g.barbadense_cottongen_reftransV1_0097352, g.barbadense_cottongen_reftransV1_0097352 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: V7BIT7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G156900g PE=4 SV=1) HSP 1 Score: 819.691 bits (2116), Expect = 0.000e+0 Identity = 402/498 (80.72%), Postives = 443/498 (88.96%), Query Frame = 2 Query: 866 LTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRKD-------DDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 L + SMENHHPSTLLSMDSSA H+E DL+ NRQ ILS PPDINLPLSAERSPPPQ PWNS+ CDILDVGL +Q YETES++ + KAGRKC KRVDSIWGAW FFSFYFKP+LN+KSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF RSHRMQRKHYRGLSNPQCVHGIE+V +PNL+ L E+DRK+WIELTGRDLNFTIP EASDFSSWRNLPNTDFELER P IKN P++H +KLLNGSGLNLS+ ++H+ GDG DLS VS+K+RKD ++C+L V PPSDRIPD+E+HPSEPHWLNDF+GV+KS YGPVTAAK IYEDE GYLIIISLPFVDL VKVSWRNTLTHGIIK+SC+STS PFIKRH+RTFKLTD + EHCPPGEFVREIPLSTRIPEDA+IEAY+DGPGSVLEI+VPK R+ PEEHE+RVCLRP GNDL LT Sbjct: 3 LASLSMENHHPSTLLSMDSSASSHEELDLEMNRQIILSRPPDINLPLSAERSPPPQ-PWNSEPCDILDVGLGTQGYETESFINLPKAGRKCAKRVDSIWGAWFFFSFYFKPSLNDKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFARSHRMQRKHYRGLSNPQCVHGIEVVSAPNLMTLDEDDRKRWIELTGRDLNFTIPPEASDFSSWRNLPNTDFELERPPPPIKNGPNAHPKKLLNGSGLNLSSHLSNHSNGDGLDLSPVSSKKRKDFFPHGNEEECYLAVNPPSDRIPDIEMHPSEPHWLNDFSGVIKSVYGPVTAAKTIYEDEQGYLIIISLPFVDLPSVKVSWRNTLTHGIIKVSCMSTSRKPFIKRHDRTFKLTDRSSEHCPPGEFVREIPLSTRIPEDANIEAYYDGPGSVLEILVPKHRVGPEEHEVRVCLRPHLGGNDLKLT 499
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A0B2PE41_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026501 PE=4 SV=1) HSP 1 Score: 819.691 bits (2116), Expect = 0.000e+0 Identity = 404/509 (79.37%), Postives = 444/509 (87.23%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSAS------HTYGDGTDLSLVSNKRRKD-------DDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG S LT+ SMENHHPSTLLSMDSSA H+E DL+ NRQ IL+ PPDINLPLSAERSPPPQ PWNS+ CDILDVGL +Q YETES+L + KAGRKC KRVDSIWGAW FFSFYFKPALN+KSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFS DKGF RSHRMQRKHYRGLSNPQCVHG+E+V +PNL+ L E+DRK+WIELTGRDLNFTIP EASDFSSWRNLPNTDFELER P IKN P++H +KLLNGSGLN S + S H+ GDG DLS VS+K+RKD ++C+L V PPSDRIPD+E+HP+EPHWLNDF+GV+KS YGPVTAAK IYEDE GYLIIISLPFVDL VKVSWRNTLTHGIIK+SC+STS P IKRH+RTFKLTDP+ EHCPPGEFVREIPLSTRIPEDA+IEAY+DGPGSVLEI+VPK R+ PEEHE+RVCLRP GNDL LT Sbjct: 1 