g.barbadense_cottongen_reftransV1_0097313, g.barbadense_cottongen_reftransV1_0097313 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: HSD_MYCTO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=fabG3 PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 2.158e-17 Identity = 57/153 (37.25%), Postives = 84/153 (54.90%), Query Frame = -2 Query: 897 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAG--TMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1349 R+IGKVA+V+GGARG+GA+ + GA VV DILDE G + ARY+H DV + + +A+ A+T G L +L +NAGI +I + + + ++ +NL G I+ M +GSII SS G+ G +A H Y+ Sbjct: 4 RLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYT 154 HSP 2 Score: 51.2174 bits (121), Expect = 2.158e-17 Identity = 37/111 (33.33%), Postives = 56/111 (50.45%), Query Frame = -3 Query: 569 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSF 901 T +K + GL ++ A ELG GIRVN I P V T M + PE++ Q +L G+AA +V+ V+LASD++ + T V+DGG + ++ F Sbjct: 154 TATKFAVRGLTKSTALELGPGGIRVNSIHPGLVKTPM----------TDWVPEDIF-----QTAL--GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAGLAHNDF 247
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: YKVO_BACSU (Uncharacterized oxidoreductase YkvO OS=Bacillus subtilis (strain 168) GN=ykvO PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 2.179e-17 Identity = 47/133 (35.34%), Postives = 65/133 (48.87%), Query Frame = -2 Query: 900 FAENGAYVVIA----DILDEAGTMLANSIGARY--IHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPY 1280 F GAYV I + LD+A N IG + D++K D++ + KGKLDILF+NAGI G + + EQV IN+ G + ++ A L + GSII T S+AG +G A Y Sbjct: 26 FVNEGAYVYITGRRQNELDKA----VNQIGKNVTGVQGDISKLEDLDKLYDIIKQEKGKLDILFANAGI-GNFLPLGEITEEQVDRTFDINVKGTIFTVQKA--LSLFPDKVGSIIVTGSTAGSIGNPAFSVY 151 HSP 2 Score: 51.9878 bits (123), Expect = 2.179e-17 Identity = 37/99 (37.37%), Postives = 51/99 (51.52%), Query Frame = -3 Query: 599 SKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGG 895 SKA + L+R +L IRVN +SP G+ L Y G EEV L + ++ GK T E+VA A FLASD++ ++T L +DGG Sbjct: 154 SKAALRALVRNWILDLKGTEIRVNVVSPGGI----LTPAYDELFGDAL--EEV--LENSRNTVPAGKVGTPEEVANAVSFLASDESSYLTGVELFVDGG 244
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=fabG2 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 3.806e-17 Identity = 42/132 (31.82%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 897 FAENGAYVVIADILDEAGTMLANSIG----ARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1280 F GA VV+ D+ EA + A +G A + CDV + DV+ I+ A+ G LD++ +NAGI A ++ ++ EQ +++++L G + + AA A++R +G+I+ SS +G +G + YS Sbjct: 27 FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDA-TMRTMTEEQFDQVIAVHLKGTWNGTRLAA-AIMRERKRGAIVNMSSVSGKVGMVGQTNYS 156 HSP 2 Score: 50.447 bits (119), Expect = 3.806e-17 Identity = 37/101 (36.63%), Postives = 53/101 (52.48%), Query Frame = -3 Query: 599 SKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEV--KKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGG 895 +KAGIVG+ + AA EL GIRVN I+P + + M E P+ + +KL + G+A +VA AVFLASD + ++T L + GG Sbjct: 158 AKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAM----------TEAMPQRIWDQKL----AEVPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGG 244
