g.barbadense_cottongen_reftransV1_0097430, g.barbadense_cottongen_reftransV1_0097430 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: Y005_SYNY3 (Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.025e-72 Identity = 149/442 (33.71%), Postives = 241/442 (54.52%), Query Frame = -3 Query: 2490 LPEA--YDAEEVADYFSHRPHVVAFRLLEVFSSFASAAIRIRMAGLKKSLRPGSSKDIDENLSQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILR-LGLGLLQKIAKRKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEGKSL 3806 PE+ Y + + +++ RP V RL+ + + I L+ D +S+ + L+E + +LGPT+IKVGQ+LSTRPD++ P L+ L DQ+P FP +A + IEEEL +P ++ +S EP+AAAS GQVY+G G VAVKVQRP+L + D+YI+R L L + + + +SD DEL + E++Y EA N +F + + VP ++ T +R LTMEW+ G K ++ Q +DA LV GV+ SL QLLE G HADPHPGNL A GR+ +LDFG++ ++ ++ ++ ++VH+VN D+ SL + ++D ++P T+++ + L G L + ++ F + ++ ++ ++ FR+P YY L++RS+ +LEG ++ Sbjct: 47 FPESWEYHPDLIMEFYRKRPLQVLGRLINILFPLLRFILGIWWEKLRGK---------DPTVSRAK-AIQLRELLTNLGPTYIKVGQALSTRPDLVPPVFLDELTTLQDQLPSFPNEVAYRFIEEELGAPAEEIYAELSPEPIAAASLGQVYKGKLKTGEAVAVKVQRPDLVRRITLDIYIMRSLSLWARRSVKRLRSDLVAITDELASRVFEEMNYYQEAINGEKFAQLYGSLPEIYVPSIYWQYTGRRVLTMEWVEG-------------IKLTNIKAIQAQGIDATH----LVEVGVQCSLRQLLEHGFFHADPHPGNLLAMADGRLAYLDFGMMSTIQPYQRYGLIEAVVHLVNRDFDSLAKDYVKLDFLKPDTDLKPIIPALGQVFGNA-LGASVAELNFKSITDQMSAMMYEFPFRVPAYYALIIRSMVTLEGIAI 460
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: Y1919_SYNY3 (Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1919 PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 1.620e-68 Identity = 154/460 (33.48%), Postives = 236/460 (51.30%), Query Frame = -3 Query: 2484 KPLPEA--------YDAEEVADYFSHRPHVVAFRLLEV---FSSFASAAIRIRMAGLKKSLRPGSSKDIDENLSQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAK-----RKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAK-RRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEGKSLCF 3812 KPLP Y+A+ +A+Y+ RP V +R LEV F F + + + G + + ++D L+E + LGPTFIKVGQ+LSTRPD++ + + L +L DQ+PPF LA +++EE+L + + IS PVAAAS GQVYR G +VAVKVQRPNLR + D+Y++RLG QK + D L DE G L E+DY E NA +F + + ++VP ++ + ++ LT+EW+ G K + K+ A D++ GV + L QLLE G HADPHPGNL T GR+ ++DFG++ ++E + + +SIV ++N D+ +L + + + P T+I + LE+ G + + D F + + Y FR+P + L++RSL + EG +L Sbjct: 5 KPLPPQSELDNIRRYNAQAIANYYRRRPWKVLWRALEVVWSFGFFLTCLLWDQWTGQVEYYKRQRAED-------------LRELLTKLGPTFIKVGQALSTRPDLVRRDFLEELIKLQDQLPPFDNDLAFQLMEEQLGMKVDEAYREISAHPVAAASLGQVYRAMLFSGEEVAVKVQRPNLRPRLSLDLYLMRLG---AQKFGRFLPLNLGHDLTLIVDEFGIKLFEEIDYLNEGRNAEKFAENFHGDAEVKVPCIYWQYSNQKVLTLEWI------------------QGFKLTDTDKIRAAGLDPSDIIRIGVTSGLRQLLEHGFFHADPHPGNLFATLDGRMAYIDFGMMDQLEPGTKETIASSIVQLINKDYLALTEDFIALGFLAPNTDITPIIPALENVFGSA-IGQSVQDFNFKTITDDFSELMYDYPFRVPAKFALIIRSLVTQEGLALSL 429
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: Y1796_ARATH (Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.937e-66 Identity = 147/439 (33.49%), Postives = 237/439 (53.99%), Query Frame = -3 Query: 2490 YDAEEVADYFSHRPHVVAFRLLEVFSSFASAAIRIRMAGLKKSLRPGSSKDIDENLSQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRG-CTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLL--QKIAKRKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKR-RLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEGKSL 3794 Y E +A +P R LE+ + A+++ G+ + ++++N+ + + L+ LGPTF+K+GQ LSTRPD+ P+ + L+EL D +P FP A IE ELD + + FS +S EP+AAAS GQVY+ G VAVKVQRP + + D Y++R G+G L + + +D DE + EL+Y EA NA +F ++ + + VP +F T ++ LTMEW+ G+K E+ ++++ ++LDLVN G++ SL QLLE G HADPHPGNL T G++ FLDFG++ ++ +FA++ +VH+VN D+ ++ + + + P ++ + L D + L + ++ F ++ + +V +Y F +PPYY L+LRSL LEG +L Sbjct: 96 YSPELIARKHGSQPFKALRRSLEILGALGGFALKL---GIDQK-----QGNLEKNMKKR--AIELRRIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIERELDLSLETIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIR-GVGKLINKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDYTSRKVLTMEWV------------------EGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLLATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDVTPIIPALRDFFDDA-LNYTVSELNFKTLVDGLGAVFYQYPFNVPPYYALILRSLTVLEGLAL 504
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: Y4139_ARATH (Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.721e-64 Identity = 134/377 (35.54%), Postives = 204/377 (54.11%), Query Frame = -3 Query: 2484 LKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCT-LDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAKRK--SDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKV-DAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEGKSLCF 3602 L+ + +LGP+FIK GQ L+ RPDII + L L D +PPFP +A IIEEEL P+ + FS IS + +AAAS GQVYR G DVA+KVQRP + ++ RD+++ R L + +K + L DE G+ L+ ELDYTLEA N FL+ +++P V+++L R L MEW+ G + + Q + DA L + GV A+L QLLE G+ H DPHPGN+ GRI ++DFG + + ++++ ++ ++VH VN D+ + T + + T++ + LE A+ + G+ D F V G+ + + R+P ++LV+RSL + EG +CF Sbjct: 170 LRNLLCNLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNEVAFNIIEEELGQPLENIFSKISSQTIAAASLGQVYRATLRATGEDVAIKVQRPQIEPIIYRDLFLFRTLASFLNGFSLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPGVYKNLCGPRVLVMEWI------------------DGIRCTDPQAIKDAGIDLNGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMQDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEMANDFTRLGFLAKDTDVSPIVPALE-AIWQNSAGKGLADFNFRSVTGQFNKLVYDFPIRIPERFSLVIRSLLTQEG--ICF 525
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: Y1181_ARATH (Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.151e-62 Identity = 135/372 (36.29%), Postives = 197/372 (52.96%), Query Frame = -3 Query: 2490 LKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRG-CTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAKRKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEGKSL 3602 L++ ++ LGP ++K+ Q++S+RPD+I P LS L DQI PF +A +IE+EL PI FS IS EPVAAAS GQVY+ G VAVKVQRP +R + D ILR GL++K + SD DE L E+DY EA N +F + + VPK++ + + L MEW+ G QK++ L LV GV S QLLE G HADPHPGN T G++ +LDFG++ + + + + +H+VN D+ +L + + ++ P VT L D + + G+ +I F +LG + ++ FR+PPY++LV+RSLA LEG ++ Sbjct: 123 LRKLLVELGPAYVKIAQAVSSRPDLIPPIYLDELSLLQDQITPFSTEVAFNMIEDELGLPIDELFSEISPEPVAAASLGQVYQARLRRSGKVVAVKVQRPGVRAAIALDTLILRYIAGLIKKAGRFNSDLEAVVDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLVPKMYTEYSTSKVLVMEWVEG------------------------QKLNEVNDLY-LVEVGVYCSFNQLLEYGFYHADPHPGNFLRTYDGQLAYLDFGMMGDFRPELRDGFMEACLHLVNRDFKALAKDFVTLGLLPPTAEKSAVTKALTDVFQDA-ISRGVRNISFGDLLGDLGKTMYRFKFRIPPYFSLVIRSLAVLEGIAI 468