MGDSCLTSLSMENHHPSTLLSMDSSASSHEELDLEMNRQIILTRPPDINLPLSAERSPPPQ-PWNSEPCDILDVGLGTQGYETESFLNLPKAGRKCAKRVDSIWGAWFFFSFYFKPALNDKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSADKGFARSHRMQRKHYRGLSNPQCVHGVEVVSTPNLMTLDEDDRKRWIELTGRDLNFTIPTEASDFSSWRNLPNTDFELERPPPPIKNGPNAHPKKLLNGSGLNGSGLNGSGLHLSNHSNGDGLDLSPVSSKKRKDFFPHGNEEECYLAVNPPSDRIPDIEMHPTEPHWLNDFSGVIKSVYGPVTAAKTIYEDEQGYLIIISLPFVDLPSVKVSWRNTLTHGIIKVSCMSTSRKPLIKRHDRTFKLTDPSSEHCPPGEFVREIPLSTRIPEDANIEAYYDGPGSVLEILVPKHRVGPEEHEVRVCLRPHLGGNDLKLT 508
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: M5W493_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004582mg PE=4 SV=1) HSP 1 Score: 818.92 bits (2114), Expect = 0.000e+0 Identity = 406/503 (80.72%), Postives = 444/503 (88.27%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKA-GRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELERPQI-IKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRK------DDDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG SLLT SMENHHPSTLLSMDSSA HDE DL+ NRQ ILS PPDINLPLSAERSPPP WNSD CDILDVGL Q YETES L + K GRKC KRVDSIWGAW FFSFYFKPALNEKSKAKI+RDSNGV+GF+KSDLKLDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF+RSHRMQRKHYRGLSNPQCVHGIELV +PNLI L E++RK+W+ELTGRD+NFTIP+EA DFSSWRNLPNTDFELERP +KN+P+SHS+KLLNGSGLNLSTQ +++ DG DLS VS +R++ DDDCFL V PPSDRIPDMEIH + W N F+GVMK+ +GPVTAAK IYED+AGYLIIISLPFVDLQRVKVSWRNTLTHGIIK+SC+STS MPFIKRH+RTF+LTDP+ EHCPPGEFVREIPLSTRIPEDA+IEAY+DGPGSVLEIMVPKLR+ PEEHE+RVCLRP GNDLMLT Sbjct: 1 MGDSLLTALSMENHHPSTLLSMDSSASSHDELDLEMNRQIILSRPPDINLPLSAERSPPPPP-WNSDPCDILDVGLGPQVYETESLLTIPKVVGRKCAKRVDSIWGAWFFFSFYFKPALNEKSKAKIIRDSNGVNGFEKSDLKLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGIELVRAPNLIGLDEDERKRWVELTGRDVNFTIPMEAGDFSSWRNLPNTDFELERPPAPLKNVPNSHSKKLLNGSGLNLSTQPSNNNNSDGMDLSPVSKRRKEFFPHGNDDDCFLAVNPPSDRIPDMEIHANGSQWPNHFSGVMKNVHGPVTAAKTIYEDDAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCMSTSRMPFIKRHDRTFRLTDPSSEHCPPGEFVREIPLSTRIPEDANIEAYYDGPGSVLEIMVPKLRVGPEEHEVRVCLRPHLGGNDLMLT 502
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A0B2SWQ0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_025356 PE=4 SV=1) HSP 1 Score: 815.839 bits (2106), Expect = 0.000e+0 Identity = 402/504 (79.76%), Postives = 445/504 (88.29%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLST-QSASHTYGDGTDLSLVSNKRRKD-------DDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG S LT+ SMENHHPSTLLSMDSSA H+E DL+ NRQ IL+ PPDINLPLSAERSPPPQ PWNS+ CDILDVGL +Q YETES+L + KAGRKC KRVDSIWGAW