g.barbadense_cottongen_reftransV1_0097431, g.barbadense_cottongen_reftransV1_0097431 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0097431
Unique Name	g.barbadense_cottongen_reftransV1_0097431
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2627

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR90_ARATH (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 3.018e-57
Identity = 118/426 (27.70%), Postives = 223/426 (52.35%), Query Frame = -2

Query:  752 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2029
            T L++ L    K  EA  + + + + G +P LVTY  +V+ L +       ++L++K+E   ++ D ++FN +I++  +  +V +A+ +F++M+  G +P   T+++L+    + G+  ++S+LL  M++   + PN  T+N LI A+  +    EA  +   M+   + PD+ TYN++   +       +A+QM   M +    P+V T   ++ G+CK   + +       M   G+  + V + +L++G     D +   +    M   GV PD++T+S +++   + G ++K  E+FD M K+ I+ D++ ++ + +G  +AG+  +   L  S+   GV+PNVV + T+ISG C+   +  A  + +KM E G  PN  TY TLI  +        + EL++ M       + STI LVA+
Sbjct:  194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618

HSP 2 Score: 190.274 bits (482), Expect = 8.566e-50
Identity = 112/446 (25.11%), Postives = 211/446 (47.31%), Query Frame = -2

Query:  791 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAW----------------SSAGLM-------------------DKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKG 2023
            L+N    + +   A  +   + + G++P++VT ++L++     KR    ++L+ ++ E G +PD+I F  +I+         EA+ +  +M + GC+P   T+  ++ G    G  + +  LL  M +   ++ +   +N +I + C   ++++A N+   M   G+ P+VVTY+++       G    A Q++ +M   K+ PN+ T   ++  + KEG   EA +    M +  + P++  +NSLV GF      +   +    M      PDV+T++T++  +                S  GL+                   D  Q++F  MV  G+ PD+  +SIL  G    G+  +A  + + M K  ++ ++ I+TT+I G C AGK++    ++  +   GV PN+ TY T+I G    +   +A  LL+ M+E G
Sbjct:  126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570

HSP 3 Score: 183.726 bits (465), Expect = 1.568e-47
Identity = 105/430 (24.42%), Postives = 214/430 (49.77%), Query Frame = -2

Query:  707 KPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRII 1996
            K  +A  +F  + +    P++V +  L+SA+ ++K++  +ISL  K++   +      +N +IN F     +  A+ +  KM K G +P+  T ++L+ GY +  +  ++  L++ M++ G  +P+  T+  LI          EA  +V RMV  G  P++VTY  +     + G+T  A  ++ +M+  K+  +V     I+   CK  ++ +AL     M+  G++PN+V ++SL+         +   + L+ M E  + P+++TF+ +++A+   G   + ++++DDM+K  I+PD+  ++ L  G+       +A+ +   M      P+VV + T+I G+C + ++     ++ +M   G+  +  TY TLI G         A+++ + M   G+  +  T  ++ D     G L +A  + 
Sbjct:   65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493

HSP 4 Score: 75.8702 bits (185), Expect = 9.348e-13
Identity = 51/213 (23.94%), Postives = 95/213 (44.60%), Query Frame = -2

Query:  674 PNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVD-RGIASNT 1309
            P++V FN L+     +   + V      M+   +   + T++ ++N +     +     +   M+K G EP +   S L  GY       +A +L++ M + G +P+ + FTT+I G     K + A  + ++M + G  PNL TY  ++ G  +      A  LL  ME   I A+      + D+      +++A  + K ++ +GI  N 
Sbjct:   83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.366e-57
Identity = 115/424 (27.12%), Postives = 220/424 (51.89%), Query Frame = -2

Query:  752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023
            L++ L    +  EA  + + +  +G +P LVTY  +V+ L +       +SL+ K+E+  ++P  +++N +I+A     NV +A+ +F +M   G +P   T+N+L++   N G+  ++S+LL  M++   + PN  T++ LI A+  +  + EA  +   M+   + PD+ TY+++   +        A+ M   M +    PNV T   ++ G+CK   + E +     M + G+  N V + +L+ GF    + +        M   GV PD++T+S +++   + G ++    +F+ + ++ +EPD++ ++I+ +G  +AG+  +   L  S+   GV+PNVV +TT++SG+C  G    A  ++ +M E G  P+  TY TLI  +        + EL++ M       + STI LV +
Sbjct:  192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614

HSP 2 Score: 209.149 bits (531), Expect = 3.364e-56
Identity = 114/427 (26.70%), Postives = 219/427 (51.29%), Query Frame = -2

Query:  716 KPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEAR 1996
            K  +A  +F  + +    P++V ++ L+SA+ ++ ++  +ISL  +++  G+  +   ++ +IN F     +  A+ +  KM K G +P   T N+L+ G+ +  +  ++  L+  M++ G  QP+  T+N LI          EA  +V RMV  G  PD+VTY  +     + G+   A  ++ +M+  K+ P V     I+   C   N+ +AL     M   G++PN+V +NSL++   +    +     L+ M E  + P+V+TFS +++A+   G + + ++++D+M+K  I+PD+  +S L  G+       EA+ +   M      PNVV + T+I G+C A +++    ++ +M + G+  N  TY TLI G+ +A++   A+ + + M   G+  +  T  ++ D     GL N  +
Sbjct:   61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD-----GLCNNGK 481

HSP 3 Score: 198.364 bits (503), Expect = 1.755e-52
Identity = 113/440 (25.68%), Postives = 213/440 (48.41%), Query Frame = -2

Query:  704 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIK 2023
            L+N    + +   A  +   + + G++P +VT  +L++      R    +SL+ ++ E G +PDS  FN +I+         EA+ +  +M   GC+P   T+  ++ G    G  + +  LL+ M Q G ++P    YN +I A CN  N+ +A N+   M   G+ P+VVTYN++ R     G    A +++ +M   K+ PNV T   ++  + KEG + EA +    M +  + P++  ++SL+ GF      +       LM      P+V+T++T++  +  A  +D+  E+F +M + G+  +   ++ L  G+ +A E   A+ +   M   GV P+++ ++ ++ G C  GK+  A  V+E +    + P++ TY  +I G  +A +     +L   +  KG+     T   +   +   GL  EA  + +
Sbjct:  122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ-GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560

HSP 4 Score: 184.111 bits (466), Expect = 9.564e-48
Identity = 105/384 (27.34%), Postives = 196/384 (51.04%), Query Frame = -2

Query:  809 GHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGY---GEAKQPWKAEELLQ 1951
            G    L TY+ L++   R  +    +++++K+ + G +PD +  N+++N F     + +A+ +  +M + G +P + TFNTL+ G     +A E+  L++ M+  G  QP+  TY I++   C + +I+ A +++ +M    + P VV YNTI  A         A  +  EM N  + PNV T   ++   C  G  ++A R +  M E  + PN+V F++L+  F+        ++    M +  + PD+ T+S+++N +     +D+ + +F+ M+     P+V  ++ L KG+ +A    E   L   M + G+  N V +TT+I G+  A + ++A  V+++M   GV P++ TY  L+ G    G+ +      E LQ
Sbjct:  111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493

HSP 5 Score: 139.043 bits (349), Expect = 7.524e-33
Identity = 85/294 (28.91%), Postives = 149/294 (50.68%), Query Frame = -2

Query:  710 NKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTL---MEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRI 1582
            N L +++A N+   MV S   P +V ++ +  A A+  +      +  +MQN  ++ N+ T  I++  +C+   ++ AL  + +M +LG +P++V  NSL+ GF      N + +A++L   M E G +PD  TF+T+++         +   + D MV  G +PD+  + I+  G  + G+   A SLL  M +  ++P VVI+ T+I   C    +N A  ++ +M   G+ PN+ TY +LI       +   A  LL  M E+ I+    T   + DA+   G L EA ++
Sbjct:   58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF---CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348

HSP 6 Score: 127.872 bits (320), Expect = 3.992e-29
Identity = 87/363 (23.97%), Postives = 163/363 (44.90%), Query Frame = -2

Query:  704 VKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIK 1783
            + +A+ +F  M KS   P+   F+ L+     + K +    L E M Q+  +  N  TY+ILI  +C +  +  A  V+ +M+  G  PD+VT N++                                   + G+C    +++A+  V +M E+G QP+   FN+L+ G       N   EA+ L++     G +PD++T+  ++N     G +D    +   M +  IEP V  ++ +           +A +L   M   G++PNVV + ++I   C  G+ + A+R+   M E  + PN+ T+  LI  + +  +  +AE+L   M ++ I  +  T   + + +     L+EA+ + +
Sbjct:   62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSL-----------------------------------LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR---HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385

HSP 7 Score: 78.5666 bits (192), Expect = 1.191e-13
Identity = 41/147 (27.89%), Postives = 76/147 (51.70%), Query Frame = -2

