G PNL TY ++ G + A LL ME I A+ + D+ +++A + K ++ +GI N Sbjct: 8 PSIFEFNKLLSA---IAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 220
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 8.251e-56 Identity = 109/441 (24.72%), Postives = 226/441 (51.25%), Query Frame = -2 Query: 707 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRII 2029 T L+ GK ++A I L G P ++TY ++S + + +S++ ++ + PD + +N ++ + +SG +K+AM++ +M + C P T+ L++ + KLL+ M +D P+ TYN+L+ C + ++EA ++ M +SG P+V+T+N I R+ TG AE+++ +M +P+V T I++ C++G + A+ + +M + G QPN + +N L+ GF + E L M G PD++T++T++ A G ++ EI + + G P + ++ + G +AG+ G+A LL+ M ++P+ + +++++ G GK++ A + + + +G+ PN T+ +++ G +++Q +A + L M +G ++ ++ + G+ EA ++ Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577 HSP 2 Score: 191.43 bits (485), Expect = 2.446e-50 Identity = 108/392 (27.55%), Postives = 195/392 (49.74%), Query Frame = -2 Query: 677 NGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDR-GIASN 1849 +G PD I +I F G ++A KI + ++ SG P T+N ++ GY G+ + +L+ M +V P+ TYN ++R+ C+ +++A V+ RM+ +PDV+TY + A + A +++ EM++ P+V T ++V G CKEG + EA++F+ M G QPN++ N +++ ++ L M G P V+TF+ ++N GL+ + +I + M + G +P+ +++ L G+ + + A L M G P++V + T+++ C GK+ A + ++ G +P L TY T+I G +A + KA +LL M K + + T + G ++EA + +R GI N Sbjct: 131 HGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518 HSP 3 Score: 188.734 bits (478), Expect = 2.263e-49 Identity = 108/394 (27.41%), Postives = 189/394 (47.97%), Query Frame = -2 Query: 761 PTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQL 1942 P +VTY ++ +L + K + ++ ++ + PD I + +I A V AMK+ +M+ GC P T+N L+ G G+ +E+ K L M G QPN T+NI++R+ C+ +A ++ M+ G P VVT+N + + G RA ++ +M + PN + ++ G+CKE M A+ ++ RM G P++V +N+++ E L + G P +IT++T+++ + AG K ++ D+M ++PD +S L G R G+ EA + + G++PN V F +++ G C + + + A M G PN +Y LI G +A ELL + KG+ + S Q+ Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594 HSP 4 Score: 160.999 bits (406), Expect = 3.995e-40 Identity = 79/307 (25.73%), Postives = 164/307 (53.42%), Query Frame = -2 Query: 1103 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGI 2023 L+N + ++G+ EA N + G +P ++T+ ++ ++ R+ L++ + G P + FN +IN G + A+ I +KM + GC+P + ++N L+ G+ K + + + LE M+ G P+ TYN ++ A C +E+A +++++ + G P ++TYNT+ A+ G+T +A +++ EM+ + P+ T +V G +EG + EA++F + + +G++PN V FNS++ G T+ + L M G KP+ +++ ++ + G+ + E+ +++ G+ Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG-CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585 HSP 5 Score: 145.591 bits (366), Expect = 4.984e-35 Identity = 102/389 (26.22%), Postives = 180/389 (46.27%), Query Frame = -2 Query: 698 KMKKSGCKPTTSTFNTLMKGYGNI-GKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLD-----------------------VTDT---------NGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNV 1756 K++ SG F TL GY N G SS L+D V+ N+ +R +EE + + MV G PD++ T+ R + + G+T +A +++ ++ + P+V T ++++GYCK G + AL + RM V P++V +N++++ D +T T +GV A+ L++E G PDV+T++ ++N G +D+ + +DM +G +P+V +I+ + G +AE LL M + G P+VV F +I+ C G + A + EKM + G PN +Y L+ G+ + K+ +A E L+ M +G + T + A G + +A I+ + Sbjct: 62 KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALED--VESNNH-----LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440 HSP 6 Score: 56.225 bits (134), Expect = 9.680e-7 Identity = 36/133 (27.07%), Postives = 64/133 (48.12%), Query Frame = -2 Query: 662 IRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRGIASNTKDDI 1060 +R GE E L +M G P+++ TT+I G+C GK AA++ E + G P++ TY +I GY +A + A L +++ +S + T + + G L +A ++ DR + + D+ Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL---DRMLQRDCYPDV 239
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 1.058e-55 Identity = 132/486 (27.16%), Postives = 237/486 (48.77%), Query Frame = -2 Query: 581 RTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRGIASNT--KDDIPAEGMEKTYKKQSLSASYSNVLQMPGV 2032 R KL + + K +A +F + + P+++ ++ L+SA+ ++ ++ +ISL +++ G+ + ++ +IN F + A+ + KM K G +P T ++L+ GY + + E+ L++ M G QPN T+N LI EA ++ RMVA G PD+VTY + + G+T A ++ +M+ K+ P V I+ G CK +M +AL M+ G++PN+V ++SL+ + + L+ M E + PDV TFS +++A+ G + + ++++D+MVK I+P + +S L G+ EA+ + M P+VV + T+I G+C ++ V+ +M + G+ N TY LI G +A A+E+ + M G+ T + D G L +A + + + R T +I EGM K K + + N L + GV Sbjct: 49 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGV 532 HSP 2 Score: 204.142 bits (518), Expect = 1.980e-54 Identity = 111/424 (26.18%), Postives = 223/424 (52.59%), Query Frame = -2 Query: 752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023 L++ L K EA + + + +G +P LVTY +V+ L + +L++K+E+ ++P +++N +I+ + ++ +A+ +F++M+ G +P T+++L+ N G+ ++S+LL M++ + P+ T++ LI A+ + + EA + MV + P +VTY+++ + A+QM M + P+V T ++ G+CK + E + M + G+ N V +N L++G D + E M GV P+++T++T+++ G ++K +F+ + ++ +EP ++ ++I+ +G +AG+ + L ++ GV+P+VV + T+ISG+C G A ++++M E G PN Y TLI + EL++ M G + + STI LV + Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614 HSP 3 Score: 188.734 bits (478), Expect = 3.072e-49 Identity = 106/418 (25.36%), Postives = 210/418 (50.24%), Query Frame = -2 Query: 779 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVK---PDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAE 2023 L+N + + A + + + G++P +VT ++L++ KR ++L+ ++ G +P+++ FN +I+ EAM + +M GC+P T+ ++ G G + + LL M Q G ++P YN +I C ++++A N+ M G+ P+VVTY+++ G A +++ +M K+ P+V T ++ + KEG + EA + M + + P++V ++SL+ GF + +DEA + E K PDV+T++T++ + +++ E+F +M + G+ + ++IL +G +AG+ A+ + M GV PN++ + T++ G C GK+ A V+E + + P + TY +I G +A + +L + KG+ + Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF---CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PP103_ARATH (Pentatricopeptide repeat-containing protein At1g64100 OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 7.768e-55 Identity = 119/424 (28.07%), Postives = 227/424 (53.54%), Query Frame = -2 Query: 752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023 L+N L +G+ EA + N + +G +VTY +V+ + ++ KS ++L+SK+EE +KPD ++++A+I+ + G+ +A +F +M + G P T+N ++ G+ + G+ ++ +LL M++ + P+ T+N LI A + + EA + M+ + PD VTYN++ + + A+ M F++ +P+V T I+ YC+ + E ++ + + G+ N +N+L+ GF +V + N + M GV PD IT + ++ + +++ E+F+ + + I+ D A++I+ G + + EA L S+ GV+P+V + +ISG+C ++ A ++ KM + G P+ +TY TLI G +A + K+ EL+ M G S + TI++VAD Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE-REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM-FDLM---ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650 HSP 2 Score: 168.318 bits (425), Expect = 2.681e-42 Identity = 99/423 (23.40%), Postives = 197/423 (46.57%), Query Frame = -2 Query: 758 KLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLV 2026 K++ + + +P A ++ + + ++ L+ + +S K+ + G +PD + FN +++ + EA+ +F M ++G + F+ +++ IG + P T+N LI C + + EA +V++MV G+H DVVTY TI + G+T A ++ +M+ + P+V I+ CK+G+ ++A M E G+ PN+ +N ++ GF + L M E + PDV+TF+ +++A G + + +++ D+M+ I PD ++ + G+ + +A+ + + M P+VV F T+I +C A +++ ++ ++ G+ N TY TLI G+ E A++L Q M G+ + T ++ Sbjct: 111 KVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE----IG-----------------LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508 HSP 3 Score: 140.198 bits (352), Expect = 4.246e-33 Identity = 95/387 (24.55%), Postives = 185/387 (47.80%), Query Frame = -2 Query: 674 NVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNT----------IARAYAQTG---ET--YRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVD-RGIASNT 1786 ++ +A+ F M +S T N ++ + + + + + L M + + N ++NILI+ +C+ + + + ++ G PDVVT+NT I+ A A G ET A + +M + P V T ++ G C EG + EA V +M G+ ++V + ++V G + DT L+ MEE +KPDV+ +S I++ G Q +F +M++ GI P+V ++ + G+ G +A+ LL M + + P+V+ F +IS GK+ A ++ ++M + P+ TY ++I+G+ + + A+ + +M + + I + A R ++E ++++ + RG+ +NT Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR----VDEGMQLLREISRRGLVANT 467
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.372e-54 Identity = 112/424 (26.42%), Postives = 220/424 (51.89%), Query Frame = -2 Query: 752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023 L+N L GK +A + + + E G +P VTY ++ + + + + L+ K+EE +K D++ ++ +I+ + G++ A +F +M+ G K + TL++G+ G+ ++ +KLL M++ + P+ ++ LI + + + EA + M+ G+ PD VTY ++ + + + +A M+ M + PN+RT I++ GYCK + + L +M GV + V +N+L++GF ++ E M V+PD++++ +++ G +K EIF+ + K+ +E D+ ++I+ G A + +A L S+ GV+P+V + +I G C G ++ A ++ KM E G +PN TY LI + K+ +L++ ++ G S + ST+++V D Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605 HSP 2 Score: 192.2 bits (487), Expect = 1.816e-50 Identity = 120/475 (25.26%), Postives = 231/475 (48.63%), Query Frame = -2 Query: 635 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLV-------ADAWRAIGLLNEARRIIKNVDRGIASNTKDDIPAEGMEKTY 2029 + L+N L +G+ EA + + + E GHKPTL+T ALV+ L + + LI ++ E G +P+ + + ++ +SG AM++ +KM++ K ++ ++ G G + + L M G + + Y LIR +C ++ ++ M+ + PDVV ++ + + + G+ AE++ EM ++P+ T ++ G+CKE + +A + M G PN+ FN L+ G+ N +D+ L L + GV D +T++T++ + G ++ +E+F +MV + PD+ ++ IL G GEP +A + + K ++ ++ I+ +I G C A K++ A ++ + GV P++ TY +I G + +A+ L + MEE G S T ++ DA ++ L+ E +R +VD D + ++K++ Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY---CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616 HSP 3 Score: 188.734 bits (478), Expect = 2.570e-49 Identity = 117/447 (26.17%), Postives = 215/447 (48.10%), Query Frame = -2 Query: 698 RARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNV 2038 R R+ +++I K +A +F +T +P L+ ++ L S + R K+Y ++ L ++E G+ + + MIN + A K+ K G +P T TF+TL+ G G+ E+ +L++ M++ G+ +P T N L+ C + +A ++ RMV +G P+ VTY + + ++G+T A +++ +M+ K+ + II+ G CK+G++ A M+ +KGF K D+I ++T++ + AG D ++ DM+K I PDV AFS L +++ G+ EAE L M + G+ P+ V +T++I G+C +++ A + + M G PN+ T+ LI GY +A EL + M +G+ A+ T + + +G L A+ + + + Sbjct: 43 RLRSGIVDI-----KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME--------------IKGF---------------------KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448 HSP 4 Score: 128.642 bits (322), Expect = 1.991e-29 Identity = 75/297 (25.25%), Postives = 146/297 (49.16%), Query Frame = -2 Query: 1151 VRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGL 2041 V A + L++ +++GK +EA+ + + + G P VTYT+L+ + + ++ + G P+ FN +IN + ++ + + +++F+KM G T T+NTL++G+ +GK E + +L + M+ V+P+ +Y IL+ C+ E+A + ++ S M D+ YN I + A + + V P+V+T I++ G CK+G+++EA +M+E G PN +N L++ L D + + ++ G D T +++ S L Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PP100_ARATH (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.546e-54 Identity = 118/426 (27.70%), Postives = 218/426 (51.17%), Query Frame = -2 Query: 752 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2029 T L++ L K EA + + + + G +P LVTY +V+ L + ++L++K+E +K + ++FN +I++ + +V+ A+ +F +M+ G +P T+N+L+ N G+ ++S+LL ML+ + PN T+N LI A+ + + EA + M+ + PD +TYN + + A+QM M + PN++T ++ G+CK + + + M + G+ N V + ++++GF D + M V D++T+S +++ S G +D IF + K+ +E ++ ++ + +G +AG+ GEA L S+ ++P+VV + T+ISG C+ + A ++ KM E G PN TY TLI + EL++ M G + STI LV + Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613 HSP 2 Score: 188.348 bits (477), Expect = 3.884e-49 Identity = 106/413 (25.67%), Postives = 200/413 (48.43%), Query Frame = -2 Query: 791 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKG 2029 + L+N + +A + + + E G+KP T+T L+ L + ++L+ ++ + G +PD + + ++N + G++ A+ + KM+ + K FNT++ E + L M G ++PN TYN LI CN +A ++ M+ ++P+VVT+N + A+ + G+ AE++ EM + P+ T +++ G+C + EA + M PN+ +N+L+ GF E M + G+ + +T++TI+ + AG D Q +F MV + D+ +SIL G G+ A + + K ++ N+ I+ T+I G C AGK+ A ++ C + + P++ TY T+I G + +A++L + M+E G Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565 HSP 3 Score: 182.57 bits (462), Expect = 3.967e-47 Identity = 107/447 (23.94%), Postives = 222/447 (49.66%), Query Frame = -2 Query: 692 RTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDR 2032 R L N L + K +A +F + + P++V + L+SA+ ++ +++ +ISL +++ G+ D ++ IN F + A+ + KM K G +P T ++L+ GY + + ++ L++ M++ G +P+ T+ LI EA +V +MV G PD+VTY