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=fabG2 PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 3.806e-17 Identity = 42/132 (31.82%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 897 FAENGAYVVIADILDEAGTMLANSIG----ARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1280 F GA VV+ D+ EA + A +G A + CDV + DV+ I+ A+ G LD++ +NAGI A ++ ++ EQ +++++L G + + AA A++R +G+I+ SS +G +G + YS Sbjct: 27 FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDA-TMRTMTEEQFDQVIAVHLKGTWNGTRLAA-AIMRERKRGAIVNMSSVSGKVGMVGQTNYS 156 HSP 2 Score: 50.447 bits (119), Expect = 3.806e-17 Identity = 37/101 (36.63%), Postives = 53/101 (52.48%), Query Frame = -3 Query: 599 SKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEV--KKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGG 895 +KAGIVG+ + AA EL GIRVN I+P + + M E P+ + +KL + G+A +VA AVFLASD + ++T L + GG Sbjct: 158 AKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAM----------TEAMPQRIWDQKL----AEVPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGG 244
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTO (Uncharacterized oxidoreductase MT1393 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=fabG2 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 3.806e-17 Identity = 42/132 (31.82%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 897 FAENGAYVVIADILDEAGTMLANSIG----ARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1280 F GA VV+ D+ EA + A +G A + CDV + DV+ I+ A+ G LD++ +NAGI A ++ ++ EQ +++++L G + + AA A++R +G+I+ SS +G +G + YS Sbjct: 27 FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDA-TMRTMTEEQFDQVIAVHLKGTWNGTRLAA-AIMRERKRGAIVNMSSVSGKVGMVGQTNYS 156 HSP 2 Score: 50.447 bits (119), Expect = 3.806e-17 Identity = 37/101 (36.63%), Postives = 53/101 (52.48%), Query Frame = -3 Query: 599 SKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEV--KKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGG 895 +KAGIVG+ + AA EL GIRVN I+P + + M E P+ + +KL + G+A +VA AVFLASD + ++T L + GG Sbjct: 158 AKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAM----------TEAMPQRIWDQKL----AEVPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGG 244
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A0A0D2QED8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G169700 PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 4.394e-139 Identity = 173/217 (79.72%), Postives = 175/217 (80.65%), Query Frame = -2 Query: 894 MFDFLVYAMEQGVDKHVDLQNSSAKRLVPMATSIASLTNDLFTASCSMNLIYLNSK*IPLFFFFCRMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1544 MF FLVYAMEQGVDKHVDLQNSSAKR MIGKVAVVTGGARGIGAATAKLFAENGAYVVIADILDEAGTMLA+SIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA AMLRCNTKGSIICTSSSAGIMGGLASHPYS+ Sbjct: 1 MFAFLVYAMEQGVDKHVDLQNSSAKR----------------------------------------MIGKVAVVTGGARGIGAATAKLFAENGAYVVIADILDEAGTMLADSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAARAMLRCNTKGSIICTSSSAGIMGGLASHPYSL 177 HSP 2 Score: 229.95 bits (585), Expect = 4.394e-139 Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRG ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNL+IDGGYTSAISSLSFIY Sbjct: 176 SLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGNETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLIIDGGYTSAISSLSFIY 288
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A0A061E8G3_THECC (Alcohol dehydrogenase OS=Theobroma cacao GN=TCM_011172 PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.182e-109 Identity = 144/209 (68.90%), Postives = 153/209 (73.21%), Query Frame = -2 Query: 894 MEQGVDKHVDLQNSSAKRLVPMATSIASLTNDLFTASCSMNLIYLNSK*IPLFFFFCRMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1520 ME GVDKH +QN SAKRL IGKVAV+TGGARGIGAA AKLFAENGAYVVIADILDE G MLA SIGARYIHCDVAKE DVESAIQLA+TWKG+LDILFSNAGIGG A SITS+DMEQVKHL+SINLLGNVH IKHAA AML+ TKGSIICTSSSAG+MGGLASH YS+ Sbjct: 1 MELGVDKHDHVQNLSAKRL----------------------------------------IGKVAVITGGARGIGAAAAKLFAENGAYVVIADILDELGAMLAESIGARYIHCDVAKEDDVESAIQLALTWKGQLDILFSNAGIGGPAGSITSIDMEQVKHLISINLLGNVHGIKHAARAMLKHRTKGSIICTSSSAGVMGGLASHIYSL 169 HSP 2 Score: 191.43 bits (485), Expect = 1.182e-109 Identity = 87/113 (76.99%), Postives = 103/113 (91.15%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSKA I+GLMRTAACELGVHGIRVNCISPH VP+D+L+S YR+F G ET PE+V KLVG+ GSLLRG+AATVEDVAQAA+FLAS+D GFITAHNLV+DGG+TS+ ++LSFIY Sbjct: 168 SLSKAAIIGLMRTAACELGVHGIRVNCISPHAVPSDLLVSAYRIFLGNETRPEQVSKLVGETGSLLRGRAATVEDVAQAALFLASEDAGFITAHNLVLDGGFTSSCNTLSFIY 280
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: V4U5U0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016207mg PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 3.914e-91 Identity = 109/152 (71.71%), Postives = 131/152 (86.18%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R++GKVA++TGGARGIGAATAKLFAENGA++VIADILDE G LA++IG RYIHCDV KE DVESA++LA++WKG+LDI+F+NAGI G+ SITSL+ME VK L+S+NL G +H IKHAA AM+ KGSIICTSSSA IMGGLASH YS+ Sbjct: 14 RLMGKVALITGGARGIGAATAKLFAENGAHIVIADILDELGAALADTIGGRYIHCDVTKEEDVESAVRLAVSWKGRLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL 165 HSP 2 Score: 172.17 bits (435), Expect = 3.914e-91 Identity = 78/114 (68.42%), Postives = 98/114 (85.96%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSK I+GL R+ ACELG HGIRVNCISPHGVP++ML++ YR + GK + PEEV K+VG+ GSLLRG++A++EDVAQAA+FLAS++ GFITAHNLVIDGGYT+ SS+SFIY Sbjct: 164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVSKMVGESGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIY 277
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A5BAM4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025196 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 2.601e-90 Identity = 102/152 (67.11%), Postives = 130/152 (85.53%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R++GKVA++TGGARGIGAATAKLFA +GA+V+IAD+LD G LA+SIG RYIHCDVAKE D+ESA+QLA+TWKG+LDI+F+NAGIGG S+T++DM ++K L+++N+ GN+H IKHAA AM+R G IICTSSSA IMGGLASH Y++ Sbjct: 18 RLLGKVAIITGGARGIGAATAKLFARHGAHVIIADVLDHLGFTLADSIGGRYIHCDVAKEDDMESAVQLALTWKGQLDIMFNNAGIGGLDGSVTNIDMTKMKALLAVNVNGNIHGIKHAARAMIRGRKGGCIICTSSSAAIMGGLASHGYTL 169 HSP 2 Score: 179.104 bits (453), Expect = 2.601e-90 Identity = 84/114 (73.68%), Postives = 99/114 (86.84%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 TLSK IVGLMR+ ACELGVHGIRVNCISPHGVPT+ML+SGYR GK + TPEEV ++VG +GSLLRG+ +VED+AQAA+FLAS+D GFITAHNLV+DGG+TSA S +SFIY Sbjct: 168 TLSKEAIVGLMRSTACELGVHGIRVNCISPHGVPTEMLVSGYRKILGKADVTPEEVSRIVGKRGSLLRGRGGSVEDIAQAALFLASEDAGFITAHNLVLDGGFTSACSDMSFIY 281