Query: 1589 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRA 2029
            T L++   +  +   AQ +F  +  +G  P ++TY+ L+  L    + ++ + +   ++ + M+PD   +N MI    ++G V++   +F  +   G KP   T+ T+M G+   G  EE+  L   M ++G + P+  TYN LIRA
Sbjct:  435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRA 580

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR36_ARATH (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 5.359e-57
Identity = 117/424 (27.59%), Postives = 222/424 (52.36%), Query Frame = -2

Query:  752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023
            L+N L   GK  EA  + + + E G +P  VTY  +++ + +  +    + L+ K+EE  +K D++ ++ +I+   + G++  A  +F +M+  G      T+N L+ G+ N G+ ++ +KLL  M++   + PN  T+++LI ++  +  + EA  +   M+  G+ PD +TY ++   + +     +A QM+  M +    PN+RT  I++ GYCK   + + L    +M   GV  + V +N+L++GF ++   N   E    M    V P+++T+  +++     G  +K  EIF+ + K+ +E D+  ++I+  G   A +  +A  L  S+   GV+P V  +  +I G C  G ++ A  ++ KM E G  P+  TY  LI  +       K+ +L++ ++  G S + STI++V D
Sbjct:  199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621

HSP 2 Score: 197.978 bits (502), Expect = 2.445e-52
Identity = 124/475 (26.11%), Postives = 239/475 (50.32%), Query Frame = -2

Query:  635 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLV-------ADAWRAIGLLNEARRIIKNVDRGIASNTKDDIPAEGMEKTY 2029
            + L+N L  +G+  EA  + + + E GHKP L+T   LV+ L    +    + LI K+ E G +P+++ +  ++N   +SG    AM++ +KM++   K     ++ ++ G    G  + +  L   M   G +  N  TYNILI  +CN    ++   ++  M+   ++P+VVT++ +  ++ + G+   AE++  EM +  +AP+  T   ++ G+CKE ++ +A + V  M   G  PN+  FN L+ G+      N +D+ L L  +    GV  D +T++T++  +   G ++  +E+F +MV   + P++  + IL  G    GE  +A  +   + K  ++ ++ I+  +I G C A K++ A  ++  +   GV P + TY  +I G  +     +AE L + MEE G + +  T  ++        DA +++ L+ E +R   +VD        D +    ++K++
Sbjct:  162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY---CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632

HSP 3 Score: 196.823 bits (499), Expect = 5.908e-52
Identity = 116/449 (25.84%), Postives = 226/449 (50.33%), Query Frame = -2

Query:  692 RARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDR 2038
            R R+ L++I     K  +A  +F  +      PT++ ++ L SA+ + K+Y  +++L  ++E  G+  +    + MIN F     +  A     K+ K G +P T TF+TL+ G    G+  E+ +L++ M++ G+ +P+  T N L+   C      EA  ++ +MV  G  P+ VTY  +     ++G+T  A +++ +M+   +  +     II+ G CK G++  A      M+  G+  N++ +N L+ GF +    +   + L  M +  + P+V+TFS +++++   G + + +E+  +M+  GI PD   ++ L  G+ +     +A  +++ M   G  PN+  F  +I+G+C A +++    ++ KM   GV  +  TY TLI G+ E  +   A+EL Q M  + +     T +++ D     G   +A  I + +++
Sbjct:   59 RLRSGLVDI-----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.012e-56
Identity = 114/426 (26.76%), Postives = 218/426 (51.17%), Query Frame = -2

Query:  752 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2029
            T L++ L    K  EA  + + + + G +P LVTY  +V+ L +       +SL+ K+E+  ++ D +++N +I+   +  ++ +A+ +F +M   G +P   T+++L+    N G+  ++S+LL  M++   + PN  T++ LI A+  +  + EA  +   M+   + PD+ TY+++   +        A+ M   M +    PNV T   ++ G+CK   + E +     M + G+  N V + +L+ GF    D +        M   GV P+++T++ +++     G + K   +F+ + ++ +EPD++ ++I+ +G  +AG+  +   L  ++   GV PNV+ + T+ISG+C  G    A  + +KM E G  PN  TY TLI           + EL++ M   G + + STI LV +
Sbjct:  192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616

HSP 2 Score: 202.601 bits (514), Expect = 6.849e-54
Identity = 129/492 (26.22%), Postives = 244/492 (49.59%), Query Frame = -2

Query:  572 RTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRGIASNTKDDIPA-----EGMEKTYKKQSLSASYSNVLQMPGVAMN 2032
            R  L N L +  K  +A  +F  + +    P++V +  L+SA+ ++ +++ +ISL  +++  G+  D   ++  IN F     +  A+ +  KM K G +P   T ++L+ GY +  +  ++  L++ M++ G  +P+  T+  LI          EA  +V +MV  G  PD+VTY T+     + G+   A  ++ +M+  K+  +V     I+ G CK  +M +AL     M   G++P++  ++SL+    +    +     L+ M E  + P+V+TFS +++A+   G + + ++++D+M+K  I+PD+  +S L  G+       EA+ +   M      PNVV ++T+I G+C A ++     ++ +M + G+  N  TY TLI G+ +A+    A+ + + M   G+     T  ++ D     G L +A  + + + R   S  + DI       EGM K  K +     + N L + GV+ N
Sbjct:   51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR---STMEPDIYTYNIMIEGMCKAGKVEDGWELFCN-LSLKGVSPN 537

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PP101_ARATH (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.042e-56
Identity = 116/426 (27.23%), Postives = 222/426 (52.11%), Query Frame = -2

Query:  752 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2029
            T L++ L    K  EA  + + + + G +P LVTY  +V+ L +        +L++K+E   ++ D ++FN +I++  +  +V +A+ +F++M+  G +P   T+++L+    + G+  ++S+LL  M++   + PN  T+N LI A+  +    EA  +   M+   + PD+ TYN++   +       +A+QM   M +    P++ T   ++ G+CK   + +       M   G+  + V + +L++G     D +   +    M   GV PD++T+S +++   + G ++K  E+FD M K+ I+ D++ ++ + +G  +AG+  +   L  S+   GV+PNVV + T+ISG C+   +  A  + +KM E G  P+  TY TLI  +        + EL++ M       + STI LVA+
Sbjct:  119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543

HSP 2 Score: 185.652 bits (470), Expect = 1.294e-48
Identity = 110/446 (24.66%), Postives = 210/446 (47.09%), Query Frame = -2

Query:  791 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAW----------------SSAGLM-------------------DKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKG 2023
            L+N    + +   A  +   + + G++P++VT ++L++     KR    ++L+ ++ E G +PD+I F  +I+         EA+ +  +M + GC+P   T+  ++ G    G  + +  LL  M +   ++ +   +N +I + C   ++++A N+   M   G+ P+VVTY+++       G    A Q++ +M   K+ PN+ T   ++  + KEG   EA +    M +  + P++  +NSL+ GF      +   +    M      PD+ T++T++  +                S  GL+                   D  Q++F  MV  G+ PD+  +SIL  G    G+  +A  + + M K  ++ ++ I+TT+I G C AGK++    ++  +   GV PN+ TY T+I G    +   +A  LL+ M+E G
Sbjct:   51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495

HSP 3 Score: 184.882 bits (468), Expect = 2.555e-48
Identity = 101/418 (24.16%), Postives = 204/418 (48.80%), Query Frame = -2

Query:  698 PTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNV 1942
            P++  +  L+SA+ ++K++  +ISL  K++  G+  +   +N +IN F     +  A+ +  KM K G +P+  T ++L+ GY                                    C+   I +A  +V +MV  G  PD +T+ T+        +   A  ++  M      PN+ T G++V G CK G++  A   + +M+   ++ ++V+FN+++     +     VD+AL L +E    G++P+V+T+S++++   S G      ++  DM++  I P++  F+ L   +++ G+  EAE L + M K  + P++  + ++I+G+C   +++ A +++E M      P+L TY TLI G+ ++K+     EL + M  +G+  +  T   +       G  + A+++ K +
Sbjct:    8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY------------------------------------CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS---LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386

HSP 4 Score: 78.9518 bits (193), Expect = 8.934e-14
Identity = 52/216 (24.07%), Postives = 98/216 (45.37%), Query Frame = -2

Query:  674 PNLVVFNSLVKGFLDVTDTNGVDEALTL---MEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVD-RGIASNT 1309
            P++  FN L+     +      D  ++L   M+  G+  ++ T++ ++N +     +     +   M+K G EP +   S L  GY       +A +L++ M + G +P+ + FTT+I G     K + A  + ++M + G  PNL TY  ++ G  +      A  LL  ME   I A+      + D+      +++A  + K ++ +GI  N 
Sbjct:    8 PSIFEFNKLLSA---IAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 220

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.251e-56
Identity = 109/441 (24.72%), Postives = 226/441 (51.25%), Query Frame = -2