T+ + G+ A ++ +M+ ++ NV I+ CK ++ A+ M+ G++PN+V +NSL+ + + L+ M E + P+V+TF+ +++A+ G + + +++ ++M++ I+PD +++L G+ EA+ + M PN+ + T+I+G+C ++ ++ +M + G+ N TY T+I G+ +A A+ + + M + + T ++ + G L+ A I K + + Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496 HSP 4 Score: 75.0998 bits (183), Expect = 1.682e-12 Identity = 53/257 (20.62%), Postives = 116/257 (45.14%), Query Frame = -2 Query: 1346 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEES-------------------SKLLELMLQDGNV------------QPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEAL 2023 L+N + EA+ +F + + P + TY L++ + KR + + L ++ + G+ +++ + +I F ++G+ A +F++M + T++ L+ G + GK + + + ++E M + G V +P+ TYN +I C+K ++EA ++ +M G P+ TYNT+ RA + + + ++I EM+++ + T +VT +G + ++ Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKSF 624
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: F6H2Y7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03850 PE=4 SV=1) HSP 1 Score: 775.007 bits (2000), Expect = 0.000e+0 Identity = 382/630 (60.63%), Postives = 477/630 (75.71%), Query Frame = -2 Query: 374 RSIAMGKHQEGTI-MXXXXXXXXXXXXXXVDEKEQSHPGTGSADSEVSSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRI---IKNVDRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYDSS---------SLFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFIN 2224 S A +HQ+GT + K+ V+A V D K + HP + SAD + +CI C SC+TVR+RTKLMNI+IEKG+PQE Q I +S+ E GHKP+LVTYT L++ALT K + SI S+IS+VEENGM+PDSI FNA+INAFSESGN++EAMK F KMK+SG KPTTSTFNTL+KGYG G+ EES KLLELM QD NV+PN RTYN+L+RAWCNK NI +AWNVV++MVASG+ PD VTYNTIA AYAQ GE +AE +I EMQN+ V PN RTC II+ GYCKEG + EAL+FVYRMK+LG+QPNLVVFNSL+KGF+D D +GV+E LTLMEEFGVKPDVITFSTIMNAWS+AG MDKC+EIFDDMVKA I+PD H +SILAKGY+RAGEP +AE +LN+M K G PNVVIFTT+I+GWC+AG+M +A +++EKMCE G+ PNL T+ETLIWGYGEA+QPWK+EE+LQIMEE + E++T+ LVA+AWRA GL EA RI +KN + ++ +D IP +EK Y+K SAS+ N LQ+P + +++Q GS S+ RS+MVL D S SL + FG + IICQKQ + + M+ Q +SC LVF+N Sbjct: 10 HSDAPTEHQDGTTDVKKEEVEALQTEVKRRDGKHELHPVSQSADPQSQVRCISCLSKTSCRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNEEMTHETDREDKIPVGSLEKHYQKP--SASFPNQLQLPNLVISDQKGSGSATKRSRMVLGDTDFSLESSWTATRSLSLTHSCTFGARSPIICQKQ--SHGQLCMYSQLAHSCPLVFLN 635
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: A5BLD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033966 PE=4 SV=1) HSP 1 Score: 770.77 bits (1989), Expect = 0.000e+0 Identity = 380/630 (60.32%), Postives = 475/630 (75.40%), Query Frame = -2 Query: 374 RSIAMGKHQEGTI-MXXXXXXXXXXXXXXVDEKEQSHPGTGSADSEVSSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRI---IKNVDRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYDSS---------SLFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFIN 2224 S A +HQ+GT K+ V+A V D K + HP + SAD + +CI C SC+TVR+RTKLMNI+IEKG+PQE Q I +S+ E GHKP+LVTYT L++ALT K + SI S+IS+VEENGM+PDSI FNA+INAFSESGN++EAMK F KMK+SG KPTTSTFNTL+KGYG G+ EES KLL+LM QD NV+PN RTYN+L+RAWCNK NI +AWNVV++MVASG+ PD VTYNTIA