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: Y095_SYNY3 (Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0095 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 6.174e-48 Identity = 125/387 (32.30%), Postives = 200/387 (51.68%), Query Frame = -3 Query: 2499 QYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGL-------LQKIAKRKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLV-NKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTN---IRRVTMDLEDALGEVELKDGIPDIK-FSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEG 3623 +Y L + +L LGPTFIK+GQSLSTR DII E +A ++L D++PPF A+ +IE+EL I F P+A+AS GQV+R G V VKVQRP L ++ D +L L L +++A++ +Y E L E+DY E NA +F + + ++VP+++ T + LT+E++ G K +RQ ++ LDLV G+ A L QLL G +DPHPGN+ + G + F DFG + ++ + M+ + ++ D + +L+AL M +V P + I+R+ L D +D DIK F +V +++++ + FR+PP T +L+S+++L+G Sbjct: 54 RYRRAQWLVQQLLYLGPTFIKIGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQAIAVIEQELHGAIDEIFQQFEVTPLASASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLDFELLHQTLRLAKRWLPGFRRLAQKYEIEAIY-QEFFSLLFLEIDYIHEGKNAERFRQNFADYPRVRVPEIYWQYTTRMVLTLEYLP------------------GIKVDDRQALETAGINLDLVIQTGICAYLKQLLVDGFFQSDPHPGNMAVDSQGDLIFYDFGTMAEVKIIAKDQMVQTFFAVLRKDTNQVLEALIYMGLVEPKGDLSPIKRIINFLLD-----NFRDKPIDIKAFDQVGEEVYAMFQQQPFRLPPQMTFILKSISTLDG 416
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: UBIB_NEIMB (Probable protein kinase UbiB OS=Neisseria meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.226e-44 Identity = 131/413 (31.72%), Postives = 197/413 (47.70%), Query Frame = -3 Query: 2499 RIRMAGLKKSLR------------PGSSKDIDENLSQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAK--RKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEG 3695 R R+AGL SL P SSK L + L+ + SLGP FIK GQ LSTRPD+I + + L++L D++PPF L+ + IE+ L I ++ EP+A+AS QV++ G VAVKV RPNL V+ +D+ ++R G G ++++ ++ PR E K L ELD EAANASQ + + VPKVF LT+EWM G +D+ L+ +D L L + GVE TQ+ G HAD HPGN+ A R LDFG++ + + + + + N D+ + A E V T + + A+ E I I F VL +++ V+ +++ + P L+ ++L ++EG Sbjct: 16 RYRLAGLCASLMGSGWICALLKMMPQSSK-----LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGEQVAVKVLRPNLLPVIEQDLSLMRFGAGWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYDYCTSDVLTIEWMDGTPVSDIAK-------------LKADGID----LHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGWVPADTRAEELEAAVR-AVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEG 405
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: Y1770_SYNY3 (Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.126e-42 Identity = 116/374 (31.02%), Postives = 180/374 (48.13%), Query Frame = -3 Query: 2499 LKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAK--RKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYT-ASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTN---IRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEG 3602 ++E +LSLGPTFIKVGQ STR D+ E + LS+L D++P F A IIEEEL PI + P+AAAS GQV++ G DV VKVQRP L+ + D+ IL+ Q K R D +E K L E DY E +A F +++VP+V+ T + LT+E++ G S Y + +R+ +L G A L QLL G HADPHPGNL + +G + F DFG++ + + ++ ++ + + ++ +L + ++ + IRR L D + + +++ ++ +A FR P +T V+R+ ++LEG Sbjct: 88 IRENLLSLGPTFIKVGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEELGKPIAKLYRSFDPVPLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKKIAQYFQNHPKWGRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRGEDWVKVPRVYWRYTSTQILTLEYLPGIKI---------------SHYDALEAAGLERK--ELAQLGARAYLFQLLNHGFFHADPHPGNLAVSPEAGELIFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVALGALKETEDMGPIRRSVQFLLDNF----MDKPFEEQSITKISDDLYEIAYDQPFRFPATFTFVMRAFSTLEG 440