Query:  707 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRII 2029
            T L+      GK ++A  I   L   G  P ++TY  ++S   +     + +S++ ++    + PD + +N ++ +  +SG +K+AM++  +M +  C P   T+  L++          + KLL+ M +D    P+  TYN+L+   C +  ++EA   ++ M +SG  P+V+T+N I R+   TG    AE+++ +M     +P+V T  I++   C++G +  A+  + +M + G QPN + +N L+ GF      +   E L  M   G  PD++T++T++ A    G ++   EI + +   G  P +  ++ +  G  +AG+ G+A  LL+ M    ++P+ + +++++ G    GK++ A + + +   +G+ PN  T+ +++ G  +++Q  +A + L  M  +G     ++  ++ +     G+  EA  ++
Sbjct:  141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577

HSP 2 Score: 191.43 bits (485), Expect = 2.446e-50
Identity = 108/392 (27.55%), Postives = 195/392 (49.74%), Query Frame = -2

Query:  677 NGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDR-GIASN 1849
            +G  PD I    +I  F   G  ++A KI + ++ SG  P   T+N ++ GY   G+   +  +L+ M    +V P+  TYN ++R+ C+   +++A  V+ RM+    +PDV+TY  +  A  +      A +++ EM++    P+V T  ++V G CKEG + EA++F+  M   G QPN++  N +++           ++ L  M   G  P V+TF+ ++N     GL+ +  +I + M + G +P+  +++ L  G+ +  +   A   L  M   G  P++V + T+++  C  GK+  A  +  ++   G +P L TY T+I G  +A +  KA +LL  M  K +  +  T   +       G ++EA +     +R GI  N
Sbjct:  131 HGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518

HSP 3 Score: 188.734 bits (478), Expect = 2.263e-49
Identity = 108/394 (27.41%), Postives = 189/394 (47.97%), Query Frame = -2

Query:  761 PTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQL 1942
            P +VTY  ++ +L    + K  + ++ ++ +    PD I +  +I A      V  AMK+  +M+  GC P   T+N L+ G    G+ +E+ K L  M   G  QPN  T+NI++R+ C+     +A  ++  M+  G  P VVT+N +     + G   RA  ++ +M  +   PN  +   ++ G+CKE  M  A+ ++ RM   G  P++V +N+++             E L  +   G  P +IT++T+++  + AG   K  ++ D+M    ++PD   +S L  G  R G+  EA    +   + G++PN V F +++ G C + + + A      M   G  PN  +Y  LI G        +A ELL  +  KG+  + S  Q+
Sbjct:  202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594

HSP 4 Score: 160.999 bits (406), Expect = 3.995e-40
Identity = 79/307 (25.73%), Postives = 164/307 (53.42%), Query Frame = -2

Query: 1103 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGI 2023
            L+N + ++G+  EA    N +   G +P ++T+  ++ ++    R+     L++ +   G  P  + FN +IN     G +  A+ I +KM + GC+P + ++N L+ G+    K + + + LE M+  G   P+  TYN ++ A C    +E+A  +++++ + G  P ++TYNT+    A+ G+T +A +++ EM+   + P+  T   +V G  +EG + EA++F +  + +G++PN V FNS++ G      T+   + L  M   G KP+  +++ ++   +  G+  +  E+ +++   G+
Sbjct:  280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG-CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585

HSP 5 Score: 145.591 bits (366), Expect = 4.984e-35
Identity = 102/389 (26.22%), Postives = 180/389 (46.27%), Query Frame = -2

Query:  698 KMKKSGCKPTTSTFNTLMKGYGNI-GKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLD-----------------------VTDT---------NGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNV 1756
            K++ SG       F TL  GY N  G    SS      L+D  V+ N+      +R       +EE +  +  MV  G  PD++   T+ R + + G+T +A +++  ++ +   P+V T  ++++GYCK G +  AL  + RM    V P++V +N++++   D                       +T T         +GV  A+ L++E    G  PDV+T++ ++N     G +D+  +  +DM  +G +P+V   +I+ +     G   +AE LL  M + G  P+VV F  +I+  C  G +  A  + EKM + G  PN  +Y  L+ G+ + K+  +A E L+ M  +G   +  T   +  A    G + +A  I+  +
Sbjct:   62 KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALED--VESNNH-----LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

HSP 6 Score: 56.225 bits (134), Expect = 9.680e-7
Identity = 36/133 (27.07%), Postives = 64/133 (48.12%), Query Frame = -2

Query:  662 IRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRGIASNTKDDI 1060
            +R GE  E    L +M   G  P+++  TT+I G+C  GK   AA++ E +   G  P++ TY  +I GY +A +   A   L +++   +S +  T   +  +    G L +A  ++   DR +  +   D+
Sbjct:  113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL---DRMLQRDCYPDV 239

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 1.058e-55
Identity = 132/486 (27.16%), Postives = 237/486 (48.77%), Query Frame = -2

Query:  581 RTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRGIASNT--KDDIPAEGMEKTYKKQSLSASYSNVLQMPGV 2032
            R KL    + + K  +A  +F  + +    P+++ ++ L+SA+ ++ ++  +ISL  +++  G+  +   ++ +IN F     +  A+ +  KM K G +P   T ++L+ GY +  +  E+  L++ M   G  QPN  T+N LI          EA  ++ RMVA G  PD+VTY  +     + G+T  A  ++ +M+  K+ P V     I+ G CK  +M +AL     M+  G++PN+V ++SL+    +    +     L+ M E  + PDV TFS +++A+   G + + ++++D+MVK  I+P +  +S L  G+       EA+ +   M      P+VV + T+I G+C   ++     V+ +M + G+  N  TY  LI G  +A     A+E+ + M   G+     T   + D     G L +A  + + + R     T    +I  EGM K  K +     + N L + GV
Sbjct:   49 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGV 532

HSP 2 Score: 204.142 bits (518), Expect = 1.980e-54
Identity = 111/424 (26.18%), Postives = 223/424 (52.59%), Query Frame = -2

Query:  752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023
            L++ L    K  EA  + + +  +G +P LVTY  +V+ L +        +L++K+E+  ++P  +++N +I+   +  ++ +A+ +F++M+  G +P   T+++L+    N G+  ++S+LL  M++   + P+  T++ LI A+  +  + EA  +   MV   + P +VTY+++   +        A+QM   M +    P+V T   ++ G+CK   + E +     M + G+  N V +N L++G     D +   E    M   GV P+++T++T+++     G ++K   +F+ + ++ +EP ++ ++I+ +G  +AG+  +   L  ++   GV+P+VV + T+ISG+C  G    A  ++++M E G  PN   Y TLI           + EL++ M   G + + STI LV +
Sbjct:  192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614

HSP 3 Score: 188.734 bits (478), Expect = 3.072e-49
Identity = 106/418 (25.36%), Postives = 210/418 (50.24%), Query Frame = -2

Query:  779 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVK---PDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAE 2023
            L+N    + +   A  +   + + G++P +VT ++L++     KR    ++L+ ++   G +P+++ FN +I+         EAM +  +M   GC+P   T+  ++ G    G  + +  LL  M Q G ++P    YN +I   C   ++++A N+   M   G+ P+VVTY+++       G    A +++ +M   K+ P+V T   ++  + KEG + EA +    M +  + P++V ++SL+ GF      + +DEA  + E    K   PDV+T++T++  +     +++  E+F +M + G+  +   ++IL +G  +AG+   A+ +   M   GV PN++ + T++ G C  GK+  A  V+E +    + P + TY  +I G  +A +     +L   +  KG+  +
Sbjct:  122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF---CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PP103_ARATH (Pentatricopeptide repeat-containing protein At1g64100 OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 7.768e-55
Identity = 119/424 (28.07%), Postives = 227/424 (53.54%), Query Frame = -2

Query:  752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023
            L+N L  +G+  EA  + N +  +G    +VTY  +V+ + ++   KS ++L+SK+EE  +KPD ++++A+I+   + G+  +A  +F +M + G  P   T+N ++ G+ + G+  ++ +LL  M++   + P+  T+N LI A   +  + EA  +   M+   + PD VTYN++   + +      A+ M F++     +P+V T   I+  YC+   + E ++ +  +   G+  N   +N+L+ GF +V + N   +    M   GV PD IT + ++  +     +++  E+F+ +  + I+ D  A++I+  G  +  +  EA  L  S+   GV+P+V  +  +ISG+C    ++ A  ++ KM + G  P+ +TY TLI G  +A +  K+ EL+  M   G S +  TI++VAD
Sbjct:  232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE-REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM-FDLM---ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650

HSP 2 Score: 168.318 bits (425), Expect = 2.681e-42
Identity = 99/423 (23.40%), Postives = 197/423 (46.57%), Query Frame = -2

Query:  758 KLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLV 2026
            K++ + +   +P  A  ++  +        + ++  L+       +    +S   K+ + G +PD + FN +++       + EA+ +F  M ++G     + F+ +++    IG                 + P   T+N LI   C +  + EA  +V++MV  G+H DVVTY TI     + G+T  A  ++ +M+   + P+V     I+   CK+G+ ++A      M E G+ PN+  +N ++ GF      +     L  M E  + PDV+TF+ +++A    G + + +++ D+M+   I PD   ++ +  G+ +     +A+ + + M      P+VV F T+I  +C A +++   ++  ++   G+  N  TY TLI G+ E      A++L Q M   G+  +  T  ++
Sbjct:  111 KVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE----IG-----------------LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508