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: F6GVL2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0137g00030 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 3.201e-90 Identity = 102/152 (67.11%), Postives = 130/152 (85.53%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R++GKVA++TGGARGIGAATAKLFA +GA+V+IAD+LD G LA+SIG RYIHCDVAKE D+ESA+QLA+TWKG+LDI+F+NAGIGG S+T++DM ++K L+++N+ GN+H IKHAA AM+R G IICTSSSA IMGGLASH Y++ Sbjct: 21 RLLGKVAIITGGARGIGAATAKLFARHGAHVIIADVLDHLGFTLADSIGGRYIHCDVAKEDDMESAVQLALTWKGQLDIMFNNAGIGGLDGSVTNIDMTKMKALLAVNVNGNIHGIKHAARAMIRGRKGGCIICTSSSAAIMGGLASHGYTL 172 HSP 2 Score: 179.104 bits (453), Expect = 3.201e-90 Identity = 84/114 (73.68%), Postives = 99/114 (86.84%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 TLSK IVGLMR+ ACELGVHGIRVNCISPHGVPT+ML+SGYR GK + TPEEV ++VG +GSLLRG+ +VED+AQAA+FLAS+D GFITAHNLV+DGG+TSA S +SFIY Sbjct: 171 TLSKEAIVGLMRSTACELGVHGIRVNCISPHGVPTEMLVSGYRKILGKADVTPEEVSRIVGKRGSLLRGRGGSVEDIAQAALFLASEDAGFITAHNLVLDGGFTSACSDMSFIY 284
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A0A067F604_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023708mg PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.877e-90 Identity = 110/152 (72.37%), Postives = 130/152 (85.53%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R+ GKVAV+TGGARGIGAATAKLFAENGA++VIADILDE G LA++IG RYIHCDV KE DVESA++LA++WKG+LDI+F+NAGI G+ SITSL+ME VK L+S+NL G +H IKHAA AM+ KGSIICTSSSA IMGGLASH YS+ Sbjct: 14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL 165 HSP 2 Score: 169.859 bits (429), Expect = 6.877e-90 Identity = 78/114 (68.42%), Postives = 97/114 (85.09%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSK I+GL R+ ACELG HGIRVNCISPHGVP++ML++ YR + GK + PEEV K+V D GSLLRG++A++EDVAQAA+FLAS++ GFITAHNLVIDGGYT+ SS+SFIY Sbjct: 164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIY 277
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A0A067KQ21_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04845 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 4.305e-88 Identity = 87/130 (66.92%), Postives = 105/130 (80.77%), Query Frame = -2 Query: 897 KLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1286 K FAENGA VVIADILDE G LA+SIG +YIHC+V E+DVE+AI LA+ WKGK+DI+F+NAGI G SIT+LDM+QVK+L S+N+ G H IKHAA AM++ T+G IICTSSSA IMGGL SHPY+ Sbjct: 39 KTFAENGASVVIADILDELGGSLADSIGGKYIHCNVVNEADVEAAINLALAWKGKIDIMFNNAGIAGPGGSITNLDMQQVKNLFSVNVGGIFHGIKHAAAAMIKARTEGCIICTSSSAAIMGGLGSHPYT 168 HSP 2 Score: 172.555 bits (436), Expect = 4.305e-88 Identity = 82/114 (71.93%), Postives = 99/114 (86.84%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKE-TTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 T SK I+GLM+++ACELGV+GIRVNCISPHGVP+DML++ YR GKE PEEV K+VG+ GSLLRGK A+VEDVAQAA+FLAS+++ FITAHNLVIDGGYTSA S++SFIY Sbjct: 168 TSSKEAILGLMKSSACELGVYGIRVNCISPHGVPSDMLVNAYRRILGKEDMQPEEVSKIVGESGSLLRGKCASVEDVAQAALFLASEESRFITAHNLVIDGGYTSANSNMSFIY 281