AYAQ GE +AE +I EMQN+ V PN RTC II+ GYCKEG + EAL+FVYRMK+LG+QPNLVVFNSL+KGF+D D +GV+E LTLMEEFGVKPDVITFSTIMNAWS+AG MDKC+EIFDDMVKA I+PD H +SILAKGY+RAGEP +AE +LN+M K G PNVV+FTT+I+GWC+AG+M +A +++EKMCE G+ PNL T+ETLIWGYGEA+QPWK+EE+LQIMEE + E++T+ LVA+AWRA GL EA RI +KN + ++ +D IP EK Y+K SAS+ N LQ+P + +++Q GS S+ RS+MVL D S SL + FG + IICQKQ + + M+ Q +SC LVF+N Sbjct: 10 HSDAPTEHQDGTTDAKKEEVEALQTEVKRRDGKHELHPVSQSADPQSQVRCISCLSKTSCRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNEETTHETDREDKIPVGSSEKHYQKP--SASFPNQLQLPNLVISDQKGSGSATKRSRMVLGDTDFSLESSWTATRSLSLTHSCTFGARSPIICQKQ--SHGQLCMYSQLAHSCPLVFLN 635
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: A0A067KR04_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07785 PE=4 SV=1) HSP 1 Score: 767.689 bits (1981), Expect = 0.000e+0 Identity = 368/581 (63.34%), Postives = 452/581 (77.80%), Query Frame = -2 Query: 374 CIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRGIASNTKD----DIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYDSS---------SLFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFIN 2077 C+ C C+TVR+RTKLMNILIEKGKPQEA+ IF+SL E GHKP+L+TYT L++ALT KR+ SI S+IS+VEENGMKPDSI FNA+INAFSESGN++EAM F KMK++G KPTTST+NTL+KGYG GK EES+KLL+LM ++G+V+PN RTYN+L+RAWCNK NI EAWNVVH+MVAS M PDVVTYNTIA AY Q GET AE +I EMQN + PN RTCGII++GYCKEG + EALRFVYRMKE GV PNLVV NSL+KGF++ D +GVDE L LMEEF VKPDVITFSTIMNAWS+AG MDKC+EIFDDMVKAGIEPD HA+SILAKGY+RA EP +AE LL +M + G PNVVIFTTVISGWC++GKM +A RV++ MCE G++PNL T+ETL+WG+ EAKQPWKAEE+LQIM E + ERST+ LVA+AWRAIGL EA RI+ + R ++ KD D+P E +EK Y+KQS + SYSN+L +P N+Q GSS++ + +MVL++ + S S+ +Q FG + IIC KQ + ++ M+GQF SC VF+N Sbjct: 9 CMFCMTKEGCRTVRSRTKLMNILIEKGKPQEAESIFDSLIEGGHKPSLITYTTLLAALTMQKRFNSIHSIISQVEENGMKPDSIFFNAVINAFSESGNMEEAMDTFWKMKENGMKPTTSTYNTLIKGYGISGKPEESAKLLDLMSREGDVKPNLRTYNVLVRAWCNKKNISEAWNVVHKMVASRMQPDVVTYNTIATAYTQKGETNLAEGIISEMQNKGMQPNERTCGIIISGYCKEGRIKEALRFVYRMKEFGVYPNLVVLNSLIKGFIETMDRDGVDEVLKLMEEFNVKPDVITFSTIMNAWSTAGFMDKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIRSGFHPNVVIFTTVISGWCSSGKMEYAIRVFDMMCEYGISPNLKTFETLMWGFSEAKQPWKAEEILQIMREFKVEPERSTVLLVAEAWRAIGLTKEANRILGTIKRKEMTHRKDRAEEDMPVESLEKLYQKQSTNVSYSNLLHVPSTVTNDQKGSSAALRKGRMVLREAEFSMEYSWLAAKSMCFSQTCKFGSRLPIICHKQ--SQGQHGMYGQFAQSCTAVFLN 587
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: M1C967_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024327 PE=4 SV=1) HSP 1 Score: 759.214 bits (1959), Expect = 0.000e+0 Identity = 370/586 (63.14%), Postives = 453/586 (77.30%), Query Frame = -2 Query: 374 VSSKCIVCSGN-NSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNV---DRGIASNTKDDIPAE-GMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYDS---------SSLFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFIN 2089 +SS+C C G+ +SCQ VR+RTKLMNILIE+ KPQE IF LTE+GH+PTLVTYT +++A T KR+KSI L+SK+E++G+KPDSI FNAMINAFSESGN+KEAMK+F KM+ CKPTTSTFNTL+KG+G IGK EES KLLE+M NV+PNDRTYNIL+RAWCNK I