HSP 3 Score: 140.198 bits (352), Expect = 4.246e-33
Identity = 95/387 (24.55%), Postives = 185/387 (47.80%), Query Frame = -2

Query:  674 NVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNT----------IARAYAQTG---ET--YRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVD-RGIASNT 1786
            ++ +A+  F  M +S    T    N ++  +  + + + +  L   M +   +  N  ++NILI+ +C+   +  + +   ++   G  PDVVT+NT          I+ A A  G   ET    A  +  +M    + P V T   ++ G C EG + EA   V +M   G+  ++V + ++V G   + DT      L+ MEE  +KPDV+ +S I++     G     Q +F +M++ GI P+V  ++ +  G+   G   +A+ LL  M +  + P+V+ F  +IS     GK+  A ++ ++M    + P+  TY ++I+G+ +  +   A+ +  +M    +    + I +   A R    ++E  ++++ +  RG+ +NT
Sbjct:   86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR----VDEGMQLLREISRRGLVANT 467

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.372e-54
Identity = 112/424 (26.42%), Postives = 220/424 (51.89%), Query Frame = -2

Query:  752 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2023
            L+N L   GK  +A  + + + E G +P  VTY  ++  + +  +    + L+ K+EE  +K D++ ++ +I+   + G++  A  +F +M+  G K     + TL++G+   G+ ++ +KLL  M++   + P+   ++ LI  +  +  + EA  +   M+  G+ PD VTY ++   + +  +  +A  M+  M +    PN+RT  I++ GYCK   + + L    +M   GV  + V +N+L++GF ++       E    M    V+PD++++  +++     G  +K  EIF+ + K+ +E D+  ++I+  G   A +  +A  L  S+   GV+P+V  +  +I G C  G ++ A  ++ KM E G +PN  TY  LI  +       K+ +L++ ++  G S + ST+++V D
Sbjct:  183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605

HSP 2 Score: 192.2 bits (487), Expect = 1.816e-50
Identity = 120/475 (25.26%), Postives = 231/475 (48.63%), Query Frame = -2

Query:  635 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEF---GVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLV-------ADAWRAIGLLNEARRIIKNVDRGIASNTKDDIPAEGMEKTY 2029
            + L+N L  +G+  EA  + + + E GHKPTL+T  ALV+ L    +    + LI ++ E G +P+ + +  ++    +SG    AM++ +KM++   K     ++ ++ G    G  + +  L   M   G  + +   Y  LIR +C     ++   ++  M+   + PDVV ++ +   + + G+   AE++  EM    ++P+  T   ++ G+CKE  + +A   +  M   G  PN+  FN L+ G+      N +D+ L L  +    GV  D +T++T++  +   G ++  +E+F +MV   + PD+ ++ IL  G    GEP +A  +   + K  ++ ++ I+  +I G C A K++ A  ++  +   GV P++ TY  +I G  +     +A+ L + MEE G S    T  ++        DA ++  L+ E +R   +VD        D +    ++K++
Sbjct:  146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY---CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616

HSP 3 Score: 188.734 bits (478), Expect = 2.570e-49
Identity = 117/447 (26.17%), Postives = 215/447 (48.10%), Query Frame = -2

Query:  698 RARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNV 2038
            R R+ +++I     K  +A  +F  +T    +P L+ ++ L S + R K+Y  ++ L  ++E  G+  +    + MIN       +  A     K+ K G +P T TF+TL+ G    G+  E+ +L++ M++ G+ +P   T N L+   C    + +A  ++ RMV +G  P+ VTY  + +   ++G+T  A +++ +M+  K+  +     II+ G CK+G++  A      M+              +KGF                     K D+I ++T++  +  AG  D   ++  DM+K  I PDV AFS L   +++ G+  EAE L   M + G+ P+ V +T++I G+C   +++ A  + + M   G  PN+ T+  LI GY +A       EL + M  +G+ A+  T   +   +  +G L  A+ + + +
Sbjct:   43 RLRSGIVDI-----KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME--------------IKGF---------------------KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448

HSP 4 Score: 128.642 bits (322), Expect = 1.991e-29
Identity = 75/297 (25.25%), Postives = 146/297 (49.16%), Query Frame = -2

Query: 1151 VRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGL 2041
            V A + L++  +++GK +EA+ +   + + G  P  VTYT+L+    +  +      ++  +   G  P+   FN +IN + ++  + + +++F+KM   G    T T+NTL++G+  +GK E + +L + M+    V+P+  +Y IL+   C+    E+A  +  ++  S M  D+  YN I        +   A  +   +    V P+V+T  I++ G CK+G+++EA     +M+E G  PN   +N L++  L   D     + +  ++  G   D  T   +++  S   L
Sbjct:  317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Match: PP100_ARATH (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.546e-54
Identity = 118/426 (27.70%), Postives = 218/426 (51.17%), Query Frame = -2

Query:  752 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVAD 2029
            T L++ L    K  EA  + + + + G +P LVTY  +V+ L +       ++L++K+E   +K + ++FN +I++  +  +V+ A+ +F +M+  G +P   T+N+L+    N G+  ++S+LL  ML+   + PN  T+N LI A+  +  + EA  +   M+   + PD +TYN +   +        A+QM   M +    PN++T   ++ G+CK   + + +     M + G+  N V + ++++GF    D +        M    V  D++T+S +++   S G +D    IF  + K+ +E ++  ++ + +G  +AG+ GEA  L  S+    ++P+VV + T+ISG C+   +  A  ++ KM E G  PN  TY TLI           + EL++ M   G   + STI LV +
Sbjct:  192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613

HSP 2 Score: 188.348 bits (477), Expect = 3.884e-49
Identity = 106/413 (25.67%), Postives = 200/413 (48.43%), Query Frame = -2

Query:  791 TKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKG 2029
            + L+N      +  +A  + + + E G+KP   T+T L+  L    +    ++L+ ++ + G +PD + +  ++N   + G++  A+ +  KM+ +  K     FNT++         E +  L   M   G ++PN  TYN LI   CN     +A  ++  M+   ++P+VVT+N +  A+ + G+   AE++  EM    + P+  T  +++ G+C    + EA +    M      PN+  +N+L+ GF          E    M + G+  + +T++TI+  +  AG  D  Q +F  MV   +  D+  +SIL  G    G+   A  +   + K  ++ N+ I+ T+I G C AGK+  A   ++  C + + P++ TY T+I G    +   +A++L + M+E G
Sbjct:  157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565

HSP 3 Score: 182.57 bits (462), Expect = 3.967e-47
Identity = 107/447 (23.94%), Postives = 222/447 (49.66%), Query Frame = -2

Query:  692 RTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDR 2032
            R  L N L +  K  +A  +F  + +    P++V +  L+SA+ ++ +++ +ISL  +++  G+  D   ++  IN F     +  A+ +  KM K G +P   T ++L+ GY +  +  ++  L++ M++ G  +P+  T+  LI          EA  +V +MV  G  PD+VTY T+     + G+   A  ++ +M+  ++  NV     I+   CK  ++  A+     M+  G++PN+V +NSL+    +    +     L+ M E  + P+V+TF+ +++A+   G + + +++ ++M++  I+PD   +++L  G+       EA+ +   M      PN+  + T+I+G+C   ++     ++ +M + G+  N  TY T+I G+ +A     A+ + + M    +  +  T  ++     + G L+ A  I K + +
Sbjct:   51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496

HSP 4 Score: 75.0998 bits (183), Expect = 1.682e-12
Identity = 53/257 (20.62%), Postives = 116/257 (45.14%), Query Frame = -2

Query: 1346 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEES-------------------SKLLELMLQDGNV------------QPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEAL 2023
            L+N      +  EA+ +F  +  +   P + TY  L++   + KR +  + L  ++ + G+  +++ +  +I  F ++G+   A  +F++M  +       T++ L+ G  + GK + +                   + ++E M + G V            +P+  TYN +I   C+K  ++EA ++  +M   G  P+  TYNT+ RA  +  +   + ++I EM+++    +  T   +VT    +G + ++ 
Sbjct:  369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKSF 624

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: A0A067ED93_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008925mg PE=4 SV=1)

HSP 1 Score: 832.402 bits (2149), Expect = 0.000e+0
Identity = 396/557 (71.10%), Postives = 471/557 (84.56%), Query Frame = -2

