g.barbadense_cottongen_reftransV1_0097272, g.barbadense_cottongen_reftransV1_0097272 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_CANAL (COP9 signalosome complex subunit 5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RRI1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 2.544e-59 Identity = 93/162 (57.41%), Postives = 117/162 (72.22%), Query Frame = -2 Query: 1013 FYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQ---AGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 1489 FY A + +KPW D +YF + IS+LAL+KM HA++GG+IE+MG++ GK G +IIVMD + LPVEGTETRVNAQ +AY YMV+Y +Q EN+VGWYH HP YGCWL GIDVSTQ LNQ Q+P+LA+V+DP +T+ GKVEIGAFR Sbjct: 49 FYRLPAMDPIARDKKPWKQDVNYFNKCYISSLALMKMCTHAQTGGSIEIMGMLVGKISGHSIIVMDTYRLPVEGTETRVNAQNEAYTYMVEYLTERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVVDPVKTLKQGKVEIGAFR 210
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_ASHGO (COP9 signalosome complex subunit 5 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRI1 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.324e-55 Identity = 94/196 (47.96%), Postives = 133/196 (67.86%), Query Frame = -2 Query: 884 AQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFK 1471 +Q + QQE W DP YF++ +SALA +K++ HA GG +EV+G++ G + I+V+D++ LPVEGTETRVNAQ ++YEY V Y +T G +VGWYHSHPGYGCWLSGID TQ LNQ FQ+P+LA+V+DP R+ ++G ++IGAFRT PE +S + + +G H +YY L+++YF+ Sbjct: 54 SQVRVQQEL-WKQDPTYFQKAALSALACMKILRHAFDGGDMEVLGMLLGYVQDEMIVVVDSYRLPVEGTETRVNAQMESYEYTVQYLETAVPEGLA--IVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDPKRSKASGVIDIGAFRTMPETAD--TRSVSSH-----SNASRYGHHSARYYELEVSYFE 239
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_KLULA (COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RRI1 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.576e-49 Identity = 90/201 (44.78%), Postives = 125/201 (62.19%), Query Frame = -2 Query: 854 PWAND----PHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDL 1444 P+A D P +F++ IS LA KM+ HA GG IEVMG++ G T D I+V D ++LPV+GTETRVNA ++YEYMV Y + + + +VGWYHSHPGYGCWLS ID+ TQ LNQ +Q+P+LA+V+DP +++S ++IGAFRT P +D H YY L+I +++SLD ++ L Sbjct: 51 PYATDLKRNPCHFQKCLISRLATTKMLSHAVDGGDIEVMGMLVGYTSNDMIVVKDCYSLPVQGTETRVNAHMESYEYMVQY--LDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPKKSLSGNTLDIGAFRTLPS--------------------KDNNEHV-DYYPLNIQLYQNSLDVNISKL 228
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_CANGA (COP9 signalosome complex subunit 5 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RRI1 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.886e-44 Identity = 82/176 (46.59%), Postives = 112/176 (63.64%), Query Frame = -2 Query: 935 NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY--SQTNKQAGRLE---NVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTI----PLNKIED 1435 N P +++ V +S LA K++ HA GG IEVMG++ G G+ ++ D F LPVEGTET VNA ++YEYMV + + R E N++GWYHSHPGY CWLS ID+ TQ LNQQ Q+P+LA+V+DP ++ + KV IG+FRTY + + D E T LNK+E+ Sbjct: 66 NSPLFYQNVLLSKLACSKILCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDPHKSKNDQKVRIGSFRTYQD--QNDDTNFYELNTTVFDSELNKLEN 239
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Match: CSN5_YEAS1 (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RRI1 PE=3 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 3.718e-40 Identity = 85/206 (41.26%), Postives = 116/206 (56.31%), Query Frame = -2 Query: 833 FKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY-----SQTNKQAGR-----LENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWV 1420 + V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y + + GR NVVGW+HSHPGY CWLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT K D+ + YY L+ F S L+ L + N + V Sbjct: 68 YTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRTIES--KSDDNSAT------------------SYYELETIIFDSELNRALFETKLNLHCV 253
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0D2TKS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G068200 PE=4 SV=1) HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = -2 Query: 521 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET Sbjct: 1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 352
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0B0P622_GOSAR (COP9 signalosome complex subunit 5b-like protein OS=Gossypium arboreum GN=F383_08736 PE=4 SV=1) HSP 1 Score: 736.487 bits (1900), Expect = 0.000e+0 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = -2 Query: 521 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET Sbjct: 1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 352
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0D2QAH3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G068200 PE=4 SV=1) HSP 1 Score: 728.013 bits (1878), Expect = 0.000e+0 Identity = 350/352 (99.43%), Postives = 350/352 (99.43%), Query Frame = -2 Query: 521 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET Sbjct: 1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK--EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 350
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0D2UHF5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G068200 PE=4 SV=1) HSP 1 Score: 717.998 bits (1852), Expect = 0.000e+0 Identity = 346/352 (98.30%), Postives = 346/352 (98.30%), Query Frame = -2 Query: 521 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK LAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET Sbjct: 1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK------LAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 346