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: UBIB_NEIMA (Probable protein kinase UbiB OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=ubiB PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 7.316e-42 Identity = 128/413 (30.99%), Postives = 194/413 (46.97%), Query Frame = -3 Query: 2499 RIRMAGLKKSLR------------PGSSKDIDENLSQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAK--RKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEG 3695 R R+AGL SL P SSK L + L+ + SLGP FIK GQ LSTRPD+I + + L++L D++PPF L+ + IE+ L I ++ EP+A+AS QV++ G VAVKV RPNL ++ +D+ ++R G ++++ R+ P E K L ELD EAANA Q + + + VPKVF LT+EWM G D+ L+ +D L L + GVE TQ+ G HAD HPGN+ A R LDFG++ + + + + + N D+ + A E V T + + A+ E I I F VL +++ V+ +++ + P L+ ++L ++EG Sbjct: 16 RYRLAGLCASLMGSGWICALLKMMPQSSK-----LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQDLSLMRFGAAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFHNSNMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAK-------------LKADGID----LHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGWVPADTRAEELEAAVR-AVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEG 405
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Match: Y889_SYNY3 (Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0889 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.262e-40 Identity = 111/375 (29.60%), Postives = 181/375 (48.27%), Query Frame = -3 Query: 2499 VLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIA-KRKSDPRLYADELGKGLVGELDYTLEAA---NASQFLDAHSHFSFMQ--VPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEG 3605 VL + ++ LGP +IK+GQ LSTRPD++ P AL+ L +PP P +++ E P+G F I EP+AA S GQ++R G VA+KV+RP + +V +D +++ LL + D ADE + + EL++ EAA N L + F Q +PKV+ LT ++ L +EW+ G S ++ + K+ + L+ + A QL G HADPHPGN+ Y A GR+ +D G++ R++ + + + ++ IV+ D Q E+ N +R+ +D E L + + + FS V+ + +A ++P L + LA+LEG Sbjct: 45 VLTKILVELGPFYIKLGQLLSTRPDLLPPRYINALTALQSNVPPLPWSAIEDLLQREFPQPLGETFQEIESEPIAAGSIGQIHRAVLQSGETVAIKVKRPGIDVIVEQDSLLIKDVAELLALTEFGQNYDIVKLADEFTQTVKAELNFDTEAAYTNNLRTNLAKTTWFDPNQLVIPKVYWELTNQKFLVLEWLDGVPILTADLTQPPS---------DKDIAEKKKEITTLLFR---AFFQQLYVDGFFHADPHPGNIFYLADGRLALIDCGMVGRLDPRTRQLLTEMLLAIVDLDAKRCAQLTVELSESVGRVNFQRLEVDYERMLRKY-YDLSLSEFNFSEVVYEFLRIARVNKLKVPACLGLYAKCLANLEG 406
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy TrEMBL
Match: A0A059BHP1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02820 PE=4 SV=1) HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0 Identity = 391/539 (72.54%), Postives = 454/539 (84.23%), Query Frame = -3 Query: 2499 FANFSHFGDVVRRDMDFLKKGVQRGVEWANETFRIPQAKKAVDDVVWLRNLEDPNFSXXXXXXXXXXXXXXXLSGMDLMMADLKALEAYVSYFYYQSKKWSKPLPEAYDAEEVADYFSHRPHVVAFRLLEVFSSFASAAIRIRMAGLKKSLRPGSSKDIDENLSQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAKRKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEG 4115 F +FSHF D V++D FL+K + RG+EWANE RIP K +DDVVWLR LE+P+ +PP + WP+PCYP LSG+DL+MADL+ALEAY++YFY S+ WS+PLPE Y+ E+V YFS RPHVVA RLLEVF SFASA ++IR +G+ LR S KD D N+SQYNFG+ LKETML+LGPTFIKVGQSLSTRPDIIG