Query:  374 MNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNV--DRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYDSSSLFPAQASVF------GVQPGIICQKQLTTTREYRMHGQFVNSCKLVFIN 2020
            MNIL+ KGKP EA +IFN L EEGH+PTL+TYT LV+ALTR KR+KSI+SLISKVE++GMKPDSILFNAMINA SESGNV EAMKIFQKMK SGCKPTTST+NTL+KGYGN+GK EES KLL+LM QD NV+PNDRTYNIL+RAWC+K +IEEAWNVV++MVASG+ PD VTYNT+ARAYAQ GETYRAEQM+FEMQNN+V PN RTCGIIV+GYCKEGNM +A+RF+YRMKEL V PNLVVFNSL+KGFLD+ D++GVD+ALTLMEEFGVKPDV+TFSTIM+AWSSAGLM KCQEIFDDMVKAGIEPD+H FSILAKGY+RAGEP +AES+L SM K+GV PNVV+FTTVISGWC A KM  A  +YEKMCEIG+ PNL TYETL+WGYGEAKQPW+AEELLQ+MEEKG+  ++STIQLVAD+WRAIGL  EA+R++K+   DR    N KD+I  E +   ++KQ+LSAS S  LQ+PGV  +E NGSS++K RSQ+VL+   S +++ A  S+F      GVQP ++C+KQ +   +    GQFVN+ +LVFIN
Sbjct:    1 MNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVLKSAEEDRQSMPNKKDEIAVESI---HRKQNLSASNSTFLQIPGVVSSEHNGSSAAKIRSQIVLR---SDTVWTATKSLFVNTYGSGVQPMVVCRKQCS---QVGTCGQFVNAYRLVFIN 548

HSP 2 Score: 193.741 bits (491), Expect = 1.560e-49
Identity = 102/369 (27.64%), Postives = 191/369 (51.76%), Query Frame = -2

Query:  920 LMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKV-EENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARV 2023
            ++N   E G   EA  IF  + + G KPT  TY  L+     + + +  + L+  + ++  +KP+   +N ++ A+    +++EA  +  KM  SG +P   T+NTL + Y   G+   + ++L   +Q+  V+PN+RT  I++  +C + N+E+A   ++RM    +HP++V +N++ + +    ++   ++ +  M+   V P+V T   I+  +   G M +       M + G++P++ VF+ L KG++   +    +  LT M ++GV P+V+ F+T+++ W +A  M +   I++ M + GI P++  +  L  GY  A +P  AE LL  M + GV+P       V   W   G    A RV
Sbjct:   70 MINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQML-FEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFGVKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRV 437

HSP 3 Score: 145.206 bits (365), Expect = 3.423e-33
Identity = 79/311 (25.40%), Postives = 159/311 (51.13%), Query Frame = -2

Query: 1127 QTVRARTKLMNILIE----KGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIF 2047
            + V+   +  NIL+     K   +EA  +   +   G +P  VTY  L  A  +         ++ +++ N ++P+      +++ + + GN+++AM+   +MK+    P    FN+L+KG+ +I  ++   K L LM + G V+P+  T++ ++ AW +   + +   +   MV +G+ PD+  ++ +A+ Y + GE  +AE ++  M+   V PNV     +++G+C    M  A+    +M E+G+ PNL  + +L+ G+ +       +E L +MEE GV+P   T   + ++W + GL  + + + 
Sbjct:  129 KNVKPNDRTYNILVRAWCSKNSIEEAWNVVYKMVASGIQPDAVTYNTLARAYAQYGETYRAEQMLFEMQNNQVRPNERTCGIIVSGYCKEGNMEDAMRFLYRMKELEVHPNLVVFNSLIKGFLDIKDSDGVDKALTLMEEFG-VKPDVVTFSTIMDAWSSAGLMGKCQEIFDDMVKAGIEPDIHVFSILAKGYVRAGEPQKAESILTSMRKYGVHPNVVMFTTVISGWCNAVKMQRAMSIYEKMCEIGINPNLKTYETLLWGYGEAKQPWRAEELLQVMEEKGVRPKKSTIQLVADSWRAIGLAREAKRVL 438

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: M5VTX9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003144mg PE=4 SV=1)

HSP 1 Score: 821.231 bits (2120), Expect = 0.000e+0
Identity = 385/580 (66.38%), Postives = 474/580 (81.72%), Query Frame = -2

Query:  395 DSEVSSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRG---IASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYDSSS---------LFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNS 2098
            DS + S C+VC G  SCQ VR+RTKLMN LI + KP EAQ IF SL EEGH+PTL+TYT LV+ALTR +R+KSI  L+S+VEENG+KPDSILFNAMINA SESGN+ +AMKIFQKM++SGCKPTTSTFNTL+KGYG  GK EES KLLELMLQD N +PNDRTYN+++RAWCNK  I +AWN+V++MVASG+ PDVVTYNT+ARAYA+ GET  AE+++ EMQNNKV PN RTCGIIV GYCKEG+MTEALRFVYRMK+LGV PNLV+FNSL+KGFLD+TDT+GVDE LTLMEEFG+KPDVITFSTIM+AWSSAGLM+KCQE+F+DM+KA IEPD+HAFSILAKGY+RAGEPG+AESL+ SMGK+GV PNVVIFTT++SGWCTAGKM HA  ++EKMCE+ + PNL T+ETLIWGYGEA+QPWKAE+LL IMEEKG+  E+ TIQLVA+AWR IGL+ EA R++ + +     + +N +D +P + +E   +KQ+LS S+ NVL +PGV +++ NG S++  R QM+ + +  SS         +  A +S F VQP IIC++Q  T  +  M  QFVN+
Sbjct:   19 DSGIQSHCLVCLGKTSCQVVRSRTKLMNSLIARRKPHEAQSIFKSLAEEGHRPTLITYTTLVAALTRQRRFKSIPLLLSEVEENGLKPDSILFNAMINASSESGNIDDAMKIFQKMEESGCKPTTSTFNTLIKGYGIAGKPEESLKLLELMLQDENTKPNDRTYNMIVRAWCNKKKINQAWNMVYKMVASGIQPDVVTYNTLARAYAENGETNIAERLMLEMQNNKVNPNERTCGIIVNGYCKEGSMTEALRFVYRMKDLGVHPNLVIFNSLIKGFLDITDTDGVDEVLTLMEEFGMKPDVITFSTIMDAWSSAGLMEKCQEVFNDMIKADIEPDIHAFSILAKGYVRAGEPGKAESLMISMGKYGVHPNVVIFTTIMSGWCTAGKMEHAWSIHEKMCEMSIAPNLKTFETLIWGYGEARQPWKAEDLLHIMEEKGVIPEKRTIQLVAEAWRVIGLMTEAMRVLNDSEEEREVVQNNRRDKVPEQSLEMINRKQNLSTSHPNVLPIPGVVVSD-NGGSAANIRGQMISRGFQFSSDSMQNATKTMCLAHSSAFRVQPLIICRRQFQT--QVGMCRQFVNT 595

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: A0A068U574_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_9 OS=Coffea canephora GN=GSCOC_T00041869001 PE=4 SV=1)

HSP 1 Score: 820.461 bits (2118), Expect = 0.000e+0
Identity = 408/625 (65.28%), Postives = 488/625 (78.08%), Query Frame = -2

Query:  380 NRRSIAMGKHQEGTIMXXXXXXXXXXXXXXVDEKEQSHPGTGSADSEVSSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNV--DRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLK--KYDSSSLFPAQASVFGVQP-GIICQKQLTTTREYRMH---GQFVNSCKLVF 2230
            N +S+  GK Q G+  SK   +AS+   S  + K+ + P   S  SE+   C+VCSGNNSCQTVR+RTKLMNILIEKGKP E   +F  LTEEGH+P+LVTYT +++ALT  KR+KSI  L+SKVEENG+KPDSI FNAMINAFSESGNVKEAMKIF+KM+  GCKPT STFNTL+KG+G IGK EES KLLE+M  + NV+PNDRTYNIL+RAWC+K NI EAWNVV+RMVASG+ PDVVTYNTIARAYAQ GET RAE MIF+MQNN VAPN RTCGIIV GYCKEGN+T+ALRFVYR+K+LGV PNLV+FNSL+KGFLDVTDTNGVDE LTLME FGVKPDVITFSTIMNAWSSAGLMDKC+EIFDDM KAGIEPD+HAFSILAKGY+RAGEP +AE+LL  M K  V PNVVIFTT+ISGWC+ GKM +A ++YEKMC++ ++PNL T+ETLIWGYGEAKQPWKAEELL+IME  G+   ++TIQLVADAWRAIG LNEA RI+     D+ +  N  +  P EG  K ++K+   ASYSN+ Q+PG  +  QN S     RSQ +LK  K  S SL  A  S+   +  G+  +  +   R++++     ++VN C+LVF
Sbjct:    7 NSQSLIGGKGQNGSATSKSHNQASSSKESVSN-KDLTAPIPASVTSEIQFGCLVCSGNNSCQTVRSRTKLMNILIEKGKPHEVHSVFRDLTEEGHRPSLVTYTTVLAALTLQKRFKSIPLLLSKVEENGLKPDSIFFNAMINAFSESGNVKEAMKIFKKMRDKGCKPTISTFNTLIKGFGIIGKPEESLKLLEMMSMEENVKPNDRTYNILVRAWCSKKNIPEAWNVVYRMVASGVSPDVVTYNTIARAYAQNGETSRAEAMIFQMQNNNVAPNQRTCGIIVDGYCKEGNVTDALRFVYRIKDLGVNPNLVIFNSLIKGFLDVTDTNGVDETLTLMEGFGVKPDVITFSTIMNAWSSAGLMDKCEEIFDDMQKAGIEPDIHAFSILAKGYVRAGEPEKAEALLEIMDKSRVHPNVVIFTTIISGWCSTGKMEYALKMYEKMCKMDISPNLKTFETLIWGYGEAKQPWKAEELLEIMENVGVVPRKNTIQLVADAWRAIGFLNEAIRILNGTPNDQPLMVNASNGRPTEGQGKVHQKEESIASYSNLWQIPGTIVTNQNVSDVVNLRSQTLLKRSKLSSESLSMANKSMLVTRSCGLKVKSLMEFPRQFQILVGIHEYVNPCRLVF 630