FFSFYFKPALN+KSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF RSHRMQRKHYRGLSNPQCVHG+E+V +P+L+ L E+DRK+WIELTGRDLNFTIP EASDFSSWRNLPNTDFELER P IK+ P++H +KLLNGSGLN S ++H+ GDG DLS VS+K+RKD ++C+L V PPSDRIPD+E+HP+EPHWLNDF+GV+KS YGPVTAAK IYEDE GYLIIISLPFVDL VKVSWRNTLTHGIIK+SC+STS P IKRH+RTFKLTDP+ EHCPPGEFVREIPLSTRIPEDA+IEAY+DGPGSVLEI+VPK R+ PEEHE+RVCLRP GNDL LT Sbjct: 1 MGDSCLTSMSMENHHPSTLLSMDSSASSHEELDLEMNRQIILTRPPDINLPLSAERSPPPQ-PWNSEPCDILDVGLGTQGYETESFLNLPKAGRKCAKRVDSIWGAWFFFSFYFKPALNDKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFARSHRMQRKHYRGLSNPQCVHGVEVVSAPSLMTLDEDDRKRWIELTGRDLNFTIPPEASDFSSWRNLPNTDFELERPPPPIKSGPNAHPKKLLNGSGLNGSGLHLSNHSNGDGLDLSPVSSKKRKDFFPHGNEEECYLAVNPPSDRIPDIEMHPTEPHWLNDFSGVIKSVYGPVTAAKTIYEDEQGYLIIISLPFVDLPSVKVSWRNTLTHGIIKVSCMSTSRKPLIKRHDRTFKLTDPSSEHCPPGEFVREIPLSTRIPEDANIEAYYDGPGSVLEILVPKHRVGPEEHEVRVCLRPHLGGNDLKLT 503
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: I1LYT7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 815.839 bits (2106), Expect = 0.000e+0 Identity = 402/504 (79.76%), Postives = 445/504 (88.29%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLST-QSASHTYGDGTDLSLVSNKRRKD-------DDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG S LT+ SMENHHPSTLLSMDSSA H+E DL+ NRQ IL+ PPDINLPLSAERSPPPQ PWNS+ CDILDVGL +Q YETES+L + KAGRKC KRVDSIWGAW FFSFYFKPALN+KSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF RSHRMQRKHYRGLSNPQCVHG+E+V +P+L+ L E+DRK+WIELTGRDLNFTIP EASDFSSWRNLPNTDFELER P IK+ P++H +KLLNGSGLN S ++H+ GDG DLS VS+K+RKD ++C+L V PPSDRIPD+E+HP+EPHWLNDF+GV+KS YGPVTAAK IYEDE GYLIIISLPFVDL VKVSWRNTLTHGIIK+SC+STS P IKRH+RTFKLTDP+ EHCPPGEFVREIPLSTRIPEDA+IEAY+DGPGSVLEI+VPK R+ PEEHE+RVCLRP GNDL LT Sbjct: 1 MGDSCLTSMSMENHHPSTLLSMDSSASSHEELDLEMNRQIILTRPPDINLPLSAERSPPPQ-PWNSEPCDILDVGLGTQGYETESFLNLPKAGRKCAKRVDSIWGAWFFFSFYFKPALNDKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFARSHRMQRKHYRGLSNPQCVHGVEVVSAPSLMTLDEDDRKRWIELTGRDLNFTIPPEASDFSSWRNLPNTDFELERPPPPIKSGPNAHPKKLLNGSGLNGSGLHLSNHSNGDGLDLSPVSSKKRKDFFPHGNEEECYLAVNPPSDRIPDIEMHPTEPHWLNDFSGVIKSVYGPVTAAKTIYEDEQGYLIIISLPFVDLPSVKVSWRNTLTHGIIKVSCMSTSRKPLIKRHDRTFKLTDPSSEHCPPGEFVREIPLSTRIPEDANIEAYYDGPGSVLEILVPKHRVGPEEHEVRVCLRPHLGGNDLKLT 503