EISKALSELHDQIPPFPR +AM+ I+EE SP S FS+ISE+PVAAASFGQVYRG TLDG DVA+KVQRPNLRHVVVRD+YILRL LGL+QKIAKRKSD RLYADELGKGLVGELDYTLEA+NA++F + HSHF+FM+VPKV +HL+RKR LTMEWM GES TDLL ++TS+++ G Y E Q DAKRRLLDLV+KGVE++L QLLETG+LHADPHPGNLRYT++G+IGFLDFGLLC+ME++HQ AMLASIVHIVNGDW+SL+QALTEMDVVRPGTN+ RVTMDLEDALGEVE DGIPD+KFSR YHFRMPPYYTLVLRSLAS EG Sbjct: 47 FGDFSHFADAVKKDASFLRKRIGRGIEWANEALRIPLVAKTLDDVVWLRVLENPD-APPVEDCPWPRPCYPELSGLDLVMADLRALEAYMAYFYCLSRVWSRPLPEVYNVEDVNYYFSCRPHVVALRLLEVFFSFASATVKIRASGIASYLRLNSDKDNDGNISQYNFGLALKETMLNLGPTFIKVGQSLSTRPDIIGSEISKALSELHDQIPPFPRTVAMQTIKEEFGSPAQSIFSHISEDPVAAASFGQVYRGKTLDGLDVAIKVQRPNLRHVVVRDIYILRLALGLVQKIAKRKSDLRLYADELGKGLVGELDYTLEASNAAEFSETHSHFTFMRVPKVLEHLSRKRVLTMEWMVGESPTDLLEVSTSNAMVGGCAYSEEQIFDAKRRLLDLVSKGVESTLVQLLETGLLHADPHPGNLRYTSTGQIGFLDFGLLCQMERRHQLAMLASIVHIVNGDWASLIQALTEMDVVRPGTNLWRVTMDLEDALGEVEFTDGIPDVKFSR-----------YHFRMPPYYTLVLRSLASFEG 573 HSP 2 Score: 261.922 bits (668), Expect = 2.586e-69 Identity = 132/222 (59.46%), Postives = 166/222 (74.77%), Query Frame = -1 Query: 470 VVLNRKKEFRWERLALFMRVGATRRSLQLVEASSGETSLDNLPSRTDGVFDVAYLLLRLLPSKDGVVLRRLIMTADGASLVRAAVSKEAKAFRFQLCKIIADILYQRMVKALGQLVPASQYSYKLRLAGGHQNTELHPSTRLSTSSTVYDYQSLLSDRRLKLILSKILNSARKEPALMLRFYWVSFVTFIAASALAFHRLLISLSAAYIGPASFIPKRFAIS 1135 VV +KKEFRWERL+LF++VG TR+S+Q A + + SLD +P+R FDVA L+LRLLPSK GVVLRRL+MTADGASL+RA VSKE FR QLC IIA+ILY M+ A+G +QY+ +++LA G N EL PS+ STS +YDYQS+ DRRL++I SK L SA+ +P LMLRF W S V F+ ASALA HR +++LS AY+GP SF+PKRFAIS Sbjct: 611 VVFTKKKEFRWERLSLFLKVGVTRKSMQGSRALNDDASLDIIPNRNTSAFDVANLVLRLLPSKQGVVLRRLLMTADGASLIRAMVSKEGGFFRQQLCGIIAEILYHWMLGAIGSSTRVAQYNSRVKLASGTSNYELGPSSGRSTS--IYDYQSIFRDRRLRVIFSKALRSAQSDPVLMLRFCWSSLVIFVTASALACHRAVVNLSEAYLGPLSFVPKRFAIS 830 HSP 3 Score: 70.4774 bits (171), Expect = 8.298e-9 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = -2 Query: 1642 GLAVAADPSFKTFEAAYPFVVRKLLTENSAETRKILH 1752 GLAVAADP+FKTF+AAYP+VVRKLLTEN+A TRKILH Sbjct: 573 GLAVAADPNFKTFQAAYPYVVRKLLTENTAATRKILH 609
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy TrEMBL
Match: A0A0B2Q796_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_011599 PE=4 SV=1) HSP 1 Score: 728.013 bits (1878), Expect = 0.000e+0 Identity = 354/464 (76.29%), Postives = 408/464 (87.93%), Query Frame = -3 Query: 2487 MADLKALEAYVSYFYYQSKKWSKPLPEAYDAEEVADYFSHRPHVVAFRLLEVFSSFASAAIRIRMAGLKKSLRPGSSKDIDENLSQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAKRKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEGKSLC 3878 M+DLKA EAY SYFYY SK W++PLP+ YD ++VA YFS RPH+V R+LEV SFA+A I IR +G K LR +D+D+ SQYNFGMVLKET+L+LGPTFIKVGQSLSTRPDIIG E+SKALSELHDQIPPFPR +AMKI+EEE P+ SFFSYISEEP+AAASFGQVY T DG++VAVKVQRPNL HVVVRD+YILRLGLGLLQKIAKRKSDPRLYADELGKG VGELDYTLEAANAS+FL+ HS F+FM VPKVF HLTRKR LTMEWM GES TDLLS+T +S+ + S+Y ERQK+DAKR LLDLV+KG+E++L QLLETG+LHADPHPGNLRYT+SG+IGFLDFGLLC+MEK+HQFAMLASI+HIVNGDW+SL++AL +MDVVRPGTNIR VT++LE ALGEVE K+GIPD+KFSRVLGKIW+VALK+HFRMPPYYTLVLRSLASLEG ++ Sbjct: 1 MSDLKAFEAYASYFYYFSKLWTRPLPQDYDPQQVAQYFSVRPHLVTLRVLEVLFSFATAMISIRTSGFSKFLRLIPEEDVDDTSSQYNFGMVLKETLLNLGPTFIKVGQSLSTRPDIIGVEMSKALSELHDQIPPFPRTVAMKIMEEEFGCPLESFFSYISEEPIAAASFGQVYFARTTDGNNVAVKVQRPNLHHVVVRDIYILRLGLGLLQKIAKRKSDPRLYADELGKGFVGELDYTLEAANASKFLEVHSSFTFMNVPKVFPHLTRKRVLTMEWMVGESPTDLLSVTAGNSVGNVSEYSERQKLDAKRCLLDLVSKGIESTLVQLLETGLLHADPHPGNLRYTSSGQIGFLDFGLLCQMEKRHQFAMLASIIHIVNGDWASLVRALVDMDVVRPGTNIRLVTLELEQALGEVEFKEGIPDVKFSRVLGKIWTVALKHHFRMPPYYTLVLRSLASLEGLAIA 