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: K7L4T2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 806.209 bits (2081), Expect = 0.000e+0
Identity = 397/626 (63.42%), Postives = 484/626 (77.32%), Query Frame = -2

Query:  377 MGKHQEGTIMXXXXXXXXXXXXXXVDEKEQSHPGTGSADSEV--SSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRII------KNVDRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYD------SSSLFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFI 2212
            M   ++G +MS +  K  +V+V    + +++ P   S   E    S C++C GNNSCQTV ARTKLMN LI KGKP EAQ +FN+LTEEGHKPTL+TYT LV+ALTR KR+KSI +L+SKV +NGMKPDSIL NAMINAFSESG V EAMKIFQKMK+ GCKPTTST+NTL+KG+G  G+  ES KLLE+M QD NV+PNDRTYNILI+AWC K  +EEAWNV+H+MVASG+ PDVVTYNT+ARAYAQ GET RAE++I +M  N V PN RTCGII++GYCKEGNM EALRF+YRMKELGV PN VVFNSL+KG+LD TDTNGVDEALTLMEEFG+KPDV+TFSTIMNAWSSAGLM+ C+EIF+DMVKAGIEPD+HA+SILAKGY+RAG+P +AE+LL SM K+GVQPNVVIFTT+ISGWC AGKM+ A R+ EKM E+G +PNL TYETLIWGYGEAKQPWKAEELL  MEE+G+  E ST+QLVADAWRAIGL  EA RI+        +D+   S   D I  + +E  YKKQ LSAS SN+LQ+P V +     +++   R +MV+K  D      +S  F    S +GVQP I+ ++Q+    + ++   F++ C++V I
Sbjct:    1 MDSSKKGALMSNESAKDLSVMVLKQHQYKKNQPKLSSTPQERRDQSHCLICRGNNSCQTVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDS---DKIQVQSLESIYKKQKLSASPSNLLQIPDVVVTHPTRTTNGNIRCRMVVKLSDNMRNVTTSMFFVRTRSSYGVQPLIVSRQQI----QNQVVRPFLDCCRVVSI 619

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: K7KRN3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 805.823 bits (2080), Expect = 0.000e+0
Identity = 396/626 (63.26%), Postives = 486/626 (77.64%), Query Frame = -2

Query:  377 MGKHQEGTIMXXXXXXXXXXXXXXVDEKEQSHPGTGSADSEV--SSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRII------KNVDRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYD------SSSLFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFI 2212
            M   ++G +MS +  K  +V+V    + +++ P   S   E    S C++C GNNSCQTV ARTKLMN LI KGKP EAQ +F++LTEEGHKPTL+TYT LV+ALTR KR+KSI +L+SKV +NGMKPDSIL NAMINAFS+SG V EAMKIFQKMK+ GCKPTTST+NTL+KG+G +G+  ES KLLE+M QD NV+PNDRTYNILI+AWC K  +EEAWNV+H+MVASG+ PDVVTYNT+ARAYAQ GET +AE++I +MQ NKV PN RTCGII++GYCKEGNMTEALRF+YRMKELGV PN VVFNSL+KG+LD TDTNGVDEALTLMEEFG+KPDV+TFSTIMNAWSSAGLMD C+EIF+DMVKAGIEPD+HA+SILAKGY+RAG+P +AESLL SM K+GVQ NVVIFTT+ISGWC AGKM+ A  + EKM E+G +PNL TYETLIWGYGEAKQPWKAEE+L  MEE+G+  E ST+QLVADAWRAIGL  EA RI+        +D+   S   D +P + +E  YKKQ LSAS SN+LQ+  V +     +++   RS+MV+K  D      +S  F    S +GVQP I+  +Q+    + ++   F++ C++V I
Sbjct:    1 MDSSKKGALMSNESAKDLSVMVLKQQQYKKNKPKLSSTPQERCDQSHCLICRGNNSCQTVHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDS---DKMPVQSLESIYKKQKLSASPSNLLQIRDVVVAHPERTTNGNIRSRMVVKLSDNMRNVTTSMFFVRTRSSYGVQPLIVSSQQI----QNQVVRPFLDCCRVVSI 619

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: W9S972_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001881 PE=4 SV=1)

HSP 1 Score: 805.438 bits (2079), Expect = 0.000e+0
Identity = 387/596 (64.93%), Postives = 482/596 (80.87%), Query Frame = -2

Query:  467 MGKHQEGTIMXXXXXXXXXXXXXXVDEKEQSHPGTGSADSEVSSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRG----IASNTKDDIPAEGMEKTYKKQSLSA-SYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYDSSS---------LFPAQASVFGVQ 2212
            MG+ QEGTI SK+ V+ S ++ SH+ +KE+    + S DS + S+C+VC GNNSC+TVR+RTKLMNILIE+G+P E Q IFNSL EEGH+PTL+TYT LV+ALTR KR+KS+ +L+SK++ENGMKPDSILFNAMINAF+ESG V +AMKIF +M+K+GC+PTTSTFNTL+KGYG  GK EES KLLELM +  N +PNDRTYNIL+RAWCNK  I+EAWNVV++MVASG+ PDVVTYNT+A+AYA+ GET+RAE+MI EM++N+V PN RTCGII+ GYCKEGNM +ALRFVYRMKELGV PNLVVFNSL+KGFL++TDT+G++EAL++ME+FG+ PDVITFSTIMNAW SAGLMDKCQEIF+DM+K+GIEPD+HAFSILAKGY+RA EPG+A+SLL SM K+GV  NVVIFTT+ISGWC+AGKM+ A R YEKMCE+ V+PNL T+ETLIWGYGEAKQPW AEELL IME+KG+S E+ST +LVA+AWRAIG + EA+RI+   +      +    K++   EG+E   KKQ L A SY N+LQ+PG+   +   ++  K   QMV K ++ SS         +F    SV GV 
Sbjct:    1 MGRSQEGTITSKERVQTSPIMESHMHKKEKVQVFSNSIDSHIQSRCLVCLGNNSCRTVRSRTKLMNILIERGRPHEVQTIFNSLVEEGHRPTLITYTTLVAALTRQKRFKSVPALLSKLKENGMKPDSILFNAMINAFTESGKVDDAMKIFWRMEKNGCRPTTSTFNTLIKGYGIAGKPEESLKLLELMSKYENAKPNDRTYNILVRAWCNKKKIDEAWNVVYKMVASGVQPDVVTYNTLAKAYAENGETWRAERMILEMESNRVRPNERTCGIIINGYCKEGNMKDALRFVYRMKELGVHPNLVVFNSLIKGFLEITDTDGINEALSMMEKFGINPDVITFSTIMNAWISAGLMDKCQEIFNDMLKSGIEPDIHAFSILAKGYVRASEPGKAQSLLTSMSKYGVHANVVIFTTIISGWCSAGKMDLAMRAYEKMCEMDVSPNLKTFETLIWGYGEAKQPWNAEELLHIMEQKGVSPEKSTFRLVAEAWRAIGFITEAKRILNEAEEEEKDVLPKTAKEEKSLEGLETICKKQHLRASSYPNILQVPGLVAEKPTAANMRKG--QMVSKGFEYSSEGIQNATKFIFLPHTSVSGVH 594

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: K7L4T4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 804.283 bits (2076), Expect = 0.000e+0
Identity = 389/598 (65.05%), Postives = 469/598 (78.43%), Query Frame = -2