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: V7BF37_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G157000g PE=4 SV=1) HSP 1 Score: 806.209 bits (2081), Expect = 0.000e+0 Identity = 395/497 (79.48%), Postives = 440/497 (88.53%), Query Frame = 2 Query: 866 LTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRKD-------DDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLML 2326 L + SMENHHPSTLLSMDSSA H+E DL+ NRQ +LS PPDINLPLSAERSPP QPWNS+ CDILDVGL +Q Y+TES+L KAGRKC KRVDSIWGAW FFSFYFKP+LN+KSKAKIVRDSNGVSGFDK+DLKLDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGE PFPFSVDKGF+RSHRMQRKHYRGLSNPQCVHGIE+V +PNL+ L E+DRK+WIELTGRDLNFTIP EASDFSSWRNLPNTDFELER P IK+ P++HS+KLLNGSGLNLST ++H+ GDG DLS VS+K+RKD ++C+L V PPSDRIPD+E+HPSEPHWLNDF+GV+KS +GPVTAAK IYEDE GYLIIISLPFVDL VKVSWRNTLTHGIIK+SC+S S PFI+RH+RTFKLTDP+ EHCPPGEFVREIPLSTRIPEDA+IEAY+DG GSVLEI+VPK R+ PEEHE+RVCLRP GNDL L Sbjct: 3 LASLSMENHHPSTLLSMDSSASSHEELDLEMNRQIVLSCPPDINLPLSAERSPP-LQPWNSEPCDILDVGLGTQGYDTESFLIPPKAGRKCAKRVDSIWGAWFFFSFYFKPSLNDKSKAKIVRDSNGVSGFDKTDLKLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGECPFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSAPNLMTLDEDDRKRWIELTGRDLNFTIPAEASDFSSWRNLPNTDFELERPPPPIKSGPNAHSKKLLNGSGLNLSTHLSNHSNGDGLDLSPVSSKKRKDFFPHGNEEECYLAVNPPSDRIPDIEMHPSEPHWLNDFSGVIKSVHGPVTAAKTIYEDEQGYLIIISLPFVDLPNVKVSWRNTLTHGIIKVSCMSISRKPFIQRHDRTFKLTDPSLEHCPPGEFVREIPLSTRIPEDANIEAYYDGQGSVLEILVPKHRVGPEEHEVRVCLRPNLGGNDLNL 498
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A068UG72_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_22 OS=Coffea canephora GN=GSCOC_T00023542001 PE=4 SV=1) HSP 1 Score: 786.563 bits (2030), Expect = 0.000e+0 Identity = 393/505 (77.82%), Postives = 435/505 (86.14%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA---HDEFDLDKNRQSILSLPP-DINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRKD-------DDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 M SLLT+ SMENHHPSTLLSMDSSA HDE DL+ NRQ +L PP DINLPLS ER+ P Q WN + CDILDVGL SQ YETE++L V K GRKC KR DSIWGAW FFSFYF+P LNEKSKAKI RD NG+SGFDKSDL+LDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF RSHRMQRKHYRGLSNPQCVHGIE+VPSPNL+ L E++RK+W ELTGRD+NFTIP EASD+ SWRNLP+T+FELER P IIKN HS S+KLLNGSGLNLSTQ +SH+ GD DLS VS KRRKD +DC+L V PP DRIPD+E HP+EPHWLN+F+GV++ YGPVTAAK+IYEDE GYLIIISLPFVDLQRVKVSWRNTLTHGIIK+SC+STS MPFIKR +RTFKLTDP+ EHCPPGEF+REIPLSTRIPEDA+IEAY+DG G+VLEI+VPKLR PEEHE+RVCLRP GNDLMLT Sbjct: 1 MVDSLLTSLSMENHHPSTLLSMDSSASSSHDELDLEMNRQVVLPRPPPDINLPLSTERNSP--QSWNPEHCDILDVGLGSQMYETETFLTVPKVGRKCAKRGDSIWGAWFFFSFYFRPVLNEKSKAKITRDGNGLSGFDKSDLQLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFGRSHRMQRKHYRGLSNPQCVHGIEVVPSPNLLGLDEDERKRWAELTGRDINFTIPHEASDYGSWRNLPSTEFELERPPAIIKNNSHSQSKKLLNGSGLNLSTQPSSHSNGDSMDLSPVSGKRRKDFFSHGNEEDCYLTVNPP-DRIPDLETHPNEPHWLNEFSGVLRHVYGPVTAAKSIYEDEEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRMPFIKRLDRTFKLTDPSSEHCPPGEFIREIPLSTRIPEDANIEAYYDGTGTVLEILVPKLREGPEEHEVRVCLRPHFAGNDLMLT 502