464 HSP 2 Score: 231.491 bits (589), Expect = 6.504e-60 Identity = 124/225 (55.11%), Postives = 163/225 (72.44%), Query Frame = -1 Query: 467 VVLNRKKEFRWERLALFMRVGATRRSLQLVEASSGETSLDNLPSRTDGVFDVAYLLLRLLPSKDGVVLRRLIMTADGASLVRAAVSKEAKAFRFQLCKIIADILYQRMVKALGQLVPASQYSYKLRLAGGHQNTE--LHPSTRLSTSSTVYDYQSLLSDRRLKLILSKILNSARKEPALMLRFYWVSFVTFIAASALAFHRLLISLSAAYIGPASFIPKRFAISA 1135 V+LN++KEF+W+RL+LF+RVGATR++L+LV AS+ ETSLD+ S+ D+AYL+LRLLPSKDGV +RRL+MTADGASL++A VSKE + FR QLCKII ILYQ M+K GQ + +QYS ++ LA G + E L P + L T YDY S+ DRRL++I SK+L SA ++ LMLRF W S I AS LA H+L++SLS AY+ PKR+A+SA Sbjct: 498 VLLNQRKEFQWQRLSLFLRVGATRKALRLV-ASNSETSLDHSTSKATDTIDIAYLVLRLLPSKDGVAIRRLLMTADGASLIKAMVSKEGEFFREQLCKIIVGILYQWMIKLFGQGITITQYS-RMVLANGPSSKESGLSPRSSLPT----YDYNSIFRDRRLRVIFSKVLKSASRDKILMLRFSWASLKIIITASTLACHQLVVSLSEAYLSKIFDAPKRYAVSA 716 HSP 3 Score: 67.0106 bits (162), Expect = 1.092e-7 Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = -2 Query: 1642 GLAVAADPSFKTFEAAYPFVVRKLLTENSAETRKILH 1752 GLA+AAD +FKTFEAAYP+VVRKLLTENSA TR ILH Sbjct: 460 GLAIAADTNFKTFEAAYPYVVRKLLTENSAATRNILH 496
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy TrEMBL
Match: R0FUK9_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10022647mg PE=4 SV=1) HSP 1 Score: 726.857 bits (1875), Expect = 0.000e+0 Identity = 364/538 (67.66%), Postives = 436/538 (81.04%), Query Frame = -3 Query: 2499 FSHFGDVVRRDMDFLKKGVQRGVEWANETFRIPQAKKAVDDVVWLRNLEDPNFSXXXXXXXXXXXXXXXLSGMDLMMADLKALEAYVSYFYYQSKKWSKPLPEAYDAEEVADYFSHRPHVVAFRLLEVFSSFASAAIRIRMAGLKKSLRPGSSKDIDENL--SQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAKRKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEG 4106 HF DVVR D+D+LK + G+ WANE FR+P+ K+ +++ WLR+LED + S + WPQP Y LSG+DL MAD+KALEAY YFY SK WS+PLPE YD++ VADYF+ RPHVVAFRLLEVFS+F AAIR+R S+ D +NL S+ NFGMVLKETML LGPTFIKVGQSLSTRPDIIG E SKALSELHD+IPPFP P A+KIIEEEL +P+ SFFS+ S+E VAAASFGQVYRG TLDG DVAVKVQRP+LRH V+RD+YILRLGLG+L+KIAKR++D R+YADELGKGL GELD+TLEAANAS+F +AHS FS+++VPKV+QHLTRKR LTMEWM GE S L +SS H + E++K++A+RRLLDLVNKG+EA+L QLL+TG+LHADPHPGNLRYT S +IGFLDFGL+CRM++KHQ AMLA+IVHIVNGDW+ L++AL +MDV+ PG N RR T+DLE ALGEVELK+GIPDI+F++VL KI VALKY RMPPY+TLVLRSLA LEG Sbjct: 46 LGHFADVVRNDVDYLKNKIGVGLRWANEAFRVPEVTKSAEELFWLRHLEDHHASKNVEKQAWPQPSYSGLSGVDLFMADVKALEAYAGYFYCLSKMWSRPLPEVYDSQAVADYFNCRPHVVAFRLLEVFSAFMIAAIRLR----------SSASDKGKNLEASEQNFGMVLKETMLRLGPTFIKVGQSLSTRPDIIGTETSKALSELHDRIPPFPWPEAVKIIEEELGAPVESFFSHFSQETVAAASFGQVYRGKTLDGLDVAVKVQRPDLRHAVLRDIYILRLGLGVLRKIAKRENDIRVYADELGKGLAGELDFTLEAANASEFREAHSRFSYIRVPKVYQHLTRKRVLTMEWMVGE-SPTDLLSISSSYSDHDLQSHEKEKIEARRRLLDLVNKGIEATLVQLLDTGILHADPHPGNLRYTTSRQIGFLDFGLVCRMQRKHQLAMLAAIVHIVNGDWALLVEALIDMDVITPGINTRRFTLDLEYALGEVELKNGIPDIEFTKVLSKIVKVALKYQLRMPPYFTLVLRSLACLEG 572 HSP 2 Score: 151.369 bits (381), Expect = 7.422e-34 Identity = 92/212 (43.40%), Postives = 129/212 (60.85%), Query Frame = -1 Query: 506 VLNRKKEFRWERLALFMRVGAT---RRSLQLVEASSGETSLDNLPSRTDGVFDVAYLLLRLLPSKDGVVLRRLIMTADGASLVRAAVSKEAKAFRFQLCKIIADILYQRMVKALGQLVPASQYSYKLRLAGGHQNTELHPSTRLSTSSTVYDYQSLLSDRRLKLILSKILNSARKEPALMLRFYWVSFVTFIAASALAFHRLLISLSAAYIG 1132 VLNRKKEFRWER+ALF+ +T R+ LV S TS+D+ + D D L+LRLL SK+GVVLRRL+M A+G SL++ +S+EA R +LC IA+ +YQ MV LG + + ++ + L P + + TV D + L+SD+R+++IL KIL SA+ + LMLRF W SF + +ALA HR +IS+S YI Sbjct: 611 VLNRKKEFRWERVALFLSKSSTSFSRKQSPLVTLSRDRTSVDSSSNLKDKDADNVSLVLRLLASKNGVVLRRLLMAANGTSLIQTFISREAHVIRQKLCTTIANTMYQWMVGILG--IESLKF---ISLPD--------PPSSSGLNITVKDLKILISDKRVRVILRKILESAKSDRVLMLRFCWTSFAMSLTTTALACHRFVISVSEGYIN 809