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: B9S7B8_RICCO (Short chain alcohol dehydrogenase, putative OS=Ricinus communis GN=RCOM_0775930 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.488e-88 Identity = 108/151 (71.52%), Postives = 125/151 (82.78%), Query Frame = -2 Query: 897 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1349 R+ GKVAVVTGGARGIGAATAK FAENGA VV+ADILD+ G LA+SIG RYIHCDVA E+DVESAI LA+ WKGKLDI+F+NAGI G SIT+LDMEQVK+L S+N+ G +H IKHAA AM++ G IIC+SSSA IMGGL SHPY+ Sbjct: 18 RLRGKVAVVTGGARGIGAATAKRFAENGANVVVADILDDLGHPLADSIGGRYIHCDVANEADVESAINLALAWKGKLDIMFNNAGIAGPDGSITNLDMEQVKYLFSVNVNGTLHGIKHAAKAMIKGQNGGCIICSSSSAAIMGGLGSHPYT 168 HSP 2 Score: 169.859 bits (429), Expect = 4.488e-88 Identity = 80/114 (70.18%), Postives = 98/114 (85.96%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 T SK IVGLM++ ACELGVHGIRVNCISPHGVP++ML+ YR GK + EEV K+VG++GSLLRG+ ATVEDVAQAA+FLAS+++GFITAHNLVIDGGYTSA ++++FIY Sbjct: 168 TSSKEAIVGLMKSTACELGVHGIRVNCISPHGVPSEMLVGAYRRILGKADMNSEEVSKIVGERGSLLRGRCATVEDVAQAALFLASEESGFITAHNLVIDGGYTSANNNMNFIY 281
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: B9HJM3_POPTR (Alcohol dehydrogenase family protein OS=Populus trichocarpa GN=POPTR_0008s14120g PE=3 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 9.628e-87 Identity = 89/131 (67.94%), Postives = 106/131 (80.92%), Query Frame = -2 Query: 894 KLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1286 K+FAENGA V+IADILD+ GT LA+SIG RYIHCDV E+DVESAI LA+ WKGKLDI+F+NAGI GT SIT+LDMEQV +L+S+N+ G +H IKHAA M++ G IIC SSSA IMGGL SHPYS+ Sbjct: 20 KVFAENGASVIIADILDDLGTSLADSIGGRYIHCDVVNEADVESAINLALAWKGKLDIMFNNAGISGTEGSITNLDMEQVNYLLSVNVNGILHGIKHAARVMIKGQKGGCIICMSSSAAIMGGLGSHPYSL 150 HSP 2 Score: 165.622 bits (418), Expect = 9.628e-87 Identity = 76/114 (66.67%), Postives = 98/114 (85.96%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSK I+GLMR+ ACELGVHGIRVNCISPHGV ++ML+ YR GK + TPEEV K+VG++GSLL+G++ ++EDVAQA +FLAS++ G+ITAHNLVIDGG+TSA S++SFIY Sbjct: 149 SLSKEAIIGLMRSTACELGVHGIRVNCISPHGVASEMLVGAYRKVLGKKDMTPEEVSKIVGERGSLLKGRSPSLEDVAQAVMFLASEEAGYITAHNLVIDGGFTSASSNMSFIY 262
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: W9SHG0_9ROSA (Momilactone A synthase OS=Morus notabilis GN=L484_015124 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 7.802e-86 Identity = 105/153 (68.63%), Postives = 133/153 (86.93%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGG-TASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R+ GK+AV+TGGARGIGAATAK+FA+NGA+V+IADILD+ G LA+SIG RYIHCDV KESDVESA++LA+ WKG+LDI+F+NAGI G T SITSLDM++VK+L+S+N+LG +H K+A+ AM++ KGSIICTSSSAGIMGGL SH Y++ Sbjct: 20 RLAGKIAVITGGARGIGAATAKVFAQNGAHVIIADILDDLGATLADSIGGRYIHCDVTKESDVESAVELALKWKGQLDIMFNNAGISGPTGGSITSLDMDKVKNLLSVNVLGILHGTKYASRAMIKGKNKGSIICTSSSAGIMGGLGSHGYTL 172 HSP 2 Score: 161.77 bits (408), Expect = 7.802e-86 Identity = 77/114 (67.54%), Postives = 94/114 (82.46%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 TLSK I GL+R+ ACELGVHGIRVN ISPHGVPT+ML+ +R F GK + EEV K+VG++GSLLRG+ T +DVA AA+FLASDD+ F+TAHNLV+DGGYTSA S++SFIY Sbjct: 171 TLSKEAINGLVRSVACELGVHGIRVNSISPHGVPTEMLVGAFRKFVGKVDIKAEEVGKIVGERGSLLRGRGGTADDVAMAALFLASDDSAFVTAHNLVVDGGYTSADSNMSFIY 284 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097313 ID=g.barbadense_cottongen_reftransV1_0097313; Name=g.barbadense_cottongen_reftransV1_0097313; organism=Gossypium barbadense; type=contig; length=1977bpback to top |