Query:  377 EKEQSHPGTGSADSEVSSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRII------KNVDRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYD------SSSLFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFI 2134
            +K Q    +   +    S C++C GNNSCQTV ARTKLMN LI KGKP EAQ +FN+LTEEGHKPTL+TYT LV+ALTR KR+KSI +L+SKV +NGMKPDSIL NAMINAFSESG V EAMKIFQKMK+ GCKPTTST+NTL+KG+G  G+  ES KLLE+M QD NV+PNDRTYNILI+AWC K  +EEAWNV+H+MVASG+ PDVVTYNT+ARAYAQ GET RAE++I +M  N V PN RTCGII++GYCKEGNM EALRF+YRMKELGV PN VVFNSL+KG+LD TDTNGVDEALTLMEEFG+KPDV+TFSTIMNAWSSAGLM+ C+EIF+DMVKAGIEPD+HA+SILAKGY+RAG+P +AE+LL SM K+GVQPNVVIFTT+ISGWC AGKM+ A R+ EKM E+G +PNL TYETLIWGYGEAKQPWKAEELL  MEE+G+  E ST+QLVADAWRAIGL  EA RI+        +D+   S   D I  + +E  YKKQ LSAS SN+LQ+P V +     +++   R +MV+K  D      +S  F    S +GVQP I+ ++Q+    + ++   F++ C++V I
Sbjct:   25 KKNQPKLSSTPQERRDQSHCLICRGNNSCQTVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDS---DKIQVQSLESIYKKQKLSASPSNLLQIPDVVVTHPTRTTNGNIRCRMVVKLSDNMRNVTTSMFFVRTRSSYGVQPLIVSRQQI----QNQVVRPFLDCCRVVSI 615

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: A0A059CW34_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03818 PE=4 SV=1)

HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0
Identity = 389/625 (62.24%), Postives = 484/625 (77.44%), Query Frame = -2

Query:  374 MGKHQEGTIMXXXXXXXXXXXXXXVDEKEQSHPGTGSADSEVSSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRGIASNT---KDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYDSSSLFPAQAS---------VFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFIN 2212
            M K QEGTI SKK V++S ++   + E       + S+  E  S C++C  NNSC+TVR+RTKLMNILIE+ KPQEA  IF+ LTEEGH+PTL+TYT L++A    KR+ SI +LISKVEE+G+KPD+I FNA+INA SESG + EAMK FQKMK S C+PTTSTFNTL+KGYG +GK EE+ KLLELM ++ N++PN+RTYNIL+R WCNK NI EAWNVV+RMV SGM PDVVT+NT+ARAY Q GET +AE MI EMQNNKVAPN RTCGIIV+GYCKEGNMTEA+RF+ RMK+LGV PNLVVFNSL+KGFLD+TDT+GVD+ALTLM+EFGVKPDV+TFSTIMNAWSSA LM+KCQEIF+DMVKAGIEPD+HAFSILAKGY RAGEP +AE LL SM K G+ PNVVIFTT++SGWCT  KM HA RVY+ MC+ G++PNL T+ETLIWGYGEAKQPWKAE+LL+ MEEKG+  E STIQLVADAWR++GL+ EA+R++ N    + + +   KDDIP + +EK Y+K    ASYS+ L   G   ++++GS ++   S M+ K   SSSL   +A+         +  V+P   C+KQ     + R+ G  V+S ++V ++
Sbjct:    1 MTKQQEGTISSKKQVESSPIMERLLQEDNHFQSVSSSSSLENQSCCLICLSNNSCRTVRSRTKLMNILIERKKPQEAHSIFDCLTEEGHRPTLITYTTLLAAFAIQKRFDSIAALISKVEESGLKPDAIFFNAVINALSESGKIGEAMKAFQKMKDSECRPTTSTFNTLIKGYGIMGKPEEALKLLELMKREENLKPNERTYNILVRVWCNKKNITEAWNVVYRMVGSGMQPDVVTFNTLARAYVQNGETSKAEGMILEMQNNKVAPNDRTCGIIVSGYCKEGNMTEAMRFMRRMKDLGVHPNLVVFNSLIKGFLDITDTDGVDQALTLMQEFGVKPDVVTFSTIMNAWSSAALMEKCQEIFNDMVKAGIEPDIHAFSILAKGYARAGEPEKAELLLTSMAKCGLFPNVVIFTTIVSGWCTVSKMEHAMRVYKNMCDAGISPNLKTFETLIWGYGEAKQPWKAEDLLETMEEKGVFPELSTIQLVADAWRSVGLVPEAKRVLNNYKDKLDNQSKTKKDDIPMQSLEKIYQKHKRHASYSSPLPTSGSVASDKDGSPTTALGSTMLPKGRISSSLKMGKATKSVLLKNTCLIRVEPP-QCRKQ--QHGQVRLCGHSVSSYRMVALH 622

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: A0A0B2S4J5_GLYSO (Pentatricopeptide repeat-containing protein (Fragment) OS=Glycine soja GN=glysoja_036380 PE=4 SV=1)

HSP 1 Score: 781.556 bits (2017), Expect = 0.000e+0
Identity = 378/567 (66.67%), Postives = 454/567 (80.07%), Query Frame = -2

Query:  377 VRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRII------KNVDRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYD------SSSLFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFI 2041
            V ARTKLMN LI KGKP EAQ +F++LTEEGHKPTL+TYT LV+ALTR KR+KSI +L+SKV +NGMKPDSIL NAMINAFS+SG V EAMKIFQKMK+ GCKPTTST+NTL+KG+G +G+  ES KLLE+M QD NV+PNDRTYNILI+AWC K  +EEAWNV+H+MVASG+ PDVVTYNT+ARAYAQ GET +AE++I +MQ NKV PN RTCGII++GYCKEGNMTEALRF+YRMKELGV PN VVFNSL+KG+LD TDTNGVDEALTLMEEFG+KPDV+TFSTIMNAWSSAGLMD C+EIF+DMVKAGIEPD+HA+SILAKGY+RAG+P +AESLL SM K+GVQ NVVIFTT+ISGWC AGKM+ A  + EKM E+G +PNL TYETLIWGYGEAKQPWKAEE+L  MEE+G+  E ST+QLVADAWRAIGL  EA RI+        +D+   S   D I  + +E  YKKQ LSAS SN+LQ+P V +     +++   RS+MV+K  D      +S  F    S +GVQP I+  +Q+    + ++   F+N C++V I
Sbjct:    1 VHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDS---DKIQVQSLESIYKKQKLSASPSNLLQIPDVVVAHPERTTNGNIRSRMVVKLSDNMRNVTTSMFFVRTRSSYGVQPLIVSSQQI----QNQVVRPFLNCCRVVSI 560

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Match: A0A0B2Q4W9_GLYSO (Pentatricopeptide repeat-containing protein (Fragment) OS=Glycine soja GN=glysoja_002703 PE=4 SV=1)

HSP 1 Score: 776.933 bits (2005), Expect = 0.000e+0
Identity = 377/567 (66.49%), Postives = 452/567 (79.72%), Query Frame = -2

Query:  377 VRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVSALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKPTTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNVVHRMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCKEGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVITFSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMGKFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGVTPNLATYETLIWGYGEAKQPWKAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRII------KNVDRGIASNTKDDIPAEGMEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYD------SSSLFPAQASVFGVQPGIICQKQLTTTREYRMHGQFVNSCKLVFI 2041
            V ARTKLMN LI KGKP EAQ +FN+LTEEGHKPTL+TYT LV+ALTR KR+KSI +L+SKV +NGMKPDSIL NAMINAFSESG V EAMKIFQKMK+ GCKPTTST+NTL+KG+G  G+  ES KLLE+M QD NV+PNDRTYNILI+AWC K  +EEAWNV+H+MVASG+ PDVVTYNT+ARAYAQ GET +AE++I +M  N V PN RTCGII++GYCKEGNM EALRF+YRMKELGV PN VVFNSL+KG+LD TDTNGVDEALTLMEEFG+KPDV+TFSTIMNAWSSAGLMD C+EIF+DMVKAGIEPD+HA+SILAKGY+RAG+P +AE+LL SM K+GVQPNVVIFTT+ISGWC AGKM+ A R+ EKM E+G +PNL TYETLIWGYGEAKQPWKAEELL  MEE+G+  E ST+QLVADAWRAIGL  EA RI+        +D+   S   D I  + +E  YKKQ LSAS SN+LQ+P V +     +++   R +MV+K  D      +S  F    S +GVQP I+ ++Q+    + ++   F++ C++V I
Sbjct:    1 VHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDS---DKIQVQSLESIYKKQKLSASPSNLLQIPDVVVTHPTRTTNGNIRCRMVVKLSDNMRNVTTSMFFVRTRSSYGVQPLIVSRQQI----QNQVVRPFLDCCRVVSI 560