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A072VWG6_MEDTR (HSP20-like chaperone superfamily protein OS=Medicago truncatula GN=MTR_1g069065 PE=4 SV=1) HSP 1 Score: 781.941 bits (2018), Expect = 0.000e+0 Identity = 387/510 (75.88%), Postives = 428/510 (83.92%), Query Frame = 2 Query: 881 MENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELERP-QIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRKD------------------------DDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MENHHPSTLLSMDSSA H+E DL+ NRQ ILS PPDINLPLSAERSPPPQ WNSD CDILDVGL +Q YETE++L + K GRKC KRVDSIWGAW FFSFYFKPALN+KSKAKIVRD NG+SGF+KSDL LDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF+RSHRMQRKHYRGLSNPQCVHGIEL PSPNL+ L E+DRK+WIELTGRDL+FT+P EASDF SWRNLPNTDFELERP IK+ + H +KLLNGSGLNLST A+HT GD DLS + K+RKD ++C+L V PPS+RI D+E+HPSEPHWL+DF+GV+K+ YGPVTAAK IYEDE GYLIIISLPFVDL VKVSWRNTLTHGIIK+SC+STS PFIKR +RTFKLTD + EHCPPGEFVREI LSTRIPEDA++EAY+D PGSVLEIMVPK R+ PEEHE+RVCLRP GNDLMLT Sbjct: 1 MENHHPSTLLSMDSSASSHEELDLEMNRQIILSRPPDINLPLSAERSPPPQS-WNSDPCDILDVGLGTQGYETETFLTLPKVGRKCAKRVDSIWGAWFFFSFYFKPALNDKSKAKIVRDGNGISGFEKSDLNLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGIELFPSPNLMNLDEDDRKRWIELTGRDLSFTVPPEASDFGSWRNLPNTDFELERPLPSIKSAANGHPKKLLNGSGLNLSTPLANHTNGDLLDLSSANGKKRKDFFPHANGNGNFPHGSGNGNVNGNEEECYLAVNPPSERIQDIEMHPSEPHWLHDFSGVIKNVYGPVTAAKTIYEDEQGYLIIISLPFVDLASVKVSWRNTLTHGIIKVSCMSTSRKPFIKRRDRTFKLTDASSEHCPPGEFVREISLSTRIPEDANLEAYYDEPGSVLEIMVPKHRVGPEEHEVRVCLRPHLGGNDLMLT 509
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A0B2P495_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_002453 PE=4 SV=1) HSP 1 Score: 781.171 bits (2016), Expect = 0.000e+0 Identity = 382/499 (76.55%), Postives = 431/499 (86.37%), Query Frame = 2 Query: 857 ASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRK-----DDDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 +SLLT SMENHHPSTLLSMDSSA H+E DL+ N Q ILS PPDINLPLSAERSPPPQ PWNSD CDILDVGL +Q YETE++L + KAGRKCTKRVDSIWGAW FF FYFKP L+EKSKAK++RDS G SGFDK+DL LDVFMVQHDMENMYMWVFK +PENALGKMQLRSYMNGHSRQGERPFPFS +KGF+RSHRMQRKHYRGLSNPQCVHGIE+VPSPNL+ L ++++K+W+ELTGRDLNFTIP EASDFSSWRNLPNTDFELER P IK+ P+SH +KLLNG+ LNLS +H+ GD DLS V+ K+RK D+D +L V PSDR+PD+++ PSE WLNDF+GVMK+ GPVTAAK IYEDE GY+I+ISLP VDL VKVSWRNTLTHGIIK+SC+STSG P+IKRH+RTFKLTDP+ EHCPPGEFVREIPLS RIPEDA+IEAY+DGPGSVLEIMVPKLR+ EEHE+RVCLRP GNDLMLT Sbjct: 4 SSLLTCLSMENHHPSTLLSMDSSASSHEELDLEMNTQIILSRPPDINLPLSAERSPPPQ-PWNSDPCDILDVGLGTQGYETETFLNIPKAGRKCTKRVDSIWGAWFFFRFYFKPVLHEKSKAKVIRDSTGFSGFDKTDLNLDVFMVQHDMENMYMWVFKGRPENALGKMQLRSYMNGHSRQGERPFPFSAEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVPSPNLMGLDKDEQKRWMELTGRDLNFTIPPEASDFSSWRNLPNTDFELERPPHPIKSAPNSHPKKLLNGTVLNLS----NHSNGDAIDLSPVNGKKRKELFLNDEDYYLSVNAPSDRVPDIDMQPSEHPWLNDFSGVMKNVRGPVTAAKTIYEDEEGYMIVISLPCVDLSSVKVSWRNTLTHGIIKVSCVSTSGKPYIKRHDRTFKLTDPSSEHCPPGEFVREIPLSARIPEDANIEAYYDGPGSVLEIMVPKLRVGSEEHEVRVCLRPHLGGNDLMLT 497
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: I1N9Z0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 781.171 bits (2016), Expect = 0.000e+0 Identity = 382/499 (76.55%), Postives = 431/499 (86.37%), Query Frame = 2 Query: 857 ASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRK-----DDDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 +SLLT SMENHHPSTLLSMDSSA H+E DL+ N Q ILS PPDINLPLSAERSPPPQ PWNSD CDILDVGL +Q YETE++L + KAGRKCTKRVDSIWGAW FF FYFKP L+EKSKAK++RDS G SGFDK+DL LDVFMVQHDMENMYMWVFK +PENALGKMQLRSYMNGHSRQGERPFPFS +KGF+RSHRMQRKHYRGLSNPQCVHGIE+VPSPNL+ L ++++K+W+ELTGRDLNFTIP EASDFSSWRNLPNTDFELER P IK+ P+SH +KLLNG+ LNLS +H+ GD DLS V+ K+RK D+D +L V PSDR+PD+++ PSE WLNDF+GVMK+ GPVTAAK IYEDE GY+I+ISLP VDL VKVSWRNTLTHGIIK+SC+STSG P+IKRH+RTFKLTDP+ EHCPPGEFVREIPLS RIPEDA+IEAY+DGPGSVLEIMVPKLR+ EEHE+RVCLRP GNDLMLT Sbjct: 4 SSLLTCLSMENHHPSTLLSMDSSASSHEELDLEMNTQIILSRPPDINLPLSAERSPPPQ-PWNSDPCDILDVGLGTQGYETETFLNIPKAGRKCTKRVDSIWGAWFFFRFYFKPVLHEKSKAKVIRDSTGFSGFDKTDLNLDVFMVQHDMENMYMWVFKGRPENALGKMQLRSYMNGHSRQGERPFPFSAEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVPSPNLMGLDKDEQKRWMELTGRDLNFTIPPEASDFSSWRNLPNTDFELERPPHPIKSAPNSHPKKLLNGTVLNLS----NHSNGDAIDLSPVNGKKRKELFLNDEDYYLSVNAPSDRVPDIDMQPSEHPWLNDFSGVMKNVRGPVTAAKTIYEDEEGYMIVISLPCVDLSSVKVSWRNTLTHGIIKVSCVSTSGKPYIKRHDRTFKLTDPSSEHCPPGEFVREIPLSARIPEDANIEAYYDGPGSVLEIMVPKLRVGSEEHEVRVCLRPHLGGNDLMLT 497 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097352 ID=g.barbadense_cottongen_reftransV1_0097352; Name=g.barbadense_cottongen_reftransV1_0097352; organism=Gossypium barbadense; type=contig; length=2593bpback to top |