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A061GQ34_THECC (COP9-signalosome 5B OS=Theobroma cacao GN=TCM_036813 PE=4 SV=1) HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0 Identity = 337/351 (96.01%), Postives = 343/351 (97.72%), Query Frame = -2 Query: 524 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIE 1576 MDSAIAQK WELENNILTV+TPDPSSDSIFYYD AQ KFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLG+GDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK +EESQLAKITRDSAKITVEQV GLMSQVIKDILFNSVRQS+R +ND SGPEPM+E Sbjct: 1 MDSAIAQKRWELENNILTVDTPDPSSDSIFYYDGPAQTKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGSGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKK-EEESQLAKITRDSAKITVEQVDGLMSQVIKDILFNSVRQSNRCRNDHSGPEPMVE 350
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: B9SPP1_RICCO (Jun activation domain binding protein, putative OS=Ricinus communis GN=RCOM_0204710 PE=4 SV=1) HSP 1 Score: 684.871 bits (1766), Expect = 0.000e+0 Identity = 327/358 (91.34%), Postives = 341/358 (95.25%), Query Frame = -2 Query: 521 SAIAQKTWELENNILTVETP-------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570 S IAQKTWELENNI+TV+TP DPSSD+IFYYDE AQ KFQQ++PW+NDPHYF+RVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDP+SEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSR GPL PP++K +EESQL KITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRS+ + SGPEPM+ET Sbjct: 10 SVIAQKTWELENNIITVDTPPTTNSTADPSSDAIFYYDEPAQVKFQQDRPWSNDPHYFRRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPPQRKKEEESQLTKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSRAEGSGPEPMVET 367
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: F6I0N0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g04360 PE=4 SV=1) HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0 Identity = 324/351 (92.31%), Postives = 338/351 (96.30%), Query Frame = -2 Query: 521 SAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1570 ++IAQKTWELENNI +++ P SDSIF+YD+AAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGG IEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDP+SEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSR GPL P ++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS+RS+ + SGPEPMIET Sbjct: 10 ASIAQKTWELENNIASMDAPSADSDSIFFYDDAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGNIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPSQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSNRSRTEPSGPEPMIET 360
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A0D2TEX3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G068200 PE=4 SV=1) HSP 1 Score: 679.863 bits (1753), Expect = 0.000e+0 Identity = 327/334 (97.90%), Postives = 328/334 (98.20%), Query Frame = -2 Query: 575 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVR 1576 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQV +LF R Sbjct: 1 MDSAIAQKTWELENNILTVETPDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPLGPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVT--LLFQIFR 332
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A067KNQ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07015 PE=4 SV=1) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 324/356 (91.01%), Postives = 338/356 (94.94%), Query Frame = -2 Query: 521 IAQKTWELENNILTVET-------PDPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL-GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1564 IAQKTWELENNI+TV+T D SSD+IFYYDE AQAKFQQ+KPWANDPHYF+RVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMV+YSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDP+SEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSR GPL P ++K +EESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVR SSRS+ + SGPEPM+E+ Sbjct: 11 IAQKTWELENNIITVDTSPTTNSTADASSDAIFYYDETAQAKFQQDKPWANDPHYFRRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVEYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPSQRKKEEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRPSSRSRTEGSGPEPMVES 366
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Match: A0A067FIQ9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018085mg PE=4 SV=1) HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0 Identity = 322/361 (89.20%), Postives = 339/361 (93.91%), Query Frame = -2 Query: 521 MDSAIAQKTWELENNILTVETP-------DPSSDSIFYYDEAAQAKFQQEKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRIGPL--GPPRKKLQEESQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSSRSQNDQSGPEPMIET 1576 MDS+IAQKTWELENNI+++ETP +SD+IF+YDE AQ KFQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPD+PISEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL+HSR GPL PPR+K QE+SQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS+++ + S PEPMIE+ Sbjct: 1 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAEPSDPEPMIES 361 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097272 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097272 ID=g.barbadense_cottongen_reftransV1_0097272; Name=g.barbadense_cottongen_reftransV1_0097272; organism=Gossypium barbadense; type=contig; length=1847bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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