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
PPR90_ARATH	3.018e-57	27.70	Pentatricopeptide repeat-containing protein At1g62...	[more]
PPR99_ARATH	3.366e-57	27.12	Pentatricopeptide repeat-containing protein At1g63...	[more]
PPR36_ARATH	5.359e-57	27.59	Pentatricopeptide repeat-containing protein At1g12...	[more]
PPR94_ARATH	1.012e-56	26.76	Pentatricopeptide repeat-containing protein At1g62...	[more]
PP101_ARATH	2.042e-56	27.23	Pentatricopeptide repeat-containing protein At1g63...	[more]
PPR28_ARATH	8.251e-56	24.72	Pentatricopeptide repeat-containing protein At1g09...	[more]
PPR91_ARATH	1.058e-55	27.16	Pentatricopeptide repeat-containing protein At1g62...	[more]
PP103_ARATH	7.768e-55	28.07	Pentatricopeptide repeat-containing protein At1g64...	[more]
PPR37_ARATH	1.372e-54	26.42	Pentatricopeptide repeat-containing protein At1g12...	[more]
PP100_ARATH	1.546e-54	27.70	Pentatricopeptide repeat-containing protein At1g63...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0097431 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A067ED93_CITSI	1.560e-49	71.10	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
M5VTX9_PRUPE	0.000e+0	66.38	Uncharacterized protein OS=Prunus persica GN=PRUPE...	[more]
A0A068U574_COFCA	0.000e+0	65.28	Coffea canephora DH200=94 genomic scaffold, scaffo...	[more]
K7L4T2_SOYBN	0.000e+0	63.42	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
K7KRN3_SOYBN	0.000e+0	63.26	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
W9S972_9ROSA	0.000e+0	64.93	Uncharacterized protein OS=Morus notabilis GN=L484...	[more]
K7L4T4_SOYBN	0.000e+0	65.05	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A059CW34_EUCGR	0.000e+0	62.24	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
A0A0B2S4J5_GLYSO	0.000e+0	66.67	Pentatricopeptide repeat-containing protein (Fragm...	[more]
A0A0B2Q4W9_GLYSO	0.000e+0	66.49	Pentatricopeptide repeat-containing protein (Fragm...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 290..322 e-value: 1.7E-7 score: 28.9 coord: 184..217 e-value: 7.8E-5 score: 20.6 coord: 113..147 e-value: 8.6E-4 score: 17.3 coord: 395..428 e-value: 3.3E-5 score: 21.8 coord: 429..462 e-value: 4.0E-5 score: 21.5 coord: 254..288 e-value: 9.5E-6 score: 23.5 coord: 149..181 e-value: 2.5E-10 score: 37.9 coord: 359..393 e-value: 2.3E-6 score: 25.4 coord: 220..253 e-value: 1.5E-7 score: 29.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 216..264 e-value: 4.1E-12 score: 46.0 coord: 286..333 e-value: 1.0E-9 score: 38.3 coord: 145..192 e-value: 3.2E-16 score: 59.1 coord: 426..473 e-value: 3.2E-13 score: 49.5 coord: 356..404 e-value: 1.0E-11 score: 44.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 81..121 e-value: 0.0071 score: 16.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 111..145 score: 9.657
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 252..286 score: 10.918
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 181..215 score: 9.788
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 322..356 score: 8.353
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 11.915
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 427..461 score: 11.367
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 146..180 score: 14.129
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 287..321 score: 11.97
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 217..251 score: 11.575
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 76..110 score: 8.024
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 462..496 score: 10.008
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..426 score: 11.093
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 77..275 e-value: 8.3E-9 score: 33.9
None	No IPR available	PANTHER	PTHR24015:SF591	SUBFAMILY NOT NAMED	coord: 75..574
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 75..574
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 89..248

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0097431 ID=g.barbadense_cottongen_reftransV1_0097431; Name=g.barbadense_cottongen_reftransV1_0097431; organism=Gossypium barbadense; type=contig; length=2627bp
ACACACACACACATATATATATAGGAACCAAGCATGGGTATTGAGCTATC
AATCAAGAAAAACAAGGTATGGGTATTGAGCTATTAAAATAAAACTGTGT
TACTTTCACAGACATATTAACAGTAGCCTATGTTCTGGTCTGGCCTGTCT
GATACAAACAATGTGTACATAACACTGTAGGCAGCCACATTGAGTTACCT
CCACAAAAGGATTATATAATCAATGATCCAAAAAATATAAAGTATGTGTT
GAAGAACACGTTTGATATCTACAGCTTTTGAGTCATCAGCTTTTGTGAAA
TCAGAACTCCACGGTGCCGGAAAATTCAGGATACACATATGATATCCGGA
CAACCTTCCTGAAATTCTCATCAGTTTATGAACACCAATTTACATGAATT
TACAAACTGCCCATGCATCCTATATTCCCTGGTTGTTGTTAACTGCTTCT
GGCATATAATCCCTGGTTGCACCCCAAAAACACTTGCTTGAGCAGGAAAC
AGAGATGATGAATCGTATTTCTTCAACACCATTTGGCTTCTTGCTTTGGA
ACTAGATGATCCATTTTGTTCATTCATGGCTACCCCAGGCATCTGCAAAA
CATTAGAATAAGAAGCACTTAGGCTTTGTTTCTTGTACGTCTTCTCCATG
CCCTCTGCCGGTATGTCATCTTTAGTATTCGATGCAATTCCTCGATCTAC
ATTTTTTATGATTCTTCTTGCTTCATTTAGTAAACCGATGGCACGCCAAG
CATCCGCTACTAGCTGTATGGTGCTCCTCTCAGCAGAGATACCCTTCTCT
TCCATAATCTGCAGGAGTTCTTCAGCTTTCCATGGCTGTTTTGCTTCCCC
ATATCCCCATATCAGTGTCTCATAAGTAGCCAAATTGGGGGTAACGCCGA
TTTCACACATTTTCTCATAAACTCTGGCTGCATGATTCATTTTTCCAGCA
GTGCACCACCCACTAATGACAGTTGTGAAGATTACAACATTTGGTTGCAC
ACCGAATTTGCCCATGGAGTTGAGGAGTGACTCAGCCTCTCCTGGCTCCC
CAGCACGAATATAACCTTTCGCCAGGATGCTAAATGCGTGGACATCAGGT
TCTATACCAGCCTTTACCATATCATCAAAGATCTCCTGGCATTTGTCCAT
CAGCCCTGCTGAGCTCCAGGCATTCATAATCGTACTAAATGTTATAACAT
CTGGTTTGACCCCGAATTCTTCCATCAGTGTTAGTGCCTCATCAACTCCG
TTTGTATCTGTAACATCTAGAAAACCTTTTACCAGAGAGTTGAAAACAAC
AAGATTTGGTTGAACTCCTAGCTCCTTCATCCTGTACACAAACCTCAAAG
CTTCTGTCATATTACCTTCTTTACAATATCCGGTCACAATGATACCGCAA
GTACGCACATTGGGAGCCACTTTGTTGTTTTGCATCTCAAATATCATCTG
TTCTGCCCTATAAGTCTCCCCGGTCTGAGCATAGGCTCTTGCTATTGTAT
TGTAAGTGACAACATCAGGATGCATACCAGATGCTACCATTCTATGCACC
ACATTCCATGCTTCTTCTATGTTCAGTTTGTTGCACCATGCTCTAATTAG
AATGTTGTATGTTCTATCATTTGGTTGGACATTTCCATCCTGCAACATTA
ACTCTAGTAATTTTGAAGACTCTTCAGCCTTTCCAATATTTCCATATCCT
TTCATAAGGGTATTAAAAGTACTGGTTGTAGGCTTACATCCACTCTTCTT
CATTTTCTGAAAGATTTTCATTGCTTCTTTCACATTTCCAGACTCTGAAA
AGGCATTGATCATAGCATTGAAGAGAATAGAATCAGGCTTCATGCCATTC
TCTTCCACTTTGGAGATAAGTGAAATAATGGACTTGTAACGTTTCAGGCG
GGTTAATGCAGACACAAGAGCCGTGTAGGTCACAAGAGTTGGTTTATGTC
CTTCTTCTGTTAAGCTGTTGAAAATAAATTGAGCTTCTTGAGGCTTCCCC
TTCTCAATCAAAATGTTCATTAGTTTTGTTCTTGCACGAACAGTCTGGCA
ACTGTTGTTTCCTGAGCAAACAATGCATTTGGAGCTAACTTCAGAATCTG
CAGAACCTGTACCTGGATGTGATTGTTCCTTCTCATCAACATGTGATACC
ACAACTGCTGAAGCTTTGACTGGCTTCTTGCTCATGATTGTTCCCTCCTG
ATGCTTACCCATGGCAATGGACCTCCTGTTGGTCACACTGTCCAATGTTT
CTTCTCCGCTTTTCACCATCTAATAAACCAGACTTGACTTTTTTTCAGAT
TGGAGATGATCATTTCCAGGCCATATGGAACTTGTTTTCTGACTCAATTT
CCTCTGCTTGAAGGTTAAGCCTGAAGAACCTATCCATGCATCATCACAAG
CAAAGTTCAATAAGCAAAACCAGACCCTGGGACTAAAATCAAATCCTCTA
TAGAATTCGATGAAAGAGAAAAGGGGTTTGGTATTGCATGGTTAAGAGTA
GAGAGATTTGAGAGTGTGTAAACATGCAGGCAGCCGAATAAAGTTGAAAT
AGGGAAGAAGTGTGTTGGAGTGTAGTGGGTAGTGGGGAGTGGGTGAGTGG
TGCTTGTGTTTTAGACGTCCAACAGAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_rpt
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

g.barbadense_cottongen_reftransV1_0097431, g.barbadense_cottongen_reftransV1_0097431 (contig) Gossypium barbadense

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