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy TrEMBL
Match: A0A087H3W0_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G174700 PE=4 SV=1) HSP 1 Score: 723.391 bits (1866), Expect = 0.000e+0 Identity = 365/537 (67.97%), Postives = 437/537 (81.38%), Query Frame = -3 Query: 2499 FSHFGDVVRRDMDFLKKGVQRGVEWANETFRIPQAKKAVDDVVWLRNLEDPNFSXXXXXXXX-XXXXXXXLSGMDLMMADLKALEAYVSYFYYQSKKWSKPLPEAYDAEEVADYFSHRPHVVAFRLLEVFSSFASAAIRIRMAGLKKSLRPGSSKDIDENLSQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAKRKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEG 4106 HFG+VVR D++FLK + G++WANE FR+P+ K+ ++++WLR+LEDP S P +P PQP Y LSG+DL+MAD+KALEAY Y Y SK WS+PLPE YDA+EVADYF+ RPHVVAFRLLEVFS+F AAIR+R + K +SK I FGMVLKETML LGPTFIKVGQSLSTRPD+IG EISKALSELHD+IPPFP+ A+KIIEEEL +P+ SFFS S+E VAAASFGQVYRG TLDG DVAVKVQRP+LRH V+RD+YILRLGLG+L+KIAKR++D R+YADELGKGL GELD+TLEAANAS+F +AHS FS+++VPKV+QHLTRKR LTMEWM GE S L +S H + ERQK++A+R LLDLVNKGVEA+L QLL+TG+LHADPHPGNLRYT S +IGFLDFGL+CRM++KHQ AMLASIVHIVNGDW+SL+ ALT+MDV++PG N RR T+DLE ALGEVEL++GIPDI+F++VL KI VALKY +MPPY+TLVLRSLA EG Sbjct: 43 LGHFGEVVRNDVEFLKNKIGIGIKWANEAFRVPEVTKSAEELLWLRHLEDPVSSTPLEPKRSWPQPSYSGLSGVDLLMADVKALEAYAGYVYCLSKMWSRPLPEVYDAQEVADYFNCRPHVVAFRLLEVFSAFMVAAIRLRTSASDKRKTLEASKQI--------FGMVLKETMLHLGPTFIKVGQSLSTRPDLIGTEISKALSELHDRIPPFPQAEAVKIIEEELGAPVESFFSQFSQETVAAASFGQVYRGRTLDGLDVAVKVQRPDLRHAVLRDIYILRLGLGVLRKIAKRENDIRVYADELGKGLAGELDFTLEAANASEFREAHSQFSYIRVPKVYQHLTRKRVLTMEWMVGE-SPTDLLSVSSGDSDHDFQSHERQKLEARRSLLDLVNKGVEATLVQLLDTGILHADPHPGNLRYTTSRQIGFLDFGLVCRMQRKHQLAMLASIVHIVNGDWASLVDALTDMDVIKPGVNTRRFTLDLELALGEVELRNGIPDIEFTKVLSKIVKVALKYQLQMPPYFTLVLRSLACFEG 570 HSP 2 Score: 157.532 bits (397), Expect = 8.504e-36 Identity = 90/217 (41.47%), Postives = 132/217 (60.83%), Query Frame = -1 Query: 506 VLNRKKEFRWERLALFMRVGATR--------RSLQLVEASSGETSLDNLPSRTDGVFDVAYLLLRLLPSKDGVVLRRLIMTADGASLVRAAVSKEAKAFRFQLCKIIADILYQRMVKALGQLVPASQYSYKLRLAGGHQNTELHPSTRLSTSSTVYDYQSLLSDRRLKLILSKILNSARKEPALMLRFYWVSFVTFIAASALAFHRLLISLSAAYIG 1132 VLNRKKEFRWER+ LF+ +TR + LV ++ ETS DN ++T+ D ++LRLL SKDGVVLRRL+M A+ SL+R +S++A R +LC IAD +YQ MV G + + ++ + L+ P + T+ TV D++SL++D+R+++IL +I S + + LM +F W SFV F+ SALA HR +IS+S YI Sbjct: 609 VLNRKKEFRWERVGLFLSKSSTRTNNHWATKKHSPLVLSTRDETSGDNSSNQTNRDADTVGVVLRLLASKDGVVLRRLLMAANATSLIRTFISRDAHVIRQKLCTTIADTMYQWMVGIFG--IKSLKF---ISLS--------DPPSSSGTNITVKDFKSLIADKRVRVILRQIFESTKSDRVLMFKFGWTSFVMFLTTSALACHRFVISVSEGYIN 812 HSP 3 Score: 66.2402 bits (160), Expect = 1.776e-7 Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = -2 Query: 1642 GLAVAADPSFKTFEAAYPFVVRKLLTENSAETRKILH 1752 GLA DP+FKTFEAAYPFVV+KLL+ENSA TRKILH Sbjct: 570 GLAAVGDPNFKTFEAAYPFVVQKLLSENSAATRKILH 606
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy TrEMBL