EAWNVVHRMV++G+ PDVVTYNTIA AYA+ E RAE MIF+MQN+KVAPN RTCGIIV GYCKEGNMTEALRFVYRMK+LGV PNLV+FNSL+KGFLD+TDT+GVDE LTLMEEFGVKPDV+TFSTIMNAWSSAGLMDKCQEIFDDM+KA IEPD HAFSILAKGY+RAGEP +AE+LL M GV PNVV+FTT+ISGWC+AG+M +A RV+E+MC+ V+PNL T+ETLIWGYGEAKQPWKAEE LQ+M++ G++ ++T++LV+DAWRAIG LNEA++I +V D + +D P + E+ Y SLS+ ++ +NGSS RSQ+VL +Y S S+ F V+ +I KQ + ++G FVNSC++V +N Sbjct: 42 ISSRCTTCWGSMSSCQIVRSRTKLMNILIERKKPQEVHSIFQGLTEDGHRPTLVTYTTVLAAFTLQKRFKSIPLLLSKLEQDGLKPDSIFFNAMINAFSESGNLKEAMKVFHKMRDKQCKPTTSTFNTLIKGFGIIGKPEESLKLLEIMSLQENVKPNDRTYNILVRAWCNKSKIAEAWNVVHRMVSAGVKPDVVTYNTIATAYARNKEPGRAEAMIFQMQNHKVAPNHRTCGIIVDGYCKEGNMTEALRFVYRMKDLGVLPNLVIFNSLIKGFLDITDTSGVDETLTLMEEFGVKPDVVTFSTIMNAWSSAGLMDKCQEIFDDMIKASIEPDSHAFSILAKGYVRAGEPEKAEALLKVMASSGVHPNVVMFTTIISGWCSAGQMEYAMRVFERMCKRDVSPNLKTFETLIWGYGEAKQPWKAEEFLQVMDKMGVTHTKNTLRLVSDAWRAIGFLNEAKKISGDVEYDDSEFLNALEDKQPGDNNFERVYPNDSLSSLKQ---------VSNKNGSSPVNKRSQIVLSRYSSFAGSINVATKSIMLPHTCGFKVKSLMIFDKQCQV--QIGIYG-FVNSCRMVALN 615
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: V7AQD2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G165600g PE=4 SV=1) HSP 1 Score: 756.903 bits (1953), Expect = 0.000e+0 Identity = 366/583 (62.78%), Postives = 459/583 (78.73%), Query Frame = -2 Query: 377 SKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVY-RMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKN-------VDRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYD-----SSSLFPAQAS-VFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFI 2083 S C++C G NSCQTV +RTKLMN LI KGKP EAQ +FN+LTEEGHKPTL+TYT LV+ALTR KR KSI ++++KV +NGMKPDSIL NAMINAFS+SG V EAMKIF+KMK+ GCKPTTST+NTL+KG+G G+ E+ KL E+M QD NV+PNDRTYNILI+AWC K +EEAWNV+H+MVASG+ PDVVTYNT+ARAYAQ GET +AE++I +MQ NKV PN RTCGII++GYCKEGNMTEALRF+Y +MKELGV PN VVFNSL+KG+LD+ DT+GVDEAL LMEEFG+KPDV+TFSTIMNAWSSAGLMD C+EIF++MVKA IEPD+HA+SILAKGY RAG+ +AE+LL SM K+GVQPNVVI TT+ISGWC GKM+ A R+YEKM ++G+ PNL TYETLIWGYGEAK PWKAEELL MEE+G++ E ST+QLVADAWR+IGLL EA RI+ + +D+ S D+I Y +Q SAS+SN+LQ+P V + +++ RSQ V+K D ++S+F + + +GVQ + ++Q+ + ++ F++ C++V I Sbjct: 42 SHCVICRGGNSCQTVLSRTKLMNTLIGKGKPHEAQTVFNNLTEEGHKPTLITYTTLVAALTRQKRLKSIPAVLAKVADNGMKPDSILINAMINAFSDSGKVDEAMKIFKKMKEYGCKPTTSTYNTLIKGFGIAGRPYEAMKLSEIMGQDQNVKPNDRTYNILIQAWCTKNKLEEAWNVMHKMVASGIQPDVVTYNTMARAYAQIGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYIKMKELGVHPNPVVFNSLIKGYLDIKDTDGVDEALALMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNNMVKADIEPDIHAYSILAKGYARAGQSQKAEALLTSMTKYGVQPNVVILTTIISGWCAEGKMDRAIRLYEKMHDVGIPPNLKTYETLIWGYGEAKLPWKAEELLTTMEERGVAPETSTVQLVADAWRSIGLLKEANRILNDSEEEESELDKKFDS---DNI--------YTRQKFSASHSNMLQIPDVVVPHPERTTNGNIRSQRVVKVSDNMRHITTSMFLVRTTNSYGVQAHSVSKQQI----QNQVVRPFLDYCRVVSI 609 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097431 ID=g.barbadense_cottongen_reftransV1_0097431; Name=g.barbadense_cottongen_reftransV1_0097431; organism=Gossypium barbadense; type=contig; length=2627bpback to top |