Match: D7LCF7_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903159 PE=4 SV=1) HSP 1 Score: 718.768 bits (1854), Expect = 0.000e+0 Identity = 363/540 (67.22%), Postives = 437/540 (80.93%), Query Frame = -3 Query: 2484 SHFGDVVRRDMDFLKKGVQRGVEWANETFRIPQAKKAVDDVVWLRNLEDPNFSXXXXXXXXXXXXXXXLSGMDLMMADLKALEAYVSYFYYQSKKWSKPLPEAYDAEEVADYFSHRPHVVAFRLLEVFSSFASAAIRIRMAGLKKSLRPGSSKDIDENLSQYNFGMVLKETMLSLGPTFIKVGQSLSTRPDIIGPEISKALSELHDQIPPFPRPLAMKIIEEELDSPIGSFFSYISEEPVAAASFGQVYRGCTLDGSDVAVKVQRPNLRHVVVRDVYILRLGLGLLQKIAKRKSDPRLYADELGKGLVGELDYTLEAANASQFLDAHSHFSFMQVPKVFQHLTRKRALTMEWMAGEXXXXXXXXXXXXXIKHGSKYLERQKVDAKRRLLDLVNKGVEASLTQLLETGMLHADPHPGNLRYTASGRIGFLDFGLLCRMEKKHQFAMLASIVHIVNGDWSSLLQALTEMDVVRPGTNIRRVTMDLEDALGEVELKDGIPDIKFSRVLGKIWSVALKYHFRMPPYYTLVLRSLASLEGKSLCF 4103 SHF DVVR D+DFLK + G+ WANE FR+P+ K+ +++ WLR+LED + S + WPQP Y LSG+DL MAD+KALEAY +YFY SK WS+PLPE YD++ VADYF+ RPHVVAFRLLEVFS+F AAIR+R + KS K ++ S+ NFGMVLKETML LGPTFIKVGQSLSTRPDIIG EISKALSELHD+IPPFP P A+KIIEEEL P+ SFFS S+E VAAASFGQVYRG TLDGSDVAVKVQRP+LRH V+RD+YILRLGLG+L+K+AKR++D R+YADELG GL GELD+TLEAANA +F +AHS FS+++VPKV++HLTRKR LTMEWM GE S L +S H ++ E+QK++A+RRLLDLVNKGVEA+L QLL+TG+LHADPHPGNLRYT S +IGFLDFGL+CRM++KHQ AMLASIVHIVNGDW+ L+++LT+MDV+ PG N RR T+DLE ALGEV+L +GIPDI+F++VL KI VALKY RMPPY+TLVLRSLA LE + F Sbjct: 7 SHFADVVRNDVDFLKNKIGIGLWWANEAFRVPEVTKSAEELFWLRHLED-HASSSLESQSWPQPSYSGLSGVDLFMADVKALEAYAAYFYCLSKMWSRPLPEVYDSQAVADYFNCRPHVVAFRLLEVFSAFMVAAIRLRTSASDKS------KSLEA--SEQNFGMVLKETMLHLGPTFIKVGQSLSTRPDIIGTEISKALSELHDRIPPFPWPEAVKIIEEELGGPVESFFSQFSQETVAAASFGQVYRGRTLDGSDVAVKVQRPDLRHAVLRDIYILRLGLGVLRKVAKRENDIRVYADELGMGLAGELDFTLEAANALEFQEAHSRFSYIRVPKVYKHLTRKRVLTMEWMVGE-SPTDLLAISSGYSDHDNESHEKQKIEARRRLLDLVNKGVEATLVQLLDTGILHADPHPGNLRYTTSRQIGFLDFGLVCRMQRKHQLAMLASIVHIVNGDWAFLVESLTDMDVITPGVNTRRFTLDLEYALGEVKLINGIPDIEFTKVLSKIVKVALKYQLRMPPYFTLVLRSLACLEVICVLF 536 HSP 2 Score: 166.777 bits (421), Expect = 7.921e-39 Identity = 95/209 (45.45%), Postives = 133/209 (63.64%), Query Frame = -1 Query: 506 VLNRKKEFRWERLALFMRVGATRRSLQLVEASSGETSLDNLPSRTDGVFDVAYLLLRLLPSKDGVVLRRLIMTADGASLVRAAVSKEAKAFRFQLCKIIADILYQRMVKALGQLVPASQYSYKLRLAGGHQNTELHPSTRLSTSSTVYDYQSLLSDRRLKLILSKILNSARKEPALMLRFYWVSFVTFIAASALAFHRLLISLSAAYIG 1132 VLNRKKEFRWER+ALF+ +TR+ LV S ETS+D+ + TD D L+LRLL SK+GVVLRRL+M A+G SL+R +S+E R +LC IA+ +YQ MV +LG + + ++ + L+ P + TV D++ L+ D+R+++IL KIL SA+ + LMLRF W SFV F+ +ALA HR +IS+S YI Sbjct: 579 VLNRKKEFRWERVALFLSKSSTRKQSPLVTLSRDETSVDSSSNLTDKDADNVSLVLRLLASKNGVVLRRLLMAANGTSLIRTFLSREGHVIRQKLCMTIANTMYQWMVGSLG--IESLKF---ISLSD--------PPLSSGINITVKDFKILIRDKRVRVILRKILESAKSDQILMLRFCWTSFVMFLTTTALACHRFVISVSEGYIN 774 HSP 3 Score: 68.1662 bits (165), Expect = 4.408e-8 Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = -2 Query: 1642 GLAVAADPSFKTFEAAYPFVVRKLLTENSAETRKILH 1752 GLA A DP+FKTFEAAYPFVV+KL+TENSA TRKILH Sbjct: 540 GLAAAGDPNFKTFEAAYPFVVQKLITENSAATRKILH 576 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097430 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097430 ID=g.barbadense_cottongen_reftransV1_0097430; Name=g.barbadense_cottongen_reftransV1_0097430; organism=Gossypium barbadense; type=